NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F061362

Metagenome Family F061362

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F061362
Family Type Metagenome
Number of Sequences 132
Average Sequence Length 67 residues
Representative Sequence MRVTLTDEQHLMLELIADKPLPAIPEIARYTSVLAAARLIELTAESRWTLTRRGEAMLEPRGYWVH
Number of Associated Samples 93
Number of Associated Scaffolds 132

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 64.39 %
% of genes near scaffold ends (potentially truncated) 34.85 %
% of genes from short scaffolds (< 2000 bps) 95.45 %
Associated GOLD sequencing projects 86
AlphaFold2 3D model prediction Yes
3D model pTM-score0.73

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (58.333 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere
(20.454 % of family members)
Environment Ontology (ENVO) Unclassified
(28.030 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(57.576 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 32.98%    β-sheet: 9.57%    Coil/Unstructured: 57.45%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.73
Powered by PDBe Molstar

Structural matches with SCOPe domains

SCOP familySCOP domainRepresentative PDBTM-score
a.4.5.0: automated matchesd5ffxa_5ffx0.85795
a.4.5.84: Rps19E-liked2v7fa12v7f0.85731
a.4.5.28: MarR-like transcriptional regulatorsd1jgsa_1jgs0.84814
a.4.5.0: automated matchesd6pcoa_6pco0.84128
a.4.5.28: MarR-like transcriptional regulatorsd2fxaa12fxa0.8399

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 132 Family Scaffolds
PF00072Response_reg 6.06
PF00196GerE 4.55
PF00872Transposase_mut 3.03
PF13586DDE_Tnp_1_2 2.27
PF13340DUF4096 2.27
PF13581HATPase_c_2 2.27
PF13414TPR_11 1.52
PF05988DUF899 0.76
PF13730HTH_36 0.76
PF01609DDE_Tnp_1 0.76
PF13188PAS_8 0.76
PF00296Bac_luciferase 0.76
PF12770CHAT 0.76
PF03928HbpS-like 0.76
PF06508QueC 0.76
PF03466LysR_substrate 0.76
PF12762DDE_Tnp_IS1595 0.76
PF00903Glyoxalase 0.76

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 132 Family Scaffolds
COG3328Transposase (or an inactivated derivative)Mobilome: prophages, transposons [X] 3.03
COG0037tRNA(Ile)-lysidine synthase TilS/MesJTranslation, ribosomal structure and biogenesis [J] 0.76
COG0137Argininosuccinate synthaseAmino acid transport and metabolism [E] 0.76
COG0171NH3-dependent NAD+ synthetaseCoenzyme transport and metabolism [H] 0.76
COG0301Adenylyl- and sulfurtransferase ThiI (thiamine and tRNA 4-thiouridine biosynthesis)Translation, ribosomal structure and biogenesis [J] 0.76
COG0482tRNA U34 2-thiouridine synthase MnmA/TrmU, contains the PP-loop ATPase domainTranslation, ribosomal structure and biogenesis [J] 0.76
COG0519GMP synthase, PP-ATPase domain/subunitNucleotide transport and metabolism [F] 0.76
COG06037-cyano-7-deazaguanine synthase (queuosine biosynthesis)Translation, ribosomal structure and biogenesis [J] 0.76
COG0780NADPH-dependent 7-cyano-7-deazaguanine reductase QueF, C-terminal domain, T-fold superfamilyTranslation, ribosomal structure and biogenesis [J] 0.76
COG1606ATP-utilizing enzyme, PP-loop superfamilyGeneral function prediction only [R] 0.76
COG2141Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)Coenzyme transport and metabolism [H] 0.76
COG3039Transposase and inactivated derivatives, IS5 familyMobilome: prophages, transposons [X] 0.76
COG3293TransposaseMobilome: prophages, transposons [X] 0.76
COG3385IS4 transposase InsGMobilome: prophages, transposons [X] 0.76
COG4312Predicted dithiol-disulfide oxidoreductase, DUF899 familyGeneral function prediction only [R] 0.76
COG5421TransposaseMobilome: prophages, transposons [X] 0.76
COG5433Predicted transposase YbfD/YdcC associated with H repeatsMobilome: prophages, transposons [X] 0.76
COG5659SRSO17 transposaseMobilome: prophages, transposons [X] 0.76

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A58.33 %
All OrganismsrootAll Organisms41.67 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2199352025|deepsgr__Contig_35641Not Available716Open in IMG/M
3300000033|ICChiseqgaiiDRAFT_c2005346Not Available653Open in IMG/M
3300000363|ICChiseqgaiiFebDRAFT_13298297Not Available519Open in IMG/M
3300000363|ICChiseqgaiiFebDRAFT_13921457Not Available749Open in IMG/M
3300001431|F14TB_102177399Not Available610Open in IMG/M
3300001431|F14TB_104300909All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria646Open in IMG/M
3300004156|Ga0062589_101656939Not Available636Open in IMG/M
3300004157|Ga0062590_100222605All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1390Open in IMG/M
3300004463|Ga0063356_101897617Not Available898Open in IMG/M
3300004479|Ga0062595_100077194All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium1667Open in IMG/M
3300004479|Ga0062595_100312415All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae1068Open in IMG/M
3300004479|Ga0062595_101460816Not Available627Open in IMG/M
3300004480|Ga0062592_102367115All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria532Open in IMG/M
3300004643|Ga0062591_102635275All Organisms → cellular organisms → Bacteria530Open in IMG/M
3300005093|Ga0062594_101872850Not Available635Open in IMG/M
3300005093|Ga0062594_103142437Not Available517Open in IMG/M
3300005332|Ga0066388_101185806Not Available1303Open in IMG/M
3300005332|Ga0066388_101390389All Organisms → cellular organisms → Bacteria1218Open in IMG/M
3300005332|Ga0066388_101967878All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium1046Open in IMG/M
3300005332|Ga0066388_104418037All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae716Open in IMG/M
3300005341|Ga0070691_10699222All Organisms → cellular organisms → Bacteria608Open in IMG/M
3300005345|Ga0070692_11416716Not Available502Open in IMG/M
3300005347|Ga0070668_101235349Not Available678Open in IMG/M
3300005364|Ga0070673_100244407All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1562Open in IMG/M
3300005367|Ga0070667_102131119Not Available528Open in IMG/M
3300005441|Ga0070700_100550167All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium896Open in IMG/M
3300005441|Ga0070700_101765130Not Available532Open in IMG/M
3300005457|Ga0070662_100461137All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1056Open in IMG/M
3300005459|Ga0068867_101888251Not Available563Open in IMG/M
3300005549|Ga0070704_100243005Not Available1474Open in IMG/M
3300005577|Ga0068857_101887239All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Variibacter → Variibacter gotjawalensis585Open in IMG/M
3300005577|Ga0068857_102317289Not Available527Open in IMG/M
3300005615|Ga0070702_101195817Not Available612Open in IMG/M
3300005615|Ga0070702_101423856Not Available567Open in IMG/M
3300005718|Ga0068866_11169911Not Available554Open in IMG/M
3300005764|Ga0066903_106466663Not Available611Open in IMG/M
3300005841|Ga0068863_100285151All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1601Open in IMG/M
3300005841|Ga0068863_100731478Not Available985Open in IMG/M
3300005841|Ga0068863_100903123Not Available884Open in IMG/M
3300005842|Ga0068858_101036865Not Available804Open in IMG/M
3300005843|Ga0068860_100284316Not Available1617Open in IMG/M
3300005844|Ga0068862_100619527All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1041Open in IMG/M
3300006031|Ga0066651_10548528Not Available613Open in IMG/M
3300006057|Ga0075026_100700557Not Available605Open in IMG/M
3300006844|Ga0075428_100011919All Organisms → cellular organisms → Bacteria9671Open in IMG/M
3300006844|Ga0075428_100093304All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria3282Open in IMG/M
3300006844|Ga0075428_100187668All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales2236Open in IMG/M
3300006844|Ga0075428_100445611All Organisms → cellular organisms → Bacteria → Proteobacteria1387Open in IMG/M
3300006844|Ga0075428_101867133All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Variibacter → Variibacter gotjawalensis625Open in IMG/M
3300006844|Ga0075428_102193545Not Available570Open in IMG/M
3300006845|Ga0075421_100209590All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium2408Open in IMG/M
3300006847|Ga0075431_101625824Not Available603Open in IMG/M
3300006854|Ga0075425_102581564Not Available562Open in IMG/M
3300006871|Ga0075434_100620303All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1100Open in IMG/M
3300006880|Ga0075429_100213190All Organisms → cellular organisms → Bacteria1692Open in IMG/M
3300006969|Ga0075419_10362801Not Available987Open in IMG/M
3300007076|Ga0075435_100577981Not Available974Open in IMG/M
3300009011|Ga0105251_10248596Not Available801Open in IMG/M
3300009012|Ga0066710_101396090All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1085Open in IMG/M
3300009094|Ga0111539_10530453Not Available1371Open in IMG/M
3300009094|Ga0111539_12866062All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium558Open in IMG/M
3300009094|Ga0111539_13239937Not Available524Open in IMG/M
3300009094|Ga0111539_13356155Not Available515Open in IMG/M
3300009098|Ga0105245_10246325All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp. M1E.F.Ca.ET.041.01.1.11735Open in IMG/M
3300009100|Ga0075418_10874810Not Available971Open in IMG/M
3300009137|Ga0066709_100573187All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium1603Open in IMG/M
3300009137|Ga0066709_101521764Not Available964Open in IMG/M
3300009143|Ga0099792_11022092Not Available553Open in IMG/M
3300009156|Ga0111538_11658944Not Available805Open in IMG/M
3300009156|Ga0111538_12286326All Organisms → cellular organisms → Bacteria → Proteobacteria679Open in IMG/M
3300009156|Ga0111538_13040593All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales585Open in IMG/M
3300009174|Ga0105241_12603583All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales508Open in IMG/M
3300009545|Ga0105237_12519124All Organisms → cellular organisms → Bacteria → Proteobacteria525Open in IMG/M
3300009553|Ga0105249_10936258Not Available934Open in IMG/M
3300010358|Ga0126370_10338854Not Available1210Open in IMG/M
3300010359|Ga0126376_10518067All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae1108Open in IMG/M
3300010360|Ga0126372_11455197Not Available719Open in IMG/M
3300010397|Ga0134124_10842227Not Available919Open in IMG/M
3300010398|Ga0126383_10676817All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae1109Open in IMG/M
3300010400|Ga0134122_10378026Not Available1243Open in IMG/M
3300010401|Ga0134121_10326310Not Available1367Open in IMG/M
3300010403|Ga0134123_12950847Not Available544Open in IMG/M
3300010403|Ga0134123_13157991Not Available530Open in IMG/M
3300011119|Ga0105246_10509640Not Available1023Open in IMG/M
3300011119|Ga0105246_10832535All Organisms → cellular organisms → Bacteria822Open in IMG/M
3300012469|Ga0150984_111414509Not Available1548Open in IMG/M
3300012469|Ga0150984_123395189Not Available666Open in IMG/M
3300012951|Ga0164300_10310584Not Available829Open in IMG/M
3300012955|Ga0164298_10488825Not Available819Open in IMG/M
3300012955|Ga0164298_10527623Not Available795Open in IMG/M
3300012971|Ga0126369_11599378Not Available741Open in IMG/M
3300012984|Ga0164309_10608616Not Available854Open in IMG/M
3300012986|Ga0164304_11139864Not Available626Open in IMG/M
3300013297|Ga0157378_10279955Not Available1607Open in IMG/M
3300013297|Ga0157378_11537446Not Available710Open in IMG/M
3300014326|Ga0157380_11023445All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium861Open in IMG/M
3300014326|Ga0157380_11828068All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales667Open in IMG/M
3300015371|Ga0132258_11188655All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1928Open in IMG/M
3300015371|Ga0132258_12841352Not Available1205Open in IMG/M
3300018072|Ga0184635_10191185Not Available816Open in IMG/M
3300018433|Ga0066667_11666226All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium571Open in IMG/M
3300018469|Ga0190270_10387653All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Variibacter → Variibacter gotjawalensis1288Open in IMG/M
3300018476|Ga0190274_11066113Not Available886Open in IMG/M
3300018476|Ga0190274_11186310Not Available847Open in IMG/M
3300018482|Ga0066669_11719883Not Available577Open in IMG/M
3300025900|Ga0207710_10605245Not Available573Open in IMG/M
3300025927|Ga0207687_11164603Not Available662Open in IMG/M
3300025945|Ga0207679_11179857All Organisms → cellular organisms → Bacteria703Open in IMG/M
3300025960|Ga0207651_11061622Not Available725Open in IMG/M
3300026067|Ga0207678_10888643Not Available788Open in IMG/M
3300026075|Ga0207708_10657782All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium892Open in IMG/M
3300026075|Ga0207708_10994228Not Available729Open in IMG/M
3300027903|Ga0209488_10291693All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1219Open in IMG/M
3300027907|Ga0207428_10183209All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1581Open in IMG/M
3300027907|Ga0207428_10361619All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium1067Open in IMG/M
3300027909|Ga0209382_10013646All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria9983Open in IMG/M
3300027909|Ga0209382_10237187All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales2076Open in IMG/M
3300027909|Ga0209382_10480241All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1372Open in IMG/M
3300027909|Ga0209382_11246937Not Available757Open in IMG/M
3300028589|Ga0247818_10949121Not Available606Open in IMG/M
3300028592|Ga0247822_10926344All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium716Open in IMG/M
3300028592|Ga0247822_11155156Not Available645Open in IMG/M
3300028809|Ga0247824_10134852All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Variibacter → Variibacter gotjawalensis1320Open in IMG/M
3300028809|Ga0247824_10603939All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales659Open in IMG/M
3300028889|Ga0247827_10581494Not Available714Open in IMG/M
3300031740|Ga0307468_102290194Not Available525Open in IMG/M
3300031854|Ga0310904_10365168All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales935Open in IMG/M
3300031940|Ga0310901_10097528All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1055Open in IMG/M
3300031943|Ga0310885_10155491All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1097Open in IMG/M
3300032013|Ga0310906_10102280Not Available1574Open in IMG/M
3300032180|Ga0307471_102288973Not Available682Open in IMG/M
3300033551|Ga0247830_10897014All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium706Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere20.45%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil8.33%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil6.82%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere6.82%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil6.06%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere4.55%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil3.79%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil3.79%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil3.79%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil3.79%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil3.03%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere3.03%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere3.03%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere2.27%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere2.27%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil1.52%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil1.52%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil1.52%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere1.52%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere1.52%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere1.52%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere1.52%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.52%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere1.52%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere1.52%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment0.76%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds0.76%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.76%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere0.76%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2199352025Soil microbial communities from Rothamsted, UK, for project Deep Soil - DEEP SOILEnvironmentalOpen in IMG/M
3300000033Soil microbial communities from Great Prairies - Iowa, Continuous Corn soilEnvironmentalOpen in IMG/M
3300000363Soil microbial communities from Great Prairies - Iowa, Continuous Corn soilEnvironmentalOpen in IMG/M
3300001431Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemlyEnvironmentalOpen in IMG/M
3300004156Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1EnvironmentalOpen in IMG/M
3300004157Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2EnvironmentalOpen in IMG/M
3300004463Combined assembly of Arabidopsis thaliana microbial communitiesHost-AssociatedOpen in IMG/M
3300004479Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAsEnvironmentalOpen in IMG/M
3300004480Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4EnvironmentalOpen in IMG/M
3300004643Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3EnvironmentalOpen in IMG/M
3300005093Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All BlocksEnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005341Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaGEnvironmentalOpen in IMG/M
3300005345Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaGEnvironmentalOpen in IMG/M
3300005347Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaGHost-AssociatedOpen in IMG/M
3300005364Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaGHost-AssociatedOpen in IMG/M
3300005367Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaGHost-AssociatedOpen in IMG/M
3300005441Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaGEnvironmentalOpen in IMG/M
3300005457Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaGHost-AssociatedOpen in IMG/M
3300005459Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2Host-AssociatedOpen in IMG/M
3300005549Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaGEnvironmentalOpen in IMG/M
3300005577Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2Host-AssociatedOpen in IMG/M
3300005615Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaGEnvironmentalOpen in IMG/M
3300005718Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2Host-AssociatedOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300005841Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2Host-AssociatedOpen in IMG/M
3300005842Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2Host-AssociatedOpen in IMG/M
3300005843Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2Host-AssociatedOpen in IMG/M
3300005844Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2Host-AssociatedOpen in IMG/M
3300006031Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100EnvironmentalOpen in IMG/M
3300006057Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2012EnvironmentalOpen in IMG/M
3300006844Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2Host-AssociatedOpen in IMG/M
3300006845Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5Host-AssociatedOpen in IMG/M
3300006847Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5Host-AssociatedOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300006871Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3Host-AssociatedOpen in IMG/M
3300006880Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3Host-AssociatedOpen in IMG/M
3300006969Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3Host-AssociatedOpen in IMG/M
3300007076Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4Host-AssociatedOpen in IMG/M
3300009011Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaGHost-AssociatedOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009094Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009098Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaGHost-AssociatedOpen in IMG/M
3300009100Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2Host-AssociatedOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300009143Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2EnvironmentalOpen in IMG/M
3300009156Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009174Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaGHost-AssociatedOpen in IMG/M
3300009545Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaGHost-AssociatedOpen in IMG/M
3300009553Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaGHost-AssociatedOpen in IMG/M
3300010358Tropical forest soil microbial communities from Panama - MetaG Plot_3EnvironmentalOpen in IMG/M
3300010359Tropical forest soil microbial communities from Panama - MetaG Plot_15EnvironmentalOpen in IMG/M
3300010360Tropical forest soil microbial communities from Panama - MetaG Plot_6EnvironmentalOpen in IMG/M
3300010397Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4EnvironmentalOpen in IMG/M
3300010398Tropical forest soil microbial communities from Panama - MetaG Plot_35EnvironmentalOpen in IMG/M
3300010400Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2EnvironmentalOpen in IMG/M
3300010401Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1EnvironmentalOpen in IMG/M
3300010403Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3EnvironmentalOpen in IMG/M
3300011119Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaGHost-AssociatedOpen in IMG/M
3300012469Combined assembly of Soil carbon rhizosphereHost-AssociatedOpen in IMG/M
3300012951Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MGEnvironmentalOpen in IMG/M
3300012955Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MGEnvironmentalOpen in IMG/M
3300012971Tropical forest soil microbial communities from Panama - MetaG Plot_1EnvironmentalOpen in IMG/M
3300012984Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MGEnvironmentalOpen in IMG/M
3300012986Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MGEnvironmentalOpen in IMG/M
3300013297Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaGHost-AssociatedOpen in IMG/M
3300014326Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaGHost-AssociatedOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300018072Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2EnvironmentalOpen in IMG/M
3300018433Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116EnvironmentalOpen in IMG/M
3300018469Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 TEnvironmentalOpen in IMG/M
3300018476Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 TEnvironmentalOpen in IMG/M
3300018482Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118EnvironmentalOpen in IMG/M
3300025900Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025927Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025945Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025960Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026067Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026075Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027903Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)EnvironmentalOpen in IMG/M
3300027907Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)Host-AssociatedOpen in IMG/M
3300027909Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)Host-AssociatedOpen in IMG/M
3300028589Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day1EnvironmentalOpen in IMG/M
3300028592Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Cellulose_Day30EnvironmentalOpen in IMG/M
3300028809Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_PalmiticAcid_Day48EnvironmentalOpen in IMG/M
3300028889Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day2EnvironmentalOpen in IMG/M
3300031740Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05EnvironmentalOpen in IMG/M
3300031854Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1EnvironmentalOpen in IMG/M
3300031940Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D2EnvironmentalOpen in IMG/M
3300031943Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D2EnvironmentalOpen in IMG/M
3300032013Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300033551Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
deepsgr_002379902199352025SoilMGRFEMRITLTDEQHLMLELIADKPLPAIPEIARYTGVLAAARLIELTAESRWTLTSRGEAMLEPRGYWMN
ICChiseqgaiiDRAFT_200534623300000033SoilMRVTLTDEQQLMLELISERSLPAIPEIARYTSALSAARLIELTADKRWKVTRRGKAMLVPIEPHGCWVH*
ICChiseqgaiiFebDRAFT_1329829723300000363SoilMRFELTDEQHLMLELIADRPLPAIPEIARYTSVLAAARLIELTEEKRWKVTRLGKAMLV
ICChiseqgaiiFebDRAFT_1392145723300000363SoilMRVTLTDEQHLMLELIADKPLPAIPEIARYTNVLAAARLIELTLESRWTVTRRGEAMLEPRGYLVH*
F14TB_10217739923300001431SoilMRVTLTDEQHLMLELIADKPLPAIPELARYTSVLAAARLIELTVESRWTLTRRGEAMLEPRGYLVH*
F14TB_10430090933300001431SoilVTLTDEQHLMLEIIADTPLAAIPEIARYTNVLAAARLIELTPKAQWRITRLGQTMLAPRGYWVH*
Ga0062589_10165693933300004156SoilSLASSAQDRCVAKTGRLKMRITLTDEQHLMLELIADKPLLAIPENARYTSVLAAARLIELTAERRWTLTHRGKAILEPRGYWMH*
Ga0062590_10022260513300004157SoilMRVTLTDEQQLMLELISEHPLPAIPEIARYTSALAAARLIELTADKRWKVTRRGKAMLVPIDPHGCWVH*
Ga0063356_10189761713300004463Arabidopsis Thaliana RhizosphereEQQLMLELISEHPLPAIPEIARYTSALAAARLIELTADKRWKVTRRGKAMLVPIEPHGCWVH*
Ga0062595_10007719433300004479SoilMRVTLTDDQHLMLELIADKPVPATPEIDRYTNVLAAARLIELTLEKKWQVTRLGKAMMEPRGYWMH*
Ga0062595_10031241513300004479SoilKPMAALPEIARYTNPLAAARLIELTADAKWQLTQLGKAMMEPRTSYWVVPLGVV*
Ga0062595_10146081613300004479SoilMRVTLTDDQHLMLELIADKPIPAIPELARYTTILAAARLIELTAEAHWRVTRLGEAMLEPRGYWVH*
Ga0062592_10236711513300004480SoilDEQHLMLELIADKPLPAIPELARYTSVLAAARLIELTAESRWTLTRRGEAMLEPRGYWVH
Ga0062591_10263527523300004643SoilMRITLTDEQHLMLELIADKPLLAIPENARYTSVLAAARLIELTAERRWTLTHRGKAILEPRGYWMH*
Ga0062594_10187285013300005093SoilMRVTLTNEHHLMLELIADKPLPAIPEIARYTSVLAAARLIELTAESRWILTHRGKAMLEPRGYWVH*
Ga0062594_10314243723300005093SoilMRVTLTDELHLMLELIADKPLPAIPEIARYTSILAAAHLIQLTAESRWTLTHRGKAMLEPRGYWVH*
Ga0066388_10118580623300005332Tropical Forest SoilMRVTLTDEQHLMLELIADKPLPAIPEIARFTSVLAAARLIELTAANQWTLTRRGEAMLEPRGYWVH*
Ga0066388_10139038923300005332Tropical Forest SoilRRHSLASPAQDQCIAMMARFTMRVTLTDEQHLMLELIGDKPLPAIPEIARYTSVLAAARLIELTAANRWTLTRRGEAMLEPRGYWVH*
Ga0066388_10196787823300005332Tropical Forest SoilMRVTLTDEQHLMLELIADKPLPAIPEIARYTSVLAAARLIELTAVNQWTLTRRGEAMLEPRGYWVH*
Ga0066388_10441803713300005332Tropical Forest SoilMGRFTMRVTLTDEQHLMLELIADKPLPAMPEIARYTSVLAAARLIELTAANRWTLTRRGEAMLEPRGYWVH*
Ga0070691_1069922223300005341Corn, Switchgrass And Miscanthus RhizosphereMRITLTDEQHLMLELIADKPLLAIPEIARYTSVLAAARLIELTAERRWTLTHRGKAILEPRGYWMH*
Ga0070692_1141671623300005345Corn, Switchgrass And Miscanthus RhizosphereMRVTLTDEQQLMLELISEHPLPAIPEIARYTSALAAARLIELTADKRWKVTRRGKAMLVPIEPHGCWVH*
Ga0070668_10123534923300005347Switchgrass RhizosphereMRVTLTDEQHLILELIADKPLPAIPEIARYTSVLAAANLIELTGERRWTLTRRGQAMLEPRGYWMH*
Ga0070673_10024440713300005364Switchgrass RhizosphereMRATLSDDQFLMLELIADKPMAALPEIARYTNPLAAARLIELTADAKWQLTQLGKAMMEPRTSYWVVPLGVV*
Ga0070667_10213111913300005367Switchgrass RhizosphereMLCYTGRFKMRVTLTNEHHLMLELIADKPLPAIPEIARYTSVLAAARLIELTAESRWILTHRGKAMLEPRGYWVH*
Ga0070700_10055016723300005441Corn, Switchgrass And Miscanthus RhizosphereMRIALTDEQHLMLELIADKPIDAIPEVARYTNVLAAARLIELTVEKKWQVTRIGKAMMETRGYWVH*
Ga0070700_10176513013300005441Corn, Switchgrass And Miscanthus RhizosphereMRVTLTDEQHLMLELIADKPLPAIPELARYTSVLAAARLIELTAESRWTLTRRGEAMLEPRGYWVH
Ga0070662_10046113733300005457Corn RhizosphereEQQLMLELISEHPLPAIPEIARYTSALAAARLIELTADKRWKVTRRGKAMLVPIDPHGCWVH*
Ga0068867_10188825113300005459Miscanthus RhizosphereMRIALTDEQHLMLELIADKPLAAIPEIARYTGVLAAARLIELTPERQWTLTYRGKAILEPRGYWAH*
Ga0070704_10024300533300005549Corn, Switchgrass And Miscanthus RhizosphereMLELIADKPVPATPEIDRYTNVLAAARLIELTLEKKWQVTRLGKAMMEPRGYWMH*
Ga0068857_10188723923300005577Corn RhizosphereMQKMGRFEMRVTLTDEQHLMLELIADKPLPAIPEPARYTSVLAAARLIELTAESRWTLTRRGEAMLEPRGYWVH*
Ga0068857_10231728913300005577Corn RhizosphereMRVTLTNEHHLMLELIADKPLPAIPEIARYTSVLAAAHLIQLTAESRWTLTHRGKTMLEPRGYWMH*
Ga0070702_10119581723300005615Corn, Switchgrass And Miscanthus RhizosphereMRVMLTDDQHLMLELIADKPVPATPEIDRYTNVLAAARLIELTLEKKWQVTRLGKAMMEPRGYWMH*
Ga0070702_10142385623300005615Corn, Switchgrass And Miscanthus RhizosphereMRITLTDEQHLMLELIADKPLPAIPEIARYTGVLVAARLIELTAESQWTLTSRGKAMLEPRGCWMN*
Ga0068866_1116991113300005718Miscanthus RhizosphereMRVTLTDDQHLMLELIADKPVAAIPEIDRYTSVLAAARLIELTLDKKWQLTRLGEAMLAPRGYWLH*
Ga0066903_10646666313300005764Tropical Forest SoilMQITLTDEQHLMLELIADHPLPAIPEIVRYTSVLAAARLIQLTFDKRWKVTRDGEAMLSSMAVQGYWVH*
Ga0068863_10028515113300005841Switchgrass RhizosphereTYPMRATLSDDQFLMLELIADKPMAALPEIARYTNPLAAARLIELTADAKWQLTQLGKAMMEPRTSYWVVPLGVV*
Ga0068863_10073147813300005841Switchgrass RhizosphereTDDQHLMLELIADKPVPATPEIDRYTNVLAAARLIELTLEKKWQVTRLGKAMMEPRGYWMH*
Ga0068863_10090312323300005841Switchgrass RhizosphereMRVTLTDDQHLMLELIADKPIPAMPEIARYTNVLASARLIELTLEKKWQVTRLGKAMMEPRGYWVH*
Ga0068858_10103686513300005842Switchgrass RhizosphereMRIALTDEQHLMLELIADKPIDAIPEVARYTNVLAAARLIELTVEKKWQVTRIGKAMMEPRGYWVH*
Ga0068860_10028431643300005843Switchgrass RhizosphereDEQHLMLELIADKPLPAIPEIARYTGVLVAARLIELTAESQWTLTSRGKAMLEPRGYWMN
Ga0068862_10061952713300005844Switchgrass RhizosphereNMRVTLTDEQQLMLELISERSLPAIPEIARYTSALSAARLIELTADKRWKVTRRGKAMLVPIEPHGCWVH*
Ga0066651_1054852833300006031SoilTLTDDQHLMLELIADKPVPATPEIDRYTNVLAAARLIELTLEKKWQVTRLGKAMMEPRGYWMH*
Ga0075026_10070055723300006057WatershedsMRVTLIDDQHLMLELIADKPVPATLEIDRYTSVLAAARLIELTLEKKWQVTRLGKAMMEPRGYWVH*
Ga0075428_10001191923300006844Populus RhizosphereMRVTLTDEQHLMLELIADKPLPAIPEIARYTNVLAAARLIELTSESRWTVTRRGEAMLEPRGYLVH*
Ga0075428_10009330423300006844Populus RhizosphereMRFELTDEQHLMLELIADRPLPAIPEIARYTSVLAAARLIELTEEKRWKVTRLGKAMLVPMEAHVCWVH*
Ga0075428_10018766843300006844Populus RhizosphereMRVTLTDEQQLMLELISEHPLPAIPGIARYTSALAAARLIELTADKRWKVTRRGKAMLVPIEPHGCWVH*
Ga0075428_10044561133300006844Populus RhizosphereMRIALTDEQHLMLELIADKPLPATPEIARYTSALSAAQLIELTADKRWKVTGRGEAMLSPLEGIGCWVH*
Ga0075428_10186713313300006844Populus RhizosphereMRVTLTDEQHLMLELIADKPLPAIPELARYTSVLAAARLIELTAESRWTLTRRGEAMLEPRGYWVH*
Ga0075428_10219354523300006844Populus RhizosphereMRIALTDEQHLMLELIADKPQPAIPEIARYTGVLAAARLIELTAEKRWKVTRNGEAMLAPRGYWAH*
Ga0075421_10020959033300006845Populus RhizosphereMEKVGLAMRFELTDEQHLMLELIADRPLPAIPEIARYTSVLAAARLIELTEEKRWKVTRLGKAMLVPMEAHVCWVH*
Ga0075431_10162582413300006847Populus RhizosphereMEKVGLAMRFELTDEQHLMLELIADRPLPAIPEIARYTSVLAAARLIELTEEKRWKVTRLGKAMLVPMEAHV
Ga0075425_10258156413300006854Populus RhizosphereHLMLELIADKPIPAIPEIARYTNVLASARLIELTLEKKWQVTRLGKAMMEPRGYWMH*
Ga0075434_10062030333300006871Populus RhizosphereMRVTLTDDQHLMLELIADKPVPATPEIDRYTNVLAAARLIELTLEKKWQVTRLGKAMMEPRGYWVH*
Ga0075429_10021319053300006880Populus RhizosphereDGEENMRIALTDEQHLMLELIADKPLPATPEIARYTSALSAAQLIELTADKRWKVTGRGEAMLSP*
Ga0075419_1036280133300006969Populus RhizosphereMRVTLTDEQQLMLELISERSLSAIPEIARYTSALSAARLIELTADKRWKVTRRGKAMLVPIEPHGCWVH*
Ga0075435_10057798123300007076Populus RhizosphereMRVTLTDDQHLMLELIADKPVPATPEIDRYTSVLAAARLIELTLEKKWQVTRLGKAMMEPRGYWVH*
Ga0105251_1024859623300009011Switchgrass RhizosphereMLELIADKPLLAIPENARYTSVLAAARLIELTAERRWTLTHRGKAILEPRGYWM
Ga0066710_10139609023300009012Grasslands SoilMRVTLTDDQHLMLELIADKPIPAIPEIARYTNILAAARLIALTLEKKWQVTPLGKAMMEPRGYWVH
Ga0111539_1053045313300009094Populus RhizosphereMLELIADKPLPAIPEIARYTNVLAAARLIELSESRWTVTRRGEAMLEPRGYLVH*
Ga0111539_1286606213300009094Populus RhizosphereRCHILASQTHDRCNAKMGRFEMRVTLTDEQHLMLELIADKPLPAIPELARYTSALAAARLIELTAESRWILTRRGEAMLEPRGYWVH*
Ga0111539_1323993713300009094Populus RhizosphereTDEQHLMLELIAEKPLPAIPEIARYTGVLAAARLIELTDEKRWKVTRNGAAMLEPRDYWAH*
Ga0111539_1335615513300009094Populus RhizosphereMRVTLTDDQQLMLELIADKPIPATPKLARYTTVLAAARLIELTAEAHWRVTRLGEVVLLEPHTHWLH*
Ga0105245_1024632513300009098Miscanthus RhizosphereMRVTLTDDQHLMLELIADKPVPATPEIDRYTNVLAAARLIELTLEKKWRVTRLGKAMMEPRGYWMH*
Ga0075418_1087481023300009100Populus RhizosphereMQKMGRFEMRVTLTDEQHLMLELIADKPLPAIPELARYTSVLAAARLIELTAESRWTLTRRGEAMLEPRGYWVH*
Ga0066709_10057318723300009137Grasslands SoilMHCQDGEVEMRVTLTDEQHLILELIADKPLLAIPEIARYTSVLAAARLIELTAESRWTLTRRGEAMLEPRGYWVH*
Ga0066709_10152176413300009137Grasslands SoilMRVSLTDDQHLMLELIADKPIPAIPELARYTTVLAAARLIELTAEAHWRVTRLGEAMLEPRGYWVH*
Ga0099792_1102209223300009143Vadose Zone SoilTSGVPMRVTLTDEQHLMLELIADKPVAAIPEIARYTNVLAAARLIELTLEKKWQVTRLGKTMMEPRGYWVH*
Ga0111538_1165894423300009156Populus RhizosphereMRVTLTDEQQLMLELISERSLSAIPEIARYTSALSAARLIELTADRRWKLTQRGEAMVAPMGAHGYWVH*
Ga0111538_1228632613300009156Populus RhizosphereMRVALTDEQHLMLELIADKPLPAIPELARYTSVLAAARLIELTAESRWTLTRRGEAMLEPRGYWVH*
Ga0111538_1304059323300009156Populus RhizosphereMRIALTDEQHLMLEMISEKPLPAIPEIARYTGALAAARLIELTADKRWKLTQRGEIMLEPMGVRGY
Ga0105241_1260358313300009174Corn RhizosphereMRVTLTDEQQLMLELISEHPLPAIPEIARYTSALAAARLIELTADKRWKVTRRGKAMLVPIEPHG
Ga0105237_1251912413300009545Corn RhizospherePAPSLTRAPQRYGGGSKMRVTLTDEQQLMLELISEHPLPAIPEIARYTSALAAARLIELTADKRWKVTRRGKAMLVPIEPHGCWVH*
Ga0105249_1093625813300009553Switchgrass RhizosphereMRVTLTDEQHLMLELIADKPLPAIPELARYTSALAAARLIELTAESRWTLTRRGEAMLEPRGYWVH*
Ga0126370_1033885433300010358Tropical Forest SoilMRVTLTDEQHLMLELIADKPLPAIPEIARYTSVLAAARLIELTAVNQWTLTRRGEALLEPRGYWAH*
Ga0126376_1051806723300010359Tropical Forest SoilMRVTRTDEQHLMLELIADKPLPAIPEIARYTSVLAAARLIELTAANQWTLTRRGEAMLEPRGYWVH*
Ga0126372_1145519713300010360Tropical Forest SoilMRVTLTDEQHLMLELIGDKPLPAIPEIARYTSVLAAARLIELTAVNQWTLTRRGEALLEPRGYW
Ga0134124_1084222713300010397Terrestrial SoilQDRCVAKTGRFKMRITLTDEQHLMLELIADKPLLAIPENARYTSVLAAARLIELTAERRWTLTHRGKAILEPRGYWMH*
Ga0126383_1067681723300010398Tropical Forest SoilMRVTLTDEQHLMLELIADKPLPAIPEIARYTNVLAAACLIELTAVNQWTLTRRGEAMLEPRGYWVH*
Ga0134122_1037802613300010400Terrestrial SoilMRITLTDEQHLMLELIADKPLPAIPEIARYTGVLVAARLIELTAESQWTLTSRGKAMLEPRGYWMN*
Ga0134121_1032631013300010401Terrestrial SoilMFDAARILSLIRFPMRVTLTDDQHLMLELIADKPVAAIPEIDRYTSVLAAARLIELTLDKKWQLTRLGEAMLAPRGYWLH*
Ga0134123_1295084713300010403Terrestrial SoilTDEQHLMLELIADKPFPAIPEIARYTGVLVAARLIELTAESQWTLTSRGKAMLEPRGYWMN*
Ga0134123_1315799113300010403Terrestrial SoilMQKMGRFEMRVTLTDEQHLMLELIADKPLPAIPELARYTSALAAARLIELTAESRWTLTRRGEAMLEPRGYWVH*
Ga0105246_1050964023300011119Miscanthus RhizosphereMRVTLTDELHLMLELIADKPLPAIPEIARYTGVLVAARLIELTAESQWTLTSRGKAMLEPRGYWMN*
Ga0105246_1083253533300011119Miscanthus RhizosphereLTDEQHLMLELIADKPIDAIPEVARYTNVLAAARLIELTVEKKWQVTRIGKAMMEPRGYWVH*
Ga0150984_11141450923300012469Avena Fatua RhizosphereMLWSQGRLDAAYPQTVRFPMRVELSDEQHLMLELIADGPVAAIPEIARYTAALASARLIELTADAKWQVTQLGKTLMEPTRGYWVH*
Ga0150984_12339518913300012469Avena Fatua RhizosphereMRVILSDDHYLMLELIADKPIAALPEIAHYTNVLASARLIELTPDAKWQLTRLGEAMMEPRTYWMH*
Ga0164300_1031058423300012951SoilMHGSMGRFKMRVTITDEMHLIFELIADKPLPAIPEIARYTSILAAAHLIQLTAESRWTLTHRGKAMLEPRGYWVH*
Ga0164298_1048882513300012955SoilMHGSMGRFKMRVTITDEMHLMLELIADKPLPAIPEIARYTSVLAAARLIELTAESRWILTHRGMAVLEPRGYWVH*
Ga0164298_1052762313300012955SoilMLELIADKPIPAMPEIARYTNVLASARLIELTLEKKWQVTRLGKAMMEPRGYWVH*
Ga0126369_1159937813300012971Tropical Forest SoilMRVTLTDEQHLMLELIADKPLPAIPEIARYTSVLAAERLIEFTAANRWILTRRGEAMLEPRGHWVH*
Ga0164309_1060861623300012984SoilMLELIADKPVPATPEIDRYTSVLAAARLIELTLEKKWQVTRLGKAMMEPRGYWVH*
Ga0164304_1113986423300012986SoilELIADKPIPAMPEIARYTNVLASARLIELTPDAKWQVTRLGKVMMGPRGYWVH*
Ga0157378_1027995513300013297Miscanthus RhizosphereMRIALTDEQHLMLELIADKPIDAIPEVARYTNVLAAARLIELTVEKKWQVTRIGKAMMEP
Ga0157378_1153744613300013297Miscanthus RhizosphereEQHLMLELIADKPLAAIPEISRYTGVLAAARLIELTPERQWTLTYRGKAILEPRGYWAH*
Ga0157380_1102344513300014326Switchgrass RhizosphereMRLELTDKQHLMLELTADRPPPAIPEIARYTSVLAAARLIELTEEKRWKVTRLGNAMLVPMEAHVCWVH*
Ga0157380_1182806813300014326Switchgrass RhizosphereMRVTLTDEQQLMLELISERSLPAIPEIARYTSALSAARLIELTADKRWKLTHRGEAMLEPMGAHGYWV
Ga0132258_1118865523300015371Arabidopsis RhizosphereDDQFLMLELIADKPMAALPEIARYTNPLAAARLIELTADAKWQLTQLGKAMMEPRTSYWVVPLGVV*
Ga0132258_1284135213300015371Arabidopsis RhizosphereMLELIADKPVPATPEIDRYTSVLAAARLIELTLEKKWQVTRLGKAMMEPR
Ga0184635_1019118523300018072Groundwater SedimentMRVTLTDEQHLMLELIADEPLPAIPEIARYTNVLAAARLIELTSESRWTVTRRGEAMLEPRGYLVH
Ga0066667_1166622613300018433Grasslands SoilMRVTRTDDQHLMLELIADKPIPAIPEIARYTNILAAARLIALTLEKKWQVTPLGKAMMEPRGYWVH
Ga0190270_1038765323300018469SoilMRVTLTDEQHLMLELIADKPLPAIPEIARYTSVLAAARLIELTAESRWTLTRRGEAMLEPRGYWVH
Ga0190274_1106611313300018476SoilYPQTVRFPMRVELSDEQHLMLELIADGPVAAIPEIARYTAALASARLIELTADAKWQVTQLGKTLMEPTRGYWVH
Ga0190274_1118631013300018476SoilMGRFERRVTLTDEQHLMFELIADKPLPAIPEIARYTSALAAANLIELTGERRWTLTRRGEEMFVPRGDWVH
Ga0066669_1171988323300018482Grasslands SoilMHCQDGEVEMRVTLTDEQHLILELIADKPLLAIPEIARYTSVLAAARLIELTAESRWTLTRRGEAMLEPRGYWVH
Ga0207710_1060524513300025900Switchgrass RhizosphereMLELIADKPLLAIPENARYTSVLAAARLIELTAERRWTLTHRGKAILEPRGYWMH
Ga0207687_1116460313300025927Miscanthus RhizosphereMRVTLTDDQHLMLELIADKPVPATPEIDRYTNVLAAARLIELTLEKKWRVTRLGKAMMEPRGYWMH
Ga0207679_1117985713300025945Corn RhizosphereMRITLTDEQHLMLELIADKPLAAIPEIARYTGVLAAARLIELTPEHQWTLTYRGKALLEPRGYWAH
Ga0207651_1106162213300025960Switchgrass RhizosphereMRITLTDEQHLMLELIADKPLLAIPENARYTSVLAAARLIELTAERRWTLTHRGKAILEPRGYWMH
Ga0207678_1088864313300026067Corn RhizosphereMRVTLTDDQHLMLELIADKPVAAIPEIDRYTSVLAAARLIELTLDKKWQLTRLGEAMLAPRGYWLH
Ga0207708_1065778223300026075Corn, Switchgrass And Miscanthus RhizosphereMRIALTDEQHLMLELIADKPIDAIPEVARYTNVLAAARLIELTVEKKWQVTRIGKAMMETRGYWVH
Ga0207708_1099422813300026075Corn, Switchgrass And Miscanthus RhizosphereMRVTLTDEQHLMLELIADKPLPAIPELARYTSALAAARLIELTAESRWTLTRRGEAMLEPRGYWVH
Ga0209488_1029169333300027903Vadose Zone SoilLTDDQHLLLELIADKPIPAMPEIARSTSILAAARLIELTLEKKWQVTRLGKTMMEPRGYWVH
Ga0207428_1018320933300027907Populus RhizosphereMRVTLTDEQQLMLELISEHPLPAIPEIARYTSALAAARLIELTADKRWKVTRRGKAMLVPIEPHGCWVH
Ga0207428_1036161923300027907Populus RhizosphereMRFELTDEQHLMLELIADRPLPAIPEIARYTSVLAAARLIELTEEKRWKVTRLGKAMLVPMEAHVCWVH
Ga0209382_1001364613300027909Populus RhizosphereMRVTLTDEQHLMLELIADKPLPAIPEIARYTNVLAAARLIELTSESRWTVTRRGEAMLEPRGYLVH
Ga0209382_1023718733300027909Populus RhizosphereMRIALTDEQHLMLELIADKPQPAIPEIARYTGVLAAARLIELTAEKRWKVTRNGEAMLAPRGYWAH
Ga0209382_1048024123300027909Populus RhizosphereMRIALTDEQHLMLELIADKPLPATPEIARYTSALSAAQLIELTADKRWKVTGRGEAMLSPLEGIGCWVH
Ga0209382_1124693713300027909Populus RhizosphereTLTDEQQLMLELISEHPLPAIPEIARYTSALAAARLIELTADKRWKVTRRGKAMLVPIEPHGCWVH
Ga0247818_1094912113300028589SoilMRVTLTDEQHLMLELIADKPLPAIPEIARHTSVLAAALLIELTAESRWTLTRRGEA
Ga0247822_1092634423300028592SoilAPGRGRLARSSLMEKVGLAMRFELTDEQHLMLELIADRPLPAIPEIARYTSVLAAARLIELTEEKRWKVTRLGKAMLVPMEAHVCWVH
Ga0247822_1115515613300028592SoilMRIALTDEQHLMLELIADKPLPATPEIARYTSALSAAQLIELTADKRWKVTGRGEAMLSP
Ga0247824_1013485213300028809SoilMRVTLTDEQHLMLELIADKPLPAIPEIARYTSVLAAARLIELTAESRRTLTRRGEAMLEPRGYWVH
Ga0247824_1060393923300028809SoilMRVTLTDEQQLMLELISEHPLPAIPEIARYTSALAAARLIELTADKRWKVTRRGKAMLVP
Ga0247827_1058149423300028889SoilMRVTLTDEQHLMLELIADKPLPAIPEIARHTSVLAAAHLIELTAESRWTLTRRGEAMLEPRGYWVH
Ga0307468_10229019423300031740Hardwood Forest SoilMRVTLTDDQHLMLELIADKPVPATPEIDRYTNVLAAARLIELTLEKKWQVTRLGKAMM
Ga0310904_1036516813300031854SoilMRVTLTDEQQLMLELISERSLPAIPEIARYTSALSAARLIELTADKRWKLTHRGEAMLEPMGAHGYWVH
Ga0310901_1009752813300031940SoilEQQLMLELISERSLPAIPEIARYTSALSAARLIELTADKRWKVTRRGKAMLVPIDPHGCWVH
Ga0310885_1015549133300031943SoilLTDEQQLMLELISEHPLPAIPEIARYTSALAAARLIELTADKRWKVTRRGKAMLVPIDPHGCWVH
Ga0310906_1010228013300032013SoilPSLTRAPQRYGGGSKMRVTLTDEQQLMLELISEHPLPAIPEIARYTSALAAARLIELTADKRWKVTRRGKAMLVPIEPHGCWVH
Ga0307471_10228897313300032180Hardwood Forest SoilMRVTLTDEQHLMLELIADKPIPAIPEIARYTNVLAAARLIELTSESRWAVTRRGEAMLEPRGYLVH
Ga0247830_1089701423300033551SoilMGRFEMRVTLTDEQHLMLELIADKPLPAIPEIARYTSVLAAARLIELTAESRWTLTRRGEAMLEPRGYWVH

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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