Metagenome / Metatranscriptome Family F061759

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F061759
Family Type	Metagenome / Metatranscriptome
Number of Sequences	131
Average Sequence Length	66 residues
Representative Sequence	MAYQRPSQRELAAARKVVRQGEMDRAIAEGRLTVRTMTAQERAESDARWAAAAKARARGRKTARYR
Number of Associated Samples	99
Number of Associated Scaffolds	131

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	71.54 %
% of genes near scaffold ends (potentially truncated)	35.88 %
% of genes from short scaffolds (< 2000 bps)	84.73 %
Associated GOLD sequencing projects	88
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.50

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (54.962 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere (7.634 % of family members)
Environment Ontology (ENVO)	Unclassified (45.038 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (61.069 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 52.13% β-sheet: 0.00% Coil/Unstructured: 47.87%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.50
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.50
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 131 Family Scaffolds
PF00196	GerE	5.34
PF01145	Band_7	3.05
PF07411	DUF1508	2.29
PF00072	Response_reg	1.53
PF13191	AAA_16	1.53
PF14333	DUF4389	1.53
PF07521	RMMBL	1.53
PF00990	GGDEF	1.53
PF00487	FA_desaturase	1.53
PF05653	Mg_trans_NIPA	1.53
PF04024	PspC	0.76
PF10057	MpsC	0.76
PF02397	Bac_transf	0.76
PF04261	Dyp_perox	0.76
PF08818	DUF1801	0.76
PF13333	rve_2	0.76
PF13581	HATPase_c_2	0.76
PF07731	Cu-oxidase_2	0.76
PF06897	DUF1269	0.76
PF07040	DUF1326	0.76

COG ID	Name	Functional Category	% Frequency in 131 Family Scaffolds
COG3422	Uncharacterized conserved protein YegP, UPF0339 family	Function unknown [S]	2.29
COG1398	Fatty-acid desaturase	Lipid transport and metabolism [I]	1.53
COG3239	Fatty acid desaturase	Lipid transport and metabolism [I]	1.53
COG2132	Multicopper oxidase with three cupredoxin domains (includes cell division protein FtsP and spore coat protein CotA)	Cell cycle control, cell division, chromosome partitioning [D]	0.76
COG2148	Sugar transferase involved in LPS biosynthesis (colanic, teichoic acid)	Cell wall/membrane/envelope biogenesis [M]	0.76
COG2837	Periplasmic deferrochelatase/peroxidase EfeB	Inorganic ion transport and metabolism [P]	0.76
COG4430	Uncharacterized conserved protein YdeI, YjbR/CyaY-like superfamily, DUF1801 family	Function unknown [S]	0.76
COG4803	Uncharacterized membrane protein	Function unknown [S]	0.76
COG5588	Uncharacterized conserved protein, DUF1326 domain	Function unknown [S]	0.76
COG5646	Iron-binding protein Fra/YdhG, frataxin family (Fe-S cluster biosynthesis)	Posttranslational modification, protein turnover, chaperones [O]	0.76
COG5649	Uncharacterized conserved protein, DUF1801 domain	Function unknown [S]	0.76

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.96 %
All Organisms	root	All Organisms	45.04 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.96 %
cellular organisms	root	All Organisms → cellular organisms	45.04 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.96 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	45.04 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.96 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	35.11 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.96 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	35.11 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.96 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	13.74 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5.34 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.96 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	7.63 %
Thermoleophilales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales	4.58 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	2.29 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	0.76 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.76 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.76 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.96 %
Thermoleophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae	4.58 %
Nocardioidaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	2.29 %
Conexibacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae	2.29 %
Solirubrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae	1.53 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.76 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.76 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.76 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.96 %
unclassified Thermoleophilaceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae	4.58 %
Conexibacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter	2.29 %
Nocardioides	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	2.29 %
Solirubrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	1.53 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.76 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.76 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.76 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.96 %
Thermoleophilaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	4.58 %
Conexibacter woesei	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	2.29 %
unclassified Nocardioides	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides	2.29 %
Solirubrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	1.53 %
unclassified Streptomyces	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces	0.76 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.76 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.76 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.96 %
Thermoleophilaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	4.58 %
Nocardioides sp. LS1	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides → Nocardioides sp. LS1	2.29 %
Conexibacter woesei	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	2.29 %
Solirubrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	1.53 %
Streptomyces sp. Mg1	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. Mg1	0.76 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.76 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.76 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.76 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001686\|C688J18823_10612480	Not Available	695	Open in IMG/M
3300001686\|C688J18823_10770334	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	611	Open in IMG/M
3300002568\|C688J35102_120011853	Not Available	845	Open in IMG/M
3300002568\|C688J35102_120024712	All Organisms → cellular organisms → Bacteria	850	Open in IMG/M
3300002568\|C688J35102_120951328	All Organisms → cellular organisms → Bacteria	2909	Open in IMG/M
3300002568\|C688J35102_120983100	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5369	Open in IMG/M
3300003267\|soilL1_10151238	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	1413	Open in IMG/M
3300004081\|Ga0063454_100016213	All Organisms → cellular organisms → Bacteria	2213	Open in IMG/M
3300004081\|Ga0063454_100726198	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	753	Open in IMG/M
3300004081\|Ga0063454_101645421	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	556	Open in IMG/M
3300004153\|Ga0063455_100089957	All Organisms → cellular organisms → Bacteria	1224	Open in IMG/M
3300004463\|Ga0063356_103715179	Not Available	657	Open in IMG/M
3300005093\|Ga0062594_101183979	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	756	Open in IMG/M
3300005327\|Ga0070658_11684157	Not Available	549	Open in IMG/M
3300005328\|Ga0070676_10073236	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2061	Open in IMG/M
3300005329\|Ga0070683_100065995	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3370	Open in IMG/M
3300005329\|Ga0070683_101095663	Not Available	765	Open in IMG/M
3300005329\|Ga0070683_101343533	Not Available	687	Open in IMG/M
3300005330\|Ga0070690_100965445	Not Available	670	Open in IMG/M
3300005331\|Ga0070670_101376209	Not Available	647	Open in IMG/M
3300005334\|Ga0068869_101437998	Not Available	611	Open in IMG/M
3300005334\|Ga0068869_101619723	Not Available	577	Open in IMG/M
3300005334\|Ga0068869_101781000	Not Available	551	Open in IMG/M
3300005337\|Ga0070682_100068295	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	2266	Open in IMG/M
3300005340\|Ga0070689_100053746	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	3117	Open in IMG/M
3300005341\|Ga0070691_10256081	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	940	Open in IMG/M
3300005341\|Ga0070691_10504325	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	700	Open in IMG/M
3300005343\|Ga0070687_100015577	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	3443	Open in IMG/M
3300005344\|Ga0070661_100652962	Not Available	854	Open in IMG/M
3300005345\|Ga0070692_10624291	Not Available	716	Open in IMG/M
3300005347\|Ga0070668_100095667	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2346	Open in IMG/M
3300005354\|Ga0070675_100513275	Not Available	1081	Open in IMG/M
3300005355\|Ga0070671_100741922	Not Available	853	Open in IMG/M
3300005437\|Ga0070710_10135761	All Organisms → cellular organisms → Bacteria	1504	Open in IMG/M
3300005438\|Ga0070701_10176660	Not Available	1247	Open in IMG/M
3300005441\|Ga0070700_100058625	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides → Nocardioides sp. LS1	2420	Open in IMG/M
3300005457\|Ga0070662_100294973	Not Available	1315	Open in IMG/M
3300005547\|Ga0070693_100180125	Not Available	1360	Open in IMG/M
3300005547\|Ga0070693_100418876	All Organisms → cellular organisms → Bacteria	933	Open in IMG/M
3300005564\|Ga0070664_100667049	Not Available	967	Open in IMG/M
3300005564\|Ga0070664_101742827	All Organisms → cellular organisms → Bacteria	591	Open in IMG/M
3300005614\|Ga0068856_100272977	All Organisms → cellular organisms → Bacteria	1707	Open in IMG/M
3300005616\|Ga0068852_100220178	All Organisms → cellular organisms → Bacteria	1805	Open in IMG/M
3300005618\|Ga0068864_101325489	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	720	Open in IMG/M
3300005719\|Ga0068861_100038416	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	3565	Open in IMG/M
3300005834\|Ga0068851_10170927	Not Available	1199	Open in IMG/M
3300005842\|Ga0068858_101803357	Not Available	604	Open in IMG/M
3300005843\|Ga0068860_102274207	Not Available	563	Open in IMG/M
3300006058\|Ga0075432_10472705	Not Available	554	Open in IMG/M
3300006755\|Ga0079222_10264432	All Organisms → cellular organisms → Bacteria	1093	Open in IMG/M
3300006755\|Ga0079222_10695209	Not Available	803	Open in IMG/M
3300006806\|Ga0079220_10625933	All Organisms → cellular organisms → Bacteria → Proteobacteria	771	Open in IMG/M
3300006854\|Ga0075425_100519462	Not Available	1371	Open in IMG/M
3300009011\|Ga0105251_10659902	Not Available	501	Open in IMG/M
3300009098\|Ga0105245_10413938	Not Available	1350	Open in IMG/M
3300009098\|Ga0105245_10675512	Not Available	1064	Open in IMG/M
3300009148\|Ga0105243_10333685	Not Available	1386	Open in IMG/M
3300009148\|Ga0105243_12363083	Not Available	570	Open in IMG/M
3300009148\|Ga0105243_12381638	Not Available	568	Open in IMG/M
3300009174\|Ga0105241_11083569	Not Available	753	Open in IMG/M
3300009177\|Ga0105248_11842861	Not Available	686	Open in IMG/M
3300009789\|Ga0126307_11409836	Not Available	565	Open in IMG/M
3300009840\|Ga0126313_10001232	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	13322	Open in IMG/M
3300009840\|Ga0126313_10066706	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	2578	Open in IMG/M
3300010039\|Ga0126309_10933615	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	577	Open in IMG/M
3300010041\|Ga0126312_10494092	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	875	Open in IMG/M
3300010373\|Ga0134128_10482279	Not Available	1383	Open in IMG/M
3300010400\|Ga0134122_10036424	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	3741	Open in IMG/M
3300010400\|Ga0134122_12238545	Not Available	591	Open in IMG/M
3300010400\|Ga0134122_12572092	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	559	Open in IMG/M
3300012212\|Ga0150985_110981221	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1258	Open in IMG/M
3300012469\|Ga0150984_120769938	Not Available	633	Open in IMG/M
3300012951\|Ga0164300_10025058	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	2119	Open in IMG/M
3300012957\|Ga0164303_10362860	Not Available	880	Open in IMG/M
3300012958\|Ga0164299_11330680	Not Available	551	Open in IMG/M
3300012984\|Ga0164309_10280141	Not Available	1192	Open in IMG/M
3300012985\|Ga0164308_10247142	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1388	Open in IMG/M
3300012985\|Ga0164308_10507537	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	1010	Open in IMG/M
3300012986\|Ga0164304_10532113	Not Available	864	Open in IMG/M
3300012989\|Ga0164305_10057272	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2315	Open in IMG/M
3300013297\|Ga0157378_10589763	Not Available	1121	Open in IMG/M
3300013306\|Ga0163162_10428936	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1454	Open in IMG/M
3300013768\|Ga0120155_1055808	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1163	Open in IMG/M
3300014325\|Ga0163163_10624707	Not Available	1141	Open in IMG/M
3300014325\|Ga0163163_12238113	Not Available	606	Open in IMG/M
3300014745\|Ga0157377_11541104	Not Available	530	Open in IMG/M
3300015371\|Ga0132258_11469039	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. Mg1	1722	Open in IMG/M
3300015373\|Ga0132257_102012618	Not Available	745	Open in IMG/M
3300020080\|Ga0206350_10713645	Not Available	606	Open in IMG/M
3300020081\|Ga0206354_10073751	Not Available	546	Open in IMG/M
3300020202\|Ga0196964_10138370	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1097	Open in IMG/M
3300024430\|Ga0196962_10032277	Not Available	1571	Open in IMG/M
3300025898\|Ga0207692_10848407	Not Available	599	Open in IMG/M
3300025899\|Ga0207642_10394418	Not Available	827	Open in IMG/M
3300025899\|Ga0207642_11048298	Not Available	526	Open in IMG/M
3300025903\|Ga0207680_11330516	Not Available	510	Open in IMG/M
3300025908\|Ga0207643_10247296	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	1098	Open in IMG/M
3300025918\|Ga0207662_10050484	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2471	Open in IMG/M
3300025932\|Ga0207690_10161388	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1671	Open in IMG/M
3300025932\|Ga0207690_10344921	Not Available	1176	Open in IMG/M
3300025937\|Ga0207669_10769598	Not Available	796	Open in IMG/M
3300025938\|Ga0207704_11003642	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	706	Open in IMG/M
3300025942\|Ga0207689_10073864	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2802	Open in IMG/M
3300025944\|Ga0207661_10165516	All Organisms → cellular organisms → Bacteria	1921	Open in IMG/M
3300025945\|Ga0207679_10646003	Not Available	957	Open in IMG/M
3300025945\|Ga0207679_11154023	Not Available	711	Open in IMG/M
3300025961\|Ga0207712_11465250	Not Available	611	Open in IMG/M
3300026041\|Ga0207639_10437544	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1185	Open in IMG/M
3300026075\|Ga0207708_10052794	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides → Nocardioides sp. LS1	3096	Open in IMG/M
3300026078\|Ga0207702_10170200	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides → Nocardioides sp. LS1	1997	Open in IMG/M
3300026078\|Ga0207702_10517942	All Organisms → cellular organisms → Bacteria	1164	Open in IMG/M
3300026088\|Ga0207641_10421125	Not Available	1286	Open in IMG/M
3300026118\|Ga0207675_102711231	Not Available	504	Open in IMG/M
3300027907\|Ga0207428_10426295	Not Available	969	Open in IMG/M
3300028379\|Ga0268266_10422264	Not Available	1264	Open in IMG/M
3300028587\|Ga0247828_10072923	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1554	Open in IMG/M
3300028589\|Ga0247818_10316517	Not Available	1040	Open in IMG/M
3300028589\|Ga0247818_10602028	Not Available	756	Open in IMG/M
3300028889\|Ga0247827_10253008	Not Available	1004	Open in IMG/M
3300031152\|Ga0307501_10109702	Not Available	708	Open in IMG/M
3300031938\|Ga0308175_100362836	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	1501	Open in IMG/M
3300031938\|Ga0308175_100821128	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1018	Open in IMG/M
3300031995\|Ga0307409_100794179	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	954	Open in IMG/M
3300031996\|Ga0308176_10554654	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1175	Open in IMG/M
3300031996\|Ga0308176_10568786	Not Available	1161	Open in IMG/M
3300031996\|Ga0308176_12614279	Not Available	538	Open in IMG/M
3300032002\|Ga0307416_100732921	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1080	Open in IMG/M
3300032002\|Ga0307416_101535298	Not Available	772	Open in IMG/M
3300032074\|Ga0308173_10758995	Not Available	890	Open in IMG/M
3300032159\|Ga0268251_10373192	Not Available	611	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	51.91%
Host-Associated	Host-Associated	48.09%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	51.91%
Plants	Host-Associated → Plants	48.09%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	51.91%
Rhizosphere	Host-Associated → Plants → Rhizosphere	26.72%
Rhizoplane	Host-Associated → Plants → Rhizoplane	19.08%
Roots	Host-Associated → Plants → Roots	1.53%
Phylloplane	Host-Associated → Plants → Phylloplane	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	28.24%
Loam	Environmental → Terrestrial → Soil → Loam	22.14%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	16.79%
Soil	Host-Associated → Plants → Rhizosphere → Soil	13.74%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	12.98%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.29%
Sand	Environmental → Terrestrial → Soil → Sand	1.53%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	1.53%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	16.79%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	16.03%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	14.50%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	13.74%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	12.98%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	7.63%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	7.63%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.82%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.29%
Desert	Environmental → Terrestrial → Soil → Sand → Desert	1.53%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	1.53%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.76%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified	0.76%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	7.63%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	7.63%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	7.63%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.87%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	6.87%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	6.11%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	4.58%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	4.58%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	4.58%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	3.82%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	3.82%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	3.82%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	3.05%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	3.05%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.29%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.29%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	2.29%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.29%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	2.29%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	1.53%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	1.53%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.53%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	1.53%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.53%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.76%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	0.76%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	0.76%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.76%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.76%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.76%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.76%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.76%
Agave	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified → Agave	0.76%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001686	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300003267	Sugarcane bulk soil Sample L1	Environmental	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005327	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG	Host-Associated	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005834	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2	Host-Associated	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300006058	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1	Host-Associated	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300009011	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010039	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013768	Permafrost microbial communities from Nunavut, Canada - A35_65cm_0M	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300020080	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-4 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020081	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020202	Soil microbial communities from Anza Borrego desert, Southern California, United States - S1_10	Environmental	Open in IMG/M
3300024430	Soil microbial communities from Anza Borrego desert, Southern California, United States - S3+v_20	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028587	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day3	Environmental	Open in IMG/M
3300028589	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day1	Environmental	Open in IMG/M
3300028889	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day2	Environmental	Open in IMG/M
3300031152	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 15_S	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300031995	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2	Host-Associated	Open in IMG/M
3300031996	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2	Environmental	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032074	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R1	Environmental	Open in IMG/M
3300032159	Agave microbial communities from Guanajuato, Mexico - As.Ma.e (v2)	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
C688J18823_106124801	3300001686	Soil	MPRPSQREIAAARKVVRQQELDLAIADGRLTVRTMTAEERAESHARVTAAKARGARRPGP
C688J18823_107703342	3300001686	Soil	MSHSRPSQRDLAAAKKIERQADMERAIAEGRLVVRTMTADERAQSDARWAAAAPARAGRRKRSQYR*
C688J35102_1200118532	3300002568	Soil	MAYQRPTQRELAAARKVVRQQEMDHAIAEGRLTVRTMTGQERAQSHARLAAAEARGAGRKAARNR*
C688J35102_1200247121	3300002568	Soil	MAYQRPTQSERAAARKVVRQQEMDRAIAEGRLTVRTMTADERAESHVRLAAAEARGAGRKAARNR*
C688J35102_1209513281	3300002568	Soil	MAHQRPTQRELAAAKKATRQQDMDRAIAEGRLVVRKMTAEERAQSDTRWTAAANARAERRQRRTYR*
C688J35102_1209831003	3300002568	Soil	MAYQRPTQREMAAARKLVRQQDMDRAIAEGRLTVRTMTVEERAESHARLAAAEARGAGRKAARRR*
soilL1_101512383	3300003267	Sugarcane Root And Bulk Soil	MADRPTQRDVAAAKKAERQQEMDRAIAEGRLTVRTMTPKERAESDARPKRARARGAPRQG
Ga0063454_1000162133	3300004081	Soil	MKVDARRGEGKDTMAYQRPTQREMAAARKLVRQQDMDRAIAEGRLTVRTMTVEERAESHARLAAAEARGAGRKAARRR*
Ga0063454_1007261981	3300004081	Soil	MAPPRPSQRDLVAAKKAARQADMDRAIAEGRLVVRQMTAEERKQSDARKVRAGRRQRRDFR*
Ga0063454_1016454212	3300004081	Soil	MAYQRPSQRELAAARKVVREQEMQRAVDEGRLTVRTMTAEERAQSDARATRGRGRPTSAGGAQ*
Ga0063455_1000899571	3300004153	Soil	DLAAAKKIERQADMERAIAEGRLVVRTMTADERAQSDARSAAAAPARAGRRKRSQSR*
Ga0063356_1037151791	3300004463	Arabidopsis Thaliana Rhizosphere	MATAYQRPTQRELAAARKAVRQQEMDAAIADGRLTVRRMTAEERAQSDARWAAAAPARLRRRKRPSYR*
Ga0062594_1011839792	3300005093	Soil	MPYQRPSQRELAAARKVVRQGEMDRAIAEGRLIVRPMTAQERVESDARYAAAAKARLRGRKAPRYR*
Ga0070658_116841571	3300005327	Corn Rhizosphere	MAYQRPSQRELAAARKVVRQDEMDRAIAEGRLTVRTMTAQERVESDARYAAAAKARLRGRKAPRYR*
Ga0070676_100732363	3300005328	Miscanthus Rhizosphere	MPYQRPSQRELAAARKVVRQGEMDRAIAEGRLTVRTMTAQERTESDARWAAAAKARARGRKTARYR*
Ga0070683_1000659956	3300005329	Corn Rhizosphere	VAYRRLSQRELADAKKVVRRQEMDRAIAEGRLTVRTMTAEERAQSDARRAAAAGARAARKTSRSR*
Ga0070683_1010956632	3300005329	Corn Rhizosphere	MAYQRPSQRELAAARKVVRQGEMDRAIAEGRLTVRTMTAQERTESDARWAAAAKARARGRKTARYR*
Ga0070683_1013435332	3300005329	Corn Rhizosphere	MTPGPAFQRPSQRELAAARKVVRQQDMDRAIAEGTLTVRAMTAEERAQSNARFAAAAKTRAAGSNIRRYR*
Ga0070690_1009654452	3300005330	Switchgrass Rhizosphere	MPYQRPSQRELAAARKVVRQGEMDRAIAEGRLIVRPMTAQERVESDARYAAAADARLRGRKGARYR*
Ga0070670_1013762092	3300005331	Switchgrass Rhizosphere	MAYQRPSQRELAAARKVVRQDEMDRAIAEGRLTVRTMTAQERVESDARWAAATKARARGRKTPRYR*
Ga0068869_1014379981	3300005334	Miscanthus Rhizosphere	MRREGRDTMAYQRPSQRELAAARKVVRQDEMDRAIAEGRLTVRTMTAQERVESDARWAAATKARARGRKTSRYR*
Ga0068869_1016197231	3300005334	Miscanthus Rhizosphere	MAYQRPSQRELAAAKKVVRQGEMDRAIAEGRLTVRTMTAQERAESDARWAAAAKARARGRKTARYR*
Ga0068869_1017810001	3300005334	Miscanthus Rhizosphere	AYQRPTQRELAAARKVERQADMDRAIAEGRLTVRRMTPDERVQADARWDAAATARMRRRLRPYPR*
Ga0070682_1000682954	3300005337	Corn Rhizosphere	MAYQRPSQRELAAARKVVRQGEMDRAIAEGRLTVRTMTAQERAESDARWAAAANARARGRKTARYR*
Ga0070689_1000537464	3300005340	Switchgrass Rhizosphere	MTYQRPSQRELAAARKVVRQDEMDRAIAEGRLAVRAMTTQERAESDARWAAASKARARGRKTPRYR*
Ga0070691_102560813	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	LAAARKVVRQQDMDRAIAEGTLTVRAMTAEERAQSNARFAAAAKTRAAGSNIRRYR*
Ga0070691_105043251	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	AARKVVRQGEMDRAIAEGRLIVRPMTAQERVESDARYAAAAKARLRGRKAPRYR*
Ga0070687_1000155777	3300005343	Switchgrass Rhizosphere	MPYQRPSQRELAAARKVVRQGEMDRAIAEGRLIVRPMTAQERVESDARYAAAAKARLPGSKAPRYR*
Ga0070661_1006529622	3300005344	Corn Rhizosphere	AARKVVRQGEMDRAIAEGRLTVRTMTAQERTESDARWAAAAKARARGRKTARYR*
Ga0070692_106242912	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	MTPGPAFQRPSQRELAAARKVERQQDMDRAIAEGTLTVRAMTAEERAQSNARFAAAAKTRAAGSNIRRYR*
Ga0070668_1000956674	3300005347	Switchgrass Rhizosphere	AARKVVRQGEMDRAIAEGRLTVRTMTAQERAESDARWAAAAKARARGRKTARYR*
Ga0070675_1005132752	3300005354	Miscanthus Rhizosphere	MAYQRPSQRELAAARKVVRQGEMDRAIAEGRLTVRTMTAQERAESDARWAAAAKARARGRKTARYR*
Ga0070671_1007419222	3300005355	Switchgrass Rhizosphere	TMAYQRPSQRELAAARKVVRQGEMDRAIAEGRLTVRTMTAQERTESDARWAAAAKARARGRKTARYR*
Ga0070710_101357612	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MAYQRPSQRELAAARKLVRQDEMDRAIAEGRLTVRAMTAQERAESDARWAAASKARARGRKTSSYR*
Ga0070701_101766602	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	MAYQRPSQRELAAARKVVRQDEMDRAIAEGRLTVRPMTAQERVESDARYAAAADARLRGRKGARYR*
Ga0070700_1000586252	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	MIPGPAFQRPSQRDLAAARKVVRQQDMDRAIAEGTLTVRAMTAEERAQSNARFAAAAKTRAAGSNIRRYR*
Ga0070662_1002949732	3300005457	Corn Rhizosphere	MAYQRPSQRELAAARKVVRQGEMDRAIAEGRLTVRTMTAQERAESDARWAAAANARARGRKT
Ga0070693_1001801251	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	MAYQRPSQRELAAARKVVRQGEMDRAIAEGRLTVRTMTAQERTESDARWAAAANARARGRKTARYR*
Ga0070693_1004188762	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	MAYQRPTQRELAAARKVERQDEMDRAIAEGRLTVRKMTADERVQADARWDAAATARTRRPARPRRG*
Ga0070664_1006670493	3300005564	Corn Rhizosphere	LAAARKVVRQGEMDRAIAEGRLTVRTMTAQERTESDARWAAAAKARARGRKTARYR*
Ga0070664_1017428272	3300005564	Corn Rhizosphere	VAYRRLSQRELADAKKVVRRQEMDRAIAEGRLTVRTMTAEERAQSDARWAAAAGARAARKTSRSR*
Ga0068856_1002729772	3300005614	Corn Rhizosphere	MAYQRPTQRELAAARKVERQADMDRAIAEGRLTVRRMTPDERVQADARWDAAATARMRRRPRPYPR*
Ga0068852_1002201783	3300005616	Corn Rhizosphere	MPYQRPSQRELAAARKVVRQGEMDRAIAEGRLIVRPMTAQERVESDARYAAAAKARLRGRKGPRYR*
Ga0068864_1013254892	3300005618	Switchgrass Rhizosphere	MPYQRPSQRELAAARKVVRQDEMDRAIAEGRLTVRPMTAQERVESDARYAAAADARLRGRKGARYR*
Ga0068861_1000384165	3300005719	Switchgrass Rhizosphere	MAYQRPSQRDLAAARKVVRQDEMDRAIAEGRLTVRTMTAEERSQSDARWTAASAARAKGRKGPRYR*
Ga0068851_101709271	3300005834	Corn Rhizosphere	RREPPMTPGPAFQRPSQRELAAARKVVRQQDMDRAIAEGTLTVRAMTAEERAQSNARFAAAAKTRAAGSNIRRYR*
Ga0068858_1018033571	3300005842	Switchgrass Rhizosphere	SALCAEKEGNTMAYQRPSQRELAAARKVVRQGEMDRAIAEGRLTVRTMTAQERTESDARWAAAAKARARGRKTARYR*
Ga0068860_1022742071	3300005843	Switchgrass Rhizosphere	MAYQRPSQRELAAARKVVRQDEMDRAIAEGRLTVRTMTAEERSQSDARWTAASAA
Ga0075432_104727051	3300006058	Populus Rhizosphere	MPYQRPSQRELAAARKVVRQDEMDRAIAEGRLTVRPMTAQERVESDARYAAAAKARLRGRKAPRYR
Ga0079222_102644322	3300006755	Agricultural Soil	VAYRRPSQRELADAKNVIRRQEMNRAIAEGRLTVRTRTPEERAQSDARWAAAAGARAARKTSRSR*
Ga0079222_106952092	3300006755	Agricultural Soil	APGPRGATLRRRELPLTPGAAYRRPSQRELAAARKVVRQQDMDRAIAEGRLKVRAMTAEERAQSNARFAAAAKARAAGSKSRRYR*
Ga0079220_106259331	3300006806	Agricultural Soil	LSAERAYQRPSQRELAAARKAVRRQEMDRAIAEGRLTVRGMTAEERAQSDARFAAAAKARAAGPGSRRSR*
Ga0075425_1005194621	3300006854	Populus Rhizosphere	MAYQRPSQRELAAARKVVRQGEMDRAIAEGRLIVRPMTAQERVESDARYAAAAKARLRGRKAPRYR*
Ga0105251_106599021	3300009011	Switchgrass Rhizosphere	YRRLSQRELADAKKVVRRQEMDRAIAEGRLTVRTMTAQERAESDARWAAAANARARGRKTARYR*
Ga0105245_104139382	3300009098	Miscanthus Rhizosphere	MAYQRPSQRELAAARKVVRQDEMDRAIAEGRLTVRTMTAQERVESDARWAAATKARARGRKTSRYR*
Ga0105245_106755121	3300009098	Miscanthus Rhizosphere	MAYQRPSQRELAAAKKVVRQGEMDRAIAEGRLTVRTMTAQERAESDARWAAAANARARGRKTARYR*
Ga0105243_103336851	3300009148	Miscanthus Rhizosphere	MAYQRPTQRELAAARKVVRLEEMDRAISEGRLTVRTMTTEERARSDARSTPAAKARTRRGHRLHG*
Ga0105243_123630831	3300009148	Miscanthus Rhizosphere	AYQRPSQRELAAARKVVRQGEMDRAIAEGRLTVRTMTAQERTESDARWAAAAKARARGRKTARYR*
Ga0105243_123816381	3300009148	Miscanthus Rhizosphere	AYQRPSQRELAAARKVVRQGEMDRAIAEGRLTVRTMTAQERAESDARWAAAANARARGRKTARYR*
Ga0105241_110835691	3300009174	Corn Rhizosphere	MAYQRPSQRELAAARKVVRQGEMDRAIAEGRLTVRTMTAQERAESDARSAAAAKARARGRKTARYR*
Ga0105248_118428612	3300009177	Switchgrass Rhizosphere	MAYQRPTQRELAAARKVVRLEEMDCAISEGRLTVRTMTTEERARSDARSTPAAKARTRRGHRLHG*
Ga0126307_114098361	3300009789	Serpentine Soil	MAYQRPTQRELEAARKVVRQQELDRAIAEGRLTVRTMTAEERAQSEARWAAAATARAG
Ga0126313_100012325	3300009840	Serpentine Soil	MAYQRPTQRELEAARKVVRQQELDRAIAEGRLTVRTMTAEERAQSEARWAAAATARAGRRKGSQYR*
Ga0126313_100667062	3300009840	Serpentine Soil	MAHQRPTQRELAAAKKATRQQDMDRAIAEGRLVVRKMTAEERAQSDTRWTAAANARAGRRQRRTYR*
Ga0126309_105691901	3300010039	Serpentine Soil	MAYQRPTQRDLAAARKTARQADMDRAISDGRLVVRTMTAEEREQSDARWAAAQARSSARKRLPQR*
Ga0126309_109336152	3300010039	Serpentine Soil	WPTRPTQRELAAARKVARQQELERAIAEGRLTVRTMTAEERAQSDARRAAAATARAGRRKGSQYG*
Ga0126312_104940922	3300010041	Serpentine Soil	MAHQRPTQRELAAAKKATRQQDMDRAIAEGRLVVRKMTAEERAQSDARWAAAAPARAGRRKGSQYR*
Ga0134128_104822791	3300010373	Terrestrial Soil	MAYQRPSQRELAAARKVVRQGEMDRAIAEGRLTVRTMTAQERTESDARWAAAAKA
Ga0134122_100364243	3300010400	Terrestrial Soil	MAYQRPSQRELAAAKKVVRQGEMDRAIAEGRLTVRTMTAQERTESDARWAAAAKARARGRKTARYR*
Ga0134122_122385452	3300010400	Terrestrial Soil	MPQPSQRELAAARKVVRQQELDLAIADGRLTVRTMTAEERAESSARVTAAEARGARRRGPRYR*
Ga0134122_125720921	3300010400	Terrestrial Soil	HLAPRAQKEGSTMPYQRPSQRELAAARKVVRQGEMDRAIAEGRLTVRPMTAQERVESDARYAAAAKARLRGRKAPRYR*
Ga0150985_1109812214	3300012212	Avena Fatua Rhizosphere	RALWALLLSLPERHLRPRGQIRTTMAYQRPSQREVAAAKKAVRQEEMDRAIAEGRLTVRTMTAEERAQSDARRTAGATARAKGRKTSRYR*
Ga0150984_1207699382	3300012469	Avena Fatua Rhizosphere	MAYQRPTQRELAAARKVERQGEMDRAIADGRLTVRKMTADERVEADARWDAAATARMRQIGRA
Ga0164300_100250584	3300012951	Soil	MAYQRPTQRELAAARKVVRLEEMDRAISEGRLTVRTMTTEERARSDARATPAAKARTRRGNRLHG*
Ga0164303_103628601	3300012957	Soil	MAYQRPSQRELAAARKVVRQDEMDRAIAEGRLTVRAMTAQERAESDARWAAASKARARGRKTPRYR*
Ga0164299_113306802	3300012958	Soil	MAYQRPSQRELAAARKVVRQDEMDRAIAEGRLTVRAMTAQERAESDARWAAASKARA
Ga0164309_102801411	3300012984	Soil	MAYQRPTQRELAAARKVVRLEEMDRAISEGRLTVRTMTTEERARSDARSTPAAKARTRRGNSLHG*
Ga0164308_102471423	3300012985	Soil	FRPCAEKEGTPMAYQRPSQRELAAARKVVRQDEMDRAIAEGRLTVRAMTAQERAESDARWAAASKARARGRKTPRYR*
Ga0164308_105075372	3300012985	Soil	MASPRPTQRELAAVRQAARRVEMDCAIAEGRLTVRKMTVVEREQSTARVAAAEKRGARKRRRFG*
Ga0164304_105321131	3300012986	Soil	MAYQRPTQRELAAARKVVRLEEMDRAISEGRLTVRTMTTEERARSDARSTPVAKARTRRGNSLHG*
Ga0164305_100572724	3300012989	Soil	MAYQRPTQRELAAARKVVRLEEMDRAISEGRLTVRTMTTEERARSDARATPAAKARTRRGHRLHG*
Ga0157378_105897632	3300013297	Miscanthus Rhizosphere	SQRELAAARKVVRQDEMDRAIAEGRLTVRPMTAQERVESDARYAAAADARLRGRKGARYR
Ga0163162_104289363	3300013306	Switchgrass Rhizosphere	PSQRELAAARKVVRQGEMDRAIAEGRLTVRTMTAQERAESDARWAAAANARARGRKTARYR*
Ga0120155_10558083	3300013768	Permafrost	MANPRPSQKELAAAKKVVRQQEMESAIADGRLVVRKMTAEERDESEARYVAAKARAATRKRRGSR*
Ga0163163_106247071	3300014325	Switchgrass Rhizosphere	QRPSQRELAAARKVVRQGEMDRAIAEGRLIVRPMTAQERVESDARYAAAAKARLRGRKAPRYR*
Ga0163163_122381131	3300014325	Switchgrass Rhizosphere	MAYQRPTQRELAAARKVERQADMDRAIAEGRLTVRRMTPDERVQADARWDAAATARMRRRLRPYPR*
Ga0157377_115411041	3300014745	Miscanthus Rhizosphere	QRELAAARKVVRQDEMDRAIAEGRLTVRTMTAQERVESDARWAAATKARARGRKTSRYR*
Ga0132258_114690393	3300015371	Arabidopsis Rhizosphere	LTAGTYRRPSQRDLAAARKAERQKDMDRAIAEGRLTVRSMTAEERAQSDARVAAAARSRIGRSKPRRPR*
Ga0132257_1020126181	3300015373	Arabidopsis Rhizosphere	MAYRRPTQSELAAARKVLRLEEMERAIAEGRLTVRTMTAEERAQSDARRTAAASARTGNRTASRSR*
Ga0206350_107136451	3300020080	Corn, Switchgrass And Miscanthus Rhizosphere	MAYQRPSQRELAAARKVVRQGEMDRAIAEGRLTVRTMTAQERTESDARWAAAAKARARGRKTARYR
Ga0206354_100737511	3300020081	Corn, Switchgrass And Miscanthus Rhizosphere	MAYQRPSQRELAAARKVVRQGEMDRAIAEGRLTVRTMTAQERAESDARWAAAAKARARGRKTARYR
Ga0196964_101383702	3300020202	Soil	MAYQRPTQREVAAARKVVRQQELDRAIAEGRLTVRTMTAEEREQSATRRAAGQAPAGRRKGSQYR
Ga0196962_100322771	3300024430	Soil	MAYQRPTQRQLAAARKVVRQQELDRAIAEGRLTVRTMTAEERAQSDARWAAAATARAGRRKGSQYR
Ga0207692_108484071	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MAYQRPSQRELAAARKLVRQDEMDRAIAEGRLTVRAMTAQERAESDARWAAASKARARGRKTSSYR
Ga0207642_103944181	3300025899	Miscanthus Rhizosphere	MPYQRPSQRELAAARKVVRQGEMDRAIAEGRLIVRPMTAQERVESDARYAAAAKARLRGRKAPRYR
Ga0207642_110482981	3300025899	Miscanthus Rhizosphere	MAYQRPSQRELAAARKVVRQGEMDRAIAEGRLTVRTMTAQERAESDARWAAAANARARGRKTARYR
Ga0207680_113305162	3300025903	Switchgrass Rhizosphere	MPYQRPSQRELAAARKVVRQGEMDRAIAEGRLIVRPMTAQERVESDARYAAAAK
Ga0207643_102472962	3300025908	Miscanthus Rhizosphere	MPYQRPSQRELAAARKVVRQDEMDRAIAEGRLTVRPMTAQERVESDARYAAAADARLRGRKGARYR
Ga0207662_100504844	3300025918	Switchgrass Rhizosphere	MPYQRPSQRELAAARKVVRQGEMDRAIAEGRLIVRPMTAQERVESDARYAAAAKARLPGSKAPRYR
Ga0207690_101613883	3300025932	Corn Rhizosphere	ELAAAKKVVRQGEMDRAIAEGRLTVRTMTAQERAESDARWAAAAKARARGRKTARYR
Ga0207690_103449212	3300025932	Corn Rhizosphere	MAYQRPSQRELAAARKVVRQGEMDRAIAEGRLTVRTMTAQERAESDARWAAAANARARG
Ga0207669_107695981	3300025937	Miscanthus Rhizosphere	MPYQRPSQRELAAARKVVRQGEMDRAIAEGRLIVRPMTAQERVESDARYAAAADARLRGRKGARYR
Ga0207704_110036421	3300025938	Miscanthus Rhizosphere	DAHLAPRAQKEGSTMPYQRPSQRELAAARKVVRQGEMDRAIAEGRLIVRPMTAQERVESDARYAAAAKARLRGRKAPRYR
Ga0207689_100738643	3300025942	Miscanthus Rhizosphere	MAYQRPSQRELAAAKKVVRQGEMDRAIAEGRLTVRTMTAQERAESDARWAAAAKARARGRKTARYR
Ga0207661_101655161	3300025944	Corn Rhizosphere	VAYRRLSQRELADAKKVVRRQEMDRAIAEGRLTVRTMTAEERAQSDARRAAAAGARAARKTSRSR
Ga0207679_106460032	3300025945	Corn Rhizosphere	LAAARKVVRQGEMDRAIAEGRLTVRTMTAQERTESDARWAAAAKARARGRKTARYR
Ga0207679_111540231	3300025945	Corn Rhizosphere	VAYRRLSQRELADAKKVVRRQEMDRAIAEGRLTVRTMTAEERAQSDARRAAAAGARAARK
Ga0207712_114652501	3300025961	Switchgrass Rhizosphere	MAYQRPTQRELAAARKVVRQEDMDRAIADGRLTVRRMTAEEQAQSHARFAAAKARNASRRPRYR
Ga0207639_104375441	3300026041	Corn Rhizosphere	PFCAEKEGNIMAYQRPSQRELAAARKVVRQGEMDRAIAEGRLTVRTMTAQERAESDARWAAAANARARGRKTARYR
Ga0207708_100527943	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	MIPGPAFQRPSQRDLAAARKVVRQQDMDRAIAEGTLTVRAMTAEERAQSNARFAAAAKTRAAGSNIRRYR
Ga0207702_101702001	3300026078	Corn Rhizosphere	VAYRRLSQRELADAKKVVRRQEMDRAIAEGRLTVRTMTAQERTESDARWAAAAKARARGRKTARYR
Ga0207702_105179421	3300026078	Corn Rhizosphere	MAYQRPTQRELAAARKVERHADMDRAIAEGRLTVRRMTPDERVQADARWDAAATARMRRRLRPYPR
Ga0207641_104211251	3300026088	Switchgrass Rhizosphere	RPSQRELAAARKVVRQGEMDRAIAEGRLIVRPMTAQERVESDARYAAAAKARLRGRKAPRYR
Ga0207675_1027112312	3300026118	Switchgrass Rhizosphere	MIPGPAFQRPSQRDLAAARKVVRQQDMDRAIAEGTLTVRAMTAEERAQSNARFAAAAKTRAAGSNI
Ga0207428_104262952	3300027907	Populus Rhizosphere	MAYQRPSQRELAAARKVVRQGEMDRAIAEGRLTVRTMTAQERAESDARWAAVAKARARGRKTARYR
Ga0268266_104222642	3300028379	Switchgrass Rhizosphere	GGDVAPRAQKEGSTMPYQRPSQRELAAARKVVRQGEMDRAIAEGRLIVRPMTAQERVESDARYAAAADARLRGRKGARYR
Ga0247828_100729233	3300028587	Soil	MGYQRPSQRELAAARKVVRQDEMDRAIAEGRLTVRTMTVKERAESDARWAAASKARARGRKTARYYR
Ga0247818_103165172	3300028589	Soil	MAYQRPSQRELAAARKVVRQDEMDRAIAEGRLTVRTMTVKERAESDARWAAASKARARGRKTARYYR
Ga0247818_106020282	3300028589	Soil	VTAGTYRRPTQRDLAAARKAERQKDMDRAIAEGRLTVRSMTAEERAQSDARVAAAARSRIGRSKPRRLR
Ga0247827_102530081	3300028889	Soil	AAARKVVRQGEMDRAIAEGRLTVRTMTAQERTESDARWAAAAKARARGRKTARYR
Ga0307501_101097022	3300031152	Soil	RKPVPLTRPENERITMAYQRPSQRDLAAARKVVRQEEMDLAIAEGRLTVRTMTAEERSQSDARWTAATAARAKGRKTSRYR
Ga0308175_1003628362	3300031938	Soil	MAHQRPTQRELAAAKKATRQQDMDRAIAEGRLVVRKMTVEERAQSDIRWTAAANARAERRQRRTYR
Ga0308175_1008211283	3300031938	Soil	RERAAARKVVRLQEMDRAIAEGRLTVRAMTAEERADSHARLAAAEARRAGRKAARNR
Ga0307409_1007941791	3300031995	Rhizosphere	MAYQRPTQRERAAARKLVRQQELDRAIAEGRLTVRTMTAEERAQSDARWAAAARARAGRRKGSQYR
Ga0308176_105546542	3300031996	Soil	MAYQRPTQRERAAARKVVRLQEMDRAIAEGRLTVRAMTAEERADSHARLAAAEARRAGRKAARNR
Ga0308176_105687861	3300031996	Soil	MAHQRPTQRELAAAKKATRQQDMDRAIAEGRLVVRMMTVEERAQSDIRWTAAANARAERRQRRTYR
Ga0308176_126142791	3300031996	Soil	MAYQRPTQREVAAARKVVRQQEMDRAIADGRLTVRTMTTEERAQSDARWAAAAAARAGRRKRSAYR
Ga0307416_1007329213	3300032002	Rhizosphere	DTMAYQRPTQRELEAARKVVRQQELDRAIAEGRLTVRTMTAEERAQSEARWAAAATARAGRRKGSQYR
Ga0307416_1015352981	3300032002	Rhizosphere	RRPTQRELAAARKVVRLEEMDRAIAEGRLIVRTMTAEERAQSDAHRTAAAKARAGNRRASRSR
Ga0308173_107589952	3300032074	Soil	MELAAARKAVRRQEMDRAIAEGRLTVRGMTAEERAQSDARFAAAAKARAAGPGSGRSR
Ga0268251_103731922	3300032159	Agave	MPYQRPSQRELAAARKVVRQHEMDRAIAEGRLTVRPMTAEERAQSDARFAAAAKARAAGRKASRYR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F061759

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences