Metagenome Family F061235

Basic Information
Family ID	F061235
Family Type	Metagenome
Number of Sequences	132
Average Sequence Length	91 residues
Representative Sequence	DEKKILMILCTRVKQEAETAIGESNLPGIDRPYKQALAEIDRGRGVEAVRDLIRQTEKAISSIRGPAIMKAFQEKMSLVMQPKV
Number of Associated Samples	107
Number of Associated Scaffolds	132

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	3.08 %
% of genes near scaffold ends (potentially truncated)	90.91 %
% of genes from short scaffolds (< 2000 bps)	90.15 %
Associated GOLD sequencing projects	97
AlphaFold2 3D model prediction	No

Most Common Taxonomy
Group	Unclassified (52.273 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil (8.333 % of family members)
Environment Ontology (ENVO)	Unclassified (35.606 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (46.212 % of family members)

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 77.38% β-sheet: 0.00% Coil/Unstructured: 22.62%
Feature Viewer

Powered by Feature Viewer

Pfam ID	Name	% Frequency in 132 Family Scaffolds
PF00691	OmpA	6.06
PF01594	AI-2E_transport	2.27
PF14332	DUF4388	0.76
PF02706	Wzz	0.76
PF03129	HGTP_anticodon	0.76

COG ID	Name	Functional Category	% Frequency in 132 Family Scaffolds
COG0628	Predicted PurR-regulated permease PerM	General function prediction only [R]	2.27
COG0124	Histidyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.76
COG0423	Glycyl-tRNA synthetase, class II	Translation, ribosomal structure and biogenesis [J]	0.76
COG0441	Threonyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.76
COG0442	Prolyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.76
COG3206	Exopolysaccharide export protein/domain GumC/Wzc1	Cell wall/membrane/envelope biogenesis [M]	0.76
COG3524	Capsule polysaccharide export protein KpsE/RkpR	Cell wall/membrane/envelope biogenesis [M]	0.76
COG3765	LPS O-antigen chain length determinant protein, WzzB/FepE family	Cell wall/membrane/envelope biogenesis [M]	0.76
COG3944	Capsular polysaccharide biosynthesis protein YveK	Cell wall/membrane/envelope biogenesis [M]	0.76

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.27 %
All Organisms	root	All Organisms	47.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.27 %
cellular organisms	root	All Organisms → cellular organisms	47.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.27 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	47.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.27 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	42.42 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.03 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.27 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	41.67 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.03 %
Thermoanaerobaculia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Thermoanaerobaculia	0.76 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.27 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	41.67 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.03 %
Thermoanaerobaculales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Thermoanaerobaculia → Thermoanaerobaculales	0.76 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.27 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	41.67 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.03 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	0.76 %
Thermoanaerobaculaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Thermoanaerobaculia → Thermoanaerobaculales → Thermoanaerobaculaceae	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.27 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	41.67 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.03 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.76 %
Thermoanaerobaculum	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Thermoanaerobaculia → Thermoanaerobaculales → Thermoanaerobaculaceae → Thermoanaerobaculum	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.27 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	41.67 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.03 %
Thermoanaerobaculum aquaticum	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Thermoanaerobaculia → Thermoanaerobaculales → Thermoanaerobaculaceae → Thermoanaerobaculum → Thermoanaerobaculum aquaticum	0.76 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.76 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_105316959	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	820	Open in IMG/M
3300000559\|F14TC_102954381	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	700	Open in IMG/M
3300000651\|AP72_2010_repI_A10DRAFT_1034424	Not Available	654	Open in IMG/M
3300004019\|Ga0055439_10101476	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	853	Open in IMG/M
3300004643\|Ga0062591_101150215	Not Available	752	Open in IMG/M
3300005093\|Ga0062594_102165707	Not Available	600	Open in IMG/M
3300005332\|Ga0066388_108368744	Not Available	516	Open in IMG/M
3300005334\|Ga0068869_100061052	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2764	Open in IMG/M
3300005343\|Ga0070687_100815249	Not Available	662	Open in IMG/M
3300005347\|Ga0070668_101523484	Not Available	611	Open in IMG/M
3300005356\|Ga0070674_101002438	Not Available	733	Open in IMG/M
3300005356\|Ga0070674_102219383	Not Available	501	Open in IMG/M
3300005367\|Ga0070667_100893020	Not Available	827	Open in IMG/M
3300005439\|Ga0070711_100737357	Not Available	832	Open in IMG/M
3300005468\|Ga0070707_101034506	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	787	Open in IMG/M
3300005518\|Ga0070699_100997123	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	768	Open in IMG/M
3300005518\|Ga0070699_101629427	Not Available	591	Open in IMG/M
3300005536\|Ga0070697_102106497	All Organisms → cellular organisms → Bacteria → Acidobacteria → Thermoanaerobaculia → Thermoanaerobaculales → Thermoanaerobaculaceae → Thermoanaerobaculum → Thermoanaerobaculum aquaticum	505	Open in IMG/M
3300005548\|Ga0070665_100010071	All Organisms → cellular organisms → Bacteria	9568	Open in IMG/M
3300005548\|Ga0070665_100394625	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1391	Open in IMG/M
3300005548\|Ga0070665_102493080	Not Available	519	Open in IMG/M
3300005618\|Ga0068864_100581750	Not Available	1085	Open in IMG/M
3300005764\|Ga0066903_103232321	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	881	Open in IMG/M
3300005764\|Ga0066903_103495515	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	847	Open in IMG/M
3300005764\|Ga0066903_107765171	Not Available	552	Open in IMG/M
3300005836\|Ga0074470_10246504	Not Available	573	Open in IMG/M
3300005841\|Ga0068863_102341617	Not Available	544	Open in IMG/M
3300006172\|Ga0075018_10338446	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	751	Open in IMG/M
3300006237\|Ga0097621_100464727	Not Available	1142	Open in IMG/M
3300006358\|Ga0068871_101853182	Not Available	573	Open in IMG/M
3300006854\|Ga0075425_101431873	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	781	Open in IMG/M
3300006954\|Ga0079219_11447110	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	618	Open in IMG/M
3300009011\|Ga0105251_10088671	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1423	Open in IMG/M
3300009053\|Ga0105095_10829196	Not Available	518	Open in IMG/M
3300009101\|Ga0105247_11129667	Not Available	620	Open in IMG/M
3300009176\|Ga0105242_13115121	Not Available	514	Open in IMG/M
3300009177\|Ga0105248_11579224	Not Available	743	Open in IMG/M
3300009792\|Ga0126374_11218257	Not Available	604	Open in IMG/M
3300010048\|Ga0126373_11827112	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	671	Open in IMG/M
3300010048\|Ga0126373_13321727	Not Available	500	Open in IMG/M
3300010360\|Ga0126372_11302623	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	755	Open in IMG/M
3300010360\|Ga0126372_12049236	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	619	Open in IMG/M
3300010366\|Ga0126379_10443770	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1357	Open in IMG/M
3300010366\|Ga0126379_10553479	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1230	Open in IMG/M
3300010366\|Ga0126379_12174811	Not Available	656	Open in IMG/M
3300010398\|Ga0126383_12940670	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	556	Open in IMG/M
3300011269\|Ga0137392_11537541	Not Available	524	Open in IMG/M
3300012201\|Ga0137365_10574968	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	826	Open in IMG/M
3300012491\|Ga0157329_1044720	Not Available	508	Open in IMG/M
3300012530\|Ga0136635_10211045	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	665	Open in IMG/M
3300012532\|Ga0137373_10127532	All Organisms → cellular organisms → Bacteria → Proteobacteria	2179	Open in IMG/M
3300012916\|Ga0157310_10438536	Not Available	553	Open in IMG/M
3300012948\|Ga0126375_10364417	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1031	Open in IMG/M
3300012948\|Ga0126375_11317821	Not Available	608	Open in IMG/M
3300012989\|Ga0164305_10953798	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	725	Open in IMG/M
3300013296\|Ga0157374_12602939	Not Available	534	Open in IMG/M
3300013306\|Ga0163162_11864996	Not Available	688	Open in IMG/M
3300013306\|Ga0163162_12419060	Not Available	604	Open in IMG/M
3300013308\|Ga0157375_10471398	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1421	Open in IMG/M
3300013503\|Ga0120127_10031234	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	996	Open in IMG/M
3300013503\|Ga0120127_10037905	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	926	Open in IMG/M
3300014320\|Ga0075342_1147622	Not Available	640	Open in IMG/M
3300014325\|Ga0163163_10724918	Not Available	1058	Open in IMG/M
3300014325\|Ga0163163_11106957	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	855	Open in IMG/M
3300014326\|Ga0157380_10130034	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2146	Open in IMG/M
3300014326\|Ga0157380_10749306	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	988	Open in IMG/M
3300014829\|Ga0120104_1085685	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	622	Open in IMG/M
3300014969\|Ga0157376_10059000	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3217	Open in IMG/M
3300014969\|Ga0157376_11518008	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	703	Open in IMG/M
3300014969\|Ga0157376_12130299	Not Available	599	Open in IMG/M
3300015168\|Ga0167631_1034406	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	823	Open in IMG/M
3300015371\|Ga0132258_10190921	All Organisms → cellular organisms → Bacteria → Proteobacteria	4962	Open in IMG/M
3300015371\|Ga0132258_10601890	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2759	Open in IMG/M
3300015372\|Ga0132256_101011077	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	947	Open in IMG/M
3300015373\|Ga0132257_101247036	Not Available	942	Open in IMG/M
3300015373\|Ga0132257_102977180	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	617	Open in IMG/M
3300015374\|Ga0132255_103361530	Not Available	681	Open in IMG/M
3300015374\|Ga0132255_103469008	Not Available	671	Open in IMG/M
3300015374\|Ga0132255_105344644	Not Available	544	Open in IMG/M
3300016357\|Ga0182032_11141749	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	669	Open in IMG/M
3300017974\|Ga0187777_10336286	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1036	Open in IMG/M
3300017974\|Ga0187777_10788854	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	678	Open in IMG/M
3300017993\|Ga0187823_10101018	Not Available	863	Open in IMG/M
3300018029\|Ga0187787_10085956	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	989	Open in IMG/M
3300018078\|Ga0184612_10526419	Not Available	572	Open in IMG/M
3300021080\|Ga0210382_10298909	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	708	Open in IMG/M
3300021445\|Ga0182009_10010626	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3185	Open in IMG/M
3300021478\|Ga0210402_11871492	Not Available	526	Open in IMG/M
3300025321\|Ga0207656_10468929	Not Available	637	Open in IMG/M
3300025906\|Ga0207699_11354316	Not Available	527	Open in IMG/M
3300025916\|Ga0207663_10553266	Not Available	900	Open in IMG/M
3300025923\|Ga0207681_11372289	Not Available	593	Open in IMG/M
3300025932\|Ga0207690_11653416	Not Available	535	Open in IMG/M
3300025934\|Ga0207686_10457780	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	983	Open in IMG/M
3300025935\|Ga0207709_10069444	All Organisms → cellular organisms → Bacteria → Proteobacteria	2230	Open in IMG/M
3300025941\|Ga0207711_10060736	All Organisms → cellular organisms → Bacteria → Proteobacteria	3258	Open in IMG/M
3300025972\|Ga0207668_12081261	Not Available	511	Open in IMG/M
3300026034\|Ga0208773_1013266	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1081	Open in IMG/M
3300026095\|Ga0207676_10564119	Not Available	1089	Open in IMG/M
3300026121\|Ga0207683_10698014	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	941	Open in IMG/M
3300026273\|Ga0209881_1165430	Not Available	552	Open in IMG/M
3300027013\|Ga0209884_1041341	Not Available	501	Open in IMG/M
3300027874\|Ga0209465_10303288	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	800	Open in IMG/M
3300028379\|Ga0268266_10073238	All Organisms → cellular organisms → Bacteria	2972	Open in IMG/M
3300028379\|Ga0268266_10174975	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1950	Open in IMG/M
3300028589\|Ga0247818_11247061	Not Available	532	Open in IMG/M
3300030620\|Ga0302046_10525261	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	968	Open in IMG/M
3300031543\|Ga0318516_10868248	Not Available	508	Open in IMG/M
3300031544\|Ga0318534_10520414	Not Available	679	Open in IMG/M
3300031681\|Ga0318572_10629580	Not Available	639	Open in IMG/M
3300031720\|Ga0307469_10922999	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	810	Open in IMG/M
3300031720\|Ga0307469_11283763	Not Available	695	Open in IMG/M
3300031747\|Ga0318502_10142821	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1361	Open in IMG/M
3300031820\|Ga0307473_11473771	Not Available	515	Open in IMG/M
3300032008\|Ga0318562_10622990	Not Available	623	Open in IMG/M
3300032044\|Ga0318558_10553877	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	574	Open in IMG/M
3300032066\|Ga0318514_10487335	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	656	Open in IMG/M
3300032067\|Ga0318524_10713087	Not Available	529	Open in IMG/M
3300032076\|Ga0306924_11561692	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	697	Open in IMG/M
3300032174\|Ga0307470_11473876	Not Available	565	Open in IMG/M
3300032174\|Ga0307470_11515343	Not Available	558	Open in IMG/M
3300032205\|Ga0307472_100898946	Not Available	820	Open in IMG/M
3300032256\|Ga0315271_10920830	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	754	Open in IMG/M
3300032261\|Ga0306920_104290121	Not Available	513	Open in IMG/M
3300032275\|Ga0315270_10818844	Not Available	613	Open in IMG/M
3300032516\|Ga0315273_12051082	Not Available	677	Open in IMG/M
3300032782\|Ga0335082_10922986	Not Available	736	Open in IMG/M
3300033433\|Ga0326726_10990461	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	816	Open in IMG/M
3300033501\|Ga0326732_1038503	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	799	Open in IMG/M
3300033814\|Ga0364930_0341203	Not Available	502	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	62.88%
Host-Associated	Host-Associated	37.12%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	54.55%
Plants	Host-Associated → Plants	37.12%
Aquatic	Environmental → Aquatic	8.33%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	52.27%
Rhizosphere	Host-Associated → Plants → Rhizosphere	21.97%
Rhizoplane	Host-Associated → Plants → Rhizoplane	12.12%
Freshwater	Environmental → Aquatic → Freshwater	5.30%
Roots	Host-Associated → Plants → Roots	3.03%
Sediment	Environmental → Aquatic → Sediment	2.27%
Peat	Environmental → Terrestrial → Peat	1.52%
Marine	Environmental → Aquatic → Marine	0.76%
Floodplain	Environmental → Terrestrial → Floodplain	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	34.85%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	11.36%
Loam	Environmental → Terrestrial → Soil → Loam	10.61%
Soil	Host-Associated → Plants → Rhizosphere → Soil	10.61%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	6.06%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	6.06%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	5.30%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	3.03%
Lake	Environmental → Aquatic → Freshwater → Lake	2.27%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.27%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.52%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	1.52%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.76%
Ice	Environmental → Aquatic → Freshwater → Ice	0.76%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.76%
Sand	Environmental → Terrestrial → Soil → Sand	0.76%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.76%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	14.39%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	14.39%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	11.36%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	10.61%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.06%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	6.06%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	5.30%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	4.55%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.79%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	3.03%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	2.27%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.27%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.27%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	2.27%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.52%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.52%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	1.52%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.76%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	0.76%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.76%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.76%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.76%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.76%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.76%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.76%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.76%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	8.33%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	7.58%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	6.82%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.30%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	5.30%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.55%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.79%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	3.79%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	3.03%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	2.27%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.27%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.27%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	2.27%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.27%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	2.27%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.27%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.27%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.52%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	1.52%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	1.52%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.52%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	1.52%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	1.52%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.52%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.52%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	0.76%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.76%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.76%
Polar Desert Sand	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand	0.76%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.76%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	0.76%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.76%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.76%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.76%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.76%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.76%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.76%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.76%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	0.76%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.76%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.76%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	0.76%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.76%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.76%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.76%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.76%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.76%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.76%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.76%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.76%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300000651	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A10	Environmental	Open in IMG/M
3300004019	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleB_D2	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005836	Microbial communities from Youngs Bay mouth sediment, Columbia River estuary, Oregon - S.42_YBB	Environmental	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006864	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 3 DNA2013-193	Environmental	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009011	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG	Host-Associated	Open in IMG/M
3300009053	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012491	Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.8.old.040610	Host-Associated	Open in IMG/M
3300012530	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ85 (21.06)	Environmental	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012916	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S213-509R-2	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300013503	Permafrost microbial communities from Nunavut, Canada - A23_5cm_12M	Environmental	Open in IMG/M
3300014320	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqA_D1	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014829	Permafrost microbial communities from Nunavut, Canada - A10_35cm_6M	Environmental	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015168	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G4A, Ice margin, adjacent to proglacial lake)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300017993	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_3	Environmental	Open in IMG/M
3300018029	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_BV01_MP06_20_MG	Environmental	Open in IMG/M
3300018078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_coex	Environmental	Open in IMG/M
3300021080	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo	Environmental	Open in IMG/M
3300021445	Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaG	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300025321	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026034	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_5C_0N_302 (SPAdes)	Environmental	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026273	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 3 DNA2013-193 (SPAdes)	Environmental	Open in IMG/M
3300027013	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_30_40 (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028589	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day1	Environmental	Open in IMG/M
3300030620	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT147D111	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300032008	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032067	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032256	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_top	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032275	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C1_bottom	Environmental	Open in IMG/M
3300032516	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G02_0	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M
3300033501	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF12FN SIP fraction	Environmental	Open in IMG/M
3300033814	Sediment microbial communities from East River floodplain, Colorado, United States - 55_j17	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1053169592	3300000364	Soil	DEKKILMILCTRVKQEAETAIGESNLPGIDRPYKQALAEIDHGRGVEAVRDLIRHTEKAISSIRGPAIMKAFQEKMSLVMQPRV*
F14TC_1029543812	3300000559	Soil	CTRVKQEAEIAIGESNLPGIDRPYKQALAEIDRGRGVEAVRDLIRQTEKAIASIRGPAIMKAFQDKMSLVMQPKV*
AP72_2010_repI_A10DRAFT_10344241	3300000651	Forest Soil	TPQAPSTPPAAAAAAGGNAGSGVIGDEKKILMILCTRVKQEAEAALGEGNLPGIDRPYKQALAEIDKGRGVEAVRDLIRHTEKAIASIRGPAIMKTFQEKMSLVMQPRI*
Ga0055439_101014761	3300004019	Natural And Restored Wetlands	GGTDEKKILMILCTRVKQEAEAAIGEANLPGIDRPYKQALADIDRGRGVEAVRDLIRHTEKAISSIRGPAIMRAFQEKMSLVMQPKV*
Ga0062591_1011502151	3300004643	Soil	AGSASMLGDEKKILMILCTRVKQEAEAAVGEGNLPGIDRPYKQALAEIDKGRGVEAVRDLIRHTEKAIASIRGPAIMKTFQEKMSLVMQPRI*
Ga0062594_1021657071	3300005093	Soil	LGDEKKILMILCTRVKQEAETAIGESNLPGIDRPYKQALAEIDRGRGVEAVRDLIRQTEKAIASIRGPAIMKAFQEKMSLVMQPKV*
Ga0066388_1083687441	3300005332	Tropical Forest Soil	LGDEKKILMILCTRVKQEAETAIGESNLPGIDRPYKQALAEIDRGRGVEAVRDLIRSTEKAISSIRGPAIMKTFQEKMSLVMQPKV*
Ga0068869_1000610521	3300005334	Miscanthus Rhizosphere	STSVASVASVATAPAVLGDEKKILMILCTRVKQEAETAIGESNLPGIDRPYKQALAEIDRGRGVEAVRDLIRHTEKAISSIRGPAIMKAFQEKMSLVMQPKV*
Ga0070687_1008152491	3300005343	Switchgrass Rhizosphere	MPTPPIPPVLGDEKKILMILCTRVKQEAETAIGESNLPGIDRPYKQALAEIDRGRGVEAVRDLIRQTEKAIASIRGPAIMKAFQEKMSLVMQPKV*
Ga0070668_1015234841	3300005347	Switchgrass Rhizosphere	RVKQEAETAIGESNLPGIDRPYKQALAEIDRGRGVEAVRDLIRHTEKAISSIRGPAIMKAFQEKMSLVMQPKV*
Ga0070674_1010024381	3300005356	Miscanthus Rhizosphere	MILCTRVKQEAEAALGEGNLPGIDRPYKQALAEIDKGRGVEAVRDLIRHTEKAISSIRGPAIMRAFQEKMSLVMQPRI*
Ga0070674_1022193831	3300005356	Miscanthus Rhizosphere	EKKILMILCTRVKQEAETAIGESNLPGIDRPYKQALAEIDRGRGVEAVRDLIRHTEKAISSIRGPAIMKAFQEKMSLVMQPKV*
Ga0070667_1008930201	3300005367	Switchgrass Rhizosphere	DEKKILMILCTRVKQEAEAAMGEQNIPGIDRPYRQALAEIDRGRGIDSVRDFIRQTEQTISTLRGNGPMRAFQEKMSLVMQPKSQ*
Ga0070711_1007373572	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	PAALGDEKKILMILCTRVKQEAEATMGEQNLPGIDRPYRQALAEIDRGRGIESVREFIRQTEQTISALRGAAPMRAFQEKMSLVMQPKA*
Ga0070707_1010345061	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	DEKKILMILCTRVKQEAETAIGESNLPGIDRPYKQALAEIDRGRGVEAVRDLIRQTEKAISSIRGPAIMKAFQEKMSLVMQPKV*
Ga0070699_1009971232	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	AGLAEMRSKETARPTAAIPTPAVLGDEKKILMILCTRVKQEAETAMGESNLPTLERPYRQALAEIDQGRGVEAVRDLIRQTEKAISTLRGPARVKAFQDKMSLVMQPKA*
Ga0070699_1016294272	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	KQEAEATMGEQNLPGIDRPYRQALAEIDRGRGIESVRDFIRQTEQTISSLRGMAPMRAFQEKMSLVMQPKA*
Ga0070697_1021064971	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	APALGDEKKILMILCTRVKQEAEAAIGEANLPGIDRPYKLALAEIDRGRGVEAVRDLIRQTEKAISSIRGPALMKAFQEKMSLVMQPKV*
Ga0070665_1000100719	3300005548	Switchgrass Rhizosphere	RVKQEAETAIGESNLPGIDRPYKQALAEIDRGRGVEAVRDLIRQTEKAIASIRGPAIMKAFQEKMSLVMQPKV*
Ga0070665_1003946251	3300005548	Switchgrass Rhizosphere	AAMIGDEKKILMILCTRVKQEAEAALGEGNLPGIDRPYKQALAEIDKGRGVEAVRDLIRHTEKAISSIRGPAIMRAFQEKMSLVMQPRI*
Ga0070665_1024930801	3300005548	Switchgrass Rhizosphere	AAAAAMIGDEKKILMILCTRVKQEAEAALGEGNLPGIDRPYKQALAEIDKGRGVEAVRDLIRHTEKAISSIRGPAIMRAFQEKMSLVMQPRI*
Ga0068864_1005817501	3300005618	Switchgrass Rhizosphere	LMILCTRVKQEAEGAIGEANLPGIDRPYKQAIAEIDRGRGVEAVRDLIRATEKAISSIRGPAIMKAFQEKMSLVMQPKV*
Ga0066903_1032323212	3300005764	Tropical Forest Soil	LGDEKKILMILCTRVKQEAELALGEQNLPGIERPYKQALAEIDRGRGVEAVRDLIRATEKAISAIRGPARMKAFQDKMSLVMQPKA*
Ga0066903_1034955152	3300005764	Tropical Forest Soil	GGPRPTGPIPASVSGGSGPALLGDEKKILMILCTRVKQEAEIALGEQNLPGIERPYKQALAEIDRGRGVEAVRDLIRATEKAISAIRGPARMKAFQDKMSLVMQPKA*
Ga0066903_1077651711	3300005764	Tropical Forest Soil	EKKILMILCTRVKQEAEGAIGEANLPGIDRPYKQALAEIDRGRGVEAVRDLIRHTEKAIASIRGPAIMKAFQEKMSLVMQPKV*
Ga0074470_102465041	3300005836	Sediment (Intertidal)	QEAETAVGESNLPGLDRPYKQALAEIDRGRGVEAVRDLIRYTEKAISSIRGPAIMRTFQDKMSLVMQPKV*
Ga0068863_1023416171	3300005841	Switchgrass Rhizosphere	QASPAVLGDEKKILMILCTRVKQEAEAAMGEQSIPGIDRPYRQALAEIDRGRGIESVRDFIRQTEQTISALRGSGPMRAFQEKMALVMQPKS*
Ga0075018_103384462	3300006172	Watersheds	MILCTRVKQEAEIAIGESTLPGIERPYKQALAEIDRGRGVEAVRDLIRETEKTISSIKGPARMKAFQDKMSLVMQPKA*
Ga0097621_1004647272	3300006237	Miscanthus Rhizosphere	NSVLGDEKKILMILCTRVKQEAEGAIGEANLPGIDRPYKQAIAEIDRGRGVEAVRDLIRATEKAISSIRGPAIMRAFQEKMSLVMQPKV*
Ga0068871_1018531822	3300006358	Miscanthus Rhizosphere	MILCTRVKQEAEAAMGEQNLPGIDRPYRQALAEIDRGRGIDSVRDFIRQTEQTISSLRGEAPMRAFQEKMALVMQPKA*
Ga0075425_1014318731	3300006854	Populus Rhizosphere	VLGDEKKILMILCTRVKQEAEIALGEANLPGIERPYKQALAEIDRGRGVEAVRDLIRLTEKAIASIRGPARMKAFQDKMSLVMQPKA*
Ga0066797_11773301	3300006864	Soil	NRTSPFDVAKTLYGLVAADLVELRAKDSPRPAPAAPSPAPAALGDEKKILMILCTRVKQEAEATMGEQNLPGIDRPYRQALAEIDRGRGIEAVRDFIRQTEQTISALRGATPMRAFQEKMSLVMQPKS*
Ga0079219_114471102	3300006954	Agricultural Soil	LMILCTRVKQEAEIALGEANLPGIERPYKQALAEIDRGRGVEAVRDLIRLTEKAIASIRGPARMKAFQDKMSLVMQPKD*
Ga0105251_100886712	3300009011	Switchgrass Rhizosphere	MILCTRVKQEAEAALGEGNLPGSDRPYKQALAEIDKGRGGEAVRDLIRHTEKAISSIRGPAIMRAFQEKMSLVMQPRI*
Ga0105095_108291961	3300009053	Freshwater Sediment	PRGGPPGPGGLAGSVASSASAPAAGLLGDEKKILMILCTRVKQEAETAIGESNLPGLDRPYKQALAEIDRGRGVEAVRDLIRHTEKAISSIRGPAIMKAFQDKMSLVMQPKV*
Ga0105247_111296672	3300009101	Switchgrass Rhizosphere	LGDEKKILMILCTRVKQEAEAAMGEQNIPGIDRPYRQALAEIDRGRGIDSVRDFIRQTEQTISTLRGNGPMRAFQEKMALVMQPKSQ*
Ga0105242_131151211	3300009176	Miscanthus Rhizosphere	MILCTRVKQEAETAIGESNLPGIDRPYKQALAEIDRGRGVEAVRDLIRHTEKAISSIRGPAIMKAFQEKMSLVMQPKV*
Ga0105248_115792242	3300009177	Switchgrass Rhizosphere	CTRVKQEAEAAMGEQNLPGIDRPYRQALAEIDRGRGIDSVRDFIRQTEQTISSLRGEAPMRAFQEKMALVMQPKA*
Ga0126374_112182572	3300009792	Tropical Forest Soil	PAFRPAPPPSGGTSPGVLGDEKKILMILCTRVKQEAETAIGETNLPGIDRPYKQALAEIDRGRGVEAVRDLIRLTEKAISSIRGPAIMKAFQEKMSLVMQPKV*
Ga0126373_118271122	3300010048	Tropical Forest Soil	ITSGLVEMRSRDAARPLAAAQPPMLGDEKKILMILCTRVKQEAEIALGESNLPGIERPYKQALAEIDRGRGVEAVRDLIRLTEKAIASIRGPARMKAFQDKMSLVMQPKA*
Ga0126373_133217271	3300010048	Tropical Forest Soil	PAAAAPASPPPPVLGDEKKILMILCTRVKQEAELALGESYLPGIERPYKQALAEIDRGRGVEAVRDLIRLTEKAIASIRGPARMKAFQDKMSLVMQPKA*
Ga0126372_113026232	3300010360	Tropical Forest Soil	LIEMRSRDSIRQTAAPSAPTSPAVLGDEKKILMILCTRVKQEAELALGESNLPGIERPYKQALAEIDRGRGVEAVRDLIRLTEKAIASIRGPARMKAFQDKMSLVMQPKA*
Ga0126372_120492362	3300010360	Tropical Forest Soil	LCTRVKQEAEIALGEQNLPGIERPYKQALAEIDRGRGVEAVRDLIRATEKAISAIRGPARMKAFQDKMSLVMQPKA*
Ga0126379_104437702	3300010366	Tropical Forest Soil	VLGDEKKILMILCTRVKQEAETAIGESNLPGIDRPYKQALAEIDRGRGVEAVRDLIRQTEKAIASIRGPAIMRAFQEKMSLVMQPKV*
Ga0126379_105534791	3300010366	Tropical Forest Soil	TRVKQEAEGAIGESNLPGIDRPYKQALAEIDRGRGVEAVRDLIRHTEKAISSIRGPAIMRAFQEKMSLVMQPKV*
Ga0126379_121748111	3300010366	Tropical Forest Soil	GLVEMRPRESPVRAPVSPASAPIIPPGPLAPLGDEKKILMILCTRVKQEAEIAIGEPNLPGIERPYKQALAEIDRGRGVEAVRDLIRQTERTISSIRGPARMKSFQDKMSLVMQPKA*
Ga0126383_129406701	3300010398	Tropical Forest Soil	ILCTRVKQEAETIIGESNLPGIDRPYKQALAEIDRGRGVEAVRDLIRQTEKAIASIRGPAIMKAFQDKMSLVMQPKV*
Ga0137392_115375411	3300011269	Vadose Zone Soil	GDEKKILMILCTRVKQEAELALGEANLPGIERPYKQALAEIDRGRGVEAVRDLIRVTEKAIASIRGPARMKAFQDKMSLVMQPKA*
Ga0137365_105749682	3300012201	Vadose Zone Soil	AKQEAEVELVEADLRRIDKQKKQALAENDRGRGVEAVRDLIRLTEQAIASIRGPARMKAFQDKMSLVMQPKA*
Ga0157329_10447201	3300012491	Arabidopsis Rhizosphere	KQEAETAIGESNLPGLDRPYKQALAEIDRGRGVEAVRDLIRHTEKAISSIRGPAIMKAFQDKMSLVMQPKV*
Ga0136635_102110451	3300012530	Polar Desert Sand	RPSTSAPTPSPAALMGDEKKILMILCTRVKQEAEIALGESNLPGIEKPYKQALSEIDRGRGVEAVRDLIRQTEKAIASIRGPARMKAFQDKMSLVMQPKA*
Ga0137373_101275323	3300012532	Vadose Zone Soil	MILCTRVKQEAELALGEANLPGIERPYKQALAEIDRGRGVEAVRDLIRLTEKAIASIRGPARMKAFQDKMSLVMQPKA*
Ga0157310_104385361	3300012916	Soil	MLGDEKKILMILCTRVKQEAEAAVGEGNLPGIDRPYKQALAEIDKGRGVEAVRDLIRHTEKAIASIRGPAIMKTFQEKMSLVMQPRI*
Ga0126375_103644171	3300012948	Tropical Forest Soil	EKKILMILCTRVKQEAETAIGESNLPGIDRPYKQALAEIDHGRGVEAVRDLIRHTEKAISSIRGPAIMKAFQEKMSLVMQPKV*
Ga0126375_113178211	3300012948	Tropical Forest Soil	ASGAATSSGPVPPPTAPLLGDEKKILMILCTRVKQEAETIIGESNLPGIDRPYKQALAEIDRGRGVEAVRDLIRQTEKAISSIRGPAIMKAFQDKMSLVMQPKV*
Ga0164305_109537982	3300012989	Soil	MPAPPIPPVLGDEKKILMILCTRVKQEAETAIGESNLPGIDRPYKQALAEIDRGRGVEAVRDLIRQTEKAIASIRGPAIMKAFQEKMSLVMQPKV*
Ga0157374_126029392	3300013296	Miscanthus Rhizosphere	KQEAETAIGESNLPGIDRPYKQALAEIDRGRGVEAVRDLIRQTEKAIASIRGPAIMKAFQEKMSLVMQPKV*
Ga0163162_118649961	3300013306	Switchgrass Rhizosphere	KILMILCTRVKQEAEAAMGEQNLPGIDRPYRQALAEIDRGRGIDSVRDFIRQTEQTISSLRGEAPMRAFQEKMALVMQPKA*
Ga0163162_124190601	3300013306	Switchgrass Rhizosphere	CTRVKQEAEAAVGEGNLPGIDRPYKQALAEIDKGRGVEAVRDLIRHTEKAIASIRGPAIMKTFQEKMSLVMQPRI*
Ga0157375_104713982	3300013308	Miscanthus Rhizosphere	SGSAPAAAAAAMIGDEKKILMILCTRVKQEAEAALGEGNLPGIDRPYKQALAEIDKGRGVEAVRDLIRHTEKAISSIRGPAIMRAFQEKMSLVMQPRI*
Ga0120127_100312343	3300013503	Permafrost	MGDEKKILMILCTRVKQEAETAIGESNLPGIDRPYKQALAEIDRGRGVEAVRDLIRQTEKAISSIRGPAMMKAFQDKMSLVMQPKV*
Ga0120127_100379051	3300013503	Permafrost	MRSRDLPRPAPAAPPTAAATALLGDEKKILMILCTRVKQEAEIAIGESNLPAVERPYKQALAEIDHGRGVEAVRDLIRQTEKTISAIRG
Ga0075342_11476221	3300014320	Natural And Restored Wetlands	KILMILCTRVKQEAETAIGESNLPGLDRPYKQALAEIDRGRGVEAVRDLIRLTEKAISSIRGPAIMKAFQDKMSLVMQPKV*
Ga0163163_107249181	3300014325	Switchgrass Rhizosphere	KKILMILCTRVKQEAEAAMGEQNIPGIDRPYRQALAEIDRGRGIDSVRDFIRQTEQTISTLRGNGPMRAFQEKMALVMQPKSQ*
Ga0163163_111069571	3300014325	Switchgrass Rhizosphere	NSVLGDEKKILMILCTRVKQEAEGAIGEANLPGIDRPYKQAIAEIDRGRGVEAVRDLIRATEKAISSIRGPAIMKAFQEKMSLVMQPKV*
Ga0157380_101300341	3300014326	Switchgrass Rhizosphere	KILMILCTRVKQEAETAIGESNLPGIDRPYKQALAEIDRGRGVEAVRDLIRHTEKAISSIRGPAIMKAFQEKMSLVMQPKV*
Ga0157380_107493061	3300014326	Switchgrass Rhizosphere	GSMPTPPIPPVLGDEKKILMILCTRVKQEAETAIGESNLPGIDRPYKQALAEIDRGRGVEAVRDLMRQTEKAIASIRGPAIMKAFQEKMSLVMQPKV*
Ga0120104_10856852	3300014829	Permafrost	PSSAVLGDEKKILMILCTRVKQEAETAIGESNLPGIDRPYKQALAEIDRGRGVEAVRDLIRQTEKAISSIRGPAMMKAFQDKMSLVMQPKV*
Ga0157376_100590003	3300014969	Miscanthus Rhizosphere	GSAPAAAAAAMIGDEKKILMILCTRVKQEAEAALGEGNLPGIDRPYKQALAEIDKGRGVEAVRDLIRHTEKAISSIRGPAIMRAFQEKMSLVMQPRI*
Ga0157376_115180081	3300014969	Miscanthus Rhizosphere	TAGLAEMRSKETARPTAAPAPAAMLGDEKKILMILCTRVKQEAEVALGESNLPNLERPYRQALSEIDQGRGVEAVRDLIRQTEKAISALRGPARVKAFQDKMSLVMQPKV*
Ga0157376_121302992	3300014969	Miscanthus Rhizosphere	LGDEKKILMILCTRVKQEAEGAIGEANLPGIDRPYKQAIAEIDRGRGVEAVRDLIRATEKAISSIRGPAIMRAFQEKMSLVMQPKF*
Ga0167631_10344062	3300015168	Glacier Forefield Soil	QEAEGAIGESNLPGIDRPYKQALAEIDRGRGVEAVRDLIRSTEKAISSIRGPAIMRVFQEKMSLVMQPKV*
Ga0132258_101909215	3300015371	Arabidopsis Rhizosphere	PAGAAAHAAGSASMLGDEKKILMILCTRVKQEAEAAVGEGNLPGIDRPYKQALAEIDKGRGVEAVRDLIRHTEKAIASIRGPAIMKTFQEKMSLVMQPRI*
Ga0132258_106018901	3300015371	Arabidopsis Rhizosphere	MPTPPLPPVLGDEKKILMILCTRVKQEAETAIGESNLPGIDRPYKQALAEIDRGRGVEAVRDLIRQTEKAIASIRGPAIMKAFQEKMSLVMQPKV*
Ga0132256_1010110772	3300015372	Arabidopsis Rhizosphere	VLGDEKKILMILCTRVKQEAETAIGESNLPGIDRPYKQALAEIDRGRGVEAVRDLIRQTEKAIASIRGPAIMKAFQEKMSLVMQPKV*
Ga0132257_1012470362	3300015373	Arabidopsis Rhizosphere	SPAAAPVSAASLGDEKKILMILCTRVKQEAEATMGEQNLPGIDRPYRQALAEIDRGRGIESVRDFIRQTEQTISALRGSGPMRTFQEKMSLVMQPKT*
Ga0132257_1029771801	3300015373	Arabidopsis Rhizosphere	DEKKILMILCTRVKQEAEVALGESNLPNLERPYRQALSEIDQGRGVEAVRDLIRQTEKAISALRGPARVKAFQDKMSLVMQPKV*
Ga0132255_1033615301	3300015374	Arabidopsis Rhizosphere	MSGPASGSTPATAAAAMIGDEKKILMILCTRVKQEAEAALGEGNLPGIDRPYKQALAEIDKGRGVEAVRDLIRHTEKAISSIRGPAIMRAFQEKMSLVMQPRI*
Ga0132255_1034690082	3300015374	Arabidopsis Rhizosphere	ATVPAGGGSAASPASTPNPALMGDEKKILMILCTRVKQEAEIAIGESSLPGIERPYKQALGEIDRGRGVEAVRDLIRETEKTISSIKGPARMKVFQDKMSLVMQPKA*
Ga0132255_1053446441	3300015374	Arabidopsis Rhizosphere	GAGAPAGAAAHTAGSASMLGDEKKILMILCTRVKQEAEAAVGEGNLPGIDRPYKQALAEIDKGRGVEAVRDLIRHTEKAIASIRGPAIMKTFQEKMSLVMQPRI*
Ga0182032_111417492	3300016357	Soil	KQEAEGAIGEANLPGIDRPYKQALAEIDRGRGVEAVRDLIRQTEKAISSIQGPAIMRAFQEKMSLVMQPKV
Ga0187777_103362861	3300017974	Tropical Peatland	PAVPAPLGDEKKILMILCTRVKQEAELALGEQNLPGIERPYKQALAEIDKGRGVEAVRDLIRATEKAISAIRGPARMKAFQDKMSLVMQPKA
Ga0187777_107888542	3300017974	Tropical Peatland	EAEVALGESNLPNLERPYRQALSEIDQGRGVEAVRDLIRQTEKAISALRGPARVKAFQDKMSLVMQPKA
Ga0187823_101010182	3300017993	Freshwater Sediment	LVAADLVELRTKDSPRPAPAAQAPASLGDEKKILMILCTRVKQEAEATMGEQNLPGIDRPYRQALAEIDRGRGIEAVRDFIRQTEQTISALRGATPMRAFQEKMSLVMQPKI
Ga0187787_100859562	3300018029	Tropical Peatland	AKVLYGLITPGLAEMRSRETHRPTATATSGAVLGDEKKILMILCTRVKQEAEVALGESNLPNLERPYRQALTEIDQGRGVEAVRDLIRQTEKAISALRGPARVKAFQDKMSLVMQPKV
Ga0184612_105264192	3300018078	Groundwater Sediment	SAPASAAPPATAAPKAESSPAASRPVLGDEKKILMILCTRVKQEAETAIGESNLPAIDRPYKQALAEIDRGRGVEAVRDLIRQTEKAISAIRGPVMMKAFQDKMSLVMQPKV
Ga0210382_102989092	3300021080	Groundwater Sediment	KILMILCTRVKQEAETAIGESNLPGVDRPYKMALAEIDRGRGVEAVRDLIRQTEKAISSIRGPAIMKAFQEKMSLVMQPKV
Ga0182009_100106263	3300021445	Soil	AASLGDEKKILMILCTRVKQEAETAMGEQNIPGIDRPYRQALAEIDRGRGIESVRDFIRQTEQTISTLRGNGPMRAFQEKMSLVMQPRSQ
Ga0210402_118714921	3300021478	Soil	CTRVKQEAETAIGKSNLPGIDRPYKQALAEIDRGRGVEAVRDLIRQTEKAIASIRGPAIMKTFQDKMSLVMQPKV
Ga0207656_104689291	3300025321	Corn Rhizosphere	EKKILMILCTRVKQEAEAALGEGNLPGIDRPYKQALAEIDKGRGVEAVRDLIRHTEKAISSIRGPAIMRAFQEKMSLVMQPRI
Ga0207699_113543161	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	ASPGSTMLGDEKKILMILCTRVKQEAEAALGEANLPGVDRPYKQALAEIDKGRGVEAVRDLIRHTEKAIASIRGPAIMKTFQEKMSLVMQPRI
Ga0207663_105532661	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	PSSPAAVPAATPAALGDEKKILMILCTRVKQEAEATMGEQNLPGIDRPYRQALAEIDRGRGIESVREFIRQTEQTISALRGAAPMRAFQEKMSLVMQPKA
Ga0207681_113722891	3300025923	Switchgrass Rhizosphere	TRVKQEAEAAVGEGNLPGIDRPYKQALAEIDKGRGVEAVRDLIRHTEKAIASIRGPAIMKTFQEKMSLVMQPRI
Ga0207690_116534161	3300025932	Corn Rhizosphere	MSGPASGSTPAAAAAAMIGDEKKILMILCTRVKQEAEAALGEANLPGVDRPYKQALAEIDKGRGVEAVRDLIRHTEKAIASIRGPAIMKTFKE
Ga0207686_104577801	3300025934	Miscanthus Rhizosphere	DEKKILMILCTRVKQEAETAIGESNLPGIDRPYKQALAEIDRGRGVEAVRDLIRHTEKAISSIRGPAIMKAFQEKMSLVMQPKV
Ga0207709_100694443	3300025935	Miscanthus Rhizosphere	GSPSGSMPTPPIPPVLGDEKKILMILCTRVKQEAETAIGESNLPGIDRPYKQALAEIDRGRGVEAVRDLIRQTEKAIASIRGPAIMKAFQEKMSLVMQPKV
Ga0207711_100607363	3300025941	Switchgrass Rhizosphere	GSAPAAAAAAMIGDEKKILMILCTRVKQEAEAALGEGNLPGIDRPYKQALAEIDKGRGVEAVRDLIRHTEKAISSIRGPAIMRAFQEKMSLVMQPRI
Ga0207668_120812611	3300025972	Switchgrass Rhizosphere	EAEAALGEGNLPGIDRPYKQALAEIDKGRGVEAVRDLIRHTEKAISSIRGPAIMRAFQEKMSLVMQPRI
Ga0207658_107531391	3300025986	Switchgrass Rhizosphere	YGLVAADLVELRAAEVRVAPGPPAPSPAAAAPSVSTASLGDEKKILMILCTRVKQEAEAAMGEQNIPGIDRPYRQALAEIDRGRGIDSVRDFIRQTEQTISTLRGNGPMRAFQEKMSLVMQPKSQ
Ga0208773_10132661	3300026034	Rice Paddy Soil	GDEKKILMILCTRVKQEAEAAMGEQNLPGIDRPYRQALAEIDRGRGIESVRDFIRQTEQTISALRGTAPMRTFQEKMALVMQPKA
Ga0207676_105641191	3300026095	Switchgrass Rhizosphere	ILMILCTRVKQEAEGAIGEANLPGIDRPYKQAIAEIDRGRGVEAVRDLIRATEKAISSIRGPAIMKAFQEKMSLVMQPKV
Ga0207683_106980141	3300026121	Miscanthus Rhizosphere	ETAIGESNLPGIDRPYKQALAEIDRGRGVEAVRDLIRQTEKAIASIRGPAIMKAFQEKMSLVMQPKV
Ga0209881_11654302	3300026273	Soil	DSPRPAPAAPSPAPAALGDEKKILMILCTRVKQEAEATMGEQNLPGIDRPYRQALAEIDRGRGIEAVRDFIRQTEQTISALRGATPMRAFQEKMSLVMQPKS
Ga0209884_10413411	3300027013	Groundwater Sand	KKILMILCTRVKQEAETAIGESNLPGIERPYKQALAEIDKGRGVEAVRDLIRHTEKAISSIRGPAIMRAFQDKMSLVMQPKV
Ga0209465_103032881	3300027874	Tropical Forest Soil	TRVKQEAEGAIGEANLPGIDRPYKQALAEIDRGRGVEAVRDLIRQTEKAISSIRGPAIMRAFQEKMSLVMQPKV
Ga0268266_100732383	3300028379	Switchgrass Rhizosphere	KKILMILCTRVKQEAETAIGESNLPGIDRPYKQALAEIDRGRGVEAVRDLIRQTEKAIASIRGPAIMKAFQEKMSLVMQPKV
Ga0268266_101749752	3300028379	Switchgrass Rhizosphere	LMILCTRVKQEAEAALGEGNLPGIDRPYKQALAEIDKGRGVEAVRDLIRHTEKAISSIRGPAIMRAFQEKMSLVMQPRI
Ga0247818_112470612	3300028589	Soil	SGPLAASAGVMGDEKKILMILCTRVKQEAETAIGESNLPGVDRPYKMALAEIDKGRGVEAVRDLIRQTEKAISSIRGPAIMKAFQEKMSLVMQPKV
Ga0302046_105252612	3300030620	Soil	EELARAADSNSFDTAKVLYGLVTANLVAFKSREMAARAAAPSAPVAPAILGDEKKILMILCTRVKQEAEIALGESNLPGIDRPYKQALAEIDRGRGVEAVRDLIRQTESAISSIRGPAMMKVFQDKMSLVMQPKA
Ga0318516_108682481	3300031543	Soil	LMILCTRVKQEAEGAIGEANLPGIDRPYKQALAEIDRGRGVEAVRDLIRHTEKAISSIRGPAIMRAFQEKMSLVMQPKV
Ga0318534_105204141	3300031544	Soil	AAPAEPPPARPAGVPSAAASGGGGTPVLGDEKKILMILCTRVKQEAEGAIGEANLPGIDRPYKQALAEIDRGRGVEAVRDLIRQTEKAISSIRGPAIMRAFQEKMSLVMQPKV
Ga0318572_106295802	3300031681	Soil	ASSAAVPGAGGSAVLGDEKKILMILCTRVKQEAEGAIGEANLPGIDRPYKQALAEIDRGRGVEAVRDLIRHTEKAISSIRGPAIMRAFQEKMSLVMQPKV
Ga0307469_109229991	3300031720	Hardwood Forest Soil	RDSVRPTSTAPGPSPSPAVLGDEKKILMILCTRVKQEAELALGEANLPGIDRPYKQALAEIDRGRGVEAVRDLIRLTEKAIASIRGPARMKAFQDKMSLVMQPKA
Ga0307469_112837631	3300031720	Hardwood Forest Soil	MPAPPIPPVLGDEKKILMILCTRVKQEAETAIGESNLPGIDRPYKQALAEIDRGRGVEAVRDLIRQTEKAISSIRGPAIMKAFQEKMSLVMQPKV
Ga0318502_101428211	3300031747	Soil	LVEMRSRDAVAARQPTGSTPAVPAPLGDEKKILMILCTRVKQEAELALGEQNLPGIERPYKQALAEIDKGRGVEAVRDLIRATEKAISAIRGPARMKAFQDKMSLVMQPKA
Ga0307473_114737712	3300031820	Hardwood Forest Soil	KKILMILCTRVKQEAELALGEQNLPGIERPYKQALAEIDRGRGVEAVRDLIRATEKAISAIRGPARMKAFQDKMSLVMQPKA
Ga0318562_106229901	3300032008	Soil	PARPAPAAALGGGGTNVLGDEKKILMILCTRVKQEAEGAIGEANLPGIDRPYKQALAEIDRGRGVEAVRDLIRQTEKAISSIRGPAIMRAFQEKMSLVMQPKV
Ga0318558_105538772	3300032044	Soil	ILCTRVKQEAEGAIGEANLPGIDRPYKQALAEIDRGRGVEAVRDLIRHTEKAISSIRGPAIMRAFQEKMSLVMQPKV
Ga0318514_104873351	3300032066	Soil	KKILMILCTRVKQEAEGAIGEANLPGIDRPYKQALAEIDRGRGVEAVRDLIRHTEKAISSIRGPAIMRAFQEKMSLVMQPKV
Ga0318524_107130871	3300032067	Soil	VLGDEKKILMILCTRVKQEAEGAIGEANLPGIDRPYKQALAEIDRGRGVEAVRDLIRHTEKAISSIRGPAIMRAFQEKMSLVMQPKV
Ga0306924_115616922	3300032076	Soil	AGLVEMRSRDAVAARQPTGSTPAVPAPLGDEKKILMILCTRVKQEAELALGEQNLPGIERPYKQALAEIDKGRGVEAVRDLIRATEKAISAIRGPARMKAFQDKMSLVMQPKA
Ga0307470_114738761	3300032174	Hardwood Forest Soil	VLYGMITAGVAEMRSRETARPTASSPAPAAMLGDEKKILMILCTRVKQEAEVALGESNLPNLERPYRQALTEIDQGRGVEAVRDLIRQTEKAISALRGPARVKAFQDKMSLVMQPKV
Ga0307470_115153431	3300032174	Hardwood Forest Soil	KVLYGLITAGLAEMRSKATARPTAAPAPAAMLGDEKKILMILCTRVKQEAEVALGESNLPNLERPYRQALSEIDQGRGVEAVRDLIRQTEKAISALRGPARVKAFQDKMSLVMQPKV
Ga0307472_1008989461	3300032205	Hardwood Forest Soil	LCTRVKQEAEGAIGEANLPGIDRPYKQAIAEIDRGRGVEAVRDLIRATEKAISSIRGPAIMRAFQEKMSLVMQPKV
Ga0315271_109208302	3300032256	Sediment	QAPARPGAASPSAAQPGSGVLGDEKKILMILCTRVKQEAEGAIGESNLPGIERPYKQALAEIDKGRGVEAVRDLIRQTEKAISSIRGPAIMRTFQEKMSLVMQPKV
Ga0306920_1042901212	3300032261	Soil	KKILMILCTRVKQEAELALGEQNLPGIERPYKQALAEIDKGRGVEAVRDLIRATEKAISAIRGPARMKAFQDKMSLVMQPKA
Ga0315270_108188441	3300032275	Sediment	PASAQAPARPGAASPSAAQPGSGVLGDEKKILMILCTRVKQEAEGAIGESNLPGIERPYKQALAEIDKGRGVEAVRDLIRQTEKAISSIRGPAIMRTFQEKMSLVMQPKV
Ga0315273_120510822	3300032516	Sediment	SPAPAAGGPAPPPLRPGASTTNVLGDEKKILMILCTRVKQEAEGAIGEANLPGIDRPYKQALAEIDKGRGVEAVRDLIRQTEKAISSIRGPAIMRTFQEKMSLVMQPKV
Ga0335082_109229861	3300032782	Soil	RDAVRAPAASAAAPINDDKKILMILCTRVKQEAEAAVGEQNLSGLDRPYRQALTEIDRGRGIEAVRELIRQTEQTISAMRGTGPMRAFQEKMSLVMQSRS
Ga0326726_109904611	3300033433	Peat Soil	KKILMILCTRVKQEAEVALGESSLPNLERPYRQALSEIDQGRGVEAVRDLIRQTEKAISALRGPARVKAFQDKMSLVMQPKA
Ga0326732_10385031	3300033501	Peat Soil	GGGSPAPLGDEKKILMILCTRVKQEAEGAIGESNLPGIERPYKQALAEIDRGRGVEAVRDLIRHTEKAISSIRGPAIMRAFQEKMSLVMQPKV
Ga0364930_0341203_50_478	3300033814	Sediment	VIHIDGKRSLEDLARAMGSSSFETAKVLYGMITAGVAEIRSRGTARPTTAPAPAAMLGDEKKILMILCTRVKQEAEVALGESNLPNLERPYRQALTEIDQGRGVEAVRDLIRQTEKAISALRGPARVKAFQDKMSLVMQPKA

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F061235

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign