Metagenome / Metatranscriptome Family F061520

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F061520
Family Type	Metagenome / Metatranscriptome
Number of Sequences	131
Average Sequence Length	43 residues
Representative Sequence	MPIVQGQTTLFKANILSGLENFAVGTPYTYKIALYNANANLNN
Number of Associated Samples	104
Number of Associated Scaffolds	131

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	74.81 %
% of genes near scaffold ends (potentially truncated)	100.00 %
% of genes from short scaffolds (< 2000 bps)	90.08 %
Associated GOLD sequencing projects	94
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.30

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (42.748 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater (46.565 % of family members)
Environment Ontology (ENVO)	Unclassified (80.153 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (83.969 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 9.86% β-sheet: 0.00% Coil/Unstructured: 90.14%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.30
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.30
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 131 Family Scaffolds
PF01541	GIY-YIG	0.76

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	57.25 %
Unclassified	root	N/A	42.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.75 %
cellular organisms	root	All Organisms → cellular organisms	41.22 %
Viruses	superkingdom	All Organisms → Viruses	16.03 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.75 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	38.93 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	8.40 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	7.63 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	2.29 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.75 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	35.11 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	8.40 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	7.63 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	2.29 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.75 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	35.11 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	8.40 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	7.63 %
unclassified Euryarchaeota	no rank	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota	2.29 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.75 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	35.11 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	8.40 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	7.63 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	2.29 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.75 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	35.11 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	8.40 %
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	7.63 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	2.29 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.75 %
unclassified Actinomycetales	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales → unclassified Actinomycetales	35.11 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	8.40 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	7.63 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	2.29 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.75 %
Actinomycetales bacterium mxb001	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales → unclassified Actinomycetales → Actinomycetales bacterium mxb001	35.11 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	8.40 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	7.63 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	2.29 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.76 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002307\|JGI24890J29729_1021909	Not Available	1504	Open in IMG/M
3300003375\|JGI26470J50227_1026782	Not Available	1188	Open in IMG/M
3300003375\|JGI26470J50227_1034627	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales → unclassified Actinomycetales → Actinomycetales bacterium mxb001	977	Open in IMG/M
3300003375\|JGI26470J50227_1068194	Not Available	574	Open in IMG/M
3300003797\|Ga0007846_1013407	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales → unclassified Actinomycetales → Actinomycetales bacterium mxb001	759	Open in IMG/M
3300003804\|Ga0007817_1000684	All Organisms → cellular organisms → Bacteria	2861	Open in IMG/M
3300003814\|Ga0007877_1001852	All Organisms → cellular organisms → Bacteria	3667	Open in IMG/M
3300003814\|Ga0007877_1003233	All Organisms → cellular organisms → Bacteria	2524	Open in IMG/M
3300003814\|Ga0007877_1019536	Not Available	750	Open in IMG/M
3300003815\|Ga0007856_1006528	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales → unclassified Actinomycetales → Actinomycetales bacterium mxb001	833	Open in IMG/M
3300003815\|Ga0007856_1007241	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales → unclassified Actinomycetales → Actinomycetales bacterium mxb001	781	Open in IMG/M
3300003827\|Ga0007880_1002379	Not Available	2500	Open in IMG/M
3300003827\|Ga0007880_1024920	Not Available	528	Open in IMG/M
3300004692\|Ga0065171_1078929	Not Available	518	Open in IMG/M
3300004694\|Ga0065170_1051711	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales → unclassified Actinomycetales → Actinomycetales bacterium mxb001	551	Open in IMG/M
3300004804\|Ga0007796_10157617	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales → unclassified Actinomycetales → Actinomycetales bacterium mxb001	679	Open in IMG/M
3300004805\|Ga0007792_10164310	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales → unclassified Actinomycetales → Actinomycetales bacterium mxb001	682	Open in IMG/M
3300004807\|Ga0007809_10107573	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales → unclassified Actinomycetales → Actinomycetales bacterium mxb001	845	Open in IMG/M
3300006071\|Ga0007876_1098548	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales → unclassified Actinomycetales → Actinomycetales bacterium mxb001	756	Open in IMG/M
3300006072\|Ga0007881_1070745	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales → unclassified Actinomycetales → Actinomycetales bacterium mxb001	889	Open in IMG/M
3300006072\|Ga0007881_1185876	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales → unclassified Actinomycetales → Actinomycetales bacterium mxb001	500	Open in IMG/M
3300006100\|Ga0007806_1006665	Not Available	2892	Open in IMG/M
3300006101\|Ga0007810_1110980	Not Available	522	Open in IMG/M
3300006103\|Ga0007813_1055527	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales → unclassified Actinomycetales → Actinomycetales bacterium mxb001	811	Open in IMG/M
3300006104\|Ga0007882_10219265	Not Available	639	Open in IMG/M
3300006105\|Ga0007819_1014240	Not Available	1978	Open in IMG/M
3300006112\|Ga0007857_1005550	Not Available	3064	Open in IMG/M
3300006113\|Ga0007858_1062833	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	783	Open in IMG/M
3300006127\|Ga0007805_1037148	Not Available	1093	Open in IMG/M
3300006128\|Ga0007828_1032076	All Organisms → cellular organisms → Bacteria → Proteobacteria	1098	Open in IMG/M
3300006128\|Ga0007828_1091472	Not Available	630	Open in IMG/M
3300006129\|Ga0007834_1130981	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales → unclassified Actinomycetales → Actinomycetales bacterium mxb001	514	Open in IMG/M
3300008450\|Ga0114880_1158969	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales → unclassified Actinomycetales → Actinomycetales bacterium mxb001	804	Open in IMG/M
3300009068\|Ga0114973_10706846	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales → unclassified Actinomycetales → Actinomycetales bacterium mxb001	513	Open in IMG/M
3300009151\|Ga0114962_10051382	Not Available	2712	Open in IMG/M
3300009151\|Ga0114962_10357509	Not Available	800	Open in IMG/M
3300009152\|Ga0114980_10268871	Not Available	993	Open in IMG/M
3300009154\|Ga0114963_10482855	Not Available	661	Open in IMG/M
3300009154\|Ga0114963_10540732	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales → unclassified Actinomycetales → Actinomycetales bacterium mxb001	616	Open in IMG/M
3300009159\|Ga0114978_10125736	Not Available	1670	Open in IMG/M
3300009164\|Ga0114975_10189862	Not Available	1164	Open in IMG/M
3300009165\|Ga0105102_10210920	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	975	Open in IMG/M
3300009168\|Ga0105104_10172770	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1172	Open in IMG/M
3300009180\|Ga0114979_10214349	Not Available	1162	Open in IMG/M
3300009184\|Ga0114976_10293504	Not Available	871	Open in IMG/M
3300010157\|Ga0114964_10148996	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales → unclassified Actinomycetales → Actinomycetales bacterium mxb001	1138	Open in IMG/M
3300010158\|Ga0114960_10229379	Not Available	957	Open in IMG/M
3300010885\|Ga0133913_10761120	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2528	Open in IMG/M
3300010885\|Ga0133913_11249889	All Organisms → Viruses → Predicted Viral	1901	Open in IMG/M
3300010885\|Ga0133913_12531901	Not Available	1249	Open in IMG/M
3300010885\|Ga0133913_13042180	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	1116	Open in IMG/M
3300010885\|Ga0133913_13287177	Not Available	1064	Open in IMG/M
3300012695\|Ga0157577_1037680	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales → unclassified Actinomycetales → Actinomycetales bacterium mxb001	802	Open in IMG/M
3300013093\|Ga0164296_1116697	Not Available	1098	Open in IMG/M
3300013094\|Ga0164297_10283002	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	633	Open in IMG/M
3300014811\|Ga0119960_1100183	Not Available	518	Open in IMG/M
3300015050\|Ga0181338_1030504	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales → unclassified Actinomycetales → Actinomycetales bacterium mxb001	821	Open in IMG/M
3300017716\|Ga0181350_1141148	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales → unclassified Actinomycetales → Actinomycetales bacterium mxb001	567	Open in IMG/M
3300017722\|Ga0181347_1107055	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales → unclassified Actinomycetales → Actinomycetales bacterium mxb001	793	Open in IMG/M
3300017766\|Ga0181343_1062832	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	1079	Open in IMG/M
3300017774\|Ga0181358_1138907	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales → unclassified Actinomycetales → Actinomycetales bacterium mxb001	839	Open in IMG/M
3300017784\|Ga0181348_1309962	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales → unclassified Actinomycetales → Actinomycetales bacterium mxb001	526	Open in IMG/M
3300020157\|Ga0194049_1047092	All Organisms → Viruses → Predicted Viral	1124	Open in IMG/M
3300020686\|Ga0214194_107523	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1000	Open in IMG/M
3300020695\|Ga0214190_1005250	All Organisms → Viruses → Predicted Viral	1729	Open in IMG/M
3300020716\|Ga0214207_1012723	Not Available	1083	Open in IMG/M
3300020723\|Ga0214249_1018848	Not Available	1196	Open in IMG/M
3300020731\|Ga0214170_1066125	Not Available	502	Open in IMG/M
3300021125\|Ga0214211_1017312	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales → unclassified Actinomycetales → Actinomycetales bacterium mxb001	699	Open in IMG/M
3300021126\|Ga0214187_1034156	Not Available	532	Open in IMG/M
3300021135\|Ga0214247_1003681	Not Available	4562	Open in IMG/M
3300021137\|Ga0214165_1055325	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales → unclassified Actinomycetales → Actinomycetales bacterium mxb001	844	Open in IMG/M
3300021354\|Ga0194047_10093786	All Organisms → Viruses → Predicted Viral	1286	Open in IMG/M
3300021354\|Ga0194047_10161278	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales → unclassified Actinomycetales → Actinomycetales bacterium mxb001	910	Open in IMG/M
3300021963\|Ga0222712_10794792	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	522	Open in IMG/M
3300022179\|Ga0181353_1024449	All Organisms → Viruses → Predicted Viral	1596	Open in IMG/M
3300024343\|Ga0244777_10490126	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales → unclassified Actinomycetales → Actinomycetales bacterium mxb001	756	Open in IMG/M
3300025353\|Ga0208255_109064	Not Available	937	Open in IMG/M
3300025357\|Ga0208383_1042972	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales → unclassified Actinomycetales → Actinomycetales bacterium mxb001	503	Open in IMG/M
3300025369\|Ga0208382_1008729	Not Available	1697	Open in IMG/M
3300025369\|Ga0208382_1011566	Not Available	1363	Open in IMG/M
3300025378\|Ga0207960_1050433	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	562	Open in IMG/M
3300025379\|Ga0208738_1007955	Not Available	1883	Open in IMG/M
3300025379\|Ga0208738_1011591	Not Available	1501	Open in IMG/M
3300025379\|Ga0208738_1043148	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	661	Open in IMG/M
3300025381\|Ga0208871_1020249	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales → unclassified Actinomycetales → Actinomycetales bacterium mxb001	1005	Open in IMG/M
3300025387\|Ga0207959_1029156	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales → unclassified Actinomycetales → Actinomycetales bacterium mxb001	883	Open in IMG/M
3300025389\|Ga0208257_1033148	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales → unclassified Actinomycetales → Actinomycetales bacterium mxb001	757	Open in IMG/M
3300025389\|Ga0208257_1040887	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales → unclassified Actinomycetales → Actinomycetales bacterium mxb001	665	Open in IMG/M
3300025390\|Ga0208743_1025898	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales → unclassified Actinomycetales → Actinomycetales bacterium mxb001	858	Open in IMG/M
3300025392\|Ga0208380_1042945	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales → unclassified Actinomycetales → Actinomycetales bacterium mxb001	675	Open in IMG/M
3300025395\|Ga0208109_1030345	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales → unclassified Actinomycetales → Actinomycetales bacterium mxb001	762	Open in IMG/M
3300025401\|Ga0207955_1038203	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales → unclassified Actinomycetales → Actinomycetales bacterium mxb001	813	Open in IMG/M
3300025403\|Ga0208745_1017029	All Organisms → Viruses → Predicted Viral	1173	Open in IMG/M
3300025403\|Ga0208745_1017115	Not Available	1169	Open in IMG/M
3300025418\|Ga0208253_1045642	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales → unclassified Actinomycetales → Actinomycetales bacterium mxb001	757	Open in IMG/M
3300025424\|Ga0208617_1003386	Not Available	3837	Open in IMG/M
3300025429\|Ga0208500_1036183	Not Available	597	Open in IMG/M
3300025435\|Ga0208618_1023421	Not Available	1209	Open in IMG/M
3300025467\|Ga0208260_1032286	Not Available	1117	Open in IMG/M
3300025467\|Ga0208260_1045290	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales → unclassified Actinomycetales → Actinomycetales bacterium mxb001	921	Open in IMG/M
3300025470\|Ga0208389_1042977	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales → unclassified Actinomycetales → Actinomycetales bacterium mxb001	877	Open in IMG/M
3300025648\|Ga0208507_1076392	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales → unclassified Actinomycetales → Actinomycetales bacterium mxb001	1037	Open in IMG/M
3300025648\|Ga0208507_1143752	Not Available	662	Open in IMG/M
3300025773\|Ga0208104_1001209	Not Available	4423	Open in IMG/M
3300025777\|Ga0208110_1006853	All Organisms → cellular organisms → Bacteria	1518	Open in IMG/M
3300025783\|Ga0208258_1010551	Not Available	1487	Open in IMG/M
3300025783\|Ga0208258_1015969	Not Available	1159	Open in IMG/M
3300025838\|Ga0208872_1097319	Not Available	1104	Open in IMG/M
3300027710\|Ga0209599_10057605	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1023	Open in IMG/M
3300027736\|Ga0209190_1015664	Not Available	4364	Open in IMG/M
3300027736\|Ga0209190_1133013	All Organisms → Viruses → Predicted Viral	1100	Open in IMG/M
3300027749\|Ga0209084_1080049	Not Available	1481	Open in IMG/M
3300027893\|Ga0209636_11142443	Not Available	556	Open in IMG/M
3300027896\|Ga0209777_10388457	Not Available	1053	Open in IMG/M
3300027896\|Ga0209777_10763012	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales → unclassified Actinomycetales → Actinomycetales bacterium mxb001	682	Open in IMG/M
3300027896\|Ga0209777_11143684	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	523	Open in IMG/M
3300027971\|Ga0209401_1092500	All Organisms → Viruses → Predicted Viral	1264	Open in IMG/M
3300028027\|Ga0247722_10248690	Not Available	617	Open in IMG/M
3300028394\|Ga0304730_1236879	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales → unclassified Actinomycetales → Actinomycetales bacterium mxb001	666	Open in IMG/M
3300031578\|Ga0307376_10477598	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales → unclassified Actinomycetales → Actinomycetales bacterium mxb001	809	Open in IMG/M
3300031707\|Ga0315291_10596484	All Organisms → Viruses → Predicted Viral	1003	Open in IMG/M
3300031963\|Ga0315901_10219529	Not Available	1631	Open in IMG/M
3300032018\|Ga0315272_10645580	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales → unclassified Actinomycetales → Actinomycetales bacterium mxb001	536	Open in IMG/M
3300032117\|Ga0316218_1130893	Not Available	954	Open in IMG/M
3300032118\|Ga0315277_10523790	All Organisms → Viruses → Predicted Viral	1182	Open in IMG/M
3300032562\|Ga0316226_1347146	Not Available	555	Open in IMG/M
3300032605\|Ga0316232_1020468	All Organisms → Viruses → Predicted Viral	3883	Open in IMG/M
3300032605\|Ga0316232_1294448	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales → unclassified Actinomycetales → Actinomycetales bacterium mxb001	610	Open in IMG/M
3300034104\|Ga0335031_0859997	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales → unclassified Actinomycetales → Actinomycetales bacterium mxb001	501	Open in IMG/M
3300034116\|Ga0335068_0223912	Not Available	974	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	97.71%
Terrestrial	Environmental → Terrestrial	2.29%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	95.42%
Marine	Environmental → Aquatic → Marine	2.29%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface	1.53%
Soil	Environmental → Terrestrial → Soil	0.76%

Habitat	Taxonomy	Distribution
Lentic	Environmental → Aquatic → Freshwater → Lentic	66.41%
Lake	Environmental → Aquatic → Freshwater → Lake	25.95%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.53%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	1.53%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified	1.53%
Oceanic	Environmental → Aquatic → Marine → Oceanic	0.76%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	0.76%
Unclassified	Environmental → Aquatic → Marine → Unclassified	0.76%
Clay	Environmental → Terrestrial → Soil → Clay	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	52.67%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	23.66%
Hypolimnion	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion	5.34%
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	4.58%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	3.82%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	2.29%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.53%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	1.53%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified	1.53%
Sediment	Environmental → Aquatic → Marine → Oceanic → Sediment	0.76%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	0.76%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	0.76%
Unclassified	Environmental → Terrestrial → Soil → Clay → Unclassified	0.76%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater	46.56%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	16.79%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	5.34%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion → Freshwater	5.34%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	4.58%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	3.82%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	2.29%
Anoxic Zone Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Anoxic Zone Freshwater	2.29%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	2.29%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	1.53%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater	1.53%
Lentic	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Lentic	0.76%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	0.76%
Freshwater	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater	0.76%
Aquatic	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Aquatic	0.76%
Marine Sediment	Environmental → Aquatic → Marine → Oceanic → Sediment → Marine Sediment	0.76%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	0.76%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	0.76%
Soil	Environmental → Terrestrial → Soil → Clay → Unclassified → Soil	0.76%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface	0.76%
Deep Subsurface Sediment	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface Sediment	0.76%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002307	Lentic bog actinobacteria communities from Grosse Fuchskuhle, Germany - Sample acI-C2 co-culture F-D7	Environmental	Open in IMG/M
3300003375	Freshwater actinobacteria microbial communities from Trout Bog Lake, Wisconsin, USA - enrichment TB-E6	Environmental	Open in IMG/M
3300003797	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE19Jun07	Environmental	Open in IMG/M
3300003804	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE29May09	Environmental	Open in IMG/M
3300003814	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH12Jul09	Environmental	Open in IMG/M
3300003815	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH27Jun07	Environmental	Open in IMG/M
3300003827	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH29Jun09	Environmental	Open in IMG/M
3300004692	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE27Jun07 (version 2)	Environmental	Open in IMG/M
3300004694	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE17Sep08 (version 2)	Environmental	Open in IMG/M
3300004804	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - MA0M	Environmental	Open in IMG/M
3300004805	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - MA6M	Environmental	Open in IMG/M
3300004807	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE02Aug07	Environmental	Open in IMG/M
3300006071	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH24Aug09	Environmental	Open in IMG/M
3300006072	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH12Aug09	Environmental	Open in IMG/M
3300006100	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE18Aug09	Environmental	Open in IMG/M
3300006101	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE15Jun09	Environmental	Open in IMG/M
3300006103	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE29Jun09	Environmental	Open in IMG/M
3300006104	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH12Aug09.1	Environmental	Open in IMG/M
3300006105	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE07Jul09	Environmental	Open in IMG/M
3300006112	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH10Oct08	Environmental	Open in IMG/M
3300006113	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH08Aug08	Environmental	Open in IMG/M
3300006127	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE24Aug09	Environmental	Open in IMG/M
3300006128	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE16Oct07	Environmental	Open in IMG/M
3300006129	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE06Nov07	Environmental	Open in IMG/M
3300008450	Freshwater viral communities during cyanobacterial harmful algal blooms (CHABs) in Western Lake Erie, USA - Oct 27, 2014 all contigs	Environmental	Open in IMG/M
3300009068	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140807_MF_MetaG	Environmental	Open in IMG/M
3300009151	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130820_MF_MetaG	Environmental	Open in IMG/M
3300009152	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140806_EF_MetaG	Environmental	Open in IMG/M
3300009154	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_131016_EF_MetaG	Environmental	Open in IMG/M
3300009159	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140212_EF_MetaG	Environmental	Open in IMG/M
3300009164	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130626_EF_MetaG	Environmental	Open in IMG/M
3300009165	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 1-3cm September2015	Environmental	Open in IMG/M
3300009168	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015	Environmental	Open in IMG/M
3300009180	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140625_EF_MetaG	Environmental	Open in IMG/M
3300009184	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_EF_MetaG	Environmental	Open in IMG/M
3300010157	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_131016_MF_MetaG	Environmental	Open in IMG/M
3300010158	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130625_MF_MetaG	Environmental	Open in IMG/M
3300010885	northern Canada Lakes Co-assembly	Environmental	Open in IMG/M
3300012695	Dystrophic lake water microbial communities from Trout Bog Lake, Wisconsin, USA - GEODES081 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300013093	Dystrophic lake water microbial communities from Trout Bog Lake, Wisconsin, USA - GEODES057 metaG	Environmental	Open in IMG/M
3300013094	Dystrophic lake water microbial communities from Trout Bog Lake, Wisconsin, USA - GEODES058 metaG	Environmental	Open in IMG/M
3300014811	Aquatic viral communities from ballast water - Michigan State University - AB_ballast water	Environmental	Open in IMG/M
3300015050	Freshwater viral communities from Lake Michigan, USA - Sp13.VD.MM110.S.D	Environmental	Open in IMG/M
3300017716	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.DCM.D	Environmental	Open in IMG/M
3300017722	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.S.N	Environmental	Open in IMG/M
3300017766	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MLB.S.D	Environmental	Open in IMG/M
3300017774	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM110.S.D	Environmental	Open in IMG/M
3300017784	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.D.N	Environmental	Open in IMG/M
3300020157	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Jun2016-L224-25m	Environmental	Open in IMG/M
3300020686	Freshwater microbial communities from Trout Bog Lake, WI - 12AUG2008 epilimnion	Environmental	Open in IMG/M
3300020695	Freshwater microbial communities from Trout Bog Lake, WI - 15JUL2008 epilimnion	Environmental	Open in IMG/M
3300020716	Freshwater microbial communities from Trout Bog Lake, WI - 13JUL2009 epilimnion	Environmental	Open in IMG/M
3300020723	Freshwater microbial communities from Trout Bog Lake, WI - 23JUN2009 hypolimnion	Environmental	Open in IMG/M
3300020731	Freshwater microbial communities from Trout Bog Lake, WI - 27JUN2007 epilimnion	Environmental	Open in IMG/M
3300021125	Freshwater microbial communities from Trout Bog Lake, WI - 11AUG2009 epilimnion	Environmental	Open in IMG/M
3300021126	Freshwater microbial communities from Trout Bog Lake, WI - 24JUN2008 epilimnion	Environmental	Open in IMG/M
3300021135	Freshwater microbial communities from Trout Bog Lake, WI - 03JUN2009 hypolimnion	Environmental	Open in IMG/M
3300021137	Freshwater microbial communities from Trout Bog Lake, WI - Practice 03JUN2009 hypolimnion	Environmental	Open in IMG/M
3300021354	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Jun2016-L221-5m	Environmental	Open in IMG/M
3300021963	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_657D	Environmental	Open in IMG/M
3300022179	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MLB.D.N	Environmental	Open in IMG/M
3300024343	Combined assembly of estuarine microbial communities from Columbia River, Washington, USA >3um size fraction	Environmental	Open in IMG/M
3300025353	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH06Jun08 (SPAdes)	Environmental	Open in IMG/M
3300025357	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE10Sep07 (SPAdes)	Environmental	Open in IMG/M
3300025369	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE28Sep08 (SPAdes)	Environmental	Open in IMG/M
3300025378	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH29May08 (SPAdes)	Environmental	Open in IMG/M
3300025379	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE21Jul09 (SPAdes)	Environmental	Open in IMG/M
3300025381	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE19Jun07 (SPAdes)	Environmental	Open in IMG/M
3300025387	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH20Aug07 (SPAdes)	Environmental	Open in IMG/M
3300025389	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH10Sep07 (SPAdes)	Environmental	Open in IMG/M
3300025390	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH04Jul08 (SPAdes)	Environmental	Open in IMG/M
3300025392	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE27Jun07 (SPAdes)	Environmental	Open in IMG/M
3300025395	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH18Jul08 (SPAdes)	Environmental	Open in IMG/M
3300025401	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE29Jun09 (SPAdes)	Environmental	Open in IMG/M
3300025403	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH23Jun09 (SPAdes)	Environmental	Open in IMG/M
3300025418	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE10Oct08 (SPAdes)	Environmental	Open in IMG/M
3300025424	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE06Nov07 (SPAdes)	Environmental	Open in IMG/M
3300025429	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE17Sep08 (SPAdes)	Environmental	Open in IMG/M
3300025435	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE18Jul08 (SPAdes)	Environmental	Open in IMG/M
3300025467	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH18Aug09 (SPAdes)	Environmental	Open in IMG/M
3300025470	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH12Aug09 (SPAdes)	Environmental	Open in IMG/M
3300025648	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH12Aug09.1 (SPAdes)	Environmental	Open in IMG/M
3300025773	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE29May09 (SPAdes)	Environmental	Open in IMG/M
3300025777	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH13Jun08 (SPAdes)	Environmental	Open in IMG/M
3300025783	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH08Jun09 (SPAdes)	Environmental	Open in IMG/M
3300025838	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH12Aug08 (SPAdes)	Environmental	Open in IMG/M
3300027710	Subsurface microbial communities from deep shales in Ohio, USA - Utica-3 well 1 S input2 FT (SPAdes)	Environmental	Open in IMG/M
3300027736	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140205_XF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027749	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130820_MF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027893	Marine sediment microbial communities from White Oak River estuary, North Carolina - WOR-1-52-54 (SPAdes)	Environmental	Open in IMG/M
3300027896	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies -HBP12 HB (SPAdes)	Environmental	Open in IMG/M
3300027971	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140807_MF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300028027	Subsurface sediment microbial communities from gas well in West Virginia, United States - MSEEL Well Study Marcellus 3H_FC	Environmental	Open in IMG/M
3300028394	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130628_MF_MetaG (v2)	Environmental	Open in IMG/M
3300031578	Soil microbial communities from Risofladan, Vaasa, Finland - TR-2	Environmental	Open in IMG/M
3300031707	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G12_20	Environmental	Open in IMG/M
3300031963	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA116	Environmental	Open in IMG/M
3300032018	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_middle	Environmental	Open in IMG/M
3300032117	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18003	Environmental	Open in IMG/M
3300032118	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G05_15	Environmental	Open in IMG/M
3300032562	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18017	Environmental	Open in IMG/M
3300032605	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18025_13	Environmental	Open in IMG/M
3300034104	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME02Aug2005-rr0120	Environmental	Open in IMG/M
3300034116	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-CONTROL-GENDONOR	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI24890J29729_10219094	3300002307	Lentic	MAIVQTQTTLFKANILSGLENFTLTSPYTYKIALYNGNANLN
JGI26470J50227_10267821	3300003375	Freshwater	MTIVQGQTTTFKTNLLSGLENFTLTSPYTYKIALYTGLATLNNTTTAYT
JGI26470J50227_10346272	3300003375	Freshwater	MSIVQGQTTTFKTNLLSGLENFTLTSPYTYKIALYTGLATLNNTTTAYT
JGI26470J50227_10681941	3300003375	Freshwater	MSNIVQGQTTTFKTNLLSGLENFAVGTAYTYKIALYTGNA
Ga0007846_10134072	3300003797	Freshwater	MTIVQGQTTQFKINVLSGXENFAXGTPYTXKIALXTAAASLDNTTTTYTS
Ga0007817_10006841	3300003804	Freshwater	MPIVQGQTTLFKANILSGLENFTLSSPYTYKIALYNANANLNNTTTAYT
Ga0007877_10018529	3300003814	Freshwater	MSIAQGQCTXFYQNXLXGLENFNTGTPYTYKIALYNGTANINNTTLTY
Ga0007877_10032331	3300003814	Freshwater	MSIVQGQTTAFKANVLSGLENFTLTSPYTYKIALYTALANLNNTT
Ga0007877_10195362	3300003814	Freshwater	MISQGQCTIFKQNLLSGLENFAVGTPYVYKIALYTSLANLDSST
Ga0007856_10065281	3300003815	Freshwater	MPIVQGQTTLFKANILSGLENFTLSSPYTYKIALYTANANLN
Ga0007856_10072411	3300003815	Freshwater	MTISQGQTTIFKQNCLSGLENFAAGTPYIYKIALYNGNASLDNSTTSYTT
Ga0007880_10023795	3300003827	Freshwater	MSITQGQTTQFKVNLLSGLENFASGTPYTYKIALYTGNAALN
Ga0007880_10249201	3300003827	Freshwater	MSIAQGQCTIFYQNLLSGLENFNTGTPYTYKIALYNGTANINNTTLTYTTA
Ga0065171_10789292	3300004692	Freshwater	MSNIVQGQTTVFKVNLLSGLENFAIGTPYTYKLALYTGNAIL
Ga0065170_10517111	3300004694	Freshwater	MIVQGQTTAFKTNLLLGAENFSGTSPYVYKIALYTALASLD
Ga0007796_101576171	3300004804	Freshwater	MAIQQGQCTVFKKNCLSGLENFAAGTSYVYKIALYSASANLSYSTLTY
Ga0007792_101643102	3300004805	Freshwater	MSITQGQTTQFKINILSGLENFASGTPYTYKIALYTGNANLNNTTS
Ga0007809_101075732	3300004807	Freshwater	MTIVQGQTTQFKINVLSGLENFAVGTPYTYKIALYTAAASLDNTTTTYTSS
Ga0007876_10985482	3300006071	Freshwater	MIVQGQTTAFKTNLLLGVENFSGTSPYVYKIALYTALASL
Ga0007881_10707451	3300006072	Freshwater	MSITQGQTTVFKTNLLSGLENFAVGTPYTYKIALYTGNANL
Ga0007881_11858762	3300006072	Freshwater	MPIVQGQTTLFKANILSGLENFTLTSPYTYKIALYNGNANLNNTTTAYTT
Ga0007806_10066651	3300006100	Freshwater	MPIVQGQTTLFKANILSGLENFAVGTPYTYKIALYN
Ga0007810_11109801	3300006101	Freshwater	MISQGQCTIFKQNLLSGLENFAVGTPYVYKIALYTSLANLD
Ga0007813_10555272	3300006103	Freshwater	MSIVQGQTTAFKANVLSGLENFTLTSPYTYKIALYTALANLNNTTAAYTPV
Ga0007882_102192651	3300006104	Freshwater	MTIVQGQTTQFKINVLSGLENFAVGTPYTYKIALY
Ga0007819_10142405	3300006105	Freshwater	MPIVQGQTTLFKANILSGLENFAVGTPYTYKIALYNANANLNNTTI
Ga0007857_10055506	3300006112	Freshwater	MPIVQGQTTLFKANILSGLENFTLTSPYTYKIALYN
Ga0007858_10628331	3300006113	Freshwater	MPIVQGQTTLFKANILSGLENFTLTSPYTYKIALY
Ga0007805_10371481	3300006127	Freshwater	MPIVQGQTTLFKANILSGLENFAVGTPYTYKIALYNANANLNN
Ga0007828_10320761	3300006128	Freshwater	MPIVQGQTTLFKANILSGLENFTITSPYTYKIALYNGNANLNNTTTGYTS
Ga0007828_10914721	3300006128	Freshwater	MTIVQGQTTQFKINVLSGLENFAVGTPYTYKIALYTAAASLDNTTTT
Ga0007834_11309812	3300006129	Freshwater	MAIVQTQTTIFKQNLLSGVENFTSNSPYVYKIALYNGNA
Ga0114880_11589691	3300008450	Freshwater Lake	MAIQQGQCTIFKKNCLSGLENFASGTSYVYKIALYTAAANLS
Ga0114973_107068462	3300009068	Freshwater Lake	VTIVQGQTTKFKTDALSGLVNFNTGTAYTYKIALYTANA
Ga0114962_100513826	3300009151	Freshwater Lake	MTIAQGQCTIFKQNCLSGLENFAVGTSYVYKIALYTATADLSYATLA
Ga0114962_103575092	3300009151	Freshwater Lake	MTIYQGLTTVFKQNCLSGRENFAAGTSYVYKVALYTALA
Ga0114980_102688712	3300009152	Freshwater Lake	VTIVQGQTTRFKTDALSGLVNFNTGTSYTYKIALYTANADLN
Ga0114963_104828552	3300009154	Freshwater Lake	MSIVQGQTTLFKTNLLSALENFAVGTPYVYKIALYNANANLNNST
Ga0114963_105407321	3300009154	Freshwater Lake	MPIQQGQCTIFKQNCLSGLENFAVGTTYTYKIALYTAL
Ga0114978_101257365	3300009159	Freshwater Lake	MIQQGQCTVFKKNCLSALENFAVGTPYIYKIALYTALADLSYATLT
Ga0114975_101898621	3300009164	Freshwater Lake	MPIQQGQCTIFKQNCLSGLENFAVGTPYTYKIALYTALAN
Ga0105102_102109203	3300009165	Freshwater Sediment	MIVQGQNTIFKQNLLSGLENFAVGTPYVYKIALYTA
Ga0105104_101727701	3300009168	Freshwater Sediment	MILGQAQTTTFKLNLLKGLENFFTGSPYTYKIALYNAL
Ga0114979_102143493	3300009180	Freshwater Lake	MAIQQGQTNVFKQNLLSGLENFAVGTPYTYKIALYTGNADLT
Ga0114976_102935041	3300009184	Freshwater Lake	MTIAQGQCTIFKQDCLSGRANFAVGTPYVYKIALYTGNADLSYATL
Ga0114964_101489961	3300010157	Freshwater Lake	MIAQGQTTIFKKNVLSGLENFATGTPYVYKIALYTADAELNAATLE
Ga0114960_102293792	3300010158	Freshwater Lake	MTIQQGQCTVFKQNCLSGLENFAAGTSYVYKIALYTANASLDNTTLTYT
Ga0133913_107611201	3300010885	Freshwater Lake	MTISQGLTTVFKQNCLSGRENFAAGTTYVYKVALYTALAD
Ga0133913_112498895	3300010885	Freshwater Lake	MTIAQGQCTIFKKNCLSALENFAVGTPYTYKIALYTANATLNQSTLTY
Ga0133913_125319013	3300010885	Freshwater Lake	MPIQQGQCTVFQKNCLSGLENFATGTPYVYKVALYTALANL
Ga0133913_130421801	3300010885	Freshwater Lake	MTIYQGLTTVFKQNCLSGRENFAAGTSYVYKVALYTALADLSYATL
Ga0133913_132871771	3300010885	Freshwater Lake	MSIGQTQTTIFKLNLLKALENFNVGTPYTYKIALYTANAT
Ga0157577_10376802	3300012695	Freshwater	MIVQGLTTIFKQNCLSQLENFTGTSPYTYKLALYTALANLDNTTT
Ga0164296_11166972	3300013093	Freshwater	MPIVQGQTTLFKANILSGLENFTLSSPYAYKIALYTANANLNNTTIAYDP
Ga0164297_102830022	3300013094	Freshwater	MPIVQGQTTLFKANILSGLENFTLSSPYTYKIALYNGNANLNNTTTTYTS
Ga0119960_11001832	3300014811	Aquatic	MAIGQTQTTVFKLNLLKALENFNVGTPYTYKIALYTANDRDWE
Ga0181338_10305041	3300015050	Freshwater Lake	VTIVQGQTTKFKTDALSGLVNFNTGTAYTYKIALYTANAT
Ga0181350_11411482	3300017716	Freshwater Lake	MIQQGATTIFKKNCLSGLENFAAGTPYTYKIALYTA
Ga0181347_11070552	3300017722	Freshwater Lake	VTIVQGQTTKFKTDALSGLVNFNTGTAYTYKIALYTANATLNNTTAAYTVTGEVV
Ga0181343_10628321	3300017766	Freshwater Lake	MISQGQCNIFKQNCLSGLENFAVGTPYTYKIALYTSL
Ga0181358_11389071	3300017774	Freshwater Lake	VTIVQGQTTKFKTDALSGLVNFNTGTAYTYKIALYTANATLNNTTAAYTVTGE
Ga0181348_13099621	3300017784	Freshwater Lake	MIQQGATTIFKKNCLSGLENFAAGTPYTYKIALYTALADLSYKT
Ga0194049_10470921	3300020157	Anoxic Zone Freshwater	MAIVQGQTTEFKTNLLKGLENFNTGSPYVYRIALY
Ga0214194_1075231	3300020686	Freshwater	MIVQGQTTVFKQNLLSGLENFATGTTYTYKIALYTANASLDSTT
Ga0214190_10052501	3300020695	Freshwater	MSIAQTQTTVFKQNCLSGLENFAIGTPYTYKIALYTSLANLNASTLT
Ga0214207_10127232	3300020716	Freshwater	MTIVQGQTTTFKTNLLSGLENFTLTSPYTYKIALYTGLATLNNTT
Ga0214249_10188483	3300020723	Freshwater	MTIVQGQTTTFKTNLLSGLENFTLTSPYTYKIALYTGLATLN
Ga0214170_10661252	3300020731	Freshwater	MSITQGQTTQFKVNLLSGLENFASGTPYTYKIALYTGNAALNNAT
Ga0214211_10173122	3300021125	Freshwater	MSIAQTQTTVFKQNCLSGLENFAIGTPYTYKIALYTSLANLNAST
Ga0214187_10341562	3300021126	Freshwater	MSNIVQGQTTTFKTNLLSGLENFAVGTAYTYKIALYTGNAILNNATTA
Ga0214247_100368112	3300021135	Freshwater	MSITQGQTTQFKINILSGLENFASGTPYTYKIALYTGNANLNNTTSAYT
Ga0214165_10553252	3300021137	Freshwater	MIVQGQTTAFKTNLLLGAENFSGTSPYVYKIALYTALASLDNTT
Ga0194047_100937861	3300021354	Anoxic Zone Freshwater	MAIVQGQTTVFKLNLLKALENFAVGTPYTYKIALYNALADLSSSTTA
Ga0194047_101612781	3300021354	Anoxic Zone Freshwater	MSITQGQTTQFKVNLLSGLENFASGTPYTYKIALYTGNAALNS
Ga0222712_107947921	3300021963	Estuarine Water	MILGQAQTTTFKLNLLKGLENFFTGSPYTYKIALYN
Ga0181353_10244495	3300022179	Freshwater Lake	MIVQGQTTIFKKNLLSGLENFATGTTQVYKIALYTANAELNSDTLIYTTS
Ga0244777_104901261	3300024343	Estuarine	MIVQGQTTIFKQNLLSGLENFATGTTQVYKIALYTANAELTASTL
Ga0208255_1090641	3300025353	Freshwater	MTIAQGLTTSFKQNCLSGLVNFAVGTSYVYKIALYTGN
Ga0208383_10429721	3300025357	Freshwater	MIVQGQTTAFKTNLLLGMENFSGTSPYVYKIALYTALASLDNTT
Ga0208382_10087291	3300025369	Freshwater	MPIVQGQTTLFKANILSGLENFTLSSPYTYKIALYNANANLNNTTT
Ga0208382_10115661	3300025369	Freshwater	MSIIQGQTTVFKVNLLSGLENFAVGTPYTYKIALYTGNASLNNS
Ga0207960_10504332	3300025378	Freshwater	MPIVQGQTTLFKANILSGLENFTLSSPYTYKIALYNGNANLNNTTT
Ga0208738_10079555	3300025379	Freshwater	MSIAQGQCTVFYQNLLSGLENFNTGTPYTYKIALYN
Ga0208738_10115911	3300025379	Freshwater	MPIVQGQTTLFKANILSGLENFTLTSPYTYKIALYNGNAQLDNTTTTY
Ga0208738_10431481	3300025379	Freshwater	MPIVQGQTTLFKANILSGLENFAVGTPYTYKIALYNASANLNNTTIAYTSDNEVTG
Ga0208871_10202492	3300025381	Freshwater	MPIVQGQTTLFKANILSGLENFTLTSPYTYKIALYNGNANLDNTTTAYTST
Ga0207959_10291561	3300025387	Freshwater	MSITQGQTTQFKVNLLSGLENFASGTPYTYKIALYTGNAALNN
Ga0208257_10331482	3300025389	Freshwater	MSNIVQGQTTVFKVNLLSGLENFSVGTPYTYNIALYTGNAS
Ga0208257_10408872	3300025389	Freshwater	MSNIVQGQTTVFKVNLLSGLENFAAGTSYTYKLALYTGNAILNDATTAY
Ga0208743_10258982	3300025390	Freshwater	MPIAQGLTTVFKQNCLSGLENFAAGTPYTYNIALY
Ga0208380_10429452	3300025392	Freshwater	MPIVQGQTTLFKANILSGLENFTLSSPYTYKIALYNANANLNNTTTGYTSTNEVT
Ga0208109_10303451	3300025395	Freshwater	MSNIVQGQTTVFKVNLLSGLENFAIGTPYTYKLAIYTGNAILNDAT
Ga0207955_10382031	3300025401	Freshwater	MSIVQGQTTAFKANVLSGLENFTLTSPYTYKIALYTALANLNNTTAAYTPVG
Ga0208745_10170291	3300025403	Freshwater	MSITQGQTTQFKINILSGLENFASGTPYTYKIALYTGN
Ga0208745_10171151	3300025403	Freshwater	MPIVQGQTTLFKANILSGLENFTLTSPYTYKIALYNGNANLNNTTTAY
Ga0208253_10456421	3300025418	Freshwater	MTISQGQCTVFKTNLLSGLENFAVGTPYTYKVALYTGNAILNSAT
Ga0208617_10033861	3300025424	Freshwater	MPIVQGQTTLFKANILSGLENFTLSSPYTYKIALYNANANLNNTT
Ga0208500_10361831	3300025429	Freshwater	MTISQGQTTIFKQNCLSGLENFAAGTPYIYKIALY
Ga0208618_10234211	3300025435	Freshwater	MSITQGQTTQFKVNLLSGLENFASGTPYTYKIALYT
Ga0208260_10322862	3300025467	Freshwater	MPIVQGQTTLFKANILSGLENFTLTSPYTYKIALYNGNANLDNTTTAYT
Ga0208260_10452902	3300025467	Freshwater	MPIIQTQTTLFKANILSGLENFTLTSPYTYKIALYNGNANLNNTTT
Ga0208389_10429771	3300025470	Freshwater	MSITQGQTTVFKTNLLSGLENFAVGTPYTYKIALY
Ga0208507_10763922	3300025648	Freshwater	MSNIVQGQTTVFKVNLLSGLENFAAGTSYTYKLALYTG
Ga0208507_11437521	3300025648	Freshwater	MTIVQGQTTQFKINVLSGLENFAVGTPYTYKIALYTAAASLDN
Ga0208104_100120910	3300025773	Freshwater	MPIVQGQTTLFKANILSGLENFTLTSPYTYKIALYNGNAN
Ga0208110_10068531	3300025777	Freshwater	MPIVQGQTTLFKANILSGLENFTLSSPYTYKIALY
Ga0208258_10105514	3300025783	Freshwater	MISQGQCTAFKTNLLSGLENFAVGTPYTYKIALYTG
Ga0208258_10159693	3300025783	Freshwater	MPIVQGQTTLFKANILSGLENFTLTSPYTYKIALYNGNA
Ga0208872_10973191	3300025838	Freshwater	MPIVQGQTTLFKANILSGLENFTLTSPYTYKIALYNG
Ga0209599_100576052	3300027710	Deep Subsurface	VTIVQGQTTKFKTDALSGLVNFNTGTSYTYKIALYTANADLNNATAVYTT
Ga0209190_101566411	3300027736	Freshwater Lake	MTIVQGQTTRFKTDALSGLVNFNTGTSYTYKIALYTANADLNNSTAVYTTV
Ga0209190_11330132	3300027736	Freshwater Lake	VTIVQGQTTKFKTDALSGLVNFNTGTAYTYKIALYTANATLNNTTAA
Ga0209084_10800494	3300027749	Freshwater Lake	MPIQQGQCTIFKKNVLSGLENFAAGTSYVYKIALYTALAD
Ga0209636_111424431	3300027893	Marine Sediment	MIVQGQTTVFKQNLLSGLENFAVGTPYTYKIALYNAFAELNNQTLAYT
Ga0209777_103884572	3300027896	Freshwater Lake Sediment	MISQGQCTAFKTNLLSGLENFAVGTPYTYKIALYTGNANLNNSTTAY
Ga0209777_107630122	3300027896	Freshwater Lake Sediment	MSIVQGQTTLFKTNILSALENFAVGTPYTYKLALY
Ga0209777_111436841	3300027896	Freshwater Lake Sediment	MTGITQCMTTSFKVDCLSGTVNFAAGTPYVYKIALYSVANGAS
Ga0209401_10925001	3300027971	Freshwater Lake	VTIVQGQTTKFKTDALSGLVNFNTGTAYTYKIALYTANATLN
Ga0247722_102486901	3300028027	Deep Subsurface Sediment	MTIQQGQTTVFKKNCLSGLENFAAGTPYVYKIALYTA
Ga0304730_12368791	3300028394	Freshwater Lake	VTIVQGQTTRFKTDALSGLVNFNTGTAYTYKIALYTANADLNNATAVYTVT
Ga0307376_104775982	3300031578	Soil	MIQQGQTTIFKQNCLSALENFATGTPYTYKIALYTATA
Ga0315291_105964843	3300031707	Sediment	MTIQQGQCTVFKKNCLSGLENFASGTSYVYKIALYTANA
Ga0315901_102195291	3300031963	Freshwater	MTIQQGQCTVFKKNCLSGLENFASGTSYVYKVALYTANA
Ga0315272_106455801	3300032018	Sediment	VTIVQGQTTKFKTDALSGLVNFNTGTAYTYKIALYTANATLNNTTAAYTVTG
Ga0316218_11308932	3300032117	Freshwater	MITQTLTTTFKVNALSQLENFTASSPYTYKLALYTALAGL
Ga0315277_105237901	3300032118	Sediment	MIVQGQCTIFKQNVLSGVENFATGTPYVYKIALYTADAELNA
Ga0316226_13471461	3300032562	Freshwater	MSNIVQGQTTVFKVNLLSGLENFAVGTPYTYNIALYT
Ga0316232_102046811	3300032605	Freshwater	MIIQGQTTQFKVNLLSGLENFAVGTPYVYKIALYNAN
Ga0316232_12944482	3300032605	Freshwater	MIVQGQTTAFKTNLLLGAENFSGTSPYVYKIALYTALASLDNTTTAYSSVNE
Ga0335031_0859997_382_501	3300034104	Freshwater	MIQQGATTVFKLNLLNGVESFTTDTYKIALYTALADLGPT
Ga0335068_0223912_1_111	3300034116	Freshwater	MPISQGLCTVFKKNCLSGLENFAAGTPYTYKIALYTS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F061520

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences