Metagenome Family F061629

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F061629
Family Type	Metagenome
Number of Sequences	131
Average Sequence Length	52 residues
Representative Sequence	PHVYRYYFERAPTVSSGGAAVSYALEEWCDAGDPVEKQSIVPPKQIIK
Number of Associated Samples	108
Number of Associated Scaffolds	131

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	2.31 %
% of genes near scaffold ends (potentially truncated)	95.42 %
% of genes from short scaffolds (< 2000 bps)	93.13 %
Associated GOLD sequencing projects	103
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.23

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (97.710 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil (13.741 % of family members)
Environment Ontology (ENVO)	Unclassified (26.718 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (56.489 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 23.68% Coil/Unstructured: 76.32%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.23
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.23
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 131 Family Scaffolds
PF00486	Trans_reg_C	3.82
PF07690	MFS_1	2.29
PF01261	AP_endonuc_2	1.53
PF03162	Y_phosphatase2	0.76
PF12006	DUF3500	0.76
PF12697	Abhydrolase_6	0.76
PF07676	PD40	0.76
PF00216	Bac_DNA_binding	0.76
PF14031	D-ser_dehydrat	0.76

COG ID	Name	Functional Category	% Frequency in 131 Family Scaffolds
COG0776	Bacterial nucleoid DNA-binding protein IHF-alpha	Replication, recombination and repair [L]	0.76
COG2365	Protein tyrosine/serine phosphatase Oca4	Signal transduction mechanisms [T]	0.76

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	97.71 %
Unclassified	root	N/A	2.29 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	97.71 %
Unclassified	root	N/A	2.29 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	97.71 %
Unclassified	root	N/A	2.29 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	61.83 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	25.95 %
Unclassified	root	N/A	2.29 %

Name	Rank	Taxonomy	Distribution
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	44.27 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	16.03 %
Blastocatellia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	10.69 %
Vicinamibacteria	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria	3.05 %
Unclassified	root	N/A	2.29 %

Name	Rank	Taxonomy	Distribution
unclassified Terriglobia	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia	42.75 %
unclassified Blastocatellia	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia	10.69 %
Vicinamibacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales	3.05 %
Unclassified	root	N/A	2.29 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.76 %

Name	Rank	Taxonomy	Distribution
Acidobacteriia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	42.75 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	10.69 %
Vicinamibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae	3.05 %
Unclassified	root	N/A	2.29 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.76 %

Name	Rank	Taxonomy	Distribution
Acidobacteriia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	42.75 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	10.69 %
Luteitalea	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea	3.05 %
Unclassified	root	N/A	2.29 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.76 %

Name	Rank	Taxonomy	Distribution
Acidobacteriia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	42.75 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	10.69 %
unclassified Luteitalea	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea	3.05 %
Unclassified	root	N/A	2.29 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.76 %

Name	Rank	Taxonomy	Distribution
Acidobacteriia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	42.75 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	10.69 %
Luteitalea sp.	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	3.05 %
Unclassified	root	N/A	2.29 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.76 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2189573001\|GZR05M101D9EZY	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	504	Open in IMG/M
2228664022\|INPgaii200_c0908431	All Organisms → cellular organisms → Bacteria → Proteobacteria	844	Open in IMG/M
3300000891\|JGI10214J12806_11084390	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1733	Open in IMG/M
3300000891\|JGI10214J12806_11420657	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	518	Open in IMG/M
3300001991\|JGI24743J22301_10043632	All Organisms → cellular organisms → Bacteria → Proteobacteria	904	Open in IMG/M
3300004114\|Ga0062593_102262899	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	610	Open in IMG/M
3300004153\|Ga0063455_100033133	All Organisms → cellular organisms → Bacteria	1580	Open in IMG/M
3300004157\|Ga0062590_100652020	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	937	Open in IMG/M
3300004479\|Ga0062595_100119703	All Organisms → cellular organisms → Bacteria	1453	Open in IMG/M
3300004480\|Ga0062592_101854061	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	591	Open in IMG/M
3300004643\|Ga0062591_101339303	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	706	Open in IMG/M
3300004643\|Ga0062591_101980529	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	600	Open in IMG/M
3300005093\|Ga0062594_100894746	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	837	Open in IMG/M
3300005293\|Ga0065715_10327345	All Organisms → cellular organisms → Bacteria	990	Open in IMG/M
3300005294\|Ga0065705_10525425	All Organisms → cellular organisms → Bacteria	758	Open in IMG/M
3300005294\|Ga0065705_11126756	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	517	Open in IMG/M
3300005295\|Ga0065707_10594582	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	694	Open in IMG/M
3300005332\|Ga0066388_104605113	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	702	Open in IMG/M
3300005333\|Ga0070677_10418436	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	710	Open in IMG/M
3300005334\|Ga0068869_100319253	All Organisms → cellular organisms → Bacteria	1259	Open in IMG/M
3300005340\|Ga0070689_100092147	All Organisms → cellular organisms → Bacteria	2390	Open in IMG/M
3300005340\|Ga0070689_101353441	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	642	Open in IMG/M
3300005347\|Ga0070668_101770309	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	568	Open in IMG/M
3300005355\|Ga0070671_100045960	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3630	Open in IMG/M
3300005438\|Ga0070701_10456508	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	821	Open in IMG/M
3300005441\|Ga0070700_102013731	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	501	Open in IMG/M
3300005457\|Ga0070662_101416007	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	599	Open in IMG/M
3300005467\|Ga0070706_101396569	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	641	Open in IMG/M
3300005547\|Ga0070693_100108034	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1706	Open in IMG/M
3300005549\|Ga0070704_101425228	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	636	Open in IMG/M
3300005564\|Ga0070664_101283795	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	691	Open in IMG/M
3300005577\|Ga0068857_102363092	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	522	Open in IMG/M
3300005616\|Ga0068852_101275840	All Organisms → cellular organisms → Bacteria	756	Open in IMG/M
3300005718\|Ga0068866_11021217	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	588	Open in IMG/M
3300005764\|Ga0066903_103595144	All Organisms → cellular organisms → Bacteria	835	Open in IMG/M
3300005843\|Ga0068860_102415045	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	546	Open in IMG/M
3300005937\|Ga0081455_11033606	Not Available	508	Open in IMG/M
3300005985\|Ga0081539_10462287	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	525	Open in IMG/M
3300006845\|Ga0075421_100003758	All Organisms → cellular organisms → Bacteria	18233	Open in IMG/M
3300006845\|Ga0075421_101409184	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	766	Open in IMG/M
3300006853\|Ga0075420_100023882	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5478	Open in IMG/M
3300006854\|Ga0075425_102603371	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	559	Open in IMG/M
3300006871\|Ga0075434_100127868	All Organisms → cellular organisms → Bacteria	2558	Open in IMG/M
3300006881\|Ga0068865_100305423	All Organisms → cellular organisms → Bacteria → Proteobacteria	1275	Open in IMG/M
3300006881\|Ga0068865_102137654	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	509	Open in IMG/M
3300006903\|Ga0075426_10836847	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	693	Open in IMG/M
3300009094\|Ga0111539_12242207	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	634	Open in IMG/M
3300009094\|Ga0111539_12382980	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	614	Open in IMG/M
3300009156\|Ga0111538_11486055	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	854	Open in IMG/M
3300009162\|Ga0075423_13073937	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	511	Open in IMG/M
3300009177\|Ga0105248_11444949	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	778	Open in IMG/M
3300010359\|Ga0126376_11454618	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	712	Open in IMG/M
3300010362\|Ga0126377_10029339	All Organisms → cellular organisms → Bacteria	4634	Open in IMG/M
3300010362\|Ga0126377_13567593	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	503	Open in IMG/M
3300010371\|Ga0134125_11523269	All Organisms → cellular organisms → Bacteria → Acidobacteria	728	Open in IMG/M
3300010397\|Ga0134124_11564407	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	689	Open in IMG/M
3300010399\|Ga0134127_11228420	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	817	Open in IMG/M
3300010403\|Ga0134123_12514965	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	581	Open in IMG/M
3300011119\|Ga0105246_10061535	All Organisms → cellular organisms → Bacteria → Acidobacteria	2613	Open in IMG/M
3300012212\|Ga0150985_100492328	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1032	Open in IMG/M
3300012212\|Ga0150985_116542115	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	806	Open in IMG/M
3300012469\|Ga0150984_102268951	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	842	Open in IMG/M
3300012469\|Ga0150984_103513240	All Organisms → cellular organisms → Bacteria → Proteobacteria	1003	Open in IMG/M
3300012469\|Ga0150984_111721318	All Organisms → cellular organisms → Bacteria → Proteobacteria	894	Open in IMG/M
3300012469\|Ga0150984_117555858	All Organisms → cellular organisms → Bacteria → Proteobacteria	858	Open in IMG/M
3300012469\|Ga0150984_119352917	All Organisms → cellular organisms → Bacteria → Acidobacteria	1128	Open in IMG/M
3300012893\|Ga0157284_10276569	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	540	Open in IMG/M
3300012898\|Ga0157293_10069074	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	837	Open in IMG/M
3300012948\|Ga0126375_11509258	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	575	Open in IMG/M
3300012951\|Ga0164300_10251680	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	897	Open in IMG/M
3300012955\|Ga0164298_10744379	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	694	Open in IMG/M
3300012985\|Ga0164308_10387358	All Organisms → cellular organisms → Bacteria → Acidobacteria	1139	Open in IMG/M
3300012985\|Ga0164308_11663561	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	591	Open in IMG/M
3300012989\|Ga0164305_11793572	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	554	Open in IMG/M
3300013297\|Ga0157378_11505623	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	717	Open in IMG/M
3300014326\|Ga0157380_10876852	All Organisms → cellular organisms → Bacteria	921	Open in IMG/M
3300014745\|Ga0157377_11207651	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	586	Open in IMG/M
3300015200\|Ga0173480_10350711	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	841	Open in IMG/M
3300015372\|Ga0132256_100388806	All Organisms → cellular organisms → Bacteria → Proteobacteria	1495	Open in IMG/M
3300015372\|Ga0132256_101192332	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	875	Open in IMG/M
3300015372\|Ga0132256_103673080	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	516	Open in IMG/M
3300015373\|Ga0132257_100456494	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1561	Open in IMG/M
3300015374\|Ga0132255_104047505	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	622	Open in IMG/M
3300015374\|Ga0132255_104359504	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	600	Open in IMG/M
3300019362\|Ga0173479_10328911	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	709	Open in IMG/M
3300022889\|Ga0247785_1042940	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	557	Open in IMG/M
3300023102\|Ga0247754_1183336	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	526	Open in IMG/M
3300023261\|Ga0247796_1035499	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	827	Open in IMG/M
3300025899\|Ga0207642_10638802	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	666	Open in IMG/M
3300025901\|Ga0207688_10250869	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1072	Open in IMG/M
3300025901\|Ga0207688_11031132	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	520	Open in IMG/M
3300025908\|Ga0207643_10895799	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	575	Open in IMG/M
3300025930\|Ga0207701_10987502	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	702	Open in IMG/M
3300025932\|Ga0207690_10917157	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	727	Open in IMG/M
3300025936\|Ga0207670_10923696	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	732	Open in IMG/M
3300025936\|Ga0207670_11037157	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	691	Open in IMG/M
3300025937\|Ga0207669_10845200	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	762	Open in IMG/M
3300025938\|Ga0207704_10663987	All Organisms → cellular organisms → Bacteria → Proteobacteria	860	Open in IMG/M
3300025940\|Ga0207691_10086573	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2811	Open in IMG/M
3300025981\|Ga0207640_11191711	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	677	Open in IMG/M
3300026023\|Ga0207677_11284445	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	672	Open in IMG/M
3300026067\|Ga0207678_11599565	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	574	Open in IMG/M
3300026075\|Ga0207708_10237978	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1463	Open in IMG/M
3300026075\|Ga0207708_11359826	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	623	Open in IMG/M
3300026088\|Ga0207641_10470795	All Organisms → cellular organisms → Bacteria	1217	Open in IMG/M
3300026089\|Ga0207648_10448587	Not Available	1174	Open in IMG/M
3300027857\|Ga0209166_10671225	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	523	Open in IMG/M
3300028381\|Ga0268264_12548098	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	516	Open in IMG/M
3300028592\|Ga0247822_11419396	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	585	Open in IMG/M
3300028597\|Ga0247820_10832976	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	650	Open in IMG/M
3300028799\|Ga0307284_10049831	All Organisms → cellular organisms → Bacteria → Proteobacteria	1468	Open in IMG/M
3300028889\|Ga0247827_11242871	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	518	Open in IMG/M
3300031538\|Ga0310888_10410631	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	796	Open in IMG/M
3300031547\|Ga0310887_10225941	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1032	Open in IMG/M
3300031547\|Ga0310887_10520406	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	719	Open in IMG/M
3300031562\|Ga0310886_10069002	All Organisms → cellular organisms → Bacteria → Proteobacteria	1668	Open in IMG/M
3300031562\|Ga0310886_10526318	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	717	Open in IMG/M
3300031854\|Ga0310904_10228550	All Organisms → cellular organisms → Bacteria → Proteobacteria	1139	Open in IMG/M
3300031892\|Ga0310893_10119604	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	990	Open in IMG/M
3300031901\|Ga0307406_10400466	All Organisms → cellular organisms → Bacteria → Proteobacteria	1088	Open in IMG/M
3300031908\|Ga0310900_10085867	All Organisms → cellular organisms → Bacteria → Proteobacteria	1975	Open in IMG/M
3300031943\|Ga0310885_10109465	All Organisms → cellular organisms → Bacteria → Acidobacteria	1267	Open in IMG/M
3300032000\|Ga0310903_10279230	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	814	Open in IMG/M
3300032017\|Ga0310899_10244873	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	812	Open in IMG/M
3300032075\|Ga0310890_11706404	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	522	Open in IMG/M
3300032122\|Ga0310895_10135175	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1048	Open in IMG/M
3300032421\|Ga0310812_10353456	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	658	Open in IMG/M
3300033550\|Ga0247829_10964464	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	709	Open in IMG/M
3300033551\|Ga0247830_11419325	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	555	Open in IMG/M
3300034150\|Ga0364933_192114	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	535	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	54.20%
Host-Associated	Host-Associated	45.80%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	54.20%
Plants	Host-Associated → Plants	45.80%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	53.44%
Rhizosphere	Host-Associated → Plants → Rhizosphere	25.19%
Rhizoplane	Host-Associated → Plants → Rhizoplane	20.61%
Floodplain	Environmental → Terrestrial → Floodplain	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	42.75%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	15.27%
Soil	Host-Associated → Plants → Rhizosphere → Soil	12.98%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	12.21%
Loam	Environmental → Terrestrial → Soil → Loam	10.69%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	5.34%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	18.32%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	15.27%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	13.74%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	12.98%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	12.21%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	8.40%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	7.63%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	5.34%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.05%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.53%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.76%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.76%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	13.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	8.40%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	7.63%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	6.87%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	5.34%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.34%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	3.82%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	3.05%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.05%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	3.05%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	3.05%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	2.29%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.29%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.29%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.29%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	2.29%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.29%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.29%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	2.29%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	2.29%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	2.29%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.53%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	1.53%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.53%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.53%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil	0.76%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.76%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.76%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.76%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.76%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.76%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.76%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.76%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.76%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.76%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2189573001	Grass soil microbial communities from Rothamsted Park, UK - FD2 (NaCl 300g/L 5ml)	Environmental	Open in IMG/M
2228664022	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000891	Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soil	Environmental	Open in IMG/M
3300001991	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2	Host-Associated	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005333	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG	Host-Associated	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300005985	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012893	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S059-202B-1	Environmental	Open in IMG/M
3300012898	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S194-509B-1	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300015200	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2)	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300019362	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)	Environmental	Open in IMG/M
3300022889	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S096-311B-4	Environmental	Open in IMG/M
3300023102	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S184-509B-5	Environmental	Open in IMG/M
3300023261	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S166-409R-6	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027857	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028592	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Cellulose_Day30	Environmental	Open in IMG/M
3300028597	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day14	Environmental	Open in IMG/M
3300028799	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_123	Environmental	Open in IMG/M
3300028889	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day2	Environmental	Open in IMG/M
3300031538	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1	Environmental	Open in IMG/M
3300031547	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4	Environmental	Open in IMG/M
3300031562	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3	Environmental	Open in IMG/M
3300031854	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1	Environmental	Open in IMG/M
3300031892	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D2	Environmental	Open in IMG/M
3300031901	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2	Host-Associated	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300031943	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D2	Environmental	Open in IMG/M
3300032000	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D3	Environmental	Open in IMG/M
3300032017	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D4	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032122	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D4	Environmental	Open in IMG/M
3300032421	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NN3	Environmental	Open in IMG/M
3300033550	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4	Environmental	Open in IMG/M
3300033551	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5	Environmental	Open in IMG/M
3300034150	Sediment microbial communities from East River floodplain, Colorado, United States - 25_j17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
FD2_07058570	2189573001	Grass Soil	YEQPHTYRYIFDRSPGDPPYALEEWCDASDPIEKQSIVPPKQIIK
INPgaii200_09084313	2228664022	Soil	FERAPAVKSNGALVSYALEEWCDAGDPIEKQSIVPPKQTIKK
JGI10214J12806_110843901	3300000891	Soil	TWDDPAIYEQPHTYRYLFDRAPGNPPYALEEWCDASDPIEKQSIVPPKQIIK*
JGI10214J12806_114206572	3300000891	Soil	TGNYTWEAPAIYEQPHTYRYIFDRAPGDPPYALEEWCDASDPIEKQSIVPPKQIKG*
JGI24743J22301_100436323	3300001991	Corn, Switchgrass And Miscanthus Rhizosphere	RAPTVNSGGKPVSYALEEWCDAGDPVEKQSIVPPKQIIK*
Ga0062593_1022628991	3300004114	Soil	PKVYQKPHVYRYYFERAPTVESKGTKVSYALEEWCDAGDPIEKQSIIPPKQIIK*
Ga0063455_1000331334	3300004153	Soil	PTIYEAPHVYRYYFERAPTVSSGGSAISYALEEWCDAGDPVEKQSIVPPKQIIKKK*
Ga0062590_1006520201	3300004157	Soil	IYQAPHVYRYQFERAPTVSSGGAPVSYALEEWCDAGDPVEKQSIVPPKQIIK*
Ga0062595_1001197031	3300004479	Soil	YTWDDPAIYEQPHTYRYIFDRAPGDPAYALEEWCDASDPIEKQSIVPPKQIIKRRP*
Ga0062592_1018540612	3300004480	Soil	TYRYIFDRSPGNPPYALEEWCDASDPIEKQSIVPPKQIIK*
Ga0062591_1013393032	3300004643	Soil	VYRYYFERAPSMNSGGKPVSYALEEWCDAGDPVEKQSIIPPKQTIKK*
Ga0062591_1019805292	3300004643	Soil	YQKPHQYRYYFERAPTVSSGGSPVSYALEEWCDAGDPVEKQSIVPPKQIIK*
Ga0062594_1008947463	3300005093	Soil	QRLTITYTWNDPKIYQAPHVYRYQFERAPTVSSGGAPVSYALEEWCDAGDPVEKQSIVPPKQIIK*
Ga0065715_103273453	3300005293	Miscanthus Rhizosphere	YRYYFDRAPAVESRGTRISYALEEWCDAGDPIEKQSIVPPKQIIK*
Ga0065705_105254251	3300005294	Switchgrass Rhizosphere	YYFERAPSMNSGGKPVSYALEEWCDAGDPVEKQSIIPPKQTIKK*
Ga0065705_111267562	3300005294	Switchgrass Rhizosphere	HVYRYYFDRSPTLDSGGTPVSYALEEWCDAGDPIEKQSIVPPKQIIK*
Ga0065707_105945821	3300005295	Switchgrass Rhizosphere	RLTVTYTWDDPKVYQKPHVYRYYFERAPAIESRGTKVSYALEEWCDAGDPIEKQSIVPPKQIIK*
Ga0066388_1046051132	3300005332	Tropical Forest Soil	YRYYFDRAPTMNSGGTPVSYALEEWCDAGDPIEKQSIIPPKQIIK*
Ga0070677_104184361	3300005333	Miscanthus Rhizosphere	TITYTWNDPKIYQAPHVYRYQFERAPTVSSGGAPVSYALEEWCDAGDPVEKQSIVPPKQIIK*
Ga0068869_1003192533	3300005334	Miscanthus Rhizosphere	KKLTITYTWEDSKIYQQPHTYSYVFDRVPNAYAFEDWCDASDPIEKQSIVPPPQR*
Ga0070689_1000921475	3300005340	Switchgrass Rhizosphere	QPHTYRYIFDRAPGDPAYALEEWCDASDPIEKQSIVPPKQIKGGGN*
Ga0070689_1013534411	3300005340	Switchgrass Rhizosphere	DGKTMTLTYTWNDPVIYEQPHTYRYIFDRSPGDPPYALEEWCDASDPIEKQSIVPPKQIIK*
Ga0070668_1017703092	3300005347	Switchgrass Rhizosphere	DGKTMTVNYTWEDPAIYEQPHTYRYIFDRAPGDPPYALEEWCDASDPIEKQSIVPPKQIKG*
Ga0070671_1000459601	3300005355	Switchgrass Rhizosphere	LTVTYTWNDPKVYQKPHEYRYYFERAPTVNSGGKPVSYALEEWCDAGDPVEKQSIVPPKQIIK*
Ga0070701_104565081	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	LTITYTWNDPKIYQAPHVYRYQFERAPTVSSGGAPVSYALEEWCDAGDPVEKQSIVPPKQIIK*
Ga0070700_1020137311	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	QKPHVYRYYFDRAPMVESRGTKVSYALEEWCDAGDPVEKQSIIPPKQIIK*
Ga0070662_1014160071	3300005457	Corn Rhizosphere	TVTYTWNDPKIYAAPHVYRYYFERAPTVSSGGAPVSYALEEWCDAGDPVEKQSIVPPKQIIK*
Ga0070706_1013965691	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	HVYRYYFERAPTVSSGGAAVSYALEEWCDAGDPVEKQSIVPPKQIIK*
Ga0070693_1001080344	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	TYRYLFDRAPGNPPYALEEWCDASDPIEKQSIVPPKQIIK*
Ga0070704_1014252282	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	MTITYTWDDPAIYEQPHTYRYLFDRAPGNPPYALEEWCDASDPIEKQSIVPPKQIIK*
Ga0070664_1012837953	3300005564	Corn Rhizosphere	AVKSNGALVSYALEEWCDAGDPIEKQSIVPPKQTIKK*
Ga0068857_1023630922	3300005577	Corn Rhizosphere	KPHVYRLYFERAPAVKSNGALVSYALEEWCDAGDPIEKQSIVPPKQTIKK*
Ga0068852_1012758403	3300005616	Corn Rhizosphere	YYFERAPTVNSGGKPVSYALEEWCDAGDPVEKQSIVPPKQIIK*
Ga0068866_110212171	3300005718	Miscanthus Rhizosphere	YRLYFERAPAVKSNGALVSYALEEWCDAGDPIEKQSIVPPKQTIKK*
Ga0066903_1035951443	3300005764	Tropical Forest Soil	YQKPHVYKYFFDRAPTIDVAGKAVSYALEEWCDAGDPIEKQSIIPPKQIDIK*
Ga0068860_1024150451	3300005843	Switchgrass Rhizosphere	RFTIVYTWDDPKIYQKPHVYRLYFERAPSVTSNGAPVSYALEEWCDAGDPIEKQSIVPPKQTIKK*
Ga0081455_110336061	3300005937	Tabebuia Heterophylla Rhizosphere	ALSQETSPDGKTMTVTYTWDDAALYEQPHTYRYFFDRAPGNPPYAMEEWCDASDPVEKQSIVPPKQIIK*
Ga0081539_104622872	3300005985	Tabebuia Heterophylla Rhizosphere	DPKIYQKPHVYRLYFERAPAVSSKGVPVSYALEEWCDAGDPIEKQSIVPPKQTIRK*
Ga0075421_10000375820	3300006845	Populus Rhizosphere	YRYYFDRSPMLDSAGTPVSYALEEWCDAGDPIEKQSIVPPKQIIK*
Ga0075421_1014091843	3300006845	Populus Rhizosphere	KLYQKPHVYRYYFDRSPMLESAGTRVSYALEEWCDAGDPIEKQSIVPPKQTIK*
Ga0075420_1000238829	3300006853	Populus Rhizosphere	YTWDDPKVYQKPHVYRYYFDRSPMLDSAGTPVSYALEEWCDAGDPIEKQSIVPPKQIIK*
Ga0075425_1026033712	3300006854	Populus Rhizosphere	PHVYRYYFERAPTVSSGGAAVSYALEEWCDAGDPVEKQSIVPPKQIIK*
Ga0075434_1001278681	3300006871	Populus Rhizosphere	SPATRLIERFQVAPDGRTMTLTYTWDDPAIYEQPHTYRYIFDRAPGDPAYALEEWCDASDPIEKQSIVPPKQIKGGGN*
Ga0068865_1003054234	3300006881	Miscanthus Rhizosphere	FERAPAVKSNGALVSYALEEWCDAGDPIEKQSIVPPKQTIKK*
Ga0068865_1021376541	3300006881	Miscanthus Rhizosphere	TYTWNDPKIYQAPHVYRYQFERAPTVSSGGAPVSYALEEWCDAGDPVEKQSIVPPKQIIK
Ga0075426_108368471	3300006903	Populus Rhizosphere	TSNGALVSYALEEWCDAGDPIEKQSIVPPKQTIRK*
Ga0111539_122422072	3300009094	Populus Rhizosphere	PTVTSGGLPVSYALEEWCDAGDPVEKQSIVPPKQIIK*
Ga0111539_123829802	3300009094	Populus Rhizosphere	IYQKPHVYRYYFERAPTVSSHGAEVSYALEEWCDAGDPIEKQSIVPPKQIIK*
Ga0111538_114860551	3300009156	Populus Rhizosphere	VYQKPHVYRYYFERAPTVESKGTKVSYALEEWCDAGDPIEKQSIIPPKQIIK*
Ga0075423_130739372	3300009162	Populus Rhizosphere	YFERSPAVKSNGALVSYALEEWCDAGDPIEKQSIVPPKQTIKK*
Ga0105248_114449491	3300009177	Switchgrass Rhizosphere	TWEDPKIYQKPHAYRLYFERAPAVKSNGALVSYALEEWCDAGDPIEKQSIVPPKQTIKK*
Ga0126376_114546182	3300010359	Tropical Forest Soil	VYRLYFERAPAVSSKGALVSYALEEWCDAGDPIEKQSIVPPKQTIKK*
Ga0126377_100293391	3300010362	Tropical Forest Soil	IYEQPHTYRYLFDRAPGNPPYALEEWCDASDPIEKQSIVPPKQIIK*
Ga0126377_135675931	3300010362	Tropical Forest Soil	APAVKSNGALVSYALEEWCDAGDPIEKQSIVPPKQTIKK*
Ga0134125_115232691	3300010371	Terrestrial Soil	PKIYQAPHVYRYQFERAPTVSSGGAPVSYALEEWCDAGDPVEKQSIVPPKQIIK*
Ga0134124_115644071	3300010397	Terrestrial Soil	MTLTYTWDDPALYEQPHTYHYIFDRAPGNPPYAMEEWCDASDPIEKQSIVPPKQIVK*
Ga0134127_112284203	3300010399	Terrestrial Soil	YRYYFERAPTVSAGGSPVSYALEEWCDAGDPVEKQSIVPPKQIIK*
Ga0134123_125149652	3300010403	Terrestrial Soil	YRYYCERAPTVSSAGAPVSYALEEWCDAGDPVEKQSIVPPKQIIK*
Ga0105246_100615351	3300011119	Miscanthus Rhizosphere	TQLVERFQVAPDGQTMTVTYTWDDPAIYEQPHTYRYLFDRAPGNPPYALEEWCDASDPIEKQSIVPPKQIIK*
Ga0150985_1004923283	3300012212	Avena Fatua Rhizosphere	VDSGGAPVSYALEEWCDAGDPIEKQSIVPPKQIIK*
Ga0150985_1105432481	3300012212	Avena Fatua Rhizosphere	KPHSYHYVFDRAPGDPAYALEEWCDASDPIEKQSIVPPKQIKGGGK*
Ga0150985_1165421153	3300012212	Avena Fatua Rhizosphere	VNSGGKPVSYALEEWCDAGDPIEKQSIVPPKQIIK*
Ga0150984_1022689511	3300012469	Avena Fatua Rhizosphere	KIYQKPHVYQYFFDRAPTVDVAGKSISYALEEWCDAGDPIEKQSIVPPKQVEIK*
Ga0150984_1035132401	3300012469	Avena Fatua Rhizosphere	GQRLTVTYTWNDPKVYQKPHEYRYYFERAPTVNSGGQPVSYALEEWCDAGDPVEKQSIVPPKQIIK*
Ga0150984_1117213183	3300012469	Avena Fatua Rhizosphere	HVYSYYFERAPTVSSGGSPVSYALEEWCDSGDPVEKQSIVPPKQIIK*
Ga0150984_1175558583	3300012469	Avena Fatua Rhizosphere	TYTWNDPKIYEAPHVYRYYFERAPTVSSGGSAISYALEEWCDAGDPVEKQSIVPPKQIIK
Ga0150984_1193529174	3300012469	Avena Fatua Rhizosphere	IYQKPHEYRYYFERAPKIESKAGKFSYALEEWCDAGDPIEQQSIVPPKQIIK*
Ga0157284_102765692	3300012893	Soil	LTYTWDDSAIYEQAHTYRYIFDRAPGDPAYALEEWCDASDPIEKQSIVPPKQIIK*
Ga0157293_100690743	3300012898	Soil	ITYTWNDPKIYQKPHVYRYYFERAPTVNSGGAAVSYALEEWCDAGDPVERQSIVPPKQIIK*
Ga0126375_115092581	3300012948	Tropical Forest Soil	QKPHVYRLYFERSPAVKSNGALVSYAMEEWCDAGDPIEKQSIVPPKQTIKK*
Ga0164300_102516803	3300012951	Soil	ITYTWNDPKIYQTPHVYRYYFERAPTVNSGGAPVSYALEEWCDAGDPVEKQSIVPPKQIIK*
Ga0164298_107443791	3300012955	Soil	NDPKIYEAPHVYRYYFERAPTVSSGGSPVSYALEEWCDAGDPVEKQSIVPPKQIIK*
Ga0164308_103873584	3300012985	Soil	APTVTSHGAAVSYALEEWCDAGDPVEKQSIVPPKQIIK*
Ga0164308_116635611	3300012985	Soil	VSSGGSPVSYALEEWCDAGDPVEKQSIVPPKQIIKKK*
Ga0164305_117935722	3300012989	Soil	YTWNDPKIYEAPHVYRYYFERAPTVSSGGSPVSYALEEWCDAGDPVEKQSIVPPKQIIK*
Ga0157378_115056231	3300013297	Miscanthus Rhizosphere	EHFQVAPDGKTMTLTYTWNDPVIYEQPHTYRYIFDRSPGDPPYALEEWCDASDPIEKQSIVPPKQIIK*
Ga0157380_108768521	3300014326	Switchgrass Rhizosphere	QVAADGKTMTLTYTWDDSAIYEQAHTYRYIFDRAPGDPAYALEEWCDASDPIEKQSIVPPKQIIK*
Ga0157377_112076511	3300014745	Miscanthus Rhizosphere	RLYFERAPAVKSNGALVSYALEEWCDAGDPIEKQSIVPPKQTIKK*
Ga0173480_103507111	3300015200	Soil	ERAPMVESRGAKVSYALEEWCDAGDPVEKQSIIPPKQIIK*
Ga0132256_1003888061	3300015372	Arabidopsis Rhizosphere	WEDPKLYQKPHVYRYYFDRSPMLDSAGAKVSYALEEWCDAGDPIEKQSIIPPKQIIK*
Ga0132256_1011923321	3300015372	Arabidopsis Rhizosphere	TYTWDDPKIYQTPHVYRYYFERAPTVSSGGSPVSYALEEWCDAGDPVEKQSIVPPKQIIK
Ga0132256_1036730801	3300015372	Arabidopsis Rhizosphere	DPAIYEQPHTYRYIFDRAPGDPAYALEEWCDASDPIEKQSIVPPKQIKGGGN*
Ga0132257_1004564941	3300015373	Arabidopsis Rhizosphere	PAVKSNGALVSYALEEWCDAGDPIEKQSIVPPKQTIKK*
Ga0132255_1040475052	3300015374	Arabidopsis Rhizosphere	FERAPTVSSGGAAVSYALEEWCDAGDPVEKQSIVPPKQIIK*
Ga0132255_1043595042	3300015374	Arabidopsis Rhizosphere	LVERFQVAPDGQSMTISDTWDDPAIYEQPHTYRYLFDRAPGNPPYALEEWCDASDPIEKQSIVPPKQIIK*
Ga0173479_103289111	3300019362	Soil	AATHLVERFQVAPDGKTMTVTYTWNDPAIYEQPHTYRYIFDRSPGDPPYALEEWCDASDPIEKQSIVPPKQIIK
Ga0247785_10429401	3300022889	Soil	ERAPMVESRGAKVSYALEEWCDAGDPVEKQSIIPPKQIIK
Ga0247754_11833361	3300023102	Soil	YQKPHVYRYYFERAPMVESRGAKVSYALEEWCDAGDPVEKQSIIPPKQIIK
Ga0247796_10354993	3300023261	Soil	VESRGAKVSYALEEWCDAGDPVEKQSIIPPKQIIK
Ga0207642_106388021	3300025899	Miscanthus Rhizosphere	DPKIYQAPHVYRYQFERAPTVSSGGAPVSYALEEWCDAGDPVEKQSIVPPKQIIK
Ga0207688_102508693	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	TWDDPKVYQKPHVYRYYFERAPMVESRGAKVSYALEEWCDAGDPVEKQSIIPPKQIIK
Ga0207688_110311322	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	QKPHVYRLYFERAPAVKSNGALVSYALEEWCDAGDPIEKQSIVPPKQTIKK
Ga0207643_108957992	3300025908	Miscanthus Rhizosphere	VYRYYFDRSPMLESAGTPVSYALEEWCDAGDPIEKQSIIPPKQTIK
Ga0207701_109875021	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	RSPTLDSGGTPVSYALEEWCDAGDPIEKQSIVPPKQIIK
Ga0207690_109171572	3300025932	Corn Rhizosphere	VSSGGAAVSYALEEWCDAGDPVEKQSIVPPKQIIK
Ga0207670_109236961	3300025936	Switchgrass Rhizosphere	EQPHTYRYIFDRAPGDPAYALEEWCDASDPIEKQSIVPPKQIKGGGN
Ga0207670_110371572	3300025936	Switchgrass Rhizosphere	KTMTLTYTWNDPVIYEQPHTYRYIFDRSPGDPPYALEEWCDASDPIEKQSIVPPKQIIK
Ga0207669_108452003	3300025937	Miscanthus Rhizosphere	FERAPTVSSGGSSVSYALEEWCDAGDPVEKQSIVPPKQIIK
Ga0207704_106639871	3300025938	Miscanthus Rhizosphere	HFERAPAVKSNGALVSYALEEWCDAGDPIEKQSIVPPKQTIKK
Ga0207691_100865736	3300025940	Miscanthus Rhizosphere	YRYYFERAPTVNSGGKPVSYALEEWCDAGDPVEKQSIVPPKQIIK
Ga0207640_111917111	3300025981	Corn Rhizosphere	PKLYQKPHVYRYYFDRSPMLESAGAKVSYALEEWCDAGDPIEKQSIIPPKQVIK
Ga0207677_112844451	3300026023	Miscanthus Rhizosphere	GRRLTIVYTWEDPKIYQKPHVYRLYFERAPVVKSNGALVSYALEEWCDAGDPIEKQSIVPPKQTIKK
Ga0207678_115995652	3300026067	Corn Rhizosphere	KSNGALVSYALEEWCDAGDPIEKQSIVPPKQIIKKK
Ga0207708_102379781	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	YTWDDPKIYQKPHVYRLYFERAPSVTSNGAPVSYALEEWCDAGDPIEKQSIVPPKQTIKK
Ga0207708_113598262	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	MTLTYTWNDPAIYEQPHTYRYIFDRSPGDPPYALEEWCDASDPIEKQSIVPPKQIIK
Ga0207641_104707952	3300026088	Switchgrass Rhizosphere	VEDPKIYQKPHVYRLYFERAPAVKSNGALVSYALEEWCDAGDPIEKQSIVPPKQTIKK
Ga0207648_104485871	3300026089	Miscanthus Rhizosphere	QRLTIVYTWEDPKIYQKPHVYRLYFERAPAVKSNGALVSYALEEWCDAGDPIEKQSIVPPKQTIKK
Ga0209166_106712251	3300027857	Surface Soil	ITYTWNDPKIYQAPHVYRYYFERAPTVSSGGAQVSYALEEWCDAGDPIEKQSIVPPKQII
Ga0268264_125480982	3300028381	Switchgrass Rhizosphere	RLTVTYTWDDPKVYQKPHVYRYYFERAPMVESRGAKVSYALEEWCDAGDPVEKQSIIPPKQIIK
Ga0247822_114193961	3300028592	Soil	YYFDRSPMLESAGTPVSYALEEWCDAGDPIEKQSIVPPKQTIK
Ga0247820_108329762	3300028597	Soil	YTWTDPKVYQKPHQYRYYFERAPTVSSGGSPVSYALEEWCDAGDPVEKQSIVPPKQIIK
Ga0307284_100498311	3300028799	Soil	PTVSSGGSPVSYALEEWCDAGDPVEKQSIVPPKQIIK
Ga0247827_112428712	3300028889	Soil	AHTYRYIFDRAPGDPAYALEEWCDASDPIEKQSIVPPKQIIK
Ga0310888_104106313	3300031538	Soil	VYRYYFDRAPTVNSGGTAMSYALEEWCDAGDPIEKQSIVPPKQIIK
Ga0310887_102259411	3300031547	Soil	DDPKVYQKPHVYRYYFDRAPTVNSGGTAMSYALEEWCDAGDPIEKQSIVPPKQIIK
Ga0310887_105204061	3300031547	Soil	LAITYTWNDPKLYQTPHVYRYYFERAPTVSAGGSPVSYALEEWCDAGDPLEKQSIVPPKQIIK
Ga0310886_100690024	3300031562	Soil	LTITYTWNDPKIYQKPHVYRYYFERAPTVNSGGAAVSYALEEWCDAGDPVEKQSIVPPKQIIK
Ga0310886_105263181	3300031562	Soil	AGAKISYALEEWCDAGDPVEKQSIVPPKQIKQQPR
Ga0310904_102285503	3300031854	Soil	DPKLYQKPHVYRYYFDRSPMLESAGTPVSYALEEWCDAGDPIEKQSIVPPKQTIK
Ga0310893_101196041	3300031892	Soil	KIYQKPHVYRYYFERAPTVSSGGAAVSYALEEWCDAGDPLEKQSIVPPKQIIK
Ga0307406_104004663	3300031901	Rhizosphere	ERSPTIDSAGTPVSYALEEWCDAGDPVEKQSIVPPRQIIK
Ga0310900_100858671	3300031908	Soil	ITYTWDDPKLYQKPHVYRYYFDRSPMLESAGTPVSYALEEWCDAGDPIEKQSIVPPKQTI
Ga0310885_101094654	3300031943	Soil	WTDPKIYQKPHVYRYYFERAPTVNSGGAAVSYALEEWCDAGDPVEKQSIVPPKQIIK
Ga0310903_102792301	3300032000	Soil	WNDPKIYQAPHVYRYQFERAPTVSSGGAPVSYALEEWCDAGDPLEKQSIVPPKQIIK
Ga0310899_102448733	3300032017	Soil	KPHVYRYYFDRAPTVNSGGTAMSYALEEWCDAGDPIEKQSIVPPKQIIK
Ga0310890_117064042	3300032075	Soil	RLTVTYTWEDPKVYQKPHVYRYYFDRAPMVESKGTKVSYALEEWCDAGDPVEKQSIIPPKQIIK
Ga0310895_101351753	3300032122	Soil	DPKIYQKPHVYRYYFERAPTVNSGGAAVSYALEEWCDAGDPVEKQSIVPPKQIIK
Ga0310812_103534562	3300032421	Soil	GQSMTISYTWDDPAIYEQPHTYRYLFDRAPGNPPYALEEWCDASDPIEKQSIVPPKQIIK
Ga0247829_109644641	3300033550	Soil	TYTWDDPKIYQKPHVYRYYFERSPLIESRGAKISYALEEWCDAGDPVEKQSIVPPKQIK
Ga0247830_114193251	3300033551	Soil	HVYRYYFDRSPMLDSAGTPVSYALEEWCDAGDPIEKQSIVPPKQIIK
Ga0364933_192114_383_523	3300034150	Sediment	VYRYYFERAPTVSSGGAAVSYALEEWCDAGDPVEKQSIVPPKQIIK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F061629

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences