Metagenome Family F061387

Basic Information
Family ID	F061387
Family Type	Metagenome
Number of Sequences	132
Average Sequence Length	95 residues
Representative Sequence	MSSLDPSQLERCLASLNHLCESLPECDAKGKLRGKLGRLQAAIADYKRDGHVGPVAHELSGAHAIVQRFHDEEPISRMLQTLSALRHTIEQSAA
Number of Associated Samples	105
Number of Associated Scaffolds	132

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	8.40 %
% of genes near scaffold ends (potentially truncated)	34.09 %
% of genes from short scaffolds (< 2000 bps)	75.00 %
Associated GOLD sequencing projects	90
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.73

Most Common Taxonomy
Group	Bacteria (59.848 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (13.636 % of family members)
Environment Ontology (ENVO)	Unclassified (35.606 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (69.697 % of family members)

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 61.48% β-sheet: 0.00% Coil/Unstructured: 38.52%
Feature Viewer

Powered by Feature Viewer

SCOP family	SCOP domain	Representative PDB	TM-score
a.29.6.1: Plant invertase/pectin methylesterase inhibitor	d2cj4a_	2cj4	0.77828
f.63.1.1: Claudin	d3jbre_	3jbr	0.77044
a.29.5.0: automated matches	d2e0aa1	2e0a	0.76953
a.29.5.0: automated matches	d4e01a1	4e01	0.76474
a.216.1.1: I/LWEQ domain	d1u89a1	1u89	0.76089

Pfam ID	Name	% Frequency in 132 Family Scaffolds
PF13424	TPR_12	34.09
PF04679	DNA_ligase_A_C	31.82
PF13709	DUF4159	4.55
PF09594	GT87	2.27
PF14023	DUF4239	1.52
PF04738	Lant_dehydr_N	0.76
PF00092	VWA	0.76
PF13493	DUF4118	0.76
PF00593	TonB_dep_Rec	0.76
PF02517	Rce1-like	0.76
PF10518	TAT_signal	0.76

COG ID	Name	Functional Category	% Frequency in 132 Family Scaffolds
COG1793	ATP-dependent DNA ligase	Replication, recombination and repair [L]	31.82
COG1266	Membrane protease YdiL, CAAX protease family	Posttranslational modification, protein turnover, chaperones [O]	0.76
COG4449	Predicted protease, Abi (CAAX) family	General function prediction only [R]	0.76

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	59.85 %
Unclassified	root	N/A	40.15 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	59.85 %
Unclassified	root	N/A	40.15 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	59.85 %
Unclassified	root	N/A	40.15 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.15 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	11.36 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	5.30 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.15 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	8.33 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	4.55 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.15 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	8.33 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	4.55 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.15 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	8.33 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	2.27 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	2.27 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.15 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	8.33 %
Sorangiineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae	2.27 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2.27 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.15 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	8.33 %
Sandaracinaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Sandaracinaceae	2.27 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2.27 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.15 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	8.33 %
Sandaracinus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Sandaracinaceae → Sandaracinus	2.27 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2.27 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.15 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	8.33 %
Sandaracinus amylolyticus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Sandaracinaceae → Sandaracinus → Sandaracinus amylolyticus	2.27 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2.27 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2162886006\|SwRhRL3b_contig_2248699	All Organisms → cellular organisms → Bacteria	1989	Open in IMG/M
2162886007\|SwRhRL2b_contig_3293	All Organisms → cellular organisms → Bacteria	2806	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_105752285	Not Available	1943	Open in IMG/M
3300000550\|F24TB_10759582	Not Available	607	Open in IMG/M
3300003267\|soilL1_10089707	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2658	Open in IMG/M
3300003319\|soilL2_10035669	All Organisms → cellular organisms → Bacteria	1677	Open in IMG/M
3300003324\|soilH2_10078311	All Organisms → cellular organisms → Bacteria → Acidobacteria	2187	Open in IMG/M
3300004019\|Ga0055439_10091063	Not Available	892	Open in IMG/M
3300004114\|Ga0062593_100006835	All Organisms → cellular organisms → Bacteria	4931	Open in IMG/M
3300004114\|Ga0062593_100045140	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2686	Open in IMG/M
3300004156\|Ga0062589_100703603	All Organisms → cellular organisms → Bacteria	897	Open in IMG/M
3300004157\|Ga0062590_101058179	All Organisms → cellular organisms → Bacteria	777	Open in IMG/M
3300004463\|Ga0063356_100836641	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1289	Open in IMG/M
3300005093\|Ga0062594_100014679	All Organisms → cellular organisms → Bacteria	3024	Open in IMG/M
3300005093\|Ga0062594_100021607	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2717	Open in IMG/M
3300005093\|Ga0062594_100046620	All Organisms → cellular organisms → Bacteria	2176	Open in IMG/M
3300005093\|Ga0062594_102810612	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Sandaracinaceae → Sandaracinus → Sandaracinus amylolyticus	541	Open in IMG/M
3300005293\|Ga0065715_11147034	All Organisms → cellular organisms → Bacteria	509	Open in IMG/M
3300005294\|Ga0065705_10283409	All Organisms → cellular organisms → Bacteria	1097	Open in IMG/M
3300005294\|Ga0065705_11026037	Not Available	540	Open in IMG/M
3300005295\|Ga0065707_10005735	All Organisms → cellular organisms → Bacteria	4133	Open in IMG/M
3300005295\|Ga0065707_10207551	Not Available	1281	Open in IMG/M
3300005328\|Ga0070676_10088597	All Organisms → cellular organisms → Bacteria	1891	Open in IMG/M
3300005332\|Ga0066388_102043878	All Organisms → cellular organisms → Bacteria	1029	Open in IMG/M
3300005334\|Ga0068869_100352531	Not Available	1200	Open in IMG/M
3300005335\|Ga0070666_10769344	Not Available	708	Open in IMG/M
3300005336\|Ga0070680_100939989	All Organisms → cellular organisms → Bacteria	746	Open in IMG/M
3300005338\|Ga0068868_100573455	All Organisms → cellular organisms → Bacteria	997	Open in IMG/M
3300005339\|Ga0070660_100995232	Not Available	708	Open in IMG/M
3300005340\|Ga0070689_100700059	All Organisms → cellular organisms → Bacteria	885	Open in IMG/M
3300005341\|Ga0070691_10497338	All Organisms → cellular organisms → Bacteria	704	Open in IMG/M
3300005343\|Ga0070687_100493735	All Organisms → cellular organisms → Bacteria	823	Open in IMG/M
3300005354\|Ga0070675_102236237	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Sandaracinaceae → Sandaracinus → Sandaracinus amylolyticus	504	Open in IMG/M
3300005356\|Ga0070674_101301901	Not Available	648	Open in IMG/M
3300005365\|Ga0070688_100117916	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1774	Open in IMG/M
3300005365\|Ga0070688_100881191	All Organisms → cellular organisms → Bacteria	705	Open in IMG/M
3300005366\|Ga0070659_100447672	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1095	Open in IMG/M
3300005406\|Ga0070703_10555816	Not Available	524	Open in IMG/M
3300005438\|Ga0070701_10001712	All Organisms → cellular organisms → Bacteria	8241	Open in IMG/M
3300005438\|Ga0070701_11315421	All Organisms → cellular organisms → Bacteria	517	Open in IMG/M
3300005441\|Ga0070700_100818224	Not Available	752	Open in IMG/M
3300005456\|Ga0070678_101989107	Not Available	550	Open in IMG/M
3300005466\|Ga0070685_10412735	Not Available	938	Open in IMG/M
3300005468\|Ga0070707_102113282	Not Available	531	Open in IMG/M
3300005471\|Ga0070698_101563548	All Organisms → cellular organisms → Bacteria	611	Open in IMG/M
3300005526\|Ga0073909_10348614	Not Available	685	Open in IMG/M
3300005530\|Ga0070679_101893196	Not Available	545	Open in IMG/M
3300005543\|Ga0070672_100168824	All Organisms → cellular organisms → Bacteria	1819	Open in IMG/M
3300005549\|Ga0070704_102226350	All Organisms → cellular organisms → Bacteria	510	Open in IMG/M
3300005577\|Ga0068857_101592374	All Organisms → cellular organisms → Bacteria	638	Open in IMG/M
3300005713\|Ga0066905_100338511	Not Available	1197	Open in IMG/M
3300005841\|Ga0068863_100530112	All Organisms → cellular organisms → Bacteria	1162	Open in IMG/M
3300005842\|Ga0068858_100065076	All Organisms → cellular organisms → Bacteria	3374	Open in IMG/M
3300006844\|Ga0075428_100036238	All Organisms → cellular organisms → Bacteria	5434	Open in IMG/M
3300006844\|Ga0075428_100114177	All Organisms → cellular organisms → Bacteria	2943	Open in IMG/M
3300006871\|Ga0075434_100492045	Not Available	1247	Open in IMG/M
3300006880\|Ga0075429_100036431	All Organisms → cellular organisms → Bacteria	4279	Open in IMG/M
3300006880\|Ga0075429_100059954	All Organisms → cellular organisms → Bacteria	3315	Open in IMG/M
3300006969\|Ga0075419_10033003	All Organisms → cellular organisms → Bacteria	3215	Open in IMG/M
3300006969\|Ga0075419_11145832	Not Available	572	Open in IMG/M
3300007076\|Ga0075435_102055342	Not Available	502	Open in IMG/M
3300009094\|Ga0111539_10032586	All Organisms → cellular organisms → Bacteria	6327	Open in IMG/M
3300009094\|Ga0111539_11658407	All Organisms → cellular organisms → Bacteria	741	Open in IMG/M
3300009094\|Ga0111539_13487535	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	505	Open in IMG/M
3300009098\|Ga0105245_11416717	Not Available	745	Open in IMG/M
3300009147\|Ga0114129_10013240	All Organisms → cellular organisms → Bacteria → Proteobacteria	11748	Open in IMG/M
3300009147\|Ga0114129_10013561	All Organisms → cellular organisms → Bacteria	11613	Open in IMG/M
3300009147\|Ga0114129_11130048	Not Available	979	Open in IMG/M
3300009156\|Ga0111538_10122986	All Organisms → cellular organisms → Bacteria	3295	Open in IMG/M
3300009156\|Ga0111538_10649207	All Organisms → cellular organisms → Bacteria	1338	Open in IMG/M
3300009162\|Ga0075423_10083633	All Organisms → cellular organisms → Bacteria	3328	Open in IMG/M
3300010046\|Ga0126384_11227897	Not Available	692	Open in IMG/M
3300010046\|Ga0126384_11905553	Not Available	566	Open in IMG/M
3300010047\|Ga0126382_10055620	Not Available	2344	Open in IMG/M
3300010047\|Ga0126382_11351430	Not Available	647	Open in IMG/M
3300010360\|Ga0126372_10416876	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1232	Open in IMG/M
3300010360\|Ga0126372_11552633	Not Available	699	Open in IMG/M
3300010362\|Ga0126377_10902423	All Organisms → cellular organisms → Bacteria → Acidobacteria	946	Open in IMG/M
3300010373\|Ga0134128_11901955	Not Available	655	Open in IMG/M
3300010399\|Ga0134127_10038620	All Organisms → cellular organisms → Bacteria → Acidobacteria	3874	Open in IMG/M
3300010399\|Ga0134127_12412019	Not Available	605	Open in IMG/M
3300012948\|Ga0126375_10140401	All Organisms → cellular organisms → Bacteria	1506	Open in IMG/M
3300012948\|Ga0126375_10467759	Not Available	931	Open in IMG/M
3300013100\|Ga0157373_10629846	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	782	Open in IMG/M
3300013102\|Ga0157371_11126821	All Organisms → cellular organisms → Bacteria → Acidobacteria	602	Open in IMG/M
3300013296\|Ga0157374_10774239	Not Available	975	Open in IMG/M
3300014325\|Ga0163163_13316085	Not Available	502	Open in IMG/M
3300014745\|Ga0157377_10049940	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2353	Open in IMG/M
3300014968\|Ga0157379_11404390	All Organisms → cellular organisms → Bacteria	677	Open in IMG/M
3300014969\|Ga0157376_10227304	All Organisms → cellular organisms → Bacteria	1731	Open in IMG/M
3300015371\|Ga0132258_10040597	All Organisms → cellular organisms → Bacteria	10555	Open in IMG/M
3300015371\|Ga0132258_13126500	All Organisms → cellular organisms → Bacteria	1144	Open in IMG/M
3300015372\|Ga0132256_100062667	All Organisms → cellular organisms → Bacteria	3496	Open in IMG/M
3300015372\|Ga0132256_102514635	Not Available	616	Open in IMG/M
3300015374\|Ga0132255_100030316	All Organisms → cellular organisms → Bacteria	6824	Open in IMG/M
3300015374\|Ga0132255_106305515	Not Available	502	Open in IMG/M
3300025558\|Ga0210139_1043928	Not Available	897	Open in IMG/M
3300025893\|Ga0207682_10041964	All Organisms → cellular organisms → Bacteria	1868	Open in IMG/M
3300025901\|Ga0207688_10632462	All Organisms → cellular organisms → Bacteria	675	Open in IMG/M
3300025904\|Ga0207647_10735639	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Sandaracinaceae → Sandaracinus → Sandaracinus amylolyticus	535	Open in IMG/M
3300025907\|Ga0207645_10076268	All Organisms → cellular organisms → Bacteria	2147	Open in IMG/M
3300025908\|Ga0207643_10004310	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	7648	Open in IMG/M
3300025917\|Ga0207660_10575137	All Organisms → cellular organisms → Bacteria	917	Open in IMG/M
3300025918\|Ga0207662_10025672	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3394	Open in IMG/M
3300025919\|Ga0207657_10998110	Not Available	642	Open in IMG/M
3300025926\|Ga0207659_10484085	All Organisms → cellular organisms → Bacteria	1046	Open in IMG/M
3300025933\|Ga0207706_10018351	All Organisms → cellular organisms → Bacteria	6295	Open in IMG/M
3300025935\|Ga0207709_11539565	All Organisms → cellular organisms → Bacteria	552	Open in IMG/M
3300025937\|Ga0207669_11701063	All Organisms → cellular organisms → Bacteria	539	Open in IMG/M
3300025941\|Ga0207711_11422174	Not Available	636	Open in IMG/M
3300025942\|Ga0207689_11036928	Not Available	692	Open in IMG/M
3300025949\|Ga0207667_11830647	Not Available	570	Open in IMG/M
3300025986\|Ga0207658_11132574	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	715	Open in IMG/M
3300026075\|Ga0207708_10715557	Not Available	857	Open in IMG/M
3300026088\|Ga0207641_11073179	Not Available	803	Open in IMG/M
3300026089\|Ga0207648_10221138	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1683	Open in IMG/M
3300026095\|Ga0207676_10041849	All Organisms → cellular organisms → Bacteria	3520	Open in IMG/M
3300026095\|Ga0207676_10258115	Not Available	1572	Open in IMG/M
3300026116\|Ga0207674_10344859	Not Available	1440	Open in IMG/M
3300026121\|Ga0207683_11837626	Not Available	555	Open in IMG/M
3300027907\|Ga0207428_10141592	All Organisms → cellular organisms → Bacteria	1835	Open in IMG/M
3300031547\|Ga0310887_10462664	Not Available	758	Open in IMG/M
3300031720\|Ga0307469_11587838	Not Available	628	Open in IMG/M
3300031740\|Ga0307468_100870494	Not Available	777	Open in IMG/M
3300031740\|Ga0307468_101977423	Not Available	558	Open in IMG/M
3300031943\|Ga0310885_10574919	Not Available	622	Open in IMG/M
3300032180\|Ga0307471_101701568	Not Available	784	Open in IMG/M
3300032180\|Ga0307471_101765184	All Organisms → cellular organisms → Bacteria	771	Open in IMG/M
3300032211\|Ga0310896_10773225	Not Available	548	Open in IMG/M
3300033412\|Ga0310810_10795634	Not Available	855	Open in IMG/M
3300034817\|Ga0373948_0045435	All Organisms → cellular organisms → Bacteria	931	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	53.03%
Environmental	Environmental	46.97%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	53.03%
Terrestrial	Environmental → Terrestrial	45.45%
Aquatic	Environmental → Aquatic	1.52%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	45.45%
Rhizosphere	Host-Associated → Plants → Rhizosphere	33.33%
Rhizoplane	Host-Associated → Plants → Rhizoplane	18.94%
Marine	Environmental → Aquatic → Marine	1.52%
Roots	Host-Associated → Plants → Roots	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	29.55%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	20.45%
Loam	Environmental → Terrestrial → Soil → Loam	15.91%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	12.88%
Soil	Host-Associated → Plants → Rhizosphere → Soil	12.88%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	4.55%
Wetlands	Environmental → Aquatic → Marine → Wetlands	1.52%
Soil	Host-Associated → Plants → Rhizoplane → Soil	1.52%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	20.45%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	14.39%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	13.64%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	12.88%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	12.88%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	8.33%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	4.55%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	3.79%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.27%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	1.52%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.52%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	1.52%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.76%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.76%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.76%

Habitat	Taxonomy	Distribution
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	13.64%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	6.82%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	6.06%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	6.06%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	4.55%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	4.55%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	3.79%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.79%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	3.79%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	3.03%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	3.03%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	3.03%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.27%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	2.27%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.27%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	2.27%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.27%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	1.52%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.52%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	1.52%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.52%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.52%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.52%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	1.52%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.76%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.76%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.76%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere	0.76%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.76%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.76%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.76%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.76%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.76%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.76%
Rhizosphere Soil	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil	0.76%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2162886006	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
2162886007	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2	Host-Associated	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000550	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU amended with acetate total DNA F2.4 TB clc assemly	Environmental	Open in IMG/M
3300003267	Sugarcane bulk soil Sample L1	Environmental	Open in IMG/M
3300003319	Sugarcane bulk soil Sample L2	Environmental	Open in IMG/M
3300003324	Sugarcane bulk soil Sample H2	Environmental	Open in IMG/M
3300004019	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleB_D2	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005406	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG	Environmental	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300013100	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG	Host-Associated	Open in IMG/M
3300013102	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG	Host-Associated	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300025558	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleB_D2 (SPAdes)	Environmental	Open in IMG/M
3300025893	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025904	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes)	Host-Associated	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025949	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300031547	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031943	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D2	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032211	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D1	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M
3300034817	Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_1	Host-Associated	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
SwRhRL3b_0112.00002200	2162886006	Switchgrass Rhizosphere	MDREDLSQLERCIESLHHLCESLPECDAVGKLRGKLGRLQSAVADYKRDGDVGPLRQELSAAHGIVQHFHDADPLTRMLQTLSALRQSMDKPFAR
SwRhRL2b_0377.00004570	2162886007	Switchgrass Rhizosphere	MDREELSQLERCIESLHHLCESLPECDAVGKLRGKLGRLQSAVADYKRDGDVGPLRQELSAAHGIVQHFHDADPLTRMLQTLSALRQSMDKPFAR
INPhiseqgaiiFebDRAFT_1057522853	3300000364	Soil	VDPSQLERCLASLNQLCESLPECDAKGKLRGKLGRLQSAIADYERDGQVGPVCQELSAAHXXVQRFHDAEPISRMLHTLSALRRTIEEPAA*
F24TB_107595822	3300000550	Soil	CSLTEMNSLDPSQLERCIASLNHLCESLPECDAKGKLRGKLGRLQSAVADYKRDGHVGPVCEELSAAHXXXXXFHDAEPISLMLQALXXXXXTIERQPAA*
soilL1_100897072	3300003267	Sugarcane Root And Bulk Soil	MNSLDASQLERCLASLDHLCESLPECDAKGKLRGKLGRLQAAVADYKRDGHVGPVSHELTGAHALVQRFHDEEPISRMLQMLAALLHTIDRSPA*
soilL2_100356692	3300003319	Sugarcane Root And Bulk Soil	MVATPICGMDCQHLSRLERSIEVLHHLCETLPECDAAGKLRGKLGRLQSAMAEYKRNGDAGPLREELSAAHAIVERFHDTEPISRMLQMLSALRRTMDQPAA*
soilH2_100783112	3300003324	Sugarcane Root And Bulk Soil	MVAHHCGMDCQHLSRLERSIEMLHHLCETLPECDAAGKLRGKLGRLQSAMAEYKRNGDAGPLREELSAAHAIVQRFHDTEPISRMLQMLSALRRTMDQPVA*
Ga0055439_100910631	3300004019	Natural And Restored Wetlands	PVTNRASRRDLSDTIKTGIRVALTVKRMNSVDPLQLERCLASLNQLCESLPECDAKGKLRGKLGRLQSAVADYKRDGHVDPVCQELSAAHALVQRFHDAEPISRMLQALSALRRTTEEPAA*
Ga0062593_1000068353	3300004114	Soil	MDRQHLSRLERSIELLHHLCETLPECDAAGKLRGKLGRLQSAMADYKRNGDAGPLREELSAAHAIVQRFHDTEPISRMLRTLSALRRTMDQPVA*
Ga0062593_1000451403	3300004114	Soil	MSAFDSSQLERGLASLNHLCESLPECDAKGKLRGKLGRLQAAIADYKRDGHLPPVCQELSGAHTIVQRFHDEEPISQMLQTLVALRHTIDQSPA*
Ga0062589_1007036032	3300004156	Soil	MSSLDPSQLERCLASLNHLCESLPECDAKGKLRGKLGRLQAAIADYKRDGYLGPVTHELSGAHAIVQRFHDEEPISRMLQTLSALRHTIEQSAA*
Ga0062590_1010581792	3300004157	Soil	MNSLDPSQLERCLASLNHLCESLPECDAKGKLRGKLGRLQSAIADYKGNGDAALLRQELSDAHALVQRIHDAEPISQMLQALSALCRTIELPAA*
Ga0063356_1008366412	3300004463	Arabidopsis Thaliana Rhizosphere	MSSLDPSQLERCLASLNHLCESLPECDAKGKLRGKLGGLQAAIADYKRDGQVAPVTHEVSGAHAIVRRFHDEEPISRMLQTLSALRHTIEQSAA*
Ga0062594_1000146792	3300005093	Soil	MSAFDSSQLERGLASLNHLCESLPECDAKGKLRGKLGRLQAAIADYKRDGHLPPVCQELSGAHSIVQRFHDEEPISQMLQTLVALRHTIDQSPA*
Ga0062594_1000216072	3300005093	Soil	MSSLDPSQLERCLASLNHLCESLPECDAKGKLRGKLGRVQSAIADYKRDGHLRPLCQELSGAQTIVQRFHDEEPISQMLKTLVALRHTIDQSAA*
Ga0062594_1000466202	3300005093	Soil	MSSLDPSQLERCLASLNHLCESLPECDAKGKLRGKLGRLQAAIADYKRDGYVGPVTHELSGAHAIVQRFHDEEPISRMLQTLSALRHTIEQSAA*
Ga0062594_1028106121	3300005093	Soil	MAMSSLDPSQLERCLASLNHWCESLPECDAKGKLRGKLGRLQSAIADYKRDGHVGPVSLELSGAHAIVQRFHDEEPISRMLQALSALRDTIDQSAA*
Ga0065715_111470341	3300005293	Miscanthus Rhizosphere	MSAFDSSQLERGLASLNHLCESLPECDAKGKLRGKLGRLQAAIADYKRDGHLPPVCQELSGAHTIVQRFHDEEPISQMLQTLVALRHTI
Ga0065705_102834092	3300005294	Switchgrass Rhizosphere	MVALLILTTMDCQDFSQLERSIESLHHLCESLPECDAAGKLRGKLGRLQSAMADYKRDGDAGPLRQELSAAHAIVQRFHDAEPISRMLQTLSALRRTVEPPTV*
Ga0065705_110260371	3300005294	Switchgrass Rhizosphere	SSAIPPDGHSSCTVNLMAMSSLDPSQLERCLASLNHWCESLPECDAKGKLRGKLGRLQSAIADYKRDGHVGPVSLELSGAHAIVQRFHDEEPISRMLQTLSALRDTIDQSAA*
Ga0065707_100057355	3300005295	Switchgrass Rhizosphere	ANVTAMDREDLSQLERCIESLHHLCESLPECDAVGKLRGKLGRLQSAVADYKRDGDVGPLRQELSAAHGIVQHFHDADPLTRMLQTLSALRQSMDKPFAR*
Ga0065707_102075512	3300005295	Switchgrass Rhizosphere	MSSLDPSQLERCLASLNHWCESLPECDAKGKLRGKLGRLQSAIADYKRDGHVGPVSLELSGAHAIVQRFHDEEPISRMLQTLSALRDTIDQSAA*
Ga0070676_100885973	3300005328	Miscanthus Rhizosphere	LHPEFDGMSAFDSSQLERGLASLNHLCESLPECDAKGKLRGKLGRLQAAIADYKRDGHLPPVCQELSGAHTIVQRFHDEEPISQMLQTLVALRHTIDQSPA*
Ga0066388_1020438782	3300005332	Tropical Forest Soil	MSSLDPSQLERCLASLNHLCESLPECDAKGKLRGKLGRLQAAIADYKRDGHVGPVTHEVSGAHAIVQRFHDEEPISRMLQALSALRHTIERSAA*
Ga0068869_1003525312	3300005334	Miscanthus Rhizosphere	HLCESLPECDAKGKLRGKLGRVQSAIADYKRDGHLRPLCQELSGAQTIVQRFHDEEPISQMLKTLVALRHTIDQSAP*
Ga0070666_107693442	3300005335	Switchgrass Rhizosphere	MSAFDSSQLERGLASLNHLCESLPECDAKGKLRGKLGRLQAAIADYKRDGHLPPVCQELSGAHTIVQRFHDEEPISRMLQTLSALRHTIEQSAA*
Ga0070680_1009399892	3300005336	Corn Rhizosphere	MSAFDSSQLERGLASLNHLCESLPECDAKGKLRGKLGRLQAAIADYKRDGQVGPVTHEVSGAHAIVQRFHDEEPISRMLQTLS
Ga0068868_1005734552	3300005338	Miscanthus Rhizosphere	MSSLDPSQLERCLASLNHLCESLPECDAKGKLRGKLGRVQSAIADYKRDGHLRPLCQELSGAQTIVQRFHDEEPISQMLKTLVALRHTIDQSPA*
Ga0070660_1009952321	3300005339	Corn Rhizosphere	GIRVALSFTAMSSLDPSQLERCLASLNHLCESLPECDAKGKLRGKLGRVQSAIADYKRDGHLRPLCQELSGAQTIVQRFHDEEPISQMLKTLVALRHTIDQSAA*
Ga0070689_1007000592	3300005340	Switchgrass Rhizosphere	MSSLDPSQLERYLASLNHLCESLPECDAKGKLRGKLGRLQAAIADYKRDGHVGPVTHEVSGAHAIVQRFHDEEPISRMLQTLSALRHTIEQSAV*
Ga0070691_104973382	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	MSSLDPSQLERCLASLNHLCESLPECDAKGKLRGKLGRLQAAIADYKRDGYVGPVTHELSGAHAIVQRFHDEEPIS
Ga0070687_1004937351	3300005343	Switchgrass Rhizosphere	MSSLDPSQLERCLASLNHLCESLPECDAKGKLRGKLGRLQAAIADYKRDGHLPPVCQELSGAHTIVQRFHDEEPISQMLQTLVALRHTIDQSPA*
Ga0070675_1022362372	3300005354	Miscanthus Rhizosphere	MSSLDPSQLERCLASLNHWCESLPECDAKGKLRGKLGRLQSAIADYKRDGHVGPVSLELSGAHAIVQRFHDEEPISRM
Ga0070674_1013019012	3300005356	Miscanthus Rhizosphere	VLHCHLTAMSSLDPSQLERCLASLNHLCESLPECDAKGKLRGKLGRVQSAIADYKRDGHLRPLCQELSGAQTIVQRFHDEEPISQMLKTLVALRHTIDQSAA*
Ga0070688_1001179161	3300005365	Switchgrass Rhizosphere	NHLCESLPECDAKGKLRGKLGRVQSAIADYKRDGHLRPLCQELSGAQTIVQRFHDEEPISQMLKTLVALRHTIDQSAA*
Ga0070688_1008811912	3300005365	Switchgrass Rhizosphere	MSAFDSSQLERGLASLNHLCESLPECDAKGKLRGKLGRLQAAIADYKRDGHLPPVCQELSGAHTIVQRFHDEEPISQML
Ga0070659_1004476722	3300005366	Corn Rhizosphere	MSSLDPSQLERCLASLNHLCESLPECDAKGKLRGKLGRLQTAIADYKRDGHVAPVSQELTGAHALVQRFHDEEPISRMLQTLVALRHTLERSAA*
Ga0070703_105558161	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	MAMSSLDPSQLERCLSSLNHWCESLPECDAKGKLRGKLGRLQSAIADYKRDGHVGPVSLELSGAHAIVQRFHDEEPISRMLQTLSALRDTIDQSAA*
Ga0070701_100017128	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	MSSLDPSQLERCLASLNHLCESLPECDAKGKLRGKLGRVQSAIADYKRDGHLRPLCQELSGAQTIVQRFHDEEPISQML
Ga0070701_113154211	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	MSAFDSSQLERGLASLNHLCESLPECDAKGKLRGKLGRLQAAIADYKRDGHLPPVCQELSGAHTIVQRFHDEEPISQMLQTLVALRHTIDQ
Ga0070700_1008182242	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	AMSSLDPSQLERCLASLNHWCESLPECDAKGKLRGKLGRLQSAIADYKRDGHVGPVSLELSGAHAIVQRFHDEEPISRMLQTLSALRDTIDQSAA*
Ga0070678_1019891071	3300005456	Miscanthus Rhizosphere	VAVSSLDPSQLERYLASLNHLCESLPECDAKGKLRGKLGRLQAAIADYKRDGHVGPVTHEVSGAHAIVQRFHDEEPISRMLQTLSALRHTIEQSAV*
Ga0070685_104127352	3300005466	Switchgrass Rhizosphere	NHLCESLPECDAKGKLRGKLGRLQAAIADYKRDGYVGPVTHELSGAHAIVQRFHDEEPISRMLQTLSALRHTIEQSAA*
Ga0070707_1021132821	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MSSLDPSQLERCLASLNHLCESLPECDAKGKLRGKLGRLQAAIADYKRDGHVGPVTHEVSGAHAIVQRFHDEEPISRMLQTLSALRHTIEQSAA*
Ga0070698_1015635482	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MSSLDPSQLERCLASLNHLCESLPECDAKGKLRGKLGRVQSAIADYKRDGHLRPLCQELSGAQTIVQRFHDEEPISRM
Ga0073909_103486141	3300005526	Surface Soil	IASLNGLCDSLPECDAKGKLRGKLGRLQAAVAEYKGDGDIAPLVQALSVAHGIVQRFHDAEPLTQILETLSALRRTVEQPAPRRLRTLP*
Ga0070679_1018931961	3300005530	Corn Rhizosphere	QLERGLASLNHLCESLPECDAKGKLRGKLGRLQAAIADYKRDGHLPPVCQELSGAHTIVQRFHDEEPISQMLQTLVALRHTIDQSPA*
Ga0070672_1001688241	3300005543	Miscanthus Rhizosphere	MSSLDPSQLERYLASLNHLCESLPECDAKGKLRGKLGRLQAAIADYKRDGHVGPVTYELSGAHAIVQRFHDEEPISRMLQTLSALRHT
Ga0070704_1022263502	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	MSAFDSSQLERGLASLNHLCESLPECDAKGKLRGKLGRLQAAIADYKRDGHLPPVCQELSGAHTIVQRFHDEEPISQMLQT
Ga0068857_1015923742	3300005577	Corn Rhizosphere	MSSLDPSQLERCLASLNHLCESLPECDAKGKLRGKLGRLQAAIADYKRDGHVGPVAHELSGAHAIVQRFHDEEPISRMLQTLSALRHTIEQSAA*
Ga0066905_1003385112	3300005713	Tropical Forest Soil	MNSVDPSQLECCLASLNHLCESLPECDAKGKLRGKLGRLQSAVADYKRDGHVDPVCQELSAAHALVQRFHDAEPISRMLQAVSALRRTIEEPAA*
Ga0068863_1005301122	3300005841	Switchgrass Rhizosphere	VNLMAMSSLDPSQLERCLASLNHWCESLPECDAKGKLRGKLGRLQSAIADYKRDGHVGPVSLELSGAHAIVQRFHDEEPISRMLQTLSALRDTIDQSAA*
Ga0068858_1000650761	3300005842	Switchgrass Rhizosphere	GIARELSDSTRWAFVLHCHLTAMSSLDPSQLERCLASLNHLCESLPECDAKGKLRGKLGRLQAAIADYKRDGYVGPVTHELSGAHAIVQRFHDEEPISRMLQTLSALRHTIEQSAA*
Ga0075428_1000362384	3300006844	Populus Rhizosphere	MNSVDPSQLERCVASLNHLCESLPECDAKGKLRGKLGRLQSAVADYKRDGHVDPVCQELRAAHALVQRFHDAEPISRMLQALSALRRTIEEPAA*
Ga0075428_1001141774	3300006844	Populus Rhizosphere	MSSFDPSHLERCLASLNHLCESLPECDAKGKLRGKLGRVQSAIADYKRDGHLRPLCQELSGAHTIVQRFHDEEPISQMLKTLVALRHTIDQSAA*
Ga0075434_1004920452	3300006871	Populus Rhizosphere	MDRQQLLQLERSVDSLHHLCESLPECDAVGKLRGKLGRLRSAIDDYKRDGDVGPFRQELSAAHAIVQRFHDADPLNRMLQTVSELRRTIDNHPRR*
Ga0075429_1000364313	3300006880	Populus Rhizosphere	MNSVDPSQLERCVASLNHLCESLPECDAKGKLRGKLGRLQSAVADYKRDGHVDPVCQELRAAHALVQRFHDAEPISRMLQALSALRRTIEQTAA*
Ga0075429_1000599542	3300006880	Populus Rhizosphere	MSSFDPSHLERCLASLNHLCESLPECDAKGKLRGKLGRVQSAIADYKRDGHLRPLCQELSGAQTIVQRFHDEEPISQMLKTLVALRHTIDQSAA*
Ga0068865_1005895952	3300006881	Miscanthus Rhizosphere	CESLPECDAKGKLRGKLGRLQSAIADYKRDGHVGPVSLELSGAHAIVQRFHDEEPISRMLQTLSALRDTIDQSAA*
Ga0075419_100330031	3300006969	Populus Rhizosphere	MSSFDPSHLERCLASLNHLCESLPECDAKGKLRGKLGRVQSAIADYKRDGHLRPLCQELSGAHTIVQRFHDEEPISQMLKTLVALRHTIDQSAP*
Ga0075419_111458322	3300006969	Populus Rhizosphere	ALIRCGMNSVDPSQLERCVASLNHLCESLPECDAKGKLRGKLGRLQSAFADYKRDGHVDPVCQELRAAHALVQRFHDAEPISRMLQALSALRRTIEEPAA*
Ga0075435_1020553421	3300007076	Populus Rhizosphere	MNSPDPSQLERCLASLNHLCESLPECDAKGKLRGKLGRLQTAIADYKRDGHVAPVSQELTGAHALVQRFHDEEPISRMLQTLVALRHTIERSAA*
Ga0111539_100325865	3300009094	Populus Rhizosphere	MGIRVALSFTAMSSLDPSQLERCLASLNHLCESLPECDAKGKLRGKLGRVQSAIADYKRDGHLRPLCQELSGAQTIVQRFHDEEPISQMLKTLVALRHTIDQSAA*
Ga0111539_116584072	3300009094	Populus Rhizosphere	MNSLDPSHLERCIASLNHLCESLPECDAKGKLRGKLGRVQSAAADYNDNGDLGVLRQELSAAQALVERFHDAEPISRMLQALSALRRTIEEPAA*
Ga0111539_134875352	3300009094	Populus Rhizosphere	MNSPDPSQLERCLASLNHLCESLPECDAKGKLRGKLGRLQTAIADYKRDGHVAPVSQELTGAHALVQRFHDEEPISRMLQTLVALR
Ga0105245_114167172	3300009098	Miscanthus Rhizosphere	SERTTISSHFGIARELSDSTRWAFVLHCHLTAMSSLDPSQLERCLASLNHLCESLPECDAKGKLRGKLGRLQAAIAEYKRDGYVGTVTHELNGAHAIVQRFHDEEPISRMLQTLSALRHTIEQSAA*
Ga0114129_100132402	3300009147	Populus Rhizosphere	MNSVDPSQLERCVASLNHLCESLPECDAKGKLRGKLGRLQSAVADYKRDGHVDPVCQELRAAHALVQRFHDAEPISRMLQALSAVRRTIEEPAA*
Ga0114129_100135616	3300009147	Populus Rhizosphere	MVALLILTTMDCQDFSQLERSIESLHHLCESLPECDAAGKLRGKLGRLQSAMADYQRDGDAGPLRQELSAAHAIVQRFHDAEPISRMLQTLSALRRTVEPPTV*
Ga0114129_111300482	3300009147	Populus Rhizosphere	MDRQQLLQLERSVDSLHHLCESLPECDAVGKLRGKLGRLRSAIDDYKRDGDAGPFRQELSAAHAIVQRFHDADPLNRMLQTVSELRRTIDNHPRR*
Ga0111538_101229864	3300009156	Populus Rhizosphere	MSAFDSSQLERGLASLNHLCESLPECDAKGKLRGKLGRLQAAIADYKRDGQLPPVCQELSGAHTIVQRFHDEEPISQMLQTLVALRHTIDQSPA*
Ga0111538_106492072	3300009156	Populus Rhizosphere	MSSLDPSHLERCIASLNHLCESLPECDAKGKLRGKLGRVQSAAADYNDNGDLGVLRQELSAAQALVERFHDAEPISRMLQALSALRRTIEQPTA*
Ga0075423_100836333	3300009162	Populus Rhizosphere	MNSVDPSQLERCVASLNHLCESLPECDAKGKLRGKLGRLQSAVADYKRDGHVDPVCQELRAAHALVQRFHDAEPISRMLQALSAMRRTIEEPAA*
Ga0126384_112278971	3300010046	Tropical Forest Soil	MNSVDPSQLERCLASLNHLCESLPECDAKGKLRGKLGRLQSAVADYKRDGQVDPVCQELSAAHALVQRFHDAEPISRMLQAVSALRRTIEEPAA*
Ga0126384_119055531	3300010046	Tropical Forest Soil	MDRQQLVQLERFVESLHHLCESLPECDAVGKLRGKLGRLRSAIDDYKRDGDAAPFRQELSAAHAIVQRFHDADPLNQMLQTVSELRRTIDKHPRR*
Ga0126382_100556202	3300010047	Tropical Forest Soil	MNSVDPSQLECCLASLNHLCESLPECDAKGKLRGKLGRLQSAVADYKRDGHVDPVRQELSAAHALVQRFHDAEPISRMLQAVSALRRTIEEPAA*
Ga0126382_113514302	3300010047	Tropical Forest Soil	NQMGIRVALSFGGNRCLQPSELASQLPLRIAFGKLRGKLGRLQAAIADYKRDGHMGPVTHEVSGAHAIVQRFHDEEPISRMLQTLSALRHTIEQSAV*
Ga0126372_104168762	3300010360	Tropical Forest Soil	MAFELQCQSTAMNSLDPSQLERCLASLNHLCESLPECDAKGKLRGKLGRLQSAVADYKRDGHVGPLSQELSGAHSMVQRFHDAEPISRMLQALAALRHTVEQSAA*
Ga0126372_115526332	3300010360	Tropical Forest Soil	MNSVDPSQLERCLASLNHLCESLPECDAKGKLRGKLGRLQSAVADYKRDGHVDPVCQELSAAHALVQRFHDADPLSRMLETLATLRRTMDKSVA*
Ga0126377_109024232	3300010362	Tropical Forest Soil	MTSLDPSQLERCLASLNHWCESLPECDAKGKLRGKLGRLQSAIADYKRDGHVGPVSLELSGAHDIVQRFHDEEPISRMLQTLSALRLTIEQSAA
Ga0134128_119019551	3300010373	Terrestrial Soil	MNSPDTSQLERCLASLNHLCESLPECDAKGKLRGKLGRLQTAIADYKRDGHVAPVSQELTGAHALVQRFHDEEPISRMLQTLVALRHTLERSAA*
Ga0134127_100386204	3300010399	Terrestrial Soil	MDAHDLSQLERCIESLHHLCESLPECDAVGKLRGKLGRLQSAMADYKRDGDARPLRQEVSAAHAIVQRFHDADPLNRMLETLSALQRTMEQPLA*
Ga0134127_124120191	3300010399	Terrestrial Soil	MGIRVALSIDGMSAFDPSQLERGLASLNHLCESLPECDAKGKLRGKLGRLQAAIADYKRDGHLPPVCQELSGAHTIVQRFHDEEPISQMLQTLVALRHTIDQSPA*
Ga0126375_101404012	3300012948	Tropical Forest Soil	MSSLDPSQLERCLASLNHLCESLPECDAKGKLRGKLGRLQAAIADYKRDGHVGPVTHELSGAHAIVQRFHDEEPISRMLQTLSALRHTIEQSAV*
Ga0126375_104677591	3300012948	Tropical Forest Soil	MDRQDLSQLERSLESLHTLCESLPECDAVGKLRGKLGRLQSAMADYKRDGDAGPLRQELSAALGIVQRFHDADPLSRMLETLATLRRTMDKSVA*
Ga0157373_106298462	3300013100	Corn Rhizosphere	MNSPDPSQLERCLASLNHLCESLPECDAKGKLRGKLGRLQTAIADYKRDGHVAPVSQELTGAHALVQRFHDEEPISRMLQTLVALRHTLERSAA*
Ga0157371_111268211	3300013102	Corn Rhizosphere	RFHQMGIRVALSFTAMSSLDPSQLERCLASLNHLCESLPECDAKGKLRGKLGRVQSAIADYKRDGHLRPLCQELSGAQTIVQRFHDEEPISQMLKTLVALRHTIDQSAA*
Ga0157374_107742391	3300013296	Miscanthus Rhizosphere	MSSLDPSQLERCLASLNHLCESLPECDAKGKLRGKLGRLQAAIADYKRDGYVGPVTHELSGAHAIVQRFHDEEPISRMLQTLSALRDTIDQSAA*
Ga0163163_133160852	3300014325	Switchgrass Rhizosphere	QLERYLASLNHLCESLPECDAKGKLRGKLGRLQAAIADYKRDGHVGPVTHEVSGAHAIVQRFHDEEPISRMLQTLSALRHTIEQSAV*
Ga0157377_100499403	3300014745	Miscanthus Rhizosphere	SLNHLCESLPECDAKGKLRGKLGRLQAAIADYKRDGHLPPVCQELSGAHTIVQRFHDEEPISQMLQTLVALRHTIDQSPA*
Ga0157379_114043902	3300014968	Switchgrass Rhizosphere	MGIRVALSFTAMSSLDPSQLERCLASLNHLCESLPECDAKGKLRGKLGRLQAAIADYKRDGYVGPVTHELSGAHAIVQRFHDEEPISRMLQTLSALRHTIEQSAA*
Ga0157376_102273042	3300014969	Miscanthus Rhizosphere	MSSLDPSQLERYLASLNHLCESLPECDAKGKLRGKLGRLQAAIADYKRDGYLGPVTHELSGAHAIVQRFHDEEPISRMLQTLSALRHTIEQSAA*
Ga0132258_100405977	3300015371	Arabidopsis Rhizosphere	MDREELSQLERCIESLHHLCESLPECDAVGKLRGKLGRLQSAMADYKRDGDAGPLRQELSAAHGIVRHFHDADPLTRMLQTLSALRQSMDKPFAR*
Ga0132258_131265002	3300015371	Arabidopsis Rhizosphere	MAMSSLDPSQLERCLASLNHWCESLPECDAKGKLRGKLGRLQSAIADYKRDGHVGPVSLELSGAHAIVQRFHDEEPISRMLQTLSALRDTIDQSAA*
Ga0132256_1000626673	3300015372	Arabidopsis Rhizosphere	MSSLDPSQLERCLASLNHLCESLPECDAKGKLRGKLGRLQAAIADYERDGHVGPLTHELNGAHAIVQRFHDEEPISRMLQTLSALRHTIEQSAV*
Ga0132256_1025146352	3300015372	Arabidopsis Rhizosphere	MAAMSSLDPSQLERCLASLNDLCESLPECDAKGKLRGKLGRLQAAIADYKRDGYVGPVTHELSGAHAIVQRFHDEEPISRMLQTLSALRHTIEQSAA*
Ga0132255_1000303165	3300015374	Arabidopsis Rhizosphere	MDREELSQLERCIESLHHLCESLPECDAVGKLRGKLGRLQSAMADYKRDGDAGPLRQELSAAHGIVQHFHDADPLTRMLQTLSALRQSMDKPFAR*
Ga0132255_1063055152	3300015374	Arabidopsis Rhizosphere	MDRQSLSRLERSIELLHHLCETLPECDAAGKLRGKLGRLQSAMADYKRNGDAGPLREELSAAHAIVQRFHDTEPISRMLQTLSALRRTIDQPVA*
Ga0210139_10439282	3300025558	Natural And Restored Wetlands	PVTNRASRRDLSDTIKTGIRVALTVKRMNSVDPLQLERCLASLNQLCESLPECDAKGKLRGKLGRLQSAVADYKRDGHVDPVCQELSAAHALVQRFHDAEPISRMLQALSALRRTTEEPA
Ga0207682_100419643	3300025893	Miscanthus Rhizosphere	MSSLDPSQLERYLASLNHLCESLPECDAKGKLRGKLGRLQAAIADYKRDGHVGPVTHEVSGAHAIVQRFHDEEPISRMLQTLSALRHTIEQSAV
Ga0207688_106324622	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	MSSLDPSQLERCLASLNHLCESLPECDAKGKLRGKLGRLQAAIADYKRDGYVGPVTHELSGAHAIVQRFHDEEPISQMLQTLVALRHTIDQSPA
Ga0207647_107356391	3300025904	Corn Rhizosphere	MSSLDPSQLERCLASLNHLCESLPECDAKGKLRGKLGRVQSAIADYKRDGHLRPLCQELSGAQTIVQRFHDEEPISQMLKTLVALRHTIDQSAA
Ga0207645_100762682	3300025907	Miscanthus Rhizosphere	MSSLDPSQLERCLASLNHLCESLPECDAKGKLRGKLGRLQAAIADYKRDGHLPPVCQELSGAHTIVQRFHDEEPISQMLKTLVALRHTIDQSAP
Ga0207643_100043105	3300025908	Miscanthus Rhizosphere	MSAFDSSQLERGLASLNHLCESLPECDAKGKLRGKLGRLQAAIADYKRDGHLPPVCQELSGAHTIVQRFHDEEPISQMLQTLVALRHTIDQSPA
Ga0207660_105751372	3300025917	Corn Rhizosphere	MNSPDPSQLERCLASLNHLCESLPECDAKGKLRGKLGRLQAAIADYKRDGYVGPVTHELSGAHAIVQRFHDEEPISQMLKTLVALRHTIDQSAA
Ga0207662_100256721	3300025918	Switchgrass Rhizosphere	MSSLDPSQLERCLASLNHLCESLPECDAKGKLRGKLGRLQAAIADYKRDGYVGPVTHELSGAHAIVQRFHDEEPISRMLQTLSALRHTIEQSAA
Ga0207657_109981102	3300025919	Corn Rhizosphere	LASLNHLCESLPECDAKGKLRGKLGRVQSAIADYKRDGHLRPLCQELSGAQTIVQRFHDEEPISQMLKTLVALRHTIDQSAA
Ga0207659_104840852	3300025926	Miscanthus Rhizosphere	MSSLDPSQLERCLASLNHWCESLPECDAKGKLRGKLGRLQSAIADYKRDGHVGPVSLELSGAHAIVQRFHDEEPISRMLQTLSALRDTIDQSAA
Ga0207706_100183515	3300025933	Corn Rhizosphere	MSSLDPSQLERCLASLNHLCESLPECDAKGKLRGKLGRLQAAIADYKRDGHLPPVCQELSGAHTIVQRFHDEEPISQMLKTLVALRHTIDQSAA
Ga0207709_115395652	3300025935	Miscanthus Rhizosphere	MSSLDPSQLERCLASLNHLCESLPECDAKGKLRGKLGRLQAAIADYKRDGYVGPVTHELSGAHAIVQRFHDEEPISRMLQT
Ga0207669_117010632	3300025937	Miscanthus Rhizosphere	LHCHLVAMSSLDPSQLERYLASLNHLCESLPECDAKGKLRGKLGRLQAAIADYKRDGHVGPVTHEVSGAHAIVQRFHDEEPISRMLQTLSALRHTIEQSAV
Ga0207711_114221742	3300025941	Switchgrass Rhizosphere	ALSFTAMSSLDPSQLERCLASLNHLCESLPECDAKGKLRGKLGRLQAAIADYKRDGYVGPVTHEVSGAHAIVQRFHDEEPISRMLQTLSALRHTIEQSAA
Ga0207689_110369281	3300025942	Miscanthus Rhizosphere	HLCESLPECDAKGKLRGKLGRVQSAIADYKRDGHLRPLCQELSGAHTIVQRFHDEEPISQMLKTLVALRHTIDQSAP
Ga0207667_118306471	3300025949	Corn Rhizosphere	SISSHFGIARELSDSTRWAFVLHCHLTAMSSLDPSQLERCLASLNHLCESLPECDAKGKLRGKLGRLQAAIADYKRDGYVGPVTHELSGAHAIVQRFHDEEPISQMLKTLVALRHTIDQSAA
Ga0207658_111325742	3300025986	Switchgrass Rhizosphere	MSSLDPSQLERCLASLNHLCESLPECDAKGKLRGKLGRLQAAIADYKRDGYLGPVTHELSGAHAIVQRFHDEEPISRMLQTLSALRHTIEQSAA
Ga0207708_107155572	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	VNLMAMSSLDPSQLERCLASLNHWCESLPECDAKGKLRGKLGRLQSAIADYKRDGHVGPVSLELSGAHAIVQRFHDEEPISRMLQTLSALRDTIDQSAA
Ga0207641_110731792	3300026088	Switchgrass Rhizosphere	TSISSHFGIARELSDSTRWAFVLHCHLTAMSSLDPSQLERCLASLNHLCESLPECDAKGKLRGKLGRLQAAIADYKRDGYVGPVTHELSGAHAIVQRFHDEEPISRMLQTLSALRHTIEQSAA
Ga0207648_102211381	3300026089	Miscanthus Rhizosphere	MSSLDPSQLERCLASLNHLCESLPECDAKGKLRGKLGRLQAAIADYKRDGYVGPVTHELSGAHAIVQRFHDEEPISQMLQTLVALRHTIDQSAA
Ga0207676_100418493	3300026095	Switchgrass Rhizosphere	MSSLDPSQLERCLASLNHLCESLPECDAKGKLRGKLGRVQSAIADYKRDGHLRPLCQELSGAHTIVQRFHDEEPISQMLKTLVALRHTIDQSAA
Ga0207676_102581153	3300026095	Switchgrass Rhizosphere	LDPSQLERCLASLNHLCESLPECDAKGKLRGKLGRLQAAIADYKRDGYVGPVTHELSGAHAIVQRFHDEEPISRMLQTLSALRHTIEQSAA
Ga0207674_103448593	3300026116	Corn Rhizosphere	MSSLDPSQLERCLASLNHLCESLPECDAKGKLRGKLGRLQAAIADYKRDGYVGPVTHELSGAHAIVQRFHDEEPISRM
Ga0207683_118376261	3300026121	Miscanthus Rhizosphere	MNSPDTSQLERCLASLNHLCESLPECDAKGKLRGKLGRLQSAIADYKRDGHVGPVSLELSGAHAIVQRFHDEEPISRMLQTLSALRDTIDQSAA
Ga0207428_101415922	3300027907	Populus Rhizosphere	MSSFDPSHLERCLASLNHLCESLPECDAKGKLRGKLGRVQSAIADYKRDGHLRPLCQELSGAHTIVQRFHDEEPISQMLKTLVALRHTIDQSAP
Ga0310887_104626642	3300031547	Soil	MSSLDPSQLERCLASLNHWCESLPECDAKGKLRGKLGRVQSAIADYKRDGHLRPLCQELSGAQTIVQRFHDEEPISQMLKTLVALRHTIDQSAA
Ga0307469_115878381	3300031720	Hardwood Forest Soil	MDSLDLSYLERCIASLHHLCESLPECDAAGKLRGKLGRLQSAMADYKRDGDAGPLRQELSAAHGMVQRFHDAEPISRMLQALFALRRTVE
Ga0307468_1008704941	3300031740	Hardwood Forest Soil	ASLNGLCDSLPECDAKGKLRGKLGRLQAAVAEYKGDGDIEPLVQELSVAHGIVQRFHDAEPLTQMLETLSALRRTVEQPAPRRLRTRP
Ga0307468_1019774231	3300031740	Hardwood Forest Soil	MDSPDSSQLERDIASLNQLCESLPECDAVGKLRGKLGRVQSAMADYKRDGNAGPLRQELRAAHAIVQRFHDAEPISRMLQTLSALRRTVEQPTV
Ga0310885_105749191	3300031943	Soil	LGAAGASSAIPPDGHSSCTVNLMAMSSLDPSQLERCLASLNHLCESLPECDAKGKLRGKLGRVQSAIADYKRDGHLRPLCQELSGAQTIVQRFHDEEPISQMLKTLVALRHTIDQSAA
Ga0307471_1017015681	3300032180	Hardwood Forest Soil	MNSVDPSQLERSLASLNHLCESLPECDAKGKLRGKLGRLQSAIADYKRDGHVDPVCQELSAAHALVQHFHDAEPISRMLQALSALRRTIEEPVA
Ga0307471_1017651842	3300032180	Hardwood Forest Soil	MDPSQLERCLASLNHLCESLPECDAKGKLRGKLGRLQSAIADYTRDGHVGPVCQELSAAHALVQRFHDAEPISRMLHTLSALRRTIEEPAA
Ga0310896_107732252	3300032211	Soil	GHSSCTVNLMAMSSLDPSQLERCLASLNHWCESLPECDAKGKLRGKLGRLQSAIADYKRDGHVGPVSLELSGAHAIVQRFHDEEPISRMLQTLSALRDTIDQSAA
Ga0310810_107956341	3300033412	Soil	MSSLDPSQLERCLASLNHLCESLPECDAKGKLRGKLGGLQAAIADYKRDGQVAPVTHEVSGAHAIVRRFHDEEPISRMLQTLSALRHTIEQSAA
Ga0373948_0045435_348_638	3300034817	Rhizosphere Soil	MAMSSLDPSQLERCLASLNHWCESLPECDAKGKLRGKLGRLQSAIADYKRDGHVGPVSLELSGAHAIVQRFHDEEPISRMLQTLSALRDTIDQSAA

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.73
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.73
Powered by PDBe Molstar

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F061387

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign