Metagenome / Metatranscriptome Family F061727

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F061727
Family Type	Metagenome / Metatranscriptome
Number of Sequences	131
Average Sequence Length	117 residues
Representative Sequence	MRTTQLLTAAALLALGACAPAISVRTALSPDASLTGLHTFRVLPTPQPKIASAVSSTNDPMLVNSISNRALRADLAQEFAGLGYVASDSNPDFCVAYYASTNQKLDVTYWDYGYA
Number of Associated Samples	87
Number of Associated Scaffolds	131

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	93.85 %
% of genes near scaffold ends (potentially truncated)	95.42 %
% of genes from short scaffolds (< 2000 bps)	88.55 %
Associated GOLD sequencing projects	76
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.31

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (98.473 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (39.695 % of family members)
Environment Ontology (ENVO)	Unclassified (53.435 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (58.779 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 33.57% β-sheet: 5.59% Coil/Unstructured: 60.84%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.31
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.31
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 131 Family Scaffolds
PF02954	HTH_8	14.50
PF07731	Cu-oxidase_2	6.11
PF14833	NAD_binding_11	6.11
PF13590	DUF4136	6.11
PF07690	MFS_1	3.82
PF00158	Sigma54_activat	3.05
PF13493	DUF4118	2.29
PF03707	MHYT	2.29
PF07732	Cu-oxidase_3	1.53
PF00072	Response_reg	0.76
PF00248	Aldo_ket_red	0.76
PF00196	GerE	0.76
PF06912	DUF1275	0.76
PF02148	zf-UBP	0.76
PF00115	COX1	0.76
PF13185	GAF_2	0.76

COG ID	Name	Functional Category	% Frequency in 131 Family Scaffolds
COG2132	Multicopper oxidase with three cupredoxin domains (includes cell division protein FtsP and spore coat protein CotA)	Cell cycle control, cell division, chromosome partitioning [D]	7.63
COG3300	MHYT domain, NO-binding membrane sensor	Signal transduction mechanisms [T]	2.29
COG5001	Cyclic di-GMP metabolism protein, combines GGDEF and EAL domains with a 6TM membrane domain	Signal transduction mechanisms [T]	2.29
COG3619	Uncharacterized membrane protein YoaK, UPF0700 family	Function unknown [S]	0.76
COG5207	Uncharacterized Zn-finger protein, UBP-type	General function prediction only [R]	0.76

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	98.47 %
Unclassified	root	N/A	1.53 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	98.47 %
Unclassified	root	N/A	1.53 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	98.47 %
Unclassified	root	N/A	1.53 %

Name	Rank	Taxonomy	Distribution
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	56.49 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	6.11 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2.29 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.53 %
Unclassified	root	N/A	1.53 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	56.49 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	1.53 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1.53 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.53 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.53 %
Unclassified	root	N/A	1.53 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	0.76 %

Name	Rank	Taxonomy	Distribution
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	56.49 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.53 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1.53 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.53 %
Unclassified	root	N/A	1.53 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.76 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	56.49 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.53 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.53 %
Unclassified	root	N/A	1.53 %
Nostocales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales	0.76 %
Geodermatophilales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales	0.76 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	0.76 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.76 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	56.49 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.53 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.53 %
Unclassified	root	N/A	1.53 %
Geodermatophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	0.76 %
Nocardioidaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	0.76 %
Nostocales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales	0.76 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.76 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	56.49 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.53 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.53 %
Unclassified	root	N/A	1.53 %
unclassified Geodermatophilaceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → unclassified Geodermatophilaceae	0.76 %
Pimelobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Pimelobacter	0.76 %
Nostocales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales	0.76 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.76 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	56.49 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.53 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.53 %
Unclassified	root	N/A	1.53 %
Geodermatophilaceae bacterium URHB0062	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → unclassified Geodermatophilaceae → Geodermatophilaceae bacterium URHB0062	0.76 %
Pimelobacter simplex	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Pimelobacter → Pimelobacter simplex	0.76 %
Nostocales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales	0.76 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.76 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001661\|JGI12053J15887_10434892	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	629	Open in IMG/M
3300002558\|JGI25385J37094_10097486	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	878	Open in IMG/M
3300002558\|JGI25385J37094_10212410	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	517	Open in IMG/M
3300002562\|JGI25382J37095_10045460	All Organisms → cellular organisms → Bacteria	1701	Open in IMG/M
3300002562\|JGI25382J37095_10122567	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	885	Open in IMG/M
3300002908\|JGI25382J43887_10382113	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	595	Open in IMG/M
3300005172\|Ga0066683_10112222	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1659	Open in IMG/M
3300005172\|Ga0066683_10416333	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	828	Open in IMG/M
3300005174\|Ga0066680_10130809	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1559	Open in IMG/M
3300005174\|Ga0066680_10573186	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	708	Open in IMG/M
3300005540\|Ga0066697_10461848	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	728	Open in IMG/M
3300005552\|Ga0066701_10028763	All Organisms → cellular organisms → Bacteria	2864	Open in IMG/M
3300005552\|Ga0066701_10313583	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	972	Open in IMG/M
3300005553\|Ga0066695_10465437	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	779	Open in IMG/M
3300005555\|Ga0066692_10203865	All Organisms → cellular organisms → Bacteria → Proteobacteria	1238	Open in IMG/M
3300005555\|Ga0066692_10590872	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	698	Open in IMG/M
3300005555\|Ga0066692_10673585	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	643	Open in IMG/M
3300005556\|Ga0066707_10131794	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1568	Open in IMG/M
3300005557\|Ga0066704_10151471	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1555	Open in IMG/M
3300005559\|Ga0066700_10668978	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	716	Open in IMG/M
3300005576\|Ga0066708_10236401	All Organisms → cellular organisms → Bacteria	1157	Open in IMG/M
3300005586\|Ga0066691_10406634	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	809	Open in IMG/M
3300005598\|Ga0066706_10349015	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1173	Open in IMG/M
3300006791\|Ga0066653_10603415	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Pimelobacter → Pimelobacter simplex	558	Open in IMG/M
3300006794\|Ga0066658_10737477	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	548	Open in IMG/M
3300006796\|Ga0066665_10998208	All Organisms → cellular organisms → Bacteria	642	Open in IMG/M
3300006797\|Ga0066659_10187387	All Organisms → cellular organisms → Bacteria	1504	Open in IMG/M
3300006797\|Ga0066659_10873780	All Organisms → cellular organisms → Bacteria	750	Open in IMG/M
3300006797\|Ga0066659_11824134	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → unclassified Geodermatophilaceae → Geodermatophilaceae bacterium URHB0062	515	Open in IMG/M
3300007258\|Ga0099793_10232478	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	888	Open in IMG/M
3300007258\|Ga0099793_10673750	All Organisms → cellular organisms → Bacteria	521	Open in IMG/M
3300009012\|Ga0066710_101340630	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1110	Open in IMG/M
3300009012\|Ga0066710_104787390	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	506	Open in IMG/M
3300009088\|Ga0099830_11314368	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	601	Open in IMG/M
3300009088\|Ga0099830_11512114	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	559	Open in IMG/M
3300009090\|Ga0099827_10095884	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2349	Open in IMG/M
3300009090\|Ga0099827_10501466	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1043	Open in IMG/M
3300009090\|Ga0099827_10607274	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	943	Open in IMG/M
3300009090\|Ga0099827_10611691	All Organisms → cellular organisms → Bacteria	940	Open in IMG/M
3300009090\|Ga0099827_11055142	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	705	Open in IMG/M
3300009090\|Ga0099827_11754717	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	541	Open in IMG/M
3300009137\|Ga0066709_101332221	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1050	Open in IMG/M
3300009137\|Ga0066709_103120098	All Organisms → cellular organisms → Bacteria	606	Open in IMG/M
3300009143\|Ga0099792_10274448	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	991	Open in IMG/M
3300010301\|Ga0134070_10352834	All Organisms → cellular organisms → Bacteria	571	Open in IMG/M
3300010321\|Ga0134067_10117700	All Organisms → cellular organisms → Bacteria	923	Open in IMG/M
3300010321\|Ga0134067_10381975	All Organisms → cellular organisms → Bacteria	561	Open in IMG/M
3300010329\|Ga0134111_10066615	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1336	Open in IMG/M
3300010336\|Ga0134071_10229855	All Organisms → cellular organisms → Bacteria	920	Open in IMG/M
3300010337\|Ga0134062_10778491	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	510	Open in IMG/M
3300010371\|Ga0134125_10112751	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3027	Open in IMG/M
3300010400\|Ga0134122_10002633	All Organisms → cellular organisms → Bacteria → Proteobacteria	13228	Open in IMG/M
3300010400\|Ga0134122_10894317	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	858	Open in IMG/M
3300011269\|Ga0137392_10321697	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1280	Open in IMG/M
3300011270\|Ga0137391_10026043	All Organisms → cellular organisms → Bacteria	4870	Open in IMG/M
3300012096\|Ga0137389_11086678	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	685	Open in IMG/M
3300012200\|Ga0137382_10183060	All Organisms → cellular organisms → Bacteria	1434	Open in IMG/M
3300012203\|Ga0137399_10919518	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	737	Open in IMG/M
3300012205\|Ga0137362_10704232	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	868	Open in IMG/M
3300012205\|Ga0137362_11107126	All Organisms → cellular organisms → Bacteria	673	Open in IMG/M
3300012207\|Ga0137381_11591533	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	544	Open in IMG/M
3300012209\|Ga0137379_10356266	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1372	Open in IMG/M
3300012211\|Ga0137377_11575828	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	581	Open in IMG/M
3300012361\|Ga0137360_11684365	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	540	Open in IMG/M
3300012362\|Ga0137361_10535688	All Organisms → cellular organisms → Bacteria	1075	Open in IMG/M
3300012363\|Ga0137390_10606371	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1062	Open in IMG/M
3300012410\|Ga0134060_1494871	All Organisms → cellular organisms → Bacteria	594	Open in IMG/M
3300012683\|Ga0137398_10760613	All Organisms → cellular organisms → Bacteria	675	Open in IMG/M
3300012683\|Ga0137398_11231477	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	510	Open in IMG/M
3300012918\|Ga0137396_10120113	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1894	Open in IMG/M
3300012918\|Ga0137396_10461849	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	941	Open in IMG/M
3300012918\|Ga0137396_10517432	All Organisms → cellular organisms → Bacteria	884	Open in IMG/M
3300012918\|Ga0137396_10570981	All Organisms → cellular organisms → Bacteria	837	Open in IMG/M
3300012918\|Ga0137396_10844179	All Organisms → cellular organisms → Bacteria	673	Open in IMG/M
3300012918\|Ga0137396_11280463	All Organisms → cellular organisms → Bacteria	511	Open in IMG/M
3300012922\|Ga0137394_10095885	All Organisms → cellular organisms → Bacteria	2494	Open in IMG/M
3300012923\|Ga0137359_10907449	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	759	Open in IMG/M
3300012925\|Ga0137419_11792409	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	525	Open in IMG/M
3300012927\|Ga0137416_10253191	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1439	Open in IMG/M
3300012927\|Ga0137416_10302089	All Organisms → cellular organisms → Bacteria	1327	Open in IMG/M
3300012927\|Ga0137416_10504185	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1043	Open in IMG/M
3300012927\|Ga0137416_12262420	All Organisms → cellular organisms → Bacteria	500	Open in IMG/M
3300012930\|Ga0137407_10947444	All Organisms → cellular organisms → Bacteria	815	Open in IMG/M
3300012972\|Ga0134077_10471707	All Organisms → cellular organisms → Bacteria	552	Open in IMG/M
3300012975\|Ga0134110_10316020	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	677	Open in IMG/M
3300012975\|Ga0134110_10623183	All Organisms → cellular organisms → Bacteria	503	Open in IMG/M
3300012976\|Ga0134076_10021007	All Organisms → cellular organisms → Bacteria	2315	Open in IMG/M
3300014150\|Ga0134081_10196815	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	683	Open in IMG/M
3300014154\|Ga0134075_10051163	All Organisms → cellular organisms → Bacteria	1706	Open in IMG/M
3300014154\|Ga0134075_10104016	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1200	Open in IMG/M
3300014154\|Ga0134075_10292560	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	708	Open in IMG/M
3300015054\|Ga0137420_1233322	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	760	Open in IMG/M
3300015054\|Ga0137420_1249829	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	539	Open in IMG/M
3300015245\|Ga0137409_10628227	All Organisms → cellular organisms → Bacteria	905	Open in IMG/M
3300015358\|Ga0134089_10360386	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	614	Open in IMG/M
3300015358\|Ga0134089_10440527	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	562	Open in IMG/M
3300017657\|Ga0134074_1325575	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	563	Open in IMG/M
3300017659\|Ga0134083_10332474	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	651	Open in IMG/M
3300020170\|Ga0179594_10286960	All Organisms → cellular organisms → Bacteria	623	Open in IMG/M
3300021046\|Ga0215015_10400106	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	888	Open in IMG/M
3300021046\|Ga0215015_10855123	All Organisms → cellular organisms → Bacteria	611	Open in IMG/M
3300025922\|Ga0207646_10616641	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	973	Open in IMG/M
3300026296\|Ga0209235_1017836	All Organisms → cellular organisms → Bacteria	3835	Open in IMG/M
3300026298\|Ga0209236_1085601	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1450	Open in IMG/M
3300026298\|Ga0209236_1099572	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1310	Open in IMG/M
3300026301\|Ga0209238_1249398	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	528	Open in IMG/M
3300026309\|Ga0209055_1007755	All Organisms → cellular organisms → Bacteria → Proteobacteria	5946	Open in IMG/M
3300026310\|Ga0209239_1018548	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	3495	Open in IMG/M
3300026313\|Ga0209761_1039803	All Organisms → cellular organisms → Bacteria	2729	Open in IMG/M
3300026313\|Ga0209761_1172248	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	995	Open in IMG/M
3300026313\|Ga0209761_1189434	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	921	Open in IMG/M
3300026315\|Ga0209686_1032520	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1998	Open in IMG/M
3300026328\|Ga0209802_1297347	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	535	Open in IMG/M
3300026331\|Ga0209267_1046138	All Organisms → cellular organisms → Bacteria → Proteobacteria	1985	Open in IMG/M
3300026332\|Ga0209803_1151406	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	897	Open in IMG/M
3300026333\|Ga0209158_1043441	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1876	Open in IMG/M
3300026333\|Ga0209158_1122682	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	971	Open in IMG/M
3300026334\|Ga0209377_1250261	All Organisms → cellular organisms → Bacteria	582	Open in IMG/M
3300026524\|Ga0209690_1002853	All Organisms → cellular organisms → Bacteria	9841	Open in IMG/M
3300026532\|Ga0209160_1195674	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	790	Open in IMG/M
3300026548\|Ga0209161_10505111	Not Available	535	Open in IMG/M
3300026551\|Ga0209648_10341395	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1038	Open in IMG/M
3300027655\|Ga0209388_1010784	All Organisms → cellular organisms → Bacteria	2455	Open in IMG/M
3300027875\|Ga0209283_10455045	All Organisms → cellular organisms → Bacteria	829	Open in IMG/M
3300027875\|Ga0209283_10872864	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	547	Open in IMG/M
3300027882\|Ga0209590_10056560	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales	2209	Open in IMG/M
3300027882\|Ga0209590_10856722	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	574	Open in IMG/M
3300028536\|Ga0137415_10532984	All Organisms → cellular organisms → Bacteria	983	Open in IMG/M
3300028536\|Ga0137415_11402020	All Organisms → cellular organisms → Bacteria	520	Open in IMG/M
3300032180\|Ga0307471_101556802	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	818	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	100.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	100.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	97.71%
Loam	Environmental → Terrestrial → Soil → Loam	2.29%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	58.02%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	38.93%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.76%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.76%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.76%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.76%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	39.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	25.19%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	14.50%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	13.74%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.29%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.53%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.76%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.76%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.76%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.76%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental	Open in IMG/M
3300002558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm	Environmental	Open in IMG/M
3300002562	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300002908	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300010301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015	Environmental	Open in IMG/M
3300010321	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09212015	Environmental	Open in IMG/M
3300010329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012410	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_16_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012972	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012975	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015	Environmental	Open in IMG/M
3300012976	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaG	Environmental	Open in IMG/M
3300014150	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300014154	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015	Environmental	Open in IMG/M
3300015054	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015358	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300017657	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09212015	Environmental	Open in IMG/M
3300017659	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300020170	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021046	Soil microbial communities from Shale Hills CZO, Pennsylvania, United States - 90cm depth	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026296	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026298	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026309	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110 (SPAdes)	Environmental	Open in IMG/M
3300026310	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026313	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026315	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126 (SPAdes)	Environmental	Open in IMG/M
3300026328	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129 (SPAdes)	Environmental	Open in IMG/M
3300026331	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137 (SPAdes)	Environmental	Open in IMG/M
3300026332	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138 (SPAdes)	Environmental	Open in IMG/M
3300026333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140 (SPAdes)	Environmental	Open in IMG/M
3300026334	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141 (SPAdes)	Environmental	Open in IMG/M
3300026524	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150 (SPAdes)	Environmental	Open in IMG/M
3300026532	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153 (SPAdes)	Environmental	Open in IMG/M
3300026548	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300027655	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1 (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12053J15887_104348921	3300001661	Forest Soil	MRTTKLLTTAALVTLGACAGGISVRTALSPDASLRGLHTFRVLPTPQAKIAGAVSSTNDPMLVNSISNRALRNDLAHEFASLGYVANDSNPDFCVAYYASTNQKLDVTYWDYGYAWRPHWWSGWGRRYGRGWGGDWGMQSSPM
JGI25385J37094_100974861	3300002558	Grasslands Soil	MRFTRFLTTTTLLAIGACAPGISVRTALSPDASLRGLRTFRVQPTPQPKIAGAVSSTNDPMLVNSISNRALRTDLAQEFAGLGYVASDSNPDFCIAYYASTNQKLDVTYWDYGYAWRPHWWSGWGRRYGRGWGGDWGIASAPTVTQYTEG
JGI25385J37094_102124101	3300002558	Grasslands Soil	MRTTQLLTTAALLALGACAPAISVRTALSPDVSLHGLRTFRVLPTPKPKIAGAVSSTNDPMLVNSISNRALRTDLAQEFAGLGYVASDSNPDF
JGI25382J37095_100454601	3300002562	Grasslands Soil	MRFTRFLTTTTLLAIGACAPGISVRTALSPDASLRGLRTFRVQPTPQPKIAGAVSSTNDPMLVNSISNRALRTDLAQEFAGLGYVASDSNPDFCIAY
JGI25382J37095_101225672	3300002562	Grasslands Soil	MRTTWFLTTATLLAIGACAPGISVRTALSPEASFTGLHTFRVSPTPQPKIAGAVSSTNDPMLVNSISNRALRTDLAQEFAGLGYVASDSNPDFCIAY
JGI25382J43887_103821131	3300002908	Grasslands Soil	MRTTQLLTTAALLALGACAPAISVRTALSPDVSLHGLRTFRVLPTPKPKIAGAVSSTNDPMLVNSISNRALRTDLAQEFAGLGYVASDSNPDFCVAYYASTKQQLDVTYWDYGYAWQPHW
Ga0066683_101122222	3300005172	Soil	MRTTLLLTAASLLTLGACAPGISVRTALSPDASLRGLHTFRVQPTPQPKIAGAVSSTNDPMLVNSISNRALRADLAQEFAGLGYVASDSNPDFCV
Ga0066683_104163332	3300005172	Soil	MRTTQLLTAAALLALGACAPAISVRTALSPDASLTGLHTFRVLPTPQPKIASAVSSTNDPMLVNSISNRALRADLAQEFAGLGYVASDSNPDFCVAYYASTNQKLDVTYWDYGYAWRPHWWSGWGR
Ga0066680_101308092	3300005174	Soil	MRATQLLTAAVLVALGACAPGISVRTALSPDASLHGLHTFRVLPTPKPKIAGAVSSTNDPMLVNSISNRALRTDLAQGFAGLGYVASDSNPDFCVAYYASTKQQLDVTYWDYGYAWRPRWWSGYG
Ga0066680_105731861	3300005174	Soil	MRTTHFLTAAVLVALGACAPGISVRTALSPDASLHGLHTFRVLPTPKPKIAGAVSSTNDPMLVNSISNRALRTDLAQEFAGLGYVASDSNPDFCVAYYASTKQQLDVTYWDYGYAWRPRWWSGYG
Ga0066697_104618482	3300005540	Soil	MRTTRLLTAASLLTLGACAPGISVRTALSPDASLRGLHTFRVQPTPQPKIAGAVSSTNDPMLVNSISNRALRADLAQEFAGLGYVASDSNPDFCV
Ga0066701_100287633	3300005552	Soil	MRTTRLLTAASLLTLGACAPGISVRTALSPDASLRGLHTFRVQPTPQPKIAGAVSSTNDPMLVNSISNRALRADLAQEFAGLGYVASDSNPDFCVAYYASTNQKLDVTYWDY
Ga0066701_103135831	3300005552	Soil	MRTTQLLTAAALLALGACAPAISVRTALSPDASLTGLHTFRVLPTPQPKVAGSVSSTNDPMLVNSISNRALRADLAQEFAGLGYVASDSNPDFCVA
Ga0066695_104654372	3300005553	Soil	MRLTQLVTAAAAAALTVTACAPGISVRTALSPDASLHGLHTFRVLATPQPKIAGAVSSTNDPMLVNSISNGALRTDLAQEFAGLGYVATDSNPDF
Ga0066692_102038651	3300005555	Soil	MRVTQLVAAAAAAALTLTACAGGISVRTALSPDASLHGLRTFRVLPTPQPKIAGAVSSTNDPMLVNSISNRALRSDLAQEFAGLGYVATDSNPDFC
Ga0066692_105908721	3300005555	Soil	MRMTQLLTGAGVLALAACAPAISVRTALSPDASVQGLHTFRVLPTPKPKIAGAVSSTNDPMLVNSISNRALRADLAQQFAGLGYVASDSNPDFCVAYYASTNQ
Ga0066692_106735852	3300005555	Soil	MRTTQFLTTAGLLALGACASAISVRTALSPDASLHGLRTFRVLPTPQPKIAGGVSSTNDPMLVNSISNRALRTDLAGEFTSLGYVATDSNPDFCIAYYASTNQKLDVT
Ga0066707_101317943	3300005556	Soil	MRTTQFLTTAALFALGACAGGISVRTALSPDASLHGLRTFRVQATPQPKLAGATSSTNDPMLVNSISNRALRADLTQEFAGLGYVASDSNPDFCVAYYASTNQKLDLTYWDYG
Ga0066704_101514712	3300005557	Soil	MRTTNFLTAAVLVALGACAPGISVRTALSPDASLHGLHTFRVLPTPKPKIAGAVSSTNDPMLVNSISNRALRTDLAQEFAGLGYVASDSNPDFCVAYYASTKQQLDVTYWDYGYAWRPRWWSGYG
Ga0066700_106689781	3300005559	Soil	MRTTHFLTAAVLVALGACAPGISVRTALSPDASLHGLHTFRVLPTPKPKIAGAVSSTNDPMLVNSISNRALRTDLAQEFAGLGYVASDSNPDFCVAYYASTKQQLDVTYWDYGYAWR
Ga0066708_102364011	3300005576	Soil	MRVTQLVAAAAAAAFTLTACAGGISVRTALSPDASLHGLRTFRVLPTPQPKIAGAVSSTNDPMLVNSISNRALRSDLAQEFAGLGYVATDSNPDFCVAYYASTNQKLDVTSWDYGYGWRPRWWSGWGRRYGRGWGGDWG
Ga0066691_104066342	3300005586	Soil	MRTTRLLTAASLLTLGACAPGISVRTALSPDASLRGLHTFRVQPTPQPKIAGAVSSTNDPMLVNSISNRALRADLAQEFAGLGYVASDSNPDFCVAYYASTNQKLDVTYWDYGYAWRPHWWS
Ga0066706_103490151	3300005598	Soil	VRTGQRSTHLVAVAAAAALTLGACAPAISVRTALSPDASLTGLHTFRVLPTPKPKIAGAVSSTNDPMLVNSISNRALRSDLAQEFAGLGYVASDSNPDFCVAYYAS
Ga0066653_106034151	3300006791	Soil	MRTTQLLTAAALLALGACAPAISVRTALSPDASLTGLHTFRVLPTPQPKIASAVSSTNDPMLVNSISNRALRADLAQEFAGLGYVASDSNPDFCVAYYASTNQKLDVTYWDYGYGGGRTGGAAGDTAADV
Ga0066658_107374771	3300006794	Soil	MRTTWFLTTAGLLALGACAPAISVRTALSPDVSLHGLRTFRVLPTPKPKIAGAVSSTNDPMLVNSISNRALRTDLAQEFAGLGYVASDSNPDFCVAYYASTKQQLDVTYWDYGYAWQPHWWSGWGR
Ga0066665_109982082	3300006796	Soil	MRSTHLVAVAAAAALTLGACAPAISVRTALSPDASLTGLHTFRVLPTPKPKIAGAVSSTNDPMLVNSISNRALRSDLAQEFAGLGYVASGRDARRAVHRRQHQRE
Ga0066659_101873871	3300006797	Soil	MRTTQLLTAAGLLALGACAPAISVRTALSPDASLTGLHTFRVLPTPQPKVAGSVSSTNDPMLVNSISNRALRADLAQEFAGLGYVASDSNPDF
Ga0066659_108737801	3300006797	Soil	MRIARLVPIAAVVGLAACASAVQVRTALSPDASLSGLRTFRVQPTPKPSIASAQSTSDPMLVNSISNRALRGDLRQGFEKLGYAVNDSTPDFCVAYYASTNQQLDITAWDYGYSLRPRW
Ga0066659_118241341	3300006797	Soil	MRMTQLVAAAAGAALTLTACAGGISVRTALSPDASLHGLRTFRVQQTPQPKLAGATSSTNDPMLVNSISNRALRTDLAQEFAGLGYVATDSNPDF
Ga0099793_102324781	3300007258	Vadose Zone Soil	MRIARFVSAAAVVALAACASAVQVRTALSPDASLNGLHTFRVQATPKPTIATAQSTSDPMLVNSISNRALRSDLRQGFEKLGYAVNDSTPDFCVAYYASTNQQLDISAYDYGYSFRPRWWRGWGPRYRS
Ga0099793_106737501	3300007258	Vadose Zone Soil	MRLTHLVTAAAAAALTLTACAPVISVRTALSPYASHLGLRTFRVLPTPTPKIAGAISSTNDPMLVNSISNRALRTDLTQEFAGLGYVAADSNPDFCVAYYASTNQKLDVTYW
Ga0066710_1013406302	3300009012	Grasslands Soil	MRLTQLVTAAAAAALTVTACAPGISVRTALSPDASLHGLHTFRVLATPQPKIAGAVSSTNDPMLVNSISNRTLRTDLAQEFAGLGYVATDSNPDFCVAYYASTNQKLDITYWDYGYALRPHWWSGWGRRWGRGWGGDWGIASGPVATQYTEG
Ga0066710_1047873901	3300009012	Grasslands Soil	MRTTQLLTAAALLALGACAPAISVRTALSPDASLTGLHTFRVLPTPQPKIASAVSSTNDPMLVNSISNRALRADLAQEFAGLGYVASDSNPDFCVAYYASTNQKLDV
Ga0099830_113143681	3300009088	Vadose Zone Soil	MTPFLSAAAAFTLAACASGIQVRTALSPDASLRGLHTFRVLPTPQPKIAGAISSANDPMLVNSISNRALRTDLAREFTGLGYVTRDSNPDFCVAYYASTKQQLDVNYWDYGYTW
Ga0099830_115121141	3300009088	Vadose Zone Soil	MTPFLSAAAAFTLAACASGIQVRTALSPDASLHGLHTFRVLPTPQPKIAGAISSANDPMLVNSISNRALRTDLAREFTGLGYVTRDSNPDFCVAYYASTKQQLDVNYWDYGYTW
Ga0099827_100958843	3300009090	Vadose Zone Soil	VQRARGDHDFTHKEKTMRTTQFLTAAALFALGACAPAISVRTALSPDASLTGLHTFRVLSTPQPKVAGAVSSTNDPMLVNSISNRALRADLAQEFAGLGYVASDSNPDFCVAYYASTNQKLDVTYW
Ga0099827_105014661	3300009090	Vadose Zone Soil	MRTRQLLMGATLLALGACASAISVRTALSPDASLHGLRTFRVQPTPQPKIAGATSSTNDPMLVNSISNRALRTDLTQEFAGLGYVASDSNPDFCVAYYASTNQKLDLTYWDYGYAWRPHWWSGWGRR
Ga0099827_106072741	3300009090	Vadose Zone Soil	MRFTRFLTTTTLLAIGACAPGISVRTALSPDASLRGLRTFRVQPTPQPKIAGAVSSTNDPMLVNSISNRALRTDLAQEFAGLGYVASDSNPDFCIAYYASTNQKLDVTYWDYGYAWRPHWWSGWGRRYG
Ga0099827_106116912	3300009090	Vadose Zone Soil	MRIARLVPIAAVVGLAACASAVQVRTALSPDASLSGLRTFRVQPTPKPSIASAQSTSDPMLVNSISNRALRTDLRQGFEKLGYAVNDSTPDFCVAYYASTNQQLDITTWDYGYSFRPRWWRGWGPRYGAMYQPMVTQYTQ
Ga0099827_110551421	3300009090	Vadose Zone Soil	MRTTWFLTTAALLAMGACAPGISVRTALSPDASLRGLRTFRVQPTPQPKIAGAVSSTNDPMLVNSISNRALRTDLAQEFAGLGYAATDSNPDFCIAYYASTNQKLDVTYWDYGYAWRPHWWSGWGRRYG
Ga0099827_117547171	3300009090	Vadose Zone Soil	MRTTQVLTAAVLVALGACAPGISVRTALSPDASLHGLHTFRVLPTPKPKIAGAVSSTNDPMLVNSISNRALRTDLAQEFAGLGYVVSDSNPDFCVAYYASTKQQLDV
Ga0066709_1013322212	3300009137	Grasslands Soil	MRIRQLLMGATLLALGACASGISVRTALSPDASLHGLRTFRVQPTPQPKLAGATSSTNDPMLVNSISNRALRTDLTQEFAGLGYVASDSNPDFCVAYYASTNQKLDLTYWDYG
Ga0066709_1031200981	3300009137	Grasslands Soil	VRTALSPDASLTGLHAFRVLPTPKPKIAGAVSSTNDPMLVNSISNRALRSDLAQEFAGLGYVASDSNPDFCVAYYASTNQKLDVTYWDYGYTWR
Ga0099792_102744482	3300009143	Vadose Zone Soil	MRFTRFLTTTTLLAIGACAPGISVRTALSPDASFTGLHTFRVSPTPQPKIAGAVSSTNDPMLVNSISNRALRTDLAQEFAGLGYVASDSNPDFCIAY
Ga0134070_103528341	3300010301	Grasslands Soil	MRLTQLVTAAAAAALTVTACAPGISVRTALSPDASLHGLHTFRVLATPQPKIAGAVSSTNDPMLVNSISNRALRTDLAQEFAGLGYVATDSNPDFCVAYYAS
Ga0134067_101177002	3300010321	Grasslands Soil	MRVTQLVAAAAAAAFTLTACAGGISVRTALSPDASLHGLRTFRVLPTPQPKIAGAVSSTNDPMLVNSISNRALRTDLAGEFTSLGYVATDSNPDFCIAYYASTNQKLDVTSWDYGYGWRPRWWSGWGSRYGRGWGGGC
Ga0134067_103819751	3300010321	Grasslands Soil	MRTTQLLTAAALSAVVACAPAISVRTALSPDVSLTGLHTFRVLPTPKPKIAGAVASTNDPMLVNSISNRALRTDLTQEFSGLGYMASDSNPDFCVAYYASTNQKLDLTYWDYGYALRPHWWGGWGRRW
Ga0134111_100666152	3300010329	Grasslands Soil	MRTTQFLTTAGLLALGACASAISVRTALSPDASLHGLRTFRVLPTPQPKIAGAVSSTNDPMLVNSISNRALRTDLAGEFTSLGYVATDSNPDFCIAYYASTNQKLDVTYWDYGYGWQPRWWSGWDAAGDGAGGGTGESKAARW*
Ga0134071_102298551	3300010336	Grasslands Soil	MRTRQLLMGATLLALGACASAISVRTALSPDASLHGLRTFRVQPTPQPKLAGATSSTTDPMLVNSISNRALRTDLTQEFAGLGYVASDSNPDFCVAYYASTNQKLDLTYWDYGYAWRPNW
Ga0134062_107784911	3300010337	Grasslands Soil	MRTTQFLTTAALFALGACAGGISVRTALSPDASLHGLRTFRVQATPQPKLAGAASSNNDPMLVNSISNRALRADLTQEFAGLGYVASDSNPDFCVAYYASTNQKLDLTYWDYGYGWRPRWWSGWGRRYGRGWGGDWGLQSG
Ga0134125_101127511	3300010371	Terrestrial Soil	MGITRIMTTVTLVAVGACAPGISVRTALSPDASLHGLRTFRVLPTPKPKIAGVVSSTNDPMLVNSISNRALRTDLAQEFAGLGYVASDSNPDFCVAYYASTNQKLDVTYWDYGYAWRPHWWG
Ga0134122_100026331	3300010400	Terrestrial Soil	MRLTQLVTAAAAAAITLTACAPGISVRTALSPDASLHGLRTFRVLPTPKPKIAGVAASTNDPMLVNSISNRALRSDLAQEFAGLGYVPTDSNPDFCIAYYASTNQKLDVTYWDY
Ga0134122_108943172	3300010400	Terrestrial Soil	MTTVTLIAVGACAPGISVRTALSPDASLHGLRTFRVLPTPKPKIAGAVSSTNDPMLVNSISNRALRTDLAQEFAELGYVASDSNPDFCVAYYASTNQKLDVTYWDY
Ga0137392_103216972	3300011269	Vadose Zone Soil	MTLLVPTAAVVALAACAPAVQVRTALSPDASLGGLRTFRVQPTPKPHIARAQSTSDPMLVNSISNRALRADLRQGFEKLGYAVNDSTPDFCVAYYAST
Ga0137391_100260437	3300011270	Vadose Zone Soil	MRIARFVPTAAVVALAACTSAVQVRTALSPDASLNGLRTFRVQPTPKPSIASAQSTNDPMLVNSISNRALRADLRQGFEKLGYAVNDSTPDFCVAYYASTNQQLDITTYDYGYSF
Ga0137389_110866782	3300012096	Vadose Zone Soil	MRTTQLLTTAAVLALGACASAISVRTALSPDASLHGLRTFRVQPTPQPKLAGAVSSTNDPMLVNSISNRALRSDLAGEFTSLGYVATDSNPDFCIAYYASTSQKLDVT
Ga0137382_101830603	3300012200	Vadose Zone Soil	MRTTQFLTTAALFALGACAGGISVRTALSPDASLHGLRTFRVEATPQPKLAGATSSTNDPMLVNSISNRALRTDLTQEFAGLGYVASDSNPDFCVAYYASTNQKLDLTYWDYGYGWRPSWWSGW
Ga0137399_109195181	3300012203	Vadose Zone Soil	MVGAKAGGDHHFPQQEHTMRTTQFLTTAALLALGACAPGISVRTALSPDASVHGLRTFRVLPTPQPKIAGAVASTSDPMLVNSISNRALRTDLAQEFASLGYVASDSNPDFCIAYYA
Ga0137399_114973641	3300012203	Vadose Zone Soil	MRIALLVPTAAVVALAACASGVQVRTALSPDASLTGLRTFRVEQTPKPKIANAQSNSDPMLVNSISNRALRSDLQQGFEKLGYAVNDSTPDFCVAYYASTNQQL
Ga0137362_107042321	3300012205	Vadose Zone Soil	MRIARFVPAAAVVALAACASAVQVRTALSPDASLTGLRTFRVEQTPKPRIASAQSNSDPMLVNSISNRALRSDLQQGFEKLGYAINDSTPDFCVAYYASTNQELDISAWDYGYPLRPRWWRGWGPRY
Ga0137362_111071262	3300012205	Vadose Zone Soil	MRLTQIVTAAAAAAITLTACAPGISVRTALSPNATLHGLRTFRVQPTPQPKIAGAVSSTNDPMLVNSISNRALRSDLAQEFAGLGYVATDSNP
Ga0137381_115915331	3300012207	Vadose Zone Soil	MVGAKAMRRPRLHTPQEKTMRTTQFLTTAALFALGACAGGISVRTALSPDASLHGLRTFRVQATPQPKLAGATSSTNDPMLVNSISNRALRTDLAQEFAGLGYVATDSNPDFCVAYYASTNQKLD
Ga0137379_103562661	3300012209	Vadose Zone Soil	MRLTQLVTAAAAAALTVTACAPGISVRTALSPDASLHGLHTFRVLPTPQPKIAGAASSTNDPMLVNSISNRALRTDLTQEFAGLGYVATDSNPDFCVAYYASTNQKLDITYWDYGYGLRPHWW
Ga0137377_115758282	3300012211	Vadose Zone Soil	MRTTPLLTTAALLGLGACASAISVRTALSPDASLRGLRTFRVLPTPQPKIAGADSSTNDPMLVNSISNRALRADLAEKFAGLGYVASDSNPDFCVAYYASTNQKLDI
Ga0137360_116843651	3300012361	Vadose Zone Soil	MTQLLTGAGVLALAACAPAISVRTALSPDASVQGLHTFRVLPTPKPKIAGAVSSTNDPMLVNSISNRALRADLAQEFAGLGYVATDSNPDFCVAYYASTKQ
Ga0137361_105356881	3300012362	Vadose Zone Soil	MRLARFVPTAAVVALAACASAVQVRTALSPEASLSGLHTFRVQPTPKPSIASAQSSSDPMLVNSISNRALRGDLRQGFEKLGYAVNDSTPDFCVAYYASTNQQLDITAWDYGYSLRPRWWRGWGPRYRDMYE
Ga0137390_106063712	3300012363	Vadose Zone Soil	MRIARFVPTAAVVALAACTSAVQVRTALSPDASLSGLRTFRVQPTPKPSIASAQSTNDPMLVNSISNRALRADLGHGFEKLGYAVNDSAPDFCVAYYASTNQQFDVTTYDYGYSFRPRWWRGWGPRYRDVYAPMVTQYTQGTVIV
Ga0134060_14948711	3300012410	Grasslands Soil	LTAASLLTLGACAPGISVRTALSPDASLRGLHTFRVQPTPQPKIAGAVSSTNDPMLVNSISNRALRADLAQEFAGLGYVASDSNPDFCVAYYASTNQKLDVTYWDYGYAWRPHWWSGWG
Ga0137398_107606132	3300012683	Vadose Zone Soil	MRIARFVPAAVVALAACASAVQVRTALSPDASLTGLRTFRVEQTPKPKIANAQSNSDPMLVNSISNRALRSDLQQGFEKLGYAINDSTPDFCVAYYASTNQQLDITAWDYGYSLRPRWWRGWGPRYRD
Ga0137398_112314771	3300012683	Vadose Zone Soil	MRITRFLTTTALLAIAACAPGISVRTALSPDASLTGLRTFRVSATPQPKIAGAVSSTNDPMLVNSISNRALRTDLAQEFTGLGYVASDSNPDFCIAYYASTNQKLDVTYWDYGYAWRPHWWSGWGRRYGRGW
Ga0137396_101201131	3300012918	Vadose Zone Soil	MRLTRFLTTTTLLAIGACAPGISVRTALSPDASLTGLHTFRVSQTPQPKIAGAVSSTNDPMLVNSISNRALRTDLAQEFASLGYVASDSNPDFCIAYYASTNQKLDVTYWDYGYAWR
Ga0137396_104618492	3300012918	Vadose Zone Soil	MRIALLVPTAAVVALAACASGVQVRTALSPDASLTGLRTFRVEQTPKPKIANAQSNSDPMLVNSISNRALRADLQQGFEKLGYAVNDSTPDFCVAYYASTDQKLDITAWDYGYPYRPHRWRGWGFYQPRFGA
Ga0137396_105174321	3300012918	Vadose Zone Soil	MRTILLVPTAAVLALAACAPAVQVRTALSPDASLAGLHSFTVLPTPTPRIANAPSLGANDPMLVNSISNRALRTDLQQQFSKLGYVVNDSTPDFAVAYYACTKPKTDITFWDYGYPLRPRWWRGWGPRFGAYNAPMVTEYTQGTVIVD
Ga0137396_105709811	3300012918	Vadose Zone Soil	MTLLVAAATAVTLMACAPGISVRTALSPDASLHGLQTFRVLPTPQPKIAGAVSSTNDPMLVNSISNRALRSDLAQEFAGLGYVASDSNPDFCVAYYASTNQKLDVTYWDYGYGWRPRWWSGWG
Ga0137396_108441791	3300012918	Vadose Zone Soil	MQHPIEELVHTHTEENVMRIALLVPTAAVVALAACASGVQVRTALSPDASVSGLRTFRVEATPQPSIASTQSTNDPMLVNSISNRALRADLQQGFEKLGYAINDSTPDFCVAYYASTTQKLDITSWNYGYPFRPRAWRGW
Ga0137396_112804631	3300012918	Vadose Zone Soil	MRIALLVPTAAVLTLAACSPVQVRTAVSPDASLTGLHTFRVEATPQARSGSQPSSNDPMLVNSISNRALRTDLQQGFAKLGYAVNDSAPDFCVAYYASTDQKLDITSWDYGYPFRPRRWRGWGFYQPRFGAA
Ga0137394_100958854	3300012922	Vadose Zone Soil	MRIAGFVPAAAVVALAACASAVQVRTALSPDASLTGLRTFRVEQTPKPKIANAQSNSDPMLVNSISNRALRSDLQQGFEKLGYAVNDSTPDFCVAYYASTNQQLDITGWDYGYPFRPRRWAGWGFYQPRFGAAFDPM
Ga0137359_109074491	3300012923	Vadose Zone Soil	MVGAKAMRRPRLHTPQEKTMRTTQFLTTAALFALGACAGGISVRTALSPDASLHGLRTFRVQPTPQPKLAGATSSTNDPMLVNSISNRALRADLAQEFAGRGYVATDSNPDFCVAYYASTNQKLDVTYWDYGY
Ga0137419_117924091	3300012925	Vadose Zone Soil	LTAAAALLAVGACAPAVSVRTALSPDASLRGLRTFRVQPTPQPKIAGAVSSTNDPMLVNSISNRALRADLAQEFAELGYVASDSNPDF*
Ga0137416_102531912	3300012927	Vadose Zone Soil	MRTTRLLTAAALLTLGACAPGISVRTALSPDASLRGLHTFRVQPTPQPKIAGAVSSTNDPMLVNSISNRALRADLAQEFAGLGYVASDSNPDFCVAYYASTNQKLDVTYWDYGYAWRPHWWSGWGRRYGRGWGGDWGIQTAP
Ga0137416_103020891	3300012927	Vadose Zone Soil	MRVTQLVAAAAAAALTLTACAGGISVRTALSPDASLHGLHTFRVLPTPQPKIAGAVSSTNDPMLVNSISNRALRTDLAGEFASLGYVATDSNPDFCVAYYASTNQKLDVTSWDYGYGWRPRWWSGWGRRYGRGWGGDWGMQSGPVVTQYTEGTV
Ga0137416_105041852	3300012927	Vadose Zone Soil	MRFTRFLTTTTLLAIGACAPGISVRTALSPDASFTGLHTFRISPTPQPKIAGAVSSTNDPMLVNSISNRALRTDLAQEFAGLGYVASDSNPDFCIAYYA
Ga0137416_122624202	3300012927	Vadose Zone Soil	MTQLLTTAAALTLAACGPAVQVRTAISPDAGFSALRTFKVLPTPTPRIADVQSEGGGANDPMLVNSLSNRALRADLAQAFTGLGYVANDSNPDFAVAYYACTKQKTDITYWDYG*
Ga0137407_109474441	3300012930	Vadose Zone Soil	MTQLVTAAAGAALTLTACAGGISVRTALSPDASLHGLRTFRVQQTPQPKIAGAVSSTNDPMLVNSISNRALRTDLTQEFAGLGYVATDSNPDFCVAYYASTNQKLDVTYWDYGYGWRPNWWSG
Ga0134077_104717071	3300012972	Grasslands Soil	MRVTQLVAAAAAAAFTLTACAGGISVRTALSPDASLHGLRTFRVLPTPQPKIAGAVSSTNDPMLVNSISNRALRTDLAGEFTSLGYVATDSNPDFCIAY
Ga0134110_103160202	3300012975	Grasslands Soil	MRVTQLVAAAAAAAFTLTACAGGISVRTALSPDASLHGLRTFRVLPTPQPKIAGAVSSTNDPMLVNSISNRALRSDLAQEFAGLGYVATDSNPDFCIA
Ga0134110_106231831	3300012975	Grasslands Soil	MTQLVAAAAGAALTLTACAGGISVRTALSPDASLHGLRTFRVQQTPQPKLAGATSSTNDPMLVNSISNRALRADLTQEFAGLGYVASDSNPDFCVAYYASTNQKLDLTYWDYGYGWRPSWWSGWGR
Ga0134076_100210073	3300012976	Grasslands Soil	MRTTRLLTAASLLTLGACAPGISVRTALSPDASLRGLHTFRVQPTPQPKIAGAVSSTNDPMLVNSISNRALRADLAQEFAGLGYVASDSNPDFCVAYYASTNQ
Ga0134081_101968152	3300014150	Grasslands Soil	MRTTQLLTTAALLALGACAPAISVRTALSPDVSLHGLRTFRVLPTPKPKIAGAVSSTNDPMLVNSISNRALRTDLAQEFAGLGYVASDSNPDFCVAYYASTKQQLDVTYWDYGYAWQ
Ga0134075_100511633	3300014154	Grasslands Soil	MRFTRFLTTTTLLAIGACAPGISVRTALSPDASLRGLRTFRVQPTPQPKIAGAVSSTNDPMLVNSISNRALRTDLAQEFAGLGYVASDSNPDFCIAYYASTNQKLDVTYWDYG
Ga0134075_101040162	3300014154	Grasslands Soil	MRTRQLLMGATLLALGACASTISVRTALSPDASLDGLRTFRVQPTPQPKLAGATSSTTDPMLVNSISNRALRTDLTEQFAGLGYVATDSNPDFCVAYYAST
Ga0134075_102925602	3300014154	Grasslands Soil	MRTTQLLTAAALLALGACAPAISVRTALSPDASLTGLHTFRVLPTPQPKIASAVSSTNDPMLVNSISNRALRADLAQEFAGLGYVASDSNPDFCVAYYASTNQKLDVTYWDYGYA
Ga0137420_12333221	3300015054	Vadose Zone Soil	MRITRFLTTTALLAIAACAPGISVRTALSPDASLTGLRTFRVSATPQPKIAGAVSSTNDPMLVNSISNRALRTDLAQEFTGLGYVASDSNPDFCIAYYASTNQKLDVTYWDYGYAWRPHWWSGWGRRYGRYGRGW
Ga0137420_12498291	3300015054	Vadose Zone Soil	MRTTKLLTTAALVALGACAGGISVRTALSPDASLRGLHTFRVLPTPQAKIAGAVSSTNDPMLVNSISNRALRNDLAHEFASLGYVANDSNPDFCVAYYASTNQKLDVTYWDYGYAWRPHWWSGWGRRYGRGWGGDWGVQSSPMVTQYTEG
Ga0137409_106282271	3300015245	Vadose Zone Soil	MRLTQLVTAAAAATLTLTACAPGISVRTALSPDASVHGLRTFRVLPTPQPKIAGAVSSTNDPMLVNSISNRALRTDLAGEFASLGYVATDSNPDFCVAYYASTNQKLDVTSWDYGYGWRPRWWSGWGRRYGRGWGGDWGMQS
Ga0134089_103603861	3300015358	Grasslands Soil	MRFTRFLTTTTLLAIGACAPGISVRTALSPDASLRGLRTFRVQPTPQPKIAGAVSSTNDPMLVNSISNRALRTDLAQEFAGLGYVASDSNPDFCIAYYASTNQKLDVTYWDYGYAWRPHWWSGWGRR
Ga0134089_104405271	3300015358	Grasslands Soil	MRIRQLLMGATLLALGACASAISVRTALSPDASLHGLRTFRVQPTPQPKLAGATSSTNDPMLVNSISNRALRTDLTQEFAGLGYVASDSNPDFCVA
Ga0134074_13255751	3300017657	Grasslands Soil	MRTTQFLTTAGLLALGACASAISVRTALSPDASLHGLRTFRVLPTPQPKIAGGASSTNDPMLVNSISNRALRTDLAGEFTSLGYVATDSNPDFCVAYYASTNQKLDITYWDYGYGWRPNWWSGWGRR
Ga0134083_103324741	3300017659	Grasslands Soil	MRFTRFLTTTTLLAIGACAPGISVRTALSPDASLRGLRTCRVQPTPQPKIAGAVSSTNDPMLVNSISNRALRTDLAQEFAGLGYVASDSNPDFCIAYYASTNQKLDVTYWDYGYAWRPHWWSGWGRR
Ga0179594_102869601	3300020170	Vadose Zone Soil	MRIARLVPIAAVVGLAACASAVQVRTALSPDASLSGLRTFRVQPTPRPSIASAQSTSDPMLVNSISNRALRGDLRQGFEKLGYAVNDSTPDFCVAYYASTNQQLDITAWDYGYSLRPRWWRGWGPR
Ga0215015_104001061	3300021046	Soil	MRMTPLLSAAAAFTLAACASGIQVRTALSPDASLRGLHTFRVLPTPKPKIAGAVSSTNEPMLVNSISNRALRTDLAREFAGLGYVATDTNPDFCVAYYASTNKQLDVSHLSLIHI
Ga0215015_108551231	3300021046	Soil	MRMKPFLSVAAAFTLSACASGIQVRTALSPDASLRGLHTFRVLPTPKPKIAGAVSSTTDPMLVNSISNRALRADLAREFAGLGYVATDSNPDFCVAYYASTKQQLDVSYFDYGYTWQPRWWSGWGRRWGRGWGPDWGMQ
Ga0207646_106166411	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MRMTQLLTGAGVLALAACAPAISVRTALSPDASVQGLHTFRVLPTPKPKIAGAVSSTNDPMLVNSISNRALRADLAQEFAGLGYVATDSNPDFCVAYYASTKQQLDVTYWDYGYAW
Ga0209235_10178361	3300026296	Grasslands Soil	MRATQLLTAAVLVALGACAPGISVRTALSPDASLHGLHTFRVLPTPKPKIAGAVSSTNDPMLVNSISNRALRTDLAQGFAGLGYVASDSNPDFCVAYYASTKQQLDVTYWDY
Ga0209236_10856012	3300026298	Grasslands Soil	MRTTQLLTTAALLALGACAPAISVRTALSPDVSLHGLRTFRVLPTPKPKIAGAVSSTNDPMLVNSISNRALRTDLAQEFAGLGYVASDSNPDFCVAYYASTK
Ga0209236_10995722	3300026298	Grasslands Soil	MRTTHFLTAAVLVALGACAPGISVRTALSPDASLHGLHTFRVLPTPKPKIAGAVSSTNDPMLVNSISNRALRTDLAQEFAGLGYVASDSNPDFCVAYYASTKQQLDVTYWDYGYAWRPRW
Ga0209238_12493981	3300026301	Grasslands Soil	MRTTQLLTAAALLALGACAPAISVRTALSPDVSLHGLRTFRVLPTPKPKIAGAVSSTNDPMLVNSISNRALRTDLAQEFAGLGYVASDSNPDFCVAYYASTKQQL
Ga0209055_10077551	3300026309	Soil	MRTTQLLTTAVLLALGACAPAVSVRTALTPDVSLRGLRTFRVQPTPKPKIAGAVSSTNDPMLVNSISNRALRNDLMQEFAGLGYVASDSTPDFCVAYYASTNQKLDVTYWDYGYAWQPH
Ga0209239_10185481	3300026310	Grasslands Soil	MRTTRLLTAASLLTLGACAPGISVRTALSPDASLRGLHTFRVQPTPQPKIAGAVSSTNDPMLVNSISNRALRADLAQEFAGLGYVASDSNPDFCVAYYASTNQKLDVTYWDYGYAWRPHW
Ga0209761_10398031	3300026313	Grasslands Soil	MRATQLLTAAVLVALGACAPGISVRTALSPDASLHGLHTFRVLPTPKPKIAGAVSSTNDPMLVNSISNRALRTDLAQGFAGLGYVASDSNPDFCVAYYASTKQQLDVTYWDYGYAWRPRW
Ga0209761_11722481	3300026313	Grasslands Soil	MRTTQFLTTAALLALGACAPGISVRTALGPDASLHGLRTFRVLPTPKPKIVGAVSSTNDPMLVNSISNRALRNDLVQEFAGLGYVASDSNPDFCVAYYASTNQKLD
Ga0209761_11894341	3300026313	Grasslands Soil	MRTTQFLTAAVLVALGACAPGISVRTALSPDASLHGLHTFRVLPTPKPKIAGAVSSTNDPMLVNSISNRALRTDLAQEFAGLGYVASDSNPDFC
Ga0209686_10325201	3300026315	Soil	MRTRQLLMGATLLALGACAEGVSVRTALSPDASLHGLRTFRVQQTPQPKLAGATSSTNDPMLVNSISNRALRTDLTQEFAGLGYVASDSNPDFCVAYYASTNQKLDLTY
Ga0209802_12973471	3300026328	Soil	MRTTQFLTTAGLLALGACASAISVRTALSPDASLHGLRTFRVLPTPQPKIAGAVSSTNDPMLVNSISNRALRTDLAGEFTSLGYVATDSNPDFC
Ga0209267_10461383	3300026331	Soil	MRTTQLLTTAVLLALGACAPAVSVRTALTPDVSLRGLRTFRVQPTPKPKIAGAVSSTNDPMLVNSISNRALRNDLVQEFAGLGYVASDSTPD
Ga0209803_11514061	3300026332	Soil	MRTTQLLTAAALLALGACAPAISVRTALSPDASLTGLHTFRVLPTPQPKVAGAVSSTNDPMLVNSISNRALRADLVQEFAGLGYVASDSNPDFCVAYYASTNQKLDVTYWDYGYAWRPHWWSGW
Ga0209158_10434411	3300026333	Soil	MRTTQLLTAAGLVALGACAPGISVRTALSPDASLHGLHTFRVLPTPKPKIAGAVSSTNDPMLVNSISNRALRTDLAQGFAGLGYVASDSNPDFCVAYYASTKQQLDVTYWDYGYAWRPRWWSGYGRR
Ga0209158_11226821	3300026333	Soil	MRTTNFLTAAVLVALGACAPGISVRTALSPDASLHGLHTFRVLPTPKPKIAGAVSSTNDPMLVNSISNRALRTDLAQEFAGLGYVASDSNPDFCVAYYASTKQQLDVTYWDYGYAWRPRWWSGYGRR
Ga0209377_12502611	3300026334	Soil	MRVTQLVAAAAAAALTLTACAGGISVRTALSPDASLHGLRTFRVLPTPQPKIAGAVSSTNDPMLVNSISNRALRSDLAQEFAGLGYVATDSNPDFCVAYYASTNQKLDVTYWDYGYGWRPNWWSG
Ga0209690_10028531	3300026524	Soil	MRTTRLLTAASLLTLGACAPGISVRTALSPDASLRGLHTFRVQPTPQPKIAGAVSSTNDPMLVNSISNRALRADLAQEFAGLGYVASDSNPDFCVAY
Ga0209160_11956741	3300026532	Soil	MRTTNFLTAAVLVALGACAPGISVRTALSPDASLHGLHTFRVLPTPKPKIAGAVSSTNDPMLVNSISNRALRTDLAQEFAGLGYVASDSNPDFCVAYYASTKQQLDVTYWDYGYAWRPRW
Ga0209161_105051111	3300026548	Soil	MRVTQLVAAAAAAALTLTACAGGISVRTALSPDASLHGLRTFRVLPTPQPKIAGAVSSTNDPMLVNSISNRALRSDLAQEFAGLGYVATDSNPDFCVAYYASTNQKLDVTSWDYGYGWRPRWWSGWGRRYGRGWGGDWGLQSGPVVTQYTEG
Ga0209648_103413952	3300026551	Grasslands Soil	MRIPLLVPAAAVFALAACTSAVQVRTALSPDASLSGLRTFRVQPTPKPSIASAQSTNDPMLVNSISNRALRADLRQGFEKLGYAVNDSTPDFCVAYYASTNQQFDVTTYDYGYSFRPRWWRGWGPRYRDVYAPM
Ga0209388_10107844	3300027655	Vadose Zone Soil	MRIARFVPAAAVVALAACASAVQVRTALSPDASLTGLRTFRVEQTPKPRIANAQSNSDPMLVNSISNRALRSDLQQGFEKLGYAINDSTPDFCVAYYASTNQQLDITTWDYGYSFRPRWWRGWGP
Ga0209283_104550452	3300027875	Vadose Zone Soil	MRIALLVPTAAVVALAACASAVQVRTALSPDASLSGLRTFRVQPTPKPSIASAQSANDPMLVNSISNRALRADLQRGFAKLGYAVNDSTPDFCVAYYASTNQQLDITTYDYGYSLRP
Ga0209283_108728641	3300027875	Vadose Zone Soil	MRMTPFLSAAAAFTLAACASGIQVRTALSPDASLHGLHTFRVLPTPQPKIAGAISSANDPMLVNSISNRALRTDLAREFTGLGYVTRDSNPDFCV
Ga0209590_100565601	3300027882	Vadose Zone Soil	MRFTRFLTTTTLLAIGACAPGISVRTALSPDASLRGLRTFRVQPTPQPKIAGAVSSTNDPMLVNSISNRALRTDLAQEFAGLGYVASDSNPDFCI
Ga0209590_108567221	3300027882	Vadose Zone Soil	MRTTQFLTAAALFALGACAPAISVRTALSPDASLTGLHTFRVLSTPQPKVAGAVSSTNDPMLVNSISNRALRADLAQEFAGLGYVASDSNPD
Ga0137415_105329841	3300028536	Vadose Zone Soil	MRVTQLVAAAAAAALTLTACAGGISVRTALSPDASLHGLHTFRVLPTPQPKIAGAVSSTNDPMLVNSISNRALRTDLAGEFASLGYVATDSNPDFCVAYYASTNQKLDVTSWDYGYGWRPRWWSGWGRRYGRGWGGDWGMQSGPVVTQYTEG
Ga0137415_114020201	3300028536	Vadose Zone Soil	MRMTQLLTTAAALTLAACGPAVQVRTAISPDAGFSALRTFKVLPTPTPRIADVQSEGGGANDPMLVNSLSNRALRADLAQAFTGLGYVANDSNPDFAVAYYACTKQKTDITYWDYG
Ga0307471_1015568022	3300032180	Hardwood Forest Soil	MRMTQFLTGAGVLALAACAPAISVRTALSPDASVQGLHTFRVLPTPKPKIAGAVSSTNDPMLVNSISNRALRADLAQEFAGLGYVATDSNPDFCVAYYASTKQQLDVTYWD

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F061727

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences