NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F061606

Metagenome Family F061606

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F061606
Family Type Metagenome
Number of Sequences 131
Average Sequence Length 90 residues
Representative Sequence MDQNPPVNDPGPVTRENALEKVLALSVSQAHEIWHAMQLITANGSLEGLPRPVVQIAMELNYFLNAWKVVAEKAVLHERLISKPRRRGFWVR
Number of Associated Samples 108
Number of Associated Scaffolds 131

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 10.69 %
% of genes near scaffold ends (potentially truncated) 38.17 %
% of genes from short scaffolds (< 2000 bps) 89.31 %
Associated GOLD sequencing projects 94
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (86.260 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(9.160 % of family members)
Environment Ontology (ENVO) Unclassified
(53.435 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(72.519 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 63.04%    β-sheet: 0.00%    Coil/Unstructured: 36.96%
Feature Viewer
Powered by Feature Viewer


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 131 Family Scaffolds
PF04964Flp_Fap 3.82
PF00072Response_reg 2.29
PF01478Peptidase_A24 2.29
PF02518HATPase_c 2.29
PF01475FUR 1.53
PF00990GGDEF 1.53
PF12796Ank_2 0.76
PF13637Ank_4 0.76
PF01435Peptidase_M48 0.76
PF05065Phage_capsid 0.76
PF12244DUF3606 0.76

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 131 Family Scaffolds
COG3847Flp pilus assembly protein, pilin FlpExtracellular structures [W] 3.82
COG0735Fe2+ or Zn2+ uptake regulation protein Fur/ZurInorganic ion transport and metabolism [P] 1.53
COG4653Predicted phage phi-C31 gp36 major capsid-like proteinMobilome: prophages, transposons [X] 0.76


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A86.26 %
All OrganismsrootAll Organisms13.74 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2162886012|MBSR1b_contig_7210458Not Available1921Open in IMG/M
3300000364|INPhiseqgaiiFebDRAFT_105028858Not Available886Open in IMG/M
3300002128|JGI24036J26619_10030253Not Available1026Open in IMG/M
3300002128|JGI24036J26619_10112742Not Available559Open in IMG/M
3300002155|JGI24033J26618_1040827Not Available647Open in IMG/M
3300004157|Ga0062590_100578230Not Available981Open in IMG/M
3300004463|Ga0063356_102468162Not Available796Open in IMG/M
3300004479|Ga0062595_100338506Not Available1040Open in IMG/M
3300004479|Ga0062595_101261847Not Available661Open in IMG/M
3300005093|Ga0062594_102853850Not Available538Open in IMG/M
3300005165|Ga0066869_10055972Not Available706Open in IMG/M
3300005290|Ga0065712_10365576Not Available769Open in IMG/M
3300005293|Ga0065715_10267187Not Available1056Open in IMG/M
3300005295|Ga0065707_10447780Not Available803Open in IMG/M
3300005328|Ga0070676_10051397All Organisms → cellular organisms → Bacteria → Proteobacteria2420Open in IMG/M
3300005328|Ga0070676_10076784Not Available2018Open in IMG/M
3300005328|Ga0070676_10147846Not Available1501Open in IMG/M
3300005330|Ga0070690_100083593Not Available2092Open in IMG/M
3300005331|Ga0070670_100230064All Organisms → cellular organisms → Bacteria1613Open in IMG/M
3300005331|Ga0070670_101228698Not Available685Open in IMG/M
3300005333|Ga0070677_10294707Not Available822Open in IMG/M
3300005334|Ga0068869_100151391All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Comamonas → Comamonas testosteroni1799Open in IMG/M
3300005335|Ga0070666_10213202Not Available1360Open in IMG/M
3300005335|Ga0070666_11409812Not Available521Open in IMG/M
3300005338|Ga0068868_100246497Not Available1502Open in IMG/M
3300005341|Ga0070691_10694768Not Available610Open in IMG/M
3300005354|Ga0070675_100756781Not Available887Open in IMG/M
3300005365|Ga0070688_100011873All Organisms → cellular organisms → Bacteria4861Open in IMG/M
3300005367|Ga0070667_101089490Not Available746Open in IMG/M
3300005367|Ga0070667_101109459Not Available739Open in IMG/M
3300005440|Ga0070705_100075586Not Available2051Open in IMG/M
3300005441|Ga0070700_101216642Not Available629Open in IMG/M
3300005457|Ga0070662_100117460Not Available2034Open in IMG/M
3300005526|Ga0073909_10311918Not Available718Open in IMG/M
3300005543|Ga0070672_100741649Not Available861Open in IMG/M
3300005616|Ga0068852_100785451Not Available966Open in IMG/M
3300005617|Ga0068859_100336117Not Available1605Open in IMG/M
3300005618|Ga0068864_101674879Not Available641Open in IMG/M
3300005834|Ga0068851_10873833Not Available562Open in IMG/M
3300005840|Ga0068870_10674548Not Available710Open in IMG/M
3300005841|Ga0068863_100501247Not Available1196Open in IMG/M
3300005842|Ga0068858_100297405All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Comamonas → Comamonas testosteroni1539Open in IMG/M
3300005844|Ga0068862_100094906Not Available2601Open in IMG/M
3300005844|Ga0068862_101095137Not Available791Open in IMG/M
3300006854|Ga0075425_102711085Not Available546Open in IMG/M
3300006880|Ga0075429_101031273Not Available719Open in IMG/M
3300009094|Ga0111539_10642428Not Available1236Open in IMG/M
3300009094|Ga0111539_12439659Not Available607Open in IMG/M
3300009098|Ga0105245_11690604Not Available685Open in IMG/M
3300009156|Ga0111538_11055139Not Available1028Open in IMG/M
3300009553|Ga0105249_10876558Not Available964Open in IMG/M
3300009553|Ga0105249_10916519Not Available944Open in IMG/M
3300010401|Ga0134121_10007108All Organisms → cellular organisms → Bacteria9010Open in IMG/M
3300011119|Ga0105246_12153729Not Available541Open in IMG/M
3300012902|Ga0157291_10413771Not Available503Open in IMG/M
3300012904|Ga0157282_10127015Not Available750Open in IMG/M
3300012905|Ga0157296_10037149Not Available1073Open in IMG/M
3300012924|Ga0137413_10182866All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium HGW-Betaproteobacteria-71396Open in IMG/M
3300012957|Ga0164303_11298259Not Available538Open in IMG/M
3300012961|Ga0164302_11425346Not Available567Open in IMG/M
3300013096|Ga0157307_1073009Not Available684Open in IMG/M
3300013296|Ga0157374_10239055Not Available1786Open in IMG/M
3300013296|Ga0157374_12859195Not Available510Open in IMG/M
3300013297|Ga0157378_10440743Not Available1291Open in IMG/M
3300013297|Ga0157378_10556801Not Available1153Open in IMG/M
3300013306|Ga0163162_10976016Not Available957Open in IMG/M
3300013308|Ga0157375_10511240Not Available1365Open in IMG/M
3300014325|Ga0163163_12197971Not Available611Open in IMG/M
3300014326|Ga0157380_10277131Not Available1532Open in IMG/M
3300014326|Ga0157380_10355129Not Available1373Open in IMG/M
3300014969|Ga0157376_10348816Not Available1416Open in IMG/M
3300017965|Ga0190266_10101277Not Available1184Open in IMG/M
3300018067|Ga0184611_1170863Not Available772Open in IMG/M
3300018070|Ga0184631_10468464Not Available516Open in IMG/M
3300018072|Ga0184635_10116688Not Available1060Open in IMG/M
3300018072|Ga0184635_10145508Not Available946Open in IMG/M
3300018073|Ga0184624_10007595All Organisms → cellular organisms → Bacteria → Proteobacteria3631Open in IMG/M
3300018074|Ga0184640_10046597All Organisms → cellular organisms → Bacteria → Proteobacteria1780Open in IMG/M
3300018074|Ga0184640_10280185Not Available757Open in IMG/M
3300018081|Ga0184625_10397446Not Available711Open in IMG/M
3300018083|Ga0184628_10348916Not Available776Open in IMG/M
3300018476|Ga0190274_11758081Not Available714Open in IMG/M
3300018476|Ga0190274_12005267Not Available675Open in IMG/M
3300018476|Ga0190274_12554038Not Available608Open in IMG/M
3300019362|Ga0173479_10044466Not Available1424Open in IMG/M
3300021082|Ga0210380_10065980Not Available1575Open in IMG/M
3300021082|Ga0210380_10067225Not Available1561Open in IMG/M
3300021363|Ga0193699_10469694Not Available516Open in IMG/M
3300022883|Ga0247786_1053126Not Available824Open in IMG/M
3300025271|Ga0207666_1015091Not Available1097Open in IMG/M
3300025290|Ga0207673_1032374Not Available726Open in IMG/M
3300025315|Ga0207697_10006772All Organisms → cellular organisms → Bacteria5153Open in IMG/M
3300025315|Ga0207697_10260516Not Available768Open in IMG/M
3300025893|Ga0207682_10444064Not Available614Open in IMG/M
3300025899|Ga0207642_10026780Not Available2352Open in IMG/M
3300025900|Ga0207710_10267243Not Available858Open in IMG/M
3300025907|Ga0207645_10128610Not Available1648Open in IMG/M
3300025907|Ga0207645_10897074Not Available602Open in IMG/M
3300025908|Ga0207643_10002104All Organisms → cellular organisms → Bacteria10971Open in IMG/M
3300025920|Ga0207649_10546504Not Available886Open in IMG/M
3300025923|Ga0207681_10256867Not Available1366Open in IMG/M
3300025925|Ga0207650_10215923Not Available1542Open in IMG/M
3300025930|Ga0207701_10081108All Organisms → cellular organisms → Bacteria → Proteobacteria2933Open in IMG/M
3300025930|Ga0207701_10381828All Organisms → cellular organisms → Bacteria1215Open in IMG/M
3300025931|Ga0207644_10853342Not Available762Open in IMG/M
3300025935|Ga0207709_10180222All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae1491Open in IMG/M
3300025935|Ga0207709_10841867Not Available743Open in IMG/M
3300025942|Ga0207689_10444759Not Available1083Open in IMG/M
3300025961|Ga0207712_10804507Not Available826Open in IMG/M
3300025972|Ga0207668_11945122Not Available530Open in IMG/M
3300026023|Ga0207677_10216869All Organisms → cellular organisms → Bacteria1532Open in IMG/M
3300026035|Ga0207703_10192328All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales1808Open in IMG/M
3300026067|Ga0207678_10803559Not Available830Open in IMG/M
3300026089|Ga0207648_10411896Not Available1226Open in IMG/M
3300026095|Ga0207676_11491095Not Available673Open in IMG/M
3300026116|Ga0207674_10214538Not Available1873Open in IMG/M
3300026121|Ga0207683_10261800All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae1579Open in IMG/M
3300026121|Ga0207683_10367585Not Available1321Open in IMG/M
3300026142|Ga0207698_11191245Not Available776Open in IMG/M
3300026320|Ga0209131_1056758All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium HGW-Betaproteobacteria-72188Open in IMG/M
3300027907|Ga0207428_10669676Not Available744Open in IMG/M
3300028379|Ga0268266_10968245Not Available823Open in IMG/M
3300028380|Ga0268265_10209041Not Available1699Open in IMG/M
3300028381|Ga0268264_10922662Not Available877Open in IMG/M
3300031538|Ga0310888_10399588Not Available806Open in IMG/M
3300031908|Ga0310900_11411394Not Available585Open in IMG/M
3300032000|Ga0310903_10708052Not Available544Open in IMG/M
3300032012|Ga0310902_10560036Not Available754Open in IMG/M
3300032075|Ga0310890_10291164Not Available1170Open in IMG/M
3300032122|Ga0310895_10381236Not Available686Open in IMG/M
3300032211|Ga0310896_10733093Not Available562Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil9.16%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere8.40%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere7.63%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment6.87%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere6.87%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere6.11%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil5.34%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere4.58%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere4.58%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil3.05%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere3.05%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere3.05%
Corn, Switchgrass And Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere3.05%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere3.05%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere3.05%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere2.29%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere2.29%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere2.29%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment1.53%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere1.53%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere1.53%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere1.53%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.76%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil0.76%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil0.76%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil0.76%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere0.76%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere0.76%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.76%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil0.76%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil0.76%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere0.76%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.76%
Switchgrass RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere0.76%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2162886012Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1Host-AssociatedOpen in IMG/M
3300000364Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300002128Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5EnvironmentalOpen in IMG/M
3300002155Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX- M7Host-AssociatedOpen in IMG/M
3300004157Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2EnvironmentalOpen in IMG/M
3300004463Combined assembly of Arabidopsis thaliana microbial communitiesHost-AssociatedOpen in IMG/M
3300004479Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAsEnvironmentalOpen in IMG/M
3300005093Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All BlocksEnvironmentalOpen in IMG/M
3300005165Soil and rhizosphere microbial communities from Laval, Canada - mgHMCEnvironmentalOpen in IMG/M
3300005290Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1Host-AssociatedOpen in IMG/M
3300005293Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1Host-AssociatedOpen in IMG/M
3300005295Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3EnvironmentalOpen in IMG/M
3300005328Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaGHost-AssociatedOpen in IMG/M
3300005330Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaGEnvironmentalOpen in IMG/M
3300005331Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaGHost-AssociatedOpen in IMG/M
3300005333Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaGHost-AssociatedOpen in IMG/M
3300005334Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2Host-AssociatedOpen in IMG/M
3300005335Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaGHost-AssociatedOpen in IMG/M
3300005338Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2Host-AssociatedOpen in IMG/M
3300005341Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaGEnvironmentalOpen in IMG/M
3300005354Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaGHost-AssociatedOpen in IMG/M
3300005365Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaGEnvironmentalOpen in IMG/M
3300005367Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaGHost-AssociatedOpen in IMG/M
3300005440Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaGEnvironmentalOpen in IMG/M
3300005441Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaGEnvironmentalOpen in IMG/M
3300005457Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaGHost-AssociatedOpen in IMG/M
3300005526Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1EnvironmentalOpen in IMG/M
3300005543Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaGHost-AssociatedOpen in IMG/M
3300005616Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2Host-AssociatedOpen in IMG/M
3300005617Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2Host-AssociatedOpen in IMG/M
3300005618Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2Host-AssociatedOpen in IMG/M
3300005834Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2Host-AssociatedOpen in IMG/M
3300005840Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2Host-AssociatedOpen in IMG/M
3300005841Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2Host-AssociatedOpen in IMG/M
3300005842Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2Host-AssociatedOpen in IMG/M
3300005844Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2Host-AssociatedOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300006880Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3Host-AssociatedOpen in IMG/M
3300009094Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009098Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaGHost-AssociatedOpen in IMG/M
3300009156Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009553Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaGHost-AssociatedOpen in IMG/M
3300010401Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1EnvironmentalOpen in IMG/M
3300011119Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaGHost-AssociatedOpen in IMG/M
3300012902Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S169-409C-1EnvironmentalOpen in IMG/M
3300012904Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S029-104C-1EnvironmentalOpen in IMG/M
3300012905Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S013-104B-2EnvironmentalOpen in IMG/M
3300012924Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012957Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MGEnvironmentalOpen in IMG/M
3300012961Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MGEnvironmentalOpen in IMG/M
3300013096Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2EnvironmentalOpen in IMG/M
3300013296Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaGHost-AssociatedOpen in IMG/M
3300013297Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaGHost-AssociatedOpen in IMG/M
3300013306Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaGHost-AssociatedOpen in IMG/M
3300013308Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaGHost-AssociatedOpen in IMG/M
3300014325Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaGHost-AssociatedOpen in IMG/M
3300014326Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaGHost-AssociatedOpen in IMG/M
3300014969Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaGHost-AssociatedOpen in IMG/M
3300017965Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 TEnvironmentalOpen in IMG/M
3300018067Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_coexEnvironmentalOpen in IMG/M
3300018070Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_90_b1EnvironmentalOpen in IMG/M
3300018072Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2EnvironmentalOpen in IMG/M
3300018073Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1EnvironmentalOpen in IMG/M
3300018074Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b2EnvironmentalOpen in IMG/M
3300018081Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1EnvironmentalOpen in IMG/M
3300018083Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_b1EnvironmentalOpen in IMG/M
3300018476Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 TEnvironmentalOpen in IMG/M
3300019362Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)EnvironmentalOpen in IMG/M
3300021082Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_coex redoEnvironmentalOpen in IMG/M
3300021363Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3c2EnvironmentalOpen in IMG/M
3300022883Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S066-202C-4EnvironmentalOpen in IMG/M
3300025271Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with spike-in - S5 (SPAdes)EnvironmentalOpen in IMG/M
3300025290Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with spike-in - S5Host-AssociatedOpen in IMG/M
3300025315Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)Host-AssociatedOpen in IMG/M
3300025893Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025899Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025900Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025907Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025908Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025920Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025923Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025925Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025930Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)EnvironmentalOpen in IMG/M
3300025931Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025935Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025942Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025961Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025972Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026023Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026035Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026067Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026089Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026095Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026116Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026121Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026142Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026320Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm (SPAdes)EnvironmentalOpen in IMG/M
3300027907Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)Host-AssociatedOpen in IMG/M
3300028379Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300028380Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300028381Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300031538Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1EnvironmentalOpen in IMG/M
3300031908Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1EnvironmentalOpen in IMG/M
3300032000Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D3EnvironmentalOpen in IMG/M
3300032012Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3EnvironmentalOpen in IMG/M
3300032075Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3EnvironmentalOpen in IMG/M
3300032122Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D4EnvironmentalOpen in IMG/M
3300032211Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D1EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
MBSR1b_0080.000021002162886012Miscanthus RhizosphereMDQNPPITDLGPLTREIALAKVAELSASQAHEIWHAMQLITINGSLEGLPSSVVQLAKELNHFLNAWKVIAEKALVHERLSGKQKRRGFWVR
INPhiseqgaiiFebDRAFT_10502885813300000364SoilMDQYPPVNESGLVTRENSLEKVLALSVSQAHEIWHAMQLIAANGSLEGLPRPVVQIAMELNYFLNAWKVVAEKAVLHERLIGKPRRRGFWV*
JGI24036J26619_1003025333300002128Corn, Switchgrass And Miscanthus RhizosphereMDQYPPVNESGLVTRENSLEKVLALSTSQAHEIWHAMQLIAANGSLEGLPRPVVQIAMELNYFLNAWKVVAEKAVLHERLIGKPRRRGFWVX*
JGI24036J26619_1011274223300002128Corn, Switchgrass And Miscanthus RhizosphereMDQNPPVNDPRPVTRENALEKVLALSVSQAHEIWHAMQLIATNGSLEGLPRPVVQVAMELNDFLNAWKVVAEKAVIHERLIGKPRRRGFW
JGI24033J26618_104082723300002155Corn, Switchgrass And Miscanthus RhizosphereMDQYPPVNESGLVTRENSLEKVLALSISQAHEIWHAMQLIAANGSLEGLPRPVVQIAMELXYFLNAWKVVAEKAVLHERLIGKPRRRGFWV*
Ga0062590_10057823013300004157SoilVTRENALEKVLALSVSQAHEIWHAMQLIATNGSLEGLPRPVVQVAMELNDFLNAWKVVAEKAVIHERLIGKPRRRGFWVR*
Ga0063356_10246816223300004463Arabidopsis Thaliana RhizosphereMDQNPPVNDPRPVTRENALEKVLALSVSQAHEIWHAMQLIATNGSLEGLPRPVVQVAMELNDFLNAWKVVAEKAVIHERLIGKPRRRGFWVR*
Ga0062595_10033850623300004479SoilMDQYPPVNESGLVTRENSLEKVLALSISQAHEIWHAMQLIAANGSLEGLPRPVVQIAMELNYFLNAWKVVAEKAVLHERLIGKPRRRGFWV*
Ga0062595_10126184723300004479SoilMDQNPPITDLGPLTREIALAKVAELSASQAHEIWHAMQLITINGSLEGLPSSVVQLAKELNHFLNAWKVIAEKALVHERLSGKQKRRGFWVR*
Ga0062594_10285385023300005093SoilMDQNPPVNDPGPVTRENALEKVLALSVSQAHEIWHAMQLIATNGSLEGLPRPVVQVAMELNDFLNAWKVVAEKAVIHERLIGKPRRRGLWFDNHG*
Ga0066869_1005597223300005165SoilMDQNPPVNDPRPVTRENALEKVLALSVSQAHEIWHAMQLIATNGSLEGLPRPVVQVAMELNDFLNAWKVVAEKAVIHERLIGKPRRRGF*
Ga0065712_1036557613300005290Miscanthus RhizosphereNDPRPVARENALEKVLALSVSQAHEIWHAMQLIATNGSLEGLPRPVVQVAMELNDFLNAWKVVAEKAVIHERLIGKPRRRGFWVR*
Ga0065715_1026718733300005293Miscanthus RhizosphereMDQYPPVNESGLVTRENSLEKVLALSISQAHEIWHAMQLIAANGSLEGLPRPVVQIAMELNYFLNAWKVVAEKAV
Ga0065707_1044778013300005295Switchgrass RhizosphereMDQYPPVNESGLVTRENSLEKVLALSISQAHEIWHAMQLIAANGSLEGLPRPVVQIAMELNYFLNAWKVVAEKAVLHERLIGKPRRRGF
Ga0070676_1005139753300005328Miscanthus RhizosphereENALEKVLALSVSQAHEIWHAMQLITANGSLEGLPRPVVQIAMELNYFLNAWKVVAEKAVLHERLISKPRRRGFWVL*
Ga0070676_1007678423300005328Miscanthus RhizosphereMDQNLPVNESAPVTRENALEKVLALSVSQAHEIWHAMQLIATNGSLEGLPRPVVQVAMELNDFLNAWKVVAEKAVIHERLIGKPRRRGFWVR*
Ga0070676_1014784623300005328Miscanthus RhizosphereMDQYPPVNESGLVTRENSLEKVLALSTSQAHEIWHAMQLIAANGSLEGLPRPVVQIAMELNYFLNAWKVVAEKAVLHEHLIGKHRRRGFWVR*
Ga0070690_10008359323300005330Switchgrass RhizosphereMDQNPPITDLGRLTREIALAKVAELSASQAHEIWHAMQLITINGSLEGLPSSVVQLAKELNHFLNAWKVIAEKALVHERLSGKQKRRGFWVR*
Ga0070670_10023006453300005331Switchgrass RhizosphereMDQNPPVNDPGPVTRENALEKVLALSVSQAHEIWHAMQLIATNGSLEGLPRPVVQVAMELNDFLNAWKVVAEKAVIHERLIGKPRRRGFWVR*
Ga0070670_10122869813300005331Switchgrass RhizosphereMDQNHPVADLRPLAKEIALVNVAGLSAAQAHEIWHAMQLIAINESLQGLPGPVVQLAMELNHFLNAWKVVAEKALVHERLSRKQKSRGFWVR*
Ga0070677_1029470713300005333Miscanthus RhizosphereMDQNPPVNDPRPVTRENALEKVLALSVSQAHEIWHAMQLITANGSLEGLPRPVVQIAMELNYFLNAWKVVAEKAVLHERLISKPRRRGFWVL*
Ga0068869_10015139123300005334Miscanthus RhizosphereMDQNPSITDLGPLTREIALAKVAELSASQAHEIWHAMQLITINGSLEGVPSAVVQLAKELNHFLNAWKVIAEKALVHERLSGKQKRRGFWVR*
Ga0070666_1021320223300005335Switchgrass RhizosphereMDQNPLVNDPRPVTRENALEKVLALSVSQAHEIWHAMQLITANGSLEGLPRPVVQIAMELNYFLNAWKVVAEKAVLHERLISKPRRRGFWVL*
Ga0070666_1140981223300005335Switchgrass RhizosphereRENALEKVLALSVSQAHEIWHAMQLIATNGSLEGLPRPVVQVAMELNDFLNAWKVVAEKAVIHERLIGKPRRRGFWVR*
Ga0068868_10024649733300005338Miscanthus RhizosphereMDQYPPVNESGLVTRENSLEKVLALSISQAHEIWHAMQLIAANESLEGLPRPVVQIAMELNYFLNAWKVVAEKAVLHERLIGKPRRRGFWV*
Ga0070691_1069476813300005341Corn, Switchgrass And Miscanthus RhizosphereMDQYPPVNESGLVTRENSLEKVLALSISQAHEIWHAMQLIAAIGSLEGLPRPVVQIAMELNYFLNAWKVVAEKAVLHERLIGKPRRRGFWV*
Ga0070675_10075678123300005354Miscanthus RhizosphereMDQNLPVNESTPVTRENALEKVLALSVSQAHEIWHAMQLITANGSLEGLPRPVVQIAMELNYFLNAWKVVAEKAVLHERLISKPRRRGFWVL*
Ga0070688_10001187323300005365Switchgrass RhizosphereMDQYPPVNESGLVTRENSLEKVLALSTSQAHEIWHAMQLIAANGSLEGLPRPVVQIAMELNYFLNAWKVVAEKAVLHERLIGKPRRRGFWV*
Ga0070667_10108949023300005367Switchgrass RhizosphereMDQYPPVNESGLVTRENSLEKVLALSISQAHEIWHAMQLIAANGSLEGLPRPVVQIAMELNYFLNAWKVVAEKAVLHEHLIGKHRRRGFWVR*
Ga0070667_10110945913300005367Switchgrass RhizosphereMNTSPSSRKLNCWPTRTMDQNPPVNDPGPVTRENALEKVLALSVSQAHEIWHAMQLIATNGSLEGLPRPVVQVAMELNDFLNAWKVVAEKAVIHERLIGKPRRRGFWVR*
Ga0070705_10007558613300005440Corn, Switchgrass And Miscanthus RhizosphereMDQNPPITNLGRLTREIALAKVAELSASQAHEIWHAMQLITINGSLEGLPSSVVQLAKELNHFLNAWKVIAEKALVHERLSGKQKRRGFWVR*
Ga0070700_10121664213300005441Corn, Switchgrass And Miscanthus RhizosphereMDQYPPVNESGLVTRENSLEKVLALSISQAHEIWHAMQLIAANGSLEGLPRPVVQIAMELNYFLNAWKVVAEKAVLHE
Ga0070662_10011746063300005457Corn RhizosphereMDQYPPVNESGLVTRENSLEKVLALSTSQAHEIWHAMQLIAANGSLEGLPRPVVQIAMELNYFLNAWKVVAEKAVLHEHLIGKPRRRGFWVR*
Ga0073909_1031191823300005526Surface SoilMDQNPLVNDPRPVTRENALEKVLALSVSQAHEIWHAMQLIATNGSLEGLPRPVVQVAMELNDFLNAWKVVAEKAVIHERLIGKPRRRGFWVR*
Ga0070672_10074164933300005543Miscanthus RhizosphereDCWPTQTMDQYPPVNESGLVTRENSLEKVLALSISQAHEIWHAMQLIAANGSLEGLPRPVVQIAMELNYFLNAWKVVAEKAVLHERLIGKPRRRGFWV*
Ga0068852_10078545123300005616Corn RhizosphereMDQYPPVNESGLVTRENSLEKLLALSISQAHEIWHAMQLIAANGSLEGLPRPVVQIAMELNYFLNAWKVVAEKAVLHERLIGKPRRRGFWV*
Ga0068859_10033611723300005617Switchgrass RhizosphereMDQNPPITDLGPVTREIALAKVAELSASQAHEIWHAMQLITINGSLEGLPSSVVQLAKELNHFLNAWKVIAEKALVHERLSGKQKRRGFWVR*
Ga0068864_10167487913300005618Switchgrass RhizospherePPVNDPRPVTRENALEKVLALSVSQAHEIWHAMQLITANESLEGLPRPVVQVAMELNYFLNAWKVVAEKAVLHERLISKPRRRGFWVR*
Ga0068851_1087383313300005834Corn RhizosphereENSLEKVLALSISQAHEIWHAMQLIAANGSLEGLPRPVVQIAMELNYFLNAWKVVAEKAVLHERLIGKPRRRGFWV*
Ga0068870_1067454813300005840Miscanthus RhizosphereMDQYPPVNESGLVTRENSLEKVLALSVSQAHEIWHAMQLIAANGSLEGLPRPVVQIAMELNYFLNAWKVVAEKAVLHEHLIGKHRRRGFWVR*
Ga0068863_10050124713300005841Switchgrass RhizosphereRKLNCWPTRTMDQNPPVNDPGPVTRENALEKVLALSVSQAHEIWHAMQLIATNGSLEGLPRPVVQVAMELNDFLNAWKVVAEKAVIHERLIGKPRRRGFWVR*
Ga0068858_10029740543300005842Switchgrass RhizosphereEIALAKVAELSASQAHEIWHAMQLITINGSLEGLPSSVVQLAKELNHFLNAWKVIAEKALVHERLSGKQKRRGFWVR*
Ga0068862_10009490633300005844Switchgrass RhizosphereMDQNPPVNDPRPVTRENALEKVLALSTSQAHEIWHAMQLITANGSLEGLPRPVVQIAMELNYFLNAWKVVAEKAVLHERLISKPRRRGFWVL*
Ga0068862_10109513733300005844Switchgrass RhizosphereMDQNPPVNDPRPVTRENALEKVLALSVSQAHEIWHAMQLIATNGSLEGLPRPVVQVAMELNDFLNAWKVVAEKAVIHERLIGKPRRRGLWFDNHG*
Ga0075425_10271108523300006854Populus RhizosphereLSRNVDCWPTQTMDQYPPVNESGLVTRENSLEKVLALSISQAHEIWHAMQLIAANGSLEGLPRPVVQIAMELNYFLNAWKVVAEKAVLHEHLIGKHRRRGFWVR*
Ga0075429_10103127313300006880Populus RhizosphereMDQNPPVNDPRPVTRENALEKVLALSVSQAHEIWHAMQLIAANGSLEGLPRPVVQIAMELNYFLNAWKVVAEKAVLHEHLIGKPRRRGFWVR*
Ga0111539_1064242813300009094Populus RhizosphereMDQNPPVNDPRPVTRENALEKVLALSVSQAHEIWHAMQLIAANGSLEGLPRPVVQIAMELNYFLNAWKVVAEKAVLHERLIGKP
Ga0111539_1243965913300009094Populus RhizosphereVTRENALEKVLALSVSQAHEIWHAMQLITANGSLEGLPRPVVQIAMELNYFLNAWKVVAEKAVLHERLIGKPRRRGFWVR*
Ga0105245_1169060423300009098Miscanthus RhizosphereMDQNPPVNDPRPVTRENALEKVLALSVSQAHEIWHAMQLITANGSLEGLPRPVVQVAMELNDFLNAWKVVAEKAVIHERLIGKPRRRGFWVR*
Ga0111538_1105513923300009156Populus RhizosphereMDQNPPITDLGPLTREFALAKVAELSASQAHEIWHAMQLITINGSLEGLPSSVVQLAKELNHFLNAWKVIAEKALVHERLSGKQKRRGFWVR*
Ga0105249_1087655813300009553Switchgrass RhizosphereMDQNFPVTELMPMTRESALAKVLALSASQAHEIWCVMQLIATNKSLERLPPPLVQIATDLNRFLMAWKVVSEKALLHERLGGEGKRRGFWVR*
Ga0105249_1091651933300009553Switchgrass RhizosphereMKRENALEKVLALSVSQAHEIWHAMQLITANGSLEGLPRPVVQIAMELNYFLNAWKVVAEKAVLHERLISKPRRRGFWVL*
Ga0134121_10007108123300010401Terrestrial SoilMDQYPPVNESGLVTRENSLEKVLALSISQAHEIWHAMQLIAANGSLEGLPRPVVQIAMELNSFLNAWKVVAEKAVLHERLIGKPRRRGFWV*
Ga0105246_1215372913300011119Miscanthus RhizosphereLAKEIALAKVAGLSAAQAHEIWHAMHLLAINESLQGLPGPVVQLAMELNHFLNAWKVVAEKALVHERLSRKQKSRGFWVR*
Ga0157291_1041377123300012902SoilMDQNPPVNDPRPVARENALEKVLALSVSQAHEIWHAMQLIATNGSLEGLPRPVVQVAMELNDFLNAWKVVAEKAVIHERLIGKPRRRGFWVR*
Ga0157282_1012701523300012904SoilMDQNPPVNDPRPVTRENALEKVLALSVSQAHEIWHAMQLIATNGSLEGLPRPVVQVAMELNDFLNAWKVVAEKAVLHERLISKPRRRGFWVL*
Ga0157296_1003714923300012905SoilMDQYPPVNESGLVTRENSLEKVLALSTSQAHEIWHAMQLITANGSLEGLPRPVVQIAMELNYFLNAWKVVAEKAVLHERLISKPRRRGFWVL*
Ga0137413_1018286633300012924Vadose Zone SoilMNQNPPVTGIRALARKRALEKVLELSGPQAHEIWRAMQLIATNASLEGLPGTVVELAMDLNHFLEAWKVVAEKALVHERLTGKQKRRGLWVR*
Ga0164303_1129825923300012957SoilMDQNPLVNDPRPVTRENALEKVLALSVSQAHEIWHAMQLIATNGSLEGLPRPVVQVAMELNDFLNAWKVVAEKAVLHER
Ga0164302_1142534623300012961SoilMDQNPPVNDPRPVTRENALEKVLALSVSQAHEIWHAMQLIATNGSLEGLPRPVVQVAMELNDFLNAWKVVAEKAVIHERLIGKPRRRGFWIR*
Ga0157307_107300923300013096SoilMDQNPPVNDPGPVTRENALEEVLALSVSQAHEIWHAMQLIATNGSLEGLPRPVVQIAMELNDFLNAWKVVAEKAVIHERLIGKPRRRGLWFDNHG*
Ga0157374_1023905533300013296Miscanthus RhizosphereMDQNPPVNDPGPVTRENALEKVLALSVSQAHEIWHAMQLITANGSLEGLPRPVVQIAMELNYFLNAWKVVAEKAVLHERLISKPRRRGFWVR*
Ga0157374_1285919513300013296Miscanthus RhizosphereMDQNFPITELKPMTREIALAKVLALSTSQAHEIWCAMQLIATNKSLERLPPPLVQIATDLNRFLMAWKVVSEKALLHERLGGEGKRRGFWVR*
Ga0157378_1044074323300013297Miscanthus RhizosphereMDQNFPITELKPMTREIALAKVLALSASQAHEIWCAMQLIATNKSLERLPPPLVQIATDLNRFLMALKVVSEKALLHERLGGEGKRRGFWVR*
Ga0157378_1055680113300013297Miscanthus RhizosphereVNESGLVTRENSLEKVLALSTSQAHEIWHAMQLITANGSLEGLPRPVVQIAMELNYFLNAWKVVAEKAVLHERLISKPRRRGFWVL*
Ga0163162_1097601623300013306Switchgrass RhizosphereMDQNLPVNESTPVTRENALEKVLALSVSQAHEIWHAMQLIATNGSLEGLPRPVVQVAMELNDFLNAWKVVAEKAVIHERLIGKPRRRGFWVR*
Ga0157375_1051124023300013308Miscanthus RhizosphereMDQNFPITELKPMTREIALAKVLALSASQAHEIWCAMQLIATNKSLERLPPPLVQIATDLNRFLMAWKVVSEKALLHERLGGEGKRRGFWVR*
Ga0163163_1219797123300014325Switchgrass RhizosphereMDQNLPVNESTPVTRENALEKVLALSVSQAHEIWHAMQLITANGSLEGLPRPVVQIAMELNYFLNAWKVVAEKAVLHERLIGKPRRRGFWVR*
Ga0157380_1027713113300014326Switchgrass RhizosphereMDQYPPVNESGLVTRENSLEKVLALSTSQAHEIWHAMQLIAANGSLEGLPRPVVQIAMELNSFLNAWKVVAEKALLHERLIGKPRRRGFWV*
Ga0157380_1035512943300014326Switchgrass RhizosphereMDQNPSITDLGPLTREIALAKVAELSASQAHEIWHAMQLITINGSLEGLPSSVVQLAKELNHFLNAWKVIAEKALVHERLSGKQKRRGFWVR*
Ga0157376_1034881623300014969Miscanthus RhizosphereMDQYPPVNESGLVTRENSLEKVLALSISQAHEIWHAMQLIAANESLEGLPRPVVQIAMELNYFLNAWKVVAEKAVLHEHLIGKHRRRGFWVR*
Ga0190266_1010127713300017965SoilSYSRALSAMTLQVNESGLVTRENSLEKVLALSVSQAHEIWHAMQLIATNGSLEGLPRPVVQIAMELNDFLNAWKVVAEKAVIHERLIGKPRRRGFWVR
Ga0184611_117086323300018067Groundwater SedimentMDQNPPVNDPRPVTRENALEKVLALSVSQAHEIWHAMQLIATNGSLEGLPRPVVQVAMELNDFLNAWKVVAEKAVIHERLIG
Ga0184631_1046846413300018070Groundwater SedimentMDQNPPVNDPRPVTRENALEKVLALSVSQAHEIWHAMQLITANESLEGLPRPVVQIAMELNDFLNAWKVVAEKAVLHERLISKPRRRGFWVR
Ga0184635_1011668813300018072Groundwater SedimentMDQNLSVNESTPVTGENALEKVLALSVSQAHEIWHAMQLITANGSLEGLPRPVVQIAMELNYFLNAWKVVAEKAVLHERLISKPRRRGFWVL
Ga0184635_1014550813300018072Groundwater SedimentMDQNFPVTELMPMTRESALAKVLALSASQAHEIWCVMQLIATNKSLEGLRPPLVQIAMDLNRFLMAWKVVSEKALLHERLGGEGKRRGFWVR
Ga0184624_1000759553300018073Groundwater SedimentMDQNPPVNDPGPVTRENALEKVLALSVSQAHEIWHAMQLIATNGSLEGLPRPVVQVAMELNDFLNAWKVVAEKAVIHERLIGKPRRRGLWFDNHG
Ga0184640_1004659713300018074Groundwater SedimentMDQNPPVNDPGPVTRENALEKVLALSVSQAHEIWHAMQLITANGSLEGLPRPVVQIAMELNYFLNAWKVVAEKAVLHERLISKPRRRGFWVL
Ga0184640_1028018533300018074Groundwater SedimentPVTRENALEKVLALSVSQAHEIWHAMQLIATNGSLEGLPRPVVQVAMELNDFLNAWKVVAEKAVIHERLIGKPRRRGLWFDNHG
Ga0184625_1039744623300018081Groundwater SedimentMDQNPPVNDPRPVTRENALEKVLALSVSQAHEIWHAMQLIATNGSLEGLPRPVVQVAMELNDFLNAWKVVAEKAVIHERLIGKPRRRGFWVR
Ga0184628_1034891623300018083Groundwater SedimentMDQNLSVNESTPVTGENALEKVLALSVSQAHEIWHAMQLITANGSLEGLPRPVVQIAMELNYFLNAWKVVAEKAVLHERLISKPRRRGFWVR
Ga0190274_1175808123300018476SoilMNQNLPVNESAPVTRENALEKVLALSVSQAHEIWHAMQLITANGSLEGLPRPVVQIAMELNYFLNAWKVVAEKAVLHERLIGKPRRRGFWVR
Ga0190274_1200526723300018476SoilMSTLLSRNLDCESKRTMDQNPQVTDLEPLTREIALSTVAGLSGSQAYEIWRAMQLIAINESLEGLPSAAVQLAMDLNRFLNAWKVVAEKALVHERLVGKRKRRGFWLR
Ga0190274_1255403813300018476SoilMDQNPPVNDPRPVTRENALEKVLALSVSQAHEIWHAMQLIATNGSLEGLPRPVVQVAMELNDFLNAWKVVAEKAVIHERLIGKPRRRG
Ga0173479_1004446623300019362SoilMDQNPPVNDPGPVTRENALEKVLALSVSQAHEIWHAMQLIATNGSLEGLPRPVVQVAMELNDFLNAWKVVAEKAVIHERLIGKPRRRGFWVR
Ga0210380_1006598033300021082Groundwater SedimentMDQNFPVTELMPMTRESALAKVLALSASQAHEIWCVMQLIATNKSLEGLPPPLVQIATDLNRFLMAWKVVSEKALLHERLGGEGKRRGFWVR
Ga0210380_1006722543300021082Groundwater SedimentMDQNLSVNESTPVTRENALEKVLALSVSQAHEIWHAMQLITANGSLEGLPRPVVQIAMELNYFLNAWKVVAEKAVLHERLISKPRRRGFWVR
Ga0193699_1046969423300021363SoilMDQNPPVTDLRPLTREIALAKVVELSASQAHEIWYAMQVIAINGSLEGFPGPVVQLAMDLNHFLNAWKVIAEKAFVHERLTGKQKRRGL
Ga0247786_105312623300022883SoilMDQNPPVNDPRPVTRENALEKVLALSVSQAHEIWHAMQLIATNGSLEGLPRPVVQVAMELNDFLNAWKVVAEKAVIHERLIGKPRRRGLWFDNHG
Ga0207666_101509123300025271Corn, Switchgrass And Miscanthus RhizosphereMDQYPPVNESGLVTRENSLEKVLALSISQAHEIWHAMQLIAANGSLEGLPRPVVQIAMELNYFLNAWKVVAEKAVLHERLIGKPRRRGFWV
Ga0207673_103237423300025290Corn, Switchgrass And Miscanthus RhizosphereMDQYPPVNESGLVTRENSLEKVLALSTSQAHEIWHAMQLIAANGSLEGLPRPVVQIAMELNSFLNAWKVVAEKAVIHERLIGKPRRRGFWVR
Ga0207697_1000677273300025315Corn, Switchgrass And Miscanthus RhizosphereMDQYPPVNESGLVTRENSLEKVLALSTSQAHEIWHAMQLIAANGSLEGLPRPVVQIAMELNYFLNAWKVVAEKAVLHEHLIGKHRRRGFWVR
Ga0207697_1026051623300025315Corn, Switchgrass And Miscanthus RhizosphereMDQNPPITDLGRLTREIALAKVAELSASQAHEIWHAMQLITINGSLEGLPSSVVQLAKELNHFLNAWKVIAEKALVHERLSGKQKRRGFWVR
Ga0207682_1044406423300025893Miscanthus RhizosphereMDQNPPVNDPRPVTRENALEKVLALSVSQAHEIWHAMQLITANGSLEGLPRPVVQIAMELNYFLNAWKVVAEKAVLHERLISKPRRRGFWVR
Ga0207642_1002678063300025899Miscanthus RhizosphereVTRENSLEKVLALSISQAHEIWHAMQLIAANGSLEGLPRPVVQIAMELNYFLNAWKVVAEKAVLHERLIGKPRRRGFWV
Ga0207710_1026724313300025900Switchgrass RhizosphereLGRSSQIRPSNTSTLPLSRNVDCWPTQTMDQYPPVNESGLVTRENSLEKVLALSISQAHEIWHAMQLIAANESLEGLPRPVVQIAMELNYFLNAWKVVAEKAVLHERLIGKPRRRGFWV
Ga0207645_1012861023300025907Miscanthus RhizosphereMDQYPPVNESGLVTRENSLEKVLALSTSQAHEIWHAMQLIAANGSLEGLPRPVVQIAMELNYFLNAWKVVAEKAVLHERLIGKPRRRGFWV
Ga0207645_1089707413300025907Miscanthus RhizospherePPVNDPGPETRENALEKVLALSVSQAHEIWHAMQLITANGSLEGLPRPVVQIAMELNYFLNAWKVVAEKAVLHERLISKPRRRGFWVL
Ga0207643_10002104113300025908Miscanthus RhizosphereMDQYPPVNESGLVTRENSLEKVLALSVSQAHEIWHAMQLIAANGSLEGLPRPVVQIAMELNYFLNAWKVVAEKAVLHEHLIGKPRRRGFWVR
Ga0207649_1054650423300025920Corn RhizosphereMDQNLPVNESTPVTRENALEKVLALSVSQAHEIWHAMQLITINGSLEGLPSSVVQLAKELNHFLNAWKVIAEKALVHERLSGKQKRRGFWVR
Ga0207681_1025686723300025923Switchgrass RhizosphereMDQYPPVNESGLVTRENSLEKVLALSISQAHEIWHAMQLIAANGSLEGLPRPVVQIAMELNYFLNAWKVVAEKAVLHEHLIGKHRRRGFWVR
Ga0207650_1021592323300025925Switchgrass RhizosphereMDQNLPVNESTPVTRENALEKVLALSVSQAHEIWHAMQLIATNGSLEGLPRPVVQVAMELNDFLNAWKVVAEKAVIHERLI
Ga0207701_1008110863300025930Corn, Switchgrass And Miscanthus RhizosphereNDPRPVTRENALEKVLALSVSQAHEIWHAMQLITANGSLEGLPRPVVQIAMELNYFLNAWKVVAEKAVLHERLISKPRRRGFWVL
Ga0207701_1038182813300025930Corn, Switchgrass And Miscanthus RhizosphereNDPRPVTRENALEKVLALSVSQAHEIWHAMQLIATNGSLEGLPRPVVQVAMELNDFLNAWKVVAEKAVIHERLIGKPRRRGFWVR
Ga0207644_1085334223300025931Switchgrass RhizosphereMDQYPPVNESGLVTRENSLEKVLALSISQAHEIWHAMQLIAANGSLEGLPRPVVQIAMELNYFLNAWKVVAEKAVLHERLIGKPR
Ga0207709_1018022213300025935Miscanthus RhizosphereNPPITDLGPVTREIALAKVAELSASQAHEIWHAMQLITINGSLEGLPSAVVQLAKELNHFLNAWKVIAEKALVHERLSGKQKRRGFWVR
Ga0207709_1084186723300025935Miscanthus RhizosphereTLPLSRNVDCWPTQTMDQYPPVNESGLVTRENSLEKVLALSTSQAHEIWHAMQLIAANGSLEGLPRPVVQIAMELNYFLNAWKVVAEKAVLHERLIGKPRRRGFWV
Ga0207689_1044475933300025942Miscanthus RhizosphereMDQNPSITDLGPLTREIALAKVAELSASQAHEIWHAMQLITINGSLEGVPSAVVQLAKELNHFLNAWKVIAEKALVHERLSGKQKRRGFW
Ga0207712_1080450713300025961Switchgrass RhizosphereLEKVLALSVSQAHEIWHAMQLITANGSLEGLPRPVVQIAMELNYFLNAWKVVAEKAVLHERLISKPRRRGFWVL
Ga0207668_1194512213300025972Switchgrass RhizosphereVARENALEKVLALSVSQAHEIWHAMQLIATNGSLEGLPRPVVQVAMELNDFLNAWKVVAEKAVIHERLIGKPRRRGFWVR
Ga0207677_1021686913300026023Miscanthus RhizosphereSRKLNCWPTRTMDQNPPVNDPGPVTRENALEKVLALSVSQAHEIWHAMQLIATNGSLEGLPRPVVQVAMELNDFLNAWKVVAEKAVIHERLIGKPRRRGFWVR
Ga0207703_1019232813300026035Switchgrass RhizosphereEIALAKVAELSASQAHEIWHAMQLITINGSLEGLPSSVVQLAKELNHFLNAWKVIAEKALVHERLSGKQKRRGFWVR
Ga0207678_1080355923300026067Corn RhizosphereMDQNPPITDLGPLTREIALAKVAELSASQAHEIWHAMQLITINGSLEGLPSAVVQLAKELNHFLNAWKVVAEKAVLHERLIGKPRRRGFWV
Ga0207648_1041189623300026089Miscanthus RhizosphereMDQNPPVNDPRPVTRENALEKVLALSVSQAHEIWHAMQLITANGSLEGLPRPVVQIAMELNYFLNAWKVVAEKAVLHERLISKPRRRGFWVL
Ga0207676_1149109523300026095Switchgrass RhizosphereRTMDQNPPVNDPRPVTRENALEKVLALSVSQAHEIWHAMQLITANGSLEGLPRPVVQIAMELNYFLNAWKVVAEKAVLHERLISKPRRRGFWVR
Ga0207674_1021453853300026116Corn RhizosphereMDQNPPVNDPGPVTRENALEKVLALSVSQAHEIWHAMQLIAANGSLEGLPRPVVQIAMELNYFLNAWKVVAEKAVLHEHLIGKHRRRGFWVR
Ga0207683_1026180013300026121Miscanthus RhizosphereMDQNPPVNDPGPVTRENALEKVLALSVSQAHEIWHAMQLIATNGSLEGLPRPVVQVAMELNDFLNAWKVVAEKAVIH
Ga0207683_1036758513300026121Miscanthus RhizosphereGRTMDQNPPITDLGPLTREIALAKVAELSASQAHEIWHAMQLITINGSLEGLPSSVVQLAKELNHFLNAWKVIAEKALVHERLSGKQKRRGFWVR
Ga0207698_1119124533300026142Corn RhizosphereSRNVDCWPTQTMDQYPPVNESGLVTRENSLEKLLALSISQAHEIWHAMQLIAANGSLEGLPRPVVQIAMELNYFLNAWKVVAEKAVLHERLIGKPRRRGFWV
Ga0209131_105675843300026320Grasslands SoilMNQNPPVTGIRALARKRALEKVLELSGPQAHEIWRAMQLIATNASLEGLPGTVVELAMDLNHFLEAWKVVAEKALVHERLTGKQKRRGLWVR
Ga0207428_1066967623300027907Populus RhizosphereMDQYPPVNESGLVTRENSLEKVLALSISQAHEIWHAMQLIAANESLEGLPRPVVQIAMELNYFLNAWKVVAEKAVLHERLIGKPRRRGFWV
Ga0268266_1096824513300028379Switchgrass RhizospherePPITDLGPLTREIALAKVAELSASQAHEIWHAMQLITINGSLEGLPSSVVQLAKELNHFLNAWKVIAEKALVHERLSGKQKRRGFWVR
Ga0268265_1020904133300028380Switchgrass RhizosphereMDQNPPVNDPRPVTRENALEKVLALSTSQAHEIWHAMQLITANGSLEGLPRPVVQIAMELNYFLNAWKVVAEKAVLHERLISKPRRRGFWVL
Ga0268264_1092266223300028381Switchgrass RhizosphereIALAKVAELSASQAHEIWHAMQLITINGSLEGLPSSVVQLAKELNHFLNAWKVIAEKALVHERLSGKQKRRGFWVR
Ga0310888_1039958823300031538SoilLNCWPTRTMDQNPPVNDPRPVTRENALEKVLALSVSQAHEIWHAMQLIATNGSLEGLPRPVVQVAMELNDFLNAWKVVAEKAVIHERLIGKPRRRGFWVR
Ga0310900_1141139413300031908SoilPITDLGPLTREIALAKVAELSASQAHEIWHAMQLITINGSLEGLPSSVVQLAKELNHFLNAWKVIAEKALVHERLSGKQKRRGFWVR
Ga0310903_1070805213300032000SoilNSLEKVLALSISQAHEIWHAMQLIAANGSLEGLPRPVVQIAMELNYFLNAWKVVAEKAVLHERLIGKPRRRGFWV
Ga0310902_1056003623300032012SoilMDQNPPITDLRRLTREIALAKVAELSASQAHEIWHAMQLITINGSLEGLPSSVVQLAKELNHFLNAWKVIAEKALVHERLSGKQKRRGFWVR
Ga0310890_1029116423300032075SoilMDQNLPVNESTPVTRENALEKVLALSVSQAHEIWHAMQLIATNGSLEGLPRPVVQVAMELNDFLNAWKVVAEKAVIHERLIGKPRRRGLWFDNHG
Ga0310895_1038123613300032122SoilLAKVAELSASQAHEIWHAMQLITINGSLEGLPSSVVQLAKELNHFLNAWKVIAEKALVHERLSGKQKRRGFWVR
Ga0310896_1073309323300032211SoilPVNDPRPVTRENALEKVLALSVSQAHEIWHAMQLITANGSLEGLPRPVVQIAMELNYFLNAWKVVAEKAVLHERLIGKPRRRGFWV


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.