Metagenome Family F061724

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F061724
Family Type	Metagenome
Number of Sequences	131
Average Sequence Length	71 residues
Representative Sequence	MMTGSAPLLFEEATNADGVWTLVVRSSDGVVGHIFRAVGEYGYFAGRFNAFTATFRDPSLERLKKRIVASRR
Number of Associated Samples	80
Number of Associated Scaffolds	131

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	3.82 %
% of genes near scaffold ends (potentially truncated)	19.08 %
% of genes from short scaffolds (< 2000 bps)	73.28 %
Associated GOLD sequencing projects	72
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.47

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (99.237 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere (26.718 % of family members)
Environment Ontology (ENVO)	Unclassified (38.168 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (68.702 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 14.00% β-sheet: 27.00% Coil/Unstructured: 59.00%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.47
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.47
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 131 Family Scaffolds
PF00072	Response_reg	7.63
PF05899	Cupin_3	3.05
PF04226	Transgly_assoc	3.05
PF01381	HTH_3	3.05
PF10091	Glycoamylase	2.29
PF13493	DUF4118	1.53
PF00118	Cpn60_TCP1	1.53
PF02518	HATPase_c	1.53
PF05494	MlaC	1.53
PF04392	ABC_sub_bind	0.76
PF13592	HTH_33	0.76
PF00052	Laminin_B	0.76
PF00027	cNMP_binding	0.76
PF09123	DUF1931	0.76
PF03118	RNA_pol_A_CTD	0.76
PF01695	IstB_IS21	0.76
PF07589	PEP-CTERM	0.76
PF01988	VIT1	0.76
PF07690	MFS_1	0.76
PF12844	HTH_19	0.76
PF08734	GYD	0.76
PF08282	Hydrolase_3	0.76

COG ID	Name	Functional Category	% Frequency in 131 Family Scaffolds
COG2261	Uncharacterized membrane protein YeaQ/YmgE, transglycosylase-associated protein family	General function prediction only [R]	3.05
COG0459	Chaperonin GroEL (HSP60 family)	Posttranslational modification, protein turnover, chaperones [O]	1.53
COG2854	Periplasmic subunit MlaC of the ABC-type intermembrane phospholipid transporter Mla	Cell wall/membrane/envelope biogenesis [M]	1.53
COG0202	DNA-directed RNA polymerase, alpha subunit/40 kD subunit	Transcription [K]	0.76
COG0560	Phosphoserine phosphatase	Amino acid transport and metabolism [E]	0.76
COG0561	Hydroxymethylpyrimidine pyrophosphatase and other HAD family phosphatases	Coenzyme transport and metabolism [H]	0.76
COG1484	DNA replication protein DnaC	Replication, recombination and repair [L]	0.76
COG1633	Rubrerythrin, includes spore coat protein YhjR	Inorganic ion transport and metabolism [P]	0.76
COG1814	Predicted Fe2+/Mn2+ transporter, VIT1/CCC1 family	Inorganic ion transport and metabolism [P]	0.76
COG1877	Trehalose-6-phosphate phosphatase	Carbohydrate transport and metabolism [G]	0.76
COG2217	Cation-transporting P-type ATPase	Inorganic ion transport and metabolism [P]	0.76
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	0.76
COG3769	Mannosyl-3-phosphoglycerate phosphatase YedP/MpgP, HAD superfamily	Carbohydrate transport and metabolism [G]	0.76
COG4274	Uncharacterized conserved protein, contains GYD domain	Function unknown [S]	0.76

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	99.24 %
Unclassified	root	N/A	0.76 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	99.24 %
Unclassified	root	N/A	0.76 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	99.24 %
Unclassified	root	N/A	0.76 %

Name	Rank	Taxonomy	Distribution
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	80.92 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.05 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.76 %
Unclassified	root	N/A	0.76 %

Name	Rank	Taxonomy	Distribution
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	80.92 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.76 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.76 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.76 %
Unclassified	root	N/A	0.76 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	80.92 %
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	0.76 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.76 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.76 %
Unclassified	root	N/A	0.76 %

Name	Rank	Taxonomy	Distribution
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	70.99 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.76 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.76 %
Alcaligenaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae	0.76 %
Unclassified	root	N/A	0.76 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	70.99 %
unclassified Alcaligenaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → unclassified Alcaligenaceae	0.76 %
Cystobacterineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae	0.76 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.76 %
Unclassified	root	N/A	0.76 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	70.99 %
Alcaligenaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → unclassified Alcaligenaceae → Alcaligenaceae bacterium	0.76 %
Archangiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae	0.76 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.76 %
Unclassified	root	N/A	0.76 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	70.99 %
Stigmatella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae → Stigmatella	0.76 %
Alcaligenaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → unclassified Alcaligenaceae → Alcaligenaceae bacterium	0.76 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.76 %
Unclassified	root	N/A	0.76 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	70.99 %
Stigmatella aurantiaca	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae → Stigmatella → Stigmatella aurantiaca	0.76 %
Alcaligenaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → unclassified Alcaligenaceae → Alcaligenaceae bacterium	0.76 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.76 %
Unclassified	root	N/A	0.76 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	70.99 %
Stigmatella aurantiaca DW4/3-1	strain	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae → Stigmatella → Stigmatella aurantiaca → Stigmatella aurantiaca DW4/3-1	0.76 %
Alcaligenaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → unclassified Alcaligenaceae → Alcaligenaceae bacterium	0.76 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.76 %
Unclassified	root	N/A	0.76 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300005171\|Ga0066677_10125895	All Organisms → cellular organisms → Bacteria	1382	Open in IMG/M
3300005176\|Ga0066679_10427390	All Organisms → cellular organisms → Bacteria	867	Open in IMG/M
3300005176\|Ga0066679_10910026	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	553	Open in IMG/M
3300005176\|Ga0066679_10912506	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	552	Open in IMG/M
3300005177\|Ga0066690_10160177	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1483	Open in IMG/M
3300005178\|Ga0066688_10210823	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1236	Open in IMG/M
3300005181\|Ga0066678_10114985	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae → Stigmatella → Stigmatella aurantiaca → Stigmatella aurantiaca DW4/3-1	1645	Open in IMG/M
3300005181\|Ga0066678_10466670	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	839	Open in IMG/M
3300005406\|Ga0070703_10192414	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	795	Open in IMG/M
3300005406\|Ga0070703_10272716	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	695	Open in IMG/M
3300005440\|Ga0070705_100047113	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2490	Open in IMG/M
3300005440\|Ga0070705_100059045	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2270	Open in IMG/M
3300005444\|Ga0070694_100072206	All Organisms → cellular organisms → Bacteria	2380	Open in IMG/M
3300005444\|Ga0070694_101228000	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	629	Open in IMG/M
3300005445\|Ga0070708_100083412	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2897	Open in IMG/M
3300005445\|Ga0070708_100100036	All Organisms → cellular organisms → Bacteria	2653	Open in IMG/M
3300005445\|Ga0070708_100101521	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	2635	Open in IMG/M
3300005445\|Ga0070708_100119980	All Organisms → cellular organisms → Bacteria → Proteobacteria	2425	Open in IMG/M
3300005447\|Ga0066689_10598792	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	695	Open in IMG/M
3300005467\|Ga0070706_100158029	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2116	Open in IMG/M
3300005467\|Ga0070706_100188187	Not Available	1929	Open in IMG/M
3300005467\|Ga0070706_100369405	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1336	Open in IMG/M
3300005467\|Ga0070706_100803566	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	871	Open in IMG/M
3300005467\|Ga0070706_101801315	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	556	Open in IMG/M
3300005518\|Ga0070699_100111301	All Organisms → cellular organisms → Bacteria	2404	Open in IMG/M
3300005518\|Ga0070699_100188527	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1831	Open in IMG/M
3300005518\|Ga0070699_100211986	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1724	Open in IMG/M
3300005518\|Ga0070699_102080733	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	519	Open in IMG/M
3300005536\|Ga0070697_100244666	All Organisms → cellular organisms → Bacteria	1532	Open in IMG/M
3300005536\|Ga0070697_100515362	All Organisms → cellular organisms → Bacteria	1047	Open in IMG/M
3300005536\|Ga0070697_100657009	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	923	Open in IMG/M
3300005545\|Ga0070695_101715854	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	526	Open in IMG/M
3300005549\|Ga0070704_101971549	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	542	Open in IMG/M
3300005552\|Ga0066701_10045251	All Organisms → cellular organisms → Bacteria	2386	Open in IMG/M
3300005553\|Ga0066695_10491162	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	755	Open in IMG/M
3300005554\|Ga0066661_10112024	All Organisms → cellular organisms → Bacteria	1642	Open in IMG/M
3300005557\|Ga0066704_10010563	All Organisms → cellular organisms → Bacteria	5085	Open in IMG/M
3300005569\|Ga0066705_10593563	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	680	Open in IMG/M
3300005586\|Ga0066691_10474198	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	748	Open in IMG/M
3300005598\|Ga0066706_10045438	All Organisms → cellular organisms → Bacteria	2932	Open in IMG/M
3300005719\|Ga0068861_100961418	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	813	Open in IMG/M
3300006049\|Ga0075417_10066298	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1590	Open in IMG/M
3300006049\|Ga0075417_10087547	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1399	Open in IMG/M
3300006049\|Ga0075417_10299585	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	780	Open in IMG/M
3300006791\|Ga0066653_10772506	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	504	Open in IMG/M
3300006796\|Ga0066665_10184185	All Organisms → cellular organisms → Bacteria	1610	Open in IMG/M
3300006797\|Ga0066659_11042157	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	683	Open in IMG/M
3300006804\|Ga0079221_11809866	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	500	Open in IMG/M
3300006844\|Ga0075428_100089994	All Organisms → cellular organisms → Bacteria	3347	Open in IMG/M
3300006844\|Ga0075428_100119798	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2865	Open in IMG/M
3300006845\|Ga0075421_102138066	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	592	Open in IMG/M
3300006846\|Ga0075430_100177315	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1773	Open in IMG/M
3300006852\|Ga0075433_10129856	All Organisms → cellular organisms → Bacteria	2238	Open in IMG/M
3300006854\|Ga0075425_100791972	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1086	Open in IMG/M
3300006854\|Ga0075425_101001190	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	953	Open in IMG/M
3300006854\|Ga0075425_102296793	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	600	Open in IMG/M
3300006871\|Ga0075434_100683871	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1044	Open in IMG/M
3300006871\|Ga0075434_100945175	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	876	Open in IMG/M
3300006871\|Ga0075434_102648070	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	502	Open in IMG/M
3300006880\|Ga0075429_100062395	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	3247	Open in IMG/M
3300006904\|Ga0075424_102099279	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	596	Open in IMG/M
3300006914\|Ga0075436_100183945	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1477	Open in IMG/M
3300006914\|Ga0075436_100337254	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1085	Open in IMG/M
3300006954\|Ga0079219_10761292	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	751	Open in IMG/M
3300007076\|Ga0075435_101450757	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	602	Open in IMG/M
3300007255\|Ga0099791_10077049	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1517	Open in IMG/M
3300007265\|Ga0099794_10060284	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1843	Open in IMG/M
3300009012\|Ga0066710_100113609	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	3665	Open in IMG/M
3300009012\|Ga0066710_102886658	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	675	Open in IMG/M
3300009147\|Ga0114129_13051952	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	549	Open in IMG/M
3300009553\|Ga0105249_13138483	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	531	Open in IMG/M
3300012096\|Ga0137389_10563100	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	979	Open in IMG/M
3300012203\|Ga0137399_10226304	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → unclassified Alcaligenaceae → Alcaligenaceae bacterium	1527	Open in IMG/M
3300012203\|Ga0137399_10823100	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	782	Open in IMG/M
3300012203\|Ga0137399_11591239	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	541	Open in IMG/M
3300012205\|Ga0137362_10579466	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	968	Open in IMG/M
3300012208\|Ga0137376_10325984	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1333	Open in IMG/M
3300012582\|Ga0137358_10005076	All Organisms → cellular organisms → Bacteria	7885	Open in IMG/M
3300012582\|Ga0137358_10111911	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1852	Open in IMG/M
3300012685\|Ga0137397_10038363	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	3427	Open in IMG/M
3300012922\|Ga0137394_10815333	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	782	Open in IMG/M
3300012923\|Ga0137359_10671994	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	904	Open in IMG/M
3300012925\|Ga0137419_10027244	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	3446	Open in IMG/M
3300012925\|Ga0137419_10997532	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	694	Open in IMG/M
3300012927\|Ga0137416_11838099	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	554	Open in IMG/M
3300012927\|Ga0137416_12110736	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	518	Open in IMG/M
3300012944\|Ga0137410_10036221	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	3468	Open in IMG/M
3300015372\|Ga0132256_101980348	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	689	Open in IMG/M
3300015373\|Ga0132257_103580203	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	565	Open in IMG/M
3300015374\|Ga0132255_103978830	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	627	Open in IMG/M
3300018431\|Ga0066655_11138433	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	548	Open in IMG/M
3300018468\|Ga0066662_10832457	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	899	Open in IMG/M
3300018468\|Ga0066662_11471564	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	708	Open in IMG/M
3300020170\|Ga0179594_10365715	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	547	Open in IMG/M
3300025885\|Ga0207653_10032022	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1700	Open in IMG/M
3300025910\|Ga0207684_10011314	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	7812	Open in IMG/M
3300025910\|Ga0207684_10012507	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	7379	Open in IMG/M
3300025910\|Ga0207684_10021108	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	5561	Open in IMG/M
3300025910\|Ga0207684_10028221	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	4780	Open in IMG/M
3300025910\|Ga0207684_10033819	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	4348	Open in IMG/M
3300025910\|Ga0207684_10057495	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	3300	Open in IMG/M
3300025910\|Ga0207684_10317765	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1342	Open in IMG/M
3300025910\|Ga0207684_10968925	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	713	Open in IMG/M
3300025910\|Ga0207684_11151324	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	644	Open in IMG/M
3300025922\|Ga0207646_10025600	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	5397	Open in IMG/M
3300026301\|Ga0209238_1267793	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	512	Open in IMG/M
3300026315\|Ga0209686_1184938	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	575	Open in IMG/M
3300026318\|Ga0209471_1012862	All Organisms → cellular organisms → Bacteria	4338	Open in IMG/M
3300026318\|Ga0209471_1018621	All Organisms → cellular organisms → Bacteria → Proteobacteria	3524	Open in IMG/M
3300026318\|Ga0209471_1135065	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1036	Open in IMG/M
3300026542\|Ga0209805_1261249	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	672	Open in IMG/M
3300026548\|Ga0209161_10331696	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	696	Open in IMG/M
3300026557\|Ga0179587_10054170	All Organisms → cellular organisms → Bacteria	2317	Open in IMG/M
3300027643\|Ga0209076_1104292	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	804	Open in IMG/M
3300027748\|Ga0209689_1035163	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	2938	Open in IMG/M
3300027873\|Ga0209814_10178708	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	914	Open in IMG/M
3300027873\|Ga0209814_10276636	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	729	Open in IMG/M
3300027873\|Ga0209814_10313726	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	683	Open in IMG/M
3300027880\|Ga0209481_10117897	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1293	Open in IMG/M
3300027880\|Ga0209481_10118773	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1288	Open in IMG/M
3300027880\|Ga0209481_10326464	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	781	Open in IMG/M
3300027909\|Ga0209382_10045708	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	5230	Open in IMG/M
3300028536\|Ga0137415_10032052	All Organisms → cellular organisms → Bacteria	5171	Open in IMG/M
3300028536\|Ga0137415_10356124	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1267	Open in IMG/M
3300031716\|Ga0310813_12293818	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	512	Open in IMG/M
3300031720\|Ga0307469_10696503	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	921	Open in IMG/M
3300031820\|Ga0307473_11500927	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	511	Open in IMG/M
3300032180\|Ga0307471_100033890	All Organisms → cellular organisms → Bacteria	3983	Open in IMG/M
3300032180\|Ga0307471_100216376	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1934	Open in IMG/M
3300032180\|Ga0307471_100270265	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1767	Open in IMG/M
3300032180\|Ga0307471_100683074	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1190	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	75.57%
Host-Associated	Host-Associated	24.43%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	75.57%
Plants	Host-Associated → Plants	24.43%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	75.57%
Rhizosphere	Host-Associated → Plants → Rhizosphere	22.14%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.29%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	47.33%
Loam	Environmental → Terrestrial → Soil → Loam	28.24%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	21.37%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.53%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.76%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.76%

Habitat	Taxonomy	Distribution
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	26.72%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	22.90%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	21.37%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	18.32%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	4.58%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.53%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.53%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.53%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.76%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.76%

Habitat	Taxonomy	Distribution
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	26.72%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	20.61%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	18.32%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	17.56%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	4.58%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.58%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.53%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.53%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.53%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.76%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.76%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.76%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.76%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005406	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300020170	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300025885	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026315	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126 (SPAdes)	Environmental	Open in IMG/M
3300026318	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128 (SPAdes)	Environmental	Open in IMG/M
3300026542	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148 (SPAdes)	Environmental	Open in IMG/M
3300026548	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027643	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3 (SPAdes)	Environmental	Open in IMG/M
3300027748	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027880	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0066677_101258951	3300005171	Soil	MMTRRTPLLFEEATNADGVWTLVVRSSNGVVGHIFRAVGEYGYFVGRFNAFTATFRDPSLQRLKKRIVANRR*
Ga0066679_104273903	3300005176	Soil	PLLFEEATNADGVWTLVVRSSHGVVGHIFRAVGEYGYFVGRFNAFTATFRDPSLQRLKKRIVANRR*
Ga0066679_109100261	3300005176	Soil	MMMASAPLRFEEATDADGVWTLVVRSSDGVVGHIFRAVGEYGYFAGRFNAFAATFRDPSLERLKKRIVASRR*
Ga0066679_109125061	3300005176	Soil	MMTGSAPLLFEEATNADGVWTLVVRSSDGVVGHIFRAVGEYGYFAGRFNAFTATFRDPSLERLKKRIVANRR*
Ga0066690_101601772	3300005177	Soil	MMTGSAPLLFEEATNADGVWTLVVRSSDGVVGHIFRAVGEYGYFAGRFNAFTATFRDPSLERLKKRIVVASRR*
Ga0066688_102108232	3300005178	Soil	MMMRRAPLLFEEATNADGVWTLVVRSSDGVVGHIFRAVGEYGYFVGRFNAFTATFRDPSLQRLKKRIVANRR*
Ga0066678_101149851	3300005181	Soil	MMMASAPLLFEEATDAAGVWTLVVRSRDGVVGHIFRAVGEYGYFAGRFNAFTATFRDRSLERLKKRIVASRR*
Ga0066678_104666701	3300005181	Soil	MMMRRAPLLFEEATNADGVWTLVVRSSHGVVGHIFRAVGEYGYFVGRFNAFTATFRDPSLQRLKKRIVANRR*
Ga0070703_101924141	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	MMMRSAPLLFEEVTDADGVWRLVVRASHGVVGHIFRVGGEYGYFAGRFNAFTAKFRDPSLDRLKRRIVASRR*
Ga0070703_102727161	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	MMIGSAPLFFEEATNADGVWRLVVRSSHGVVGHIFRVAGEYGYFAGRFNALTATFRDANLERLKKRIVAGRQ*
Ga0070705_1000471134	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MMMRSAPLLFEEATNADGVWTLVVQSSDGVVGHIFRTVGEYGYFVGRFNAFTATFKDPNLERLKKRIVASRR*
Ga0070705_1000590452	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MMIGSAPLLFEEATNADGVWRLVVRSSDGVVGHIFRTVGEYGYFAGRFNAFTATFKDPNLERLKKRIVASRR*
Ga0070694_1000722064	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MMIGSAPLLFEEATNADGVWRLVVRSSDGVVGHIFRTVGEYGYFAGRFNALSPTFRDPSLMSLVE*
Ga0070694_1012280001	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	LGSAPLLFEEATNADGIWRLVVRSSDGVVGHIFRIVGEYGYFAIDASTVTFRDPNLERLKKRIVASRR*
Ga0070708_1000834123	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MMIGSAPVLFEEATNADGVWRLVVRSSDGVVGHIFRIVGEYGYFAIDASTVTFRDPNLERLKKRIVASRR*
Ga0070708_1001000366	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MMIGSAPLLFEEATNADGVWRLVVRSSDGVVGHIFRTVGEYGYFVGRFNAFTATFRDANLERLKERIVTSKR*
Ga0070708_1001015215	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MMTRSAPLLFEEATNAPGVWRLVVRSSDGVVGHIFRTVGEYGYFAGRFNAFTATFKDPNLERLKKRIVASRR*
Ga0070708_1001199803	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MMVGRAPLLFEEATNAPGVWRLVVRSSDGVVGHIFRTAGEYGYFAGRFNAFTPTFRDPNLKRLKKRIVASRR*
Ga0066689_105987921	3300005447	Soil	MMMASAPLLFEEATDAAGVWTLVVRSRDGVVGHIFRAVGEYGYFAGRFNAFTATFRDPSLERLKKRIVANRR*
Ga0070706_1001580292	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MMVGRAPLLFEEATHADGVWRLVVRSSRGVVGHIFRVGGEYGYFAGRFNAFTATFRDANLERLKKRIVASRR*
Ga0070706_1001881872	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MMMRSAPLLFEEATNADGVWRLVVRSSRGVVGHIFRVGGEYGYFAGRFNALSPTFRDPSLEHLKKRIVASRR*
Ga0070706_1003694053	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MIMGSAPLLFEEATDADGVWRLVVRSRRGVVGHIFRVGGEYGYFAGRFNAFTPTFRDPNLEHLKKRIVASRR*
Ga0070706_1008035661	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MMIGSIPLLFEEATNADGVWRLVVRSSDGVVGHIFRIVGEYGYFAIDASTVTFRDPNLEHLKKRIVASRR*
Ga0070706_1018013152	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MMMRSSPLLFEEATNAPGVWRLVVRSSDGVVGHIFRTVGEYGYFAGRFNAFTPTFRDPNLERLKKRIVASRR*
Ga0070699_1001113012	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MVGRAPLLFKEATNAPGVWRLVVRSSDGVVGHIFRSVGEYGYFAGRFNAFTPTFRDPNLNRLKKRIVASRR*
Ga0070699_1001885271	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MMMRSAPLQFEEATNAPGVWRLVVRSSDGVVGHIFRTVGEYGYFAGRFNAFTPTFRDPNLKRLKKRIVASER*
Ga0070699_1002119862	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MMMRSAPLLFEEATNADGVWTLVVQSSDGVVGHIFRTVGEYGYFVGRFNAFTATFKDPNLERLKKRIIASRR*
Ga0070699_1020807331	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	FEEATNAPGVWRLVVRSSDGVVGHIFRTAGEYGYFAGRFNAFTPTFRDPNLKRLKKRIVASRR*
Ga0070697_1002446663	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MTETPILFEEATTADGVWRLAVRSSDGIVGHIFRIDGGEYAYFSGRFNAFTAAFRDAGLERLKKRIAESRR*
Ga0070697_1005153621	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	EEATNAPGVWRLVVRSSDGVVGHIFRTAGEYGYFAGRFNAFTPTFRDPNLKRLKKRIVASRR*
Ga0070697_1006570091	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MMIGSAPVLFEEATNADGVWRLVVRSSDGVVGHIFRIVGEYGYFAIDASTVTFRDPNLERLKKRIAAGRR*
Ga0070695_1017158541	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	MMIGSAPLRFEEATNAPGVWRLVVRSSDGVVGHIFRTVGEYGYFAGRFNAFTATFKDPNLERLKKRIVASRR*
Ga0070704_1019715491	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	MMIGSAPVLFEEATNADGVWRLVVRSSDGVVGHIFRTVGEYGYFAGRFNAFTPTFRDPNLERLKKQIVAS
Ga0066701_100452514	3300005552	Soil	MMMASAPLLFEEATDAAGVWTLVVRSSDGVIGHIFRAVGEYGYFAGRFNAFTATFRDPSLERLKKRIVASRR*
Ga0066695_104911621	3300005553	Soil	MRRAPLLFEEATNADGVWTLVVRSSHGVVGHIFRAVGEYGYFVGRFNAFTATFRDPSLQRLKKRIVANRR*
Ga0066661_101120243	3300005554	Soil	MMTGNAALCFDEATNADGVWTVIVRSSHGVIGHIFRAVGEYGYFAGRFNAFTVTISDPSLDRLKARIIASRR*
Ga0066704_100105635	3300005557	Soil	MMTGNAALCFDEATNADGVWTVIVRSSHGVIGHIFRAVGEYGYFAGRFNAFTVTISDPSLDRLKARIVASRR*
Ga0066705_105935631	3300005569	Soil	EEATNADGVWTLVVRSSHGVVGHIFRAVGEYGYFVGRFNAFTATFRDPSLQRLKKRIVANRR*
Ga0066691_104741982	3300005586	Soil	MTGNAALCFDEATNADGVWTVIVRSSHGVIGHIFRAVGEYGYFAGRFNAFTVTISDPSLDRLKARIVASRR*
Ga0066706_100454385	3300005598	Soil	MMTRRTPLLFEEATNADGVWTLVVRSSHGVVGHIFRAVGEYGYFVGRFNAFTATFRDPSLQRLKKRIVANRR*
Ga0068861_1009614182	3300005719	Switchgrass Rhizosphere	FEEATNADGVWRLVVRSSHGVVGHIFRVAGEYGYFAGRFNALTATFRDANLERLKKRIVAGRQ*
Ga0075417_100662983	3300006049	Populus Rhizosphere	MVRAPLLFEEATNADGVWRLVVRSSDGVVGHIFRTVDEYGYFAGRFNALTITFRDSNLERLKKRIVARRRMDARRRDGLVAKRRAR*
Ga0075417_100875472	3300006049	Populus Rhizosphere	MMMRSAPLLFEEAANADGVWRLVVRSSDGVVGHIFRSVAEYGYFAGRFNAFTATFRDPNLKRLRKRIVASRR*
Ga0075417_102995851	3300006049	Populus Rhizosphere	MMIGSAPLLFEEATNADGVWRLVVRSSDGVVGHIFRIVGEYGYFAIDASTVTFRDPNLERLKK
Ga0066653_107725061	3300006791	Soil	MMTRRSPLLFEEATNADGVWTLVVRSSHGVVGHIFRAVGEYGYFVGRFNAFTATFRDPSLQRLKKRIVANRR*
Ga0066665_101841853	3300006796	Soil	MMMRRAPLLFEEATNADGVWTLVVRSSHGVVGHIFCAVGEYGYFVGRFNAFTATFRDPSLQRLKKRIVANRR*
Ga0066659_110421571	3300006797	Soil	MMMRRAPLLFEEATNADGVWTLVVRSSNGVVGHIFRAVGEYGYFVGRFNAFTATFRDPS
Ga0079221_118098662	3300006804	Agricultural Soil	MMMRSAPLLFEEATNADGVWRLVVRSSDGVVGHIFRSVGEYGYFAGRFNAFTATFRDPNLKRLRKRIVASRR*
Ga0075428_1000899942	3300006844	Populus Rhizosphere	MMIGSAPLLFEEATNADGVWRLVVRSSDGVVGHIFRIVGEYGYFAIDAFTVTFRDPNLERLKNRIVASRR*
Ga0075428_1001197984	3300006844	Populus Rhizosphere	MMMRSAPLLFEEVTNAPGVWRLVVRSSDGVVGHIFRTVGEYGYFAGRFNAFTPTFRDPNLKRLKKRIVAGRR*
Ga0075421_1021380662	3300006845	Populus Rhizosphere	MLMRSAPLLFEEATNADGVWRLVVRSRDGVVGHIFRIVGEYGYFAGRFNAFTATFRDANLERLKKRIVASKR*
Ga0075430_1001773154	3300006846	Populus Rhizosphere	MMMRSAPLLFEEVTKAPGVWRLVVRSSDGVVGHIFRTVGEYGYFAGRFNAFTPTFRDPNLKRLKKRIVAGRR*
Ga0075433_101298562	3300006852	Populus Rhizosphere	MMMRSAPLLFEKGTNADGVWRLVVRSSDGVVGHIFRAVGEYGHFAGRFNAFTETFTDPSLERLKKRIVASRR*
Ga0075425_1007919721	3300006854	Populus Rhizosphere	MMRSAPLLFEDATNADGVWRLVVRSSDGVVGHIFRIVGEYGYFAIDASTVTFRDPNLERLKKQIVASRR*
Ga0075425_1010011902	3300006854	Populus Rhizosphere	MMIGSAPVLFEEATNADGVWRLVVRSSDGVVGHIFRIVGEYGYFAIDAFTVTFRDPNLERLKKQIVASRR*
Ga0075425_1022967932	3300006854	Populus Rhizosphere	MMMRSAPLLFEEGTNADGVWRLVVRSSDGVVGHIFRAVGEYGHFAGRFNAFTETFTDPSLERLKKRIVASRR*
Ga0075434_1006838713	3300006871	Populus Rhizosphere	MMMRSAPLLFEEATNAPGVWRLVVRSSDGVVGHIFRTVGEYGYFAGRFNAFTPTFRDPNLKRLKKRIVAGRR*
Ga0075434_1009451752	3300006871	Populus Rhizosphere	MMRSAPLLFEEATNADGVWRLVVRSSDGVVGHIFRSVGEYGYFAGRFNAFTATFRDPNLKRLRKRIVASRR*
Ga0075434_1026480702	3300006871	Populus Rhizosphere	MMIGSAPLLFEEATNADGVWRLVVRSSDGVVGHIFRIVGEYGYFAIDAFTVTFRDPNLERLKNQIVASRR*
Ga0075429_1000623951	3300006880	Populus Rhizosphere	VWRLVVRSSDGVVGHIFRTVDEYGYFAGRFNALTITFRDSNLERLKKRIVARRRMDARRRDGLVAKRRAR*
Ga0075424_1020992792	3300006904	Populus Rhizosphere	MTVRAPLLFEEATNADGVWRLVVRSSDGVVGHIFRIVGEYGYFAIDAFTVTFRDPNLERLKKQIVASRR*
Ga0075436_1001839453	3300006914	Populus Rhizosphere	MRSAPLLFEEAANADGVWRLVVRSSDGVVGHIFRSVAEYGYFAGRFNAFTATFRDPNLKRLRKRIVASRR*
Ga0075436_1003372541	3300006914	Populus Rhizosphere	MMMRSAPLLFEKGTNADGVWRLVVRSSDGVVGHIFRTVGEYGYFAGRFNAFTPTFRDPNLKRLKKRIVASRR*
Ga0079219_107612921	3300006954	Agricultural Soil	EEATNADGVWRLVVRSSDGVVGHIFRIVGEYGYFAIDAFTVTFRDPNLERLKKQIVASRR
Ga0075435_1014507571	3300007076	Populus Rhizosphere	MMMRSAPLLFEKGTNADGVWRLVVRSSDGVVGHIFRAVGEYGHFAGRFNAFTETFTDPSLERLKKRIVASSR*
Ga0099791_100770491	3300007255	Vadose Zone Soil	MPGSAPLRFEEATNADGVWTLVVRSSDGVVGHIFRAVGEYAYFAGHFNAFTVAFRDASLEHLKKRIVATTR*
Ga0099794_100602842	3300007265	Vadose Zone Soil	MPGSAPLRFEEATNADGVWTLVVRSSDGVVGHIFRAVGEYAYFAGHFNAFTVALRDASLEHLKKRIVATTR*
Ga0066710_1001136092	3300009012	Grasslands Soil	MMTGNAALCFDEATNADGVWTVIVRSSHGVIGHIFRAVGEYGYFAGRFNAFTVTISDPSLDRLKARIVASRR
Ga0066710_1028866582	3300009012	Grasslands Soil	MMMASAPLLFEEATDAAGVWTLVVRSRDGVVGHIFRAVGEYGYFAGRFNAFTATFRDPSLKRLKKRIVASRR
Ga0114129_130519521	3300009147	Populus Rhizosphere	MMRSAPLLFEEATNADGVWRLVVRSSDGVVGHIFRIVGEYGYFAIDASTVTFRDPNLERLKKQIVASR
Ga0105249_131384831	3300009553	Switchgrass Rhizosphere	MIGSAPLFFEEATNADGVWRLVVRSSHGVVGHIFRVAGEYGYFAGRFNALTATFRDANLERLKKRIVAGRQ*
Ga0137389_105631002	3300012096	Vadose Zone Soil	MMMRSTPLLFEGAANADGVWTLVVRSSDGVVGHIFRAVGEYGRFNAFTATFRDPSLEWLKKRIVASRR*
Ga0137399_102263041	3300012203	Vadose Zone Soil	MMMASAPLLFEEATNAGGVWTVVVRSSDGVVGRIFRAVGEYGYFAGRFNAFTATFRDPSLEWLKKRIVASRR*
Ga0137399_108231001	3300012203	Vadose Zone Soil	SPRNLPMMMASAPLLFEEATDADGVWTLVVRSSDGVVGHIFRAVGEYGYFAGRFNALTATFRDPSLERLKKRIIASRR*
Ga0137399_115912392	3300012203	Vadose Zone Soil	MMMASAPLLFEEATDADKVWTLVVRSSDGVVGHIFRAGGEYGYFAGRFNAFTATFRDPSLERLKKRIVASRR*
Ga0137362_105794663	3300012205	Vadose Zone Soil	MPGSAPLRFEEATNADGVWTLVVRSSDGVVGHIFRAVGEYAYFAGHFNAFTVAFRDASLEHLKKRIVATRR*
Ga0137376_103259843	3300012208	Vadose Zone Soil	MMMRRAPLLFEEATNADGVWTLVVRSSQGVVGHIFRAVGEYGYFVGRFNAFTATFRDPSLQRLKKRIVANRR*
Ga0137358_100050763	3300012582	Vadose Zone Soil	MMTGDAALCFDEATNADGVWTVIVRSSHGVIGHIFRAVGEYGYFAGRFNGFTVTISDPSLDRLKARIIASRR*
Ga0137358_101119112	3300012582	Vadose Zone Soil	MMMASAPLRFEEATDADGVWTLVVRSSDGVVGHIFRAVGEYGYFAGRFNALTATFRDPSLERLKKRIIASRR*
Ga0137397_100383633	3300012685	Vadose Zone Soil	MMTGDAALCFDEATNADGVWTVIVRSSHGVIGHIFRAVGEYGYFAGRFNAFTVTISDPSLDRLKTRIIASRR*
Ga0137394_108153332	3300012922	Vadose Zone Soil	MMMASAPLRFEEATDAAGVWTLVVRSRDGVVGHIFRAVGEYGYFAGRFNAFTATLRDPSLERLKKRIVASRR*
Ga0137359_106719942	3300012923	Vadose Zone Soil	MMMASAPLRFEEATDADGVWTLVVRSSDGVVGHIFRAVGEYGYFAGRFNALTATFRDPSLERLKKRIVASRR*
Ga0137419_100272443	3300012925	Vadose Zone Soil	MMTGDAALCFDEATNADGVWTVIVRSSHGVIGHIFRAVGEYGYFSGRFNAFTVTISDPSLDRLKARIIASRR*
Ga0137419_109975322	3300012925	Vadose Zone Soil	MMTGSAPLLFEEATNADGVWTLVVRSSDGVVGHIFRAVGEYGYFAGRFNAFTATFRDPSLERLKKRIVASRR*
Ga0137416_118380991	3300012927	Vadose Zone Soil	MTMRRAPLLFEEATNADGVWTLVVRSSNGVVGHIFRAVGEYGYFVGRFNAFTATFRNPSLQRLKKRIVANR*
Ga0137416_121107361	3300012927	Vadose Zone Soil	MMMANAPLLFEEATNAGGVWMVVVRSSDGVVGHIFRAVGEYGYFAGRFNAFTATFRDPSLERLKKRIVANRR*
Ga0137410_100362216	3300012944	Vadose Zone Soil	MMTGDAALCFDEATNADGVWTVIVRSSHGVIGHIFRAVGEYGYFAGRFNAFTVTISDPSLDRLKARIIASRR*
Ga0132256_1019803481	3300015372	Arabidopsis Rhizosphere	MMMRSAPLLFEEVTNAPGVWRLVVRSSEGVVGHIFRTVGEYGYFPGRFNAFTPTFRDPNLKRLKKRIVASR
Ga0132257_1035802031	3300015373	Arabidopsis Rhizosphere	MLMRSAPLLFEEATNADGVWRLVVRSSDGVVGHIFRTVGEYGYFAGRFNAFTATFRDANLERLKKQIVASRR*
Ga0132255_1039788301	3300015374	Arabidopsis Rhizosphere	MMMRSAPFLFEEDTNADGVWRLVVRSSDGVVGHIFRTVGEYGYLAGRFNAFTATFRDANLERLKKRIVASRR*
Ga0066655_111384331	3300018431	Grasslands Soil	MMMRRAPLLFEEATNADGVWTLVVRSSHGVVGHIFRAVGEYGYFVGRFNAFTATFRDPSLQRLKKRIVANRR
Ga0066662_108324573	3300018468	Grasslands Soil	VRSDRAIRQGEDEDDEATNADGVWTVIVRSSHGVIGHIFRAVGEYGYFAGRFNAFTVTISDPSLDRLKARIVASRR
Ga0066662_114715642	3300018468	Grasslands Soil	MMTRRTPLLFEEATNADGVWTLVVRSSHGVVGHIFRAVGEYGYFVGRFNAFTATFRDPSLQRLKKRIVANRR
Ga0179594_103657151	3300020170	Vadose Zone Soil	MMMRRAPLLFEEATNADGVWTLVVRSSHGVVGQIFRAVGEYGYFVGRFNAFTATFRDPSLQRLKKRIVANRR
Ga0207653_100320223	3300025885	Corn, Switchgrass And Miscanthus Rhizosphere	MMMRSAPLLFEEVTDADGVWRLVVRASHGVVGHIFRVGGEYGYFAGRFNALTATFRDANLERLKKRIVAGRQ
Ga0207684_100113149	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	VLFEEATNADGVWRLVVRSSDGVVGHIFRIVGEYGYFAIDASTVTFRDPNLERLKKRIVASRR
Ga0207684_100125073	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MMTRSAPLLFEEATNAPGVWRLVVRSSDGVVGHIFRTVGEYGYFAGRFNAFTATFKDPNLERLKKRIVASRR
Ga0207684_100211087	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MMIGSAPLLFEEATNADGVWRLVVRSSDGVVGHIFRTVGEYGYFVGRFNAFTATFRDANLERLKERIVTSKR
Ga0207684_100282219	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MMVGRAPLLFEEATHADGVWRLVVRSSRGVVGHIFRVGGEYGYFAGRFNAFTATFRDANLERLKKRIVASRR
Ga0207684_100338194	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MMVGRAPLLFEEATNAPGVWRLVVRSSDGVVGHIFRTAGEYGYFAGRFNAFTPTFRDPNLKRLKKRIVASRR
Ga0207684_100574956	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MMMRSAPLLFEEATNADGVWRLVVRSSRGVVGHIFRVGGEYGYFAGRFNALSPTFRDPSLEHLKKRIVASRR
Ga0207684_103177652	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MIMGSAPLLFEEATDADGVWRLVVRSRRGVVGHIFRVGGEYGYFAGRFNAFTPTFRDPNLEHLKKRIVASRR
Ga0207684_109689252	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MMIGSIPLLFEEATNADGVWRLVVRSSDGVVGHIFRIVGEYGYFAIDASTVTFRDPNLEHLKKRIVASRR
Ga0207684_111513241	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	LPMMKGSAPLRFEEATNADGVWTLVVRSSDGVVGHIFRAIGEYAYFAGHFNAFTVTFRDSSLEHLKKRIVAAKR
Ga0207646_100256006	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MMIGSAPVLFEEATNADGVWRLVVRSSDGVVGHIFRIVGEYGYFAIDASTVTFRDPNLERLKKRIVASRR
Ga0209238_12677931	3300026301	Grasslands Soil	MMTRRTPLLFEEATNADGVWTLVVRSSQGVVGHIFRAVGEYGYFVGRFNAFTATLRDPSLQRLKKRIVANRR
Ga0209686_11849381	3300026315	Soil	MMTRRTPLLFEEATNADGVWTLVVRSSNGVVGHIFRAVGEYGYFVGRFNAFTATFRDPSLQRLKKRIVA
Ga0209471_10128623	3300026318	Soil	MMTGSAPLLFEEATNADGVWTLVVRSSDGVVGHIFRAVGEYGYFAGRFNAFTATFRDPSLERLKKRIVANRR
Ga0209471_10186213	3300026318	Soil	MMRRTPLLFEEATNADGVWTLVVRSSHGVVGHIFRAVGEYGYFVGRFNAFTATFRDPSLQRLKKRIVANRR
Ga0209471_11350652	3300026318	Soil	MMTRRTPLLFEEATNADGVWTLVVRSSNGVVGHIFRAVGEYGYFVGRFNAFTATFRDPSLQRLKKRIVANRRSFRR
Ga0209805_12612491	3300026542	Soil	TDADGVWTLVVRSSDGVVGHIFRAVGEYGYFAGRFNAFAATFRDPSLERLKKRIVASRR
Ga0209161_103316961	3300026548	Soil	MMTGSAPLLFEEATNADGVWTLVVRSSDGVVGHIFRAVGEYGYFAGRFNAFTATFRDPS
Ga0179587_100541706	3300026557	Vadose Zone Soil	MPGSAPLRFEEATNADGVWTLVVRSSDGVVGHIFRAVGEYAYFAGHFNAFTVAFKDASLEHLKKRIVATTR
Ga0209076_11042922	3300027643	Vadose Zone Soil	MPGSAPLRFEEATNADGVWTLVVRSSDGVVGHIFRAVGEYAYFAGHFNAFTVAFRDASLEHLKKRIVATTR
Ga0209689_10351634	3300027748	Soil	TNADGVWTVIVRSSHGVIGHIFRAVGEYGYFAGRFNAFTVTISDPSLDRLKARIIASRR
Ga0209814_101787081	3300027873	Populus Rhizosphere	MMIGSAPLLFEEATNADGVWRLVVRSSDGVVGHIFRIVGEYGYFAIDAFTVTFRDPNL
Ga0209814_102766361	3300027873	Populus Rhizosphere	MMMRSAPLLFEEAANADGVWRLVVRSSDGVVGHIFRSVAEYGYFAGRFNAFTATFRDPNLKRLRKRIVASRR
Ga0209814_103137261	3300027873	Populus Rhizosphere	MMMRSAPLLFEEVTNAPGVWRLVVRSSDGVVGHIFRSFGEYGYFAGRFNAFTATFRDPNLKRLRKRIVASRR
Ga0209481_101178972	3300027880	Populus Rhizosphere	MMIGSAPLLFEEATNADGVWRLVVRSSDGVVGHIFRIVGEYGYFAIDAFTVTFRDPNLERLKNRIVASRR
Ga0209481_101187732	3300027880	Populus Rhizosphere	MVRAPLLFEEATNADGVWRLVVRSSDGVVGHIFRTVDEYGYFAGRFNALTITFRDSNLERLKKRIVARRRMDARRRDGLVAKRRAR
Ga0209481_103264642	3300027880	Populus Rhizosphere	MMMRSAPLLFEEVTKAPGVWRLVVRSSDGVVGHIFRTVGEYGYFAGRFNAFTPTFRDPNLKRLKKRIVAGRR
Ga0209382_100457084	3300027909	Populus Rhizosphere	MMMRSAPLLFEEVTKAPGVWRLVVRSSDGVVGHIFRTVGEYGYFAGRFNAFTPTFRDPNLKSLKKRIVAGRR
Ga0137415_100320523	3300028536	Vadose Zone Soil	MPGSAPLRFEEATNADGVWTLVVRSSDGVVGHIFRAVGEYAYFAGHFNAFTVALRDASLEHLKKRIVATTR
Ga0137415_103561241	3300028536	Vadose Zone Soil	TSATGDPRANLPMMMASAPLRFEEATDADGVWTLVVRSSDGVVGHIFRAVGEYGYFAGRFNAFTATFRDPSLERLKKRIVANRR
Ga0310813_122938182	3300031716	Soil	SAPLLFEEATNAPGVWRLVVRSSDGVVGHIFRTVGEYGYFAGRFNAFTPTFRDPNLKRLKKRIVASRR
Ga0307469_106965032	3300031720	Hardwood Forest Soil	MIMGSAPLLFEEATNADGVWRLVVRSSDGVVGHIFRTVGEYGYFAGRFNAFTATFRDANLERLKERIVTSKR
Ga0307473_115009272	3300031820	Hardwood Forest Soil	MMGSAPLLFEEATNADGVWRLVVRSSDGVVGHIFRTVGEYGYFAGRFNAFTATFRDANLERLKERIVTSKR
Ga0307471_1000338901	3300032180	Hardwood Forest Soil	PLLFEEATNADGVWRLVVRSSDGVVGHIFRTVGEYGYFVGRFNAFTATFRDANLARLKERIVTSKR
Ga0307471_1002163763	3300032180	Hardwood Forest Soil	MMIGSAPLFFEEATNADGVWRLVVRSSHGVVGHIFRVAGEYGYFAGRFNALTATFRDANLERLKNRIVARRR
Ga0307471_1002702653	3300032180	Hardwood Forest Soil	MMMRSAPLLFEEVTDADGVWRLVVRARHGVVGHIFRVGGEYGYFAGRFNAFTAKFRDPSLDRLKRRIVASRR
Ga0307471_1006830742	3300032180	Hardwood Forest Soil	MMMRSAPLLFEEATNADGVWTLVVRSSDGVVGHIFRTVGEYGYFVGRFNAFTATFKDPNLEGLKKRIVASRR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F061724

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences