Metagenome / Metatranscriptome Family F061226

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F061226
Family Type	Metagenome / Metatranscriptome
Number of Sequences	132
Average Sequence Length	45 residues
Representative Sequence	LNLAIRRALYDVSLAQLAGLDAPPARLPALEREMKAAAARTRLR
Number of Associated Samples	120
Number of Associated Scaffolds	132

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	99.24 %
% of genes from short scaffolds (< 2000 bps)	90.91 %
Associated GOLD sequencing projects	115
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.40

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (61.364 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (28.788 % of family members)
Environment Ontology (ENVO)	Unclassified (29.545 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (41.667 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 41.67% β-sheet: 0.00% Coil/Unstructured: 58.33%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.40
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.40
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 132 Family Scaffolds
PF01458	SUFBD	27.27
PF00005	ABC_tran	4.55
PF14528	LAGLIDADG_3	1.52
PF03313	SDH_alpha	0.76

COG ID	Name	Functional Category	% Frequency in 132 Family Scaffolds
COG0719	Fe-S cluster assembly scaffold protein SufB	Posttranslational modification, protein turnover, chaperones [O]	27.27
COG1760	L-serine deaminase	Amino acid transport and metabolism [E]	0.76

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.36 %
All Organisms	root	All Organisms	38.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.36 %
cellular organisms	root	All Organisms → cellular organisms	38.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.36 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	38.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.36 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	14.39 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	12.88 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.76 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.36 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	14.39 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	7.58 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.76 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.76 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.36 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	14.39 %
Nevskiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales	2.27 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.76 %
unclassified Planctomycetota	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota	0.76 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.36 %
Nostocales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales	14.39 %
Steroidobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae	2.27 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.76 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	0.76 %
Bacteroidia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.36 %
Tolypothrichaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Tolypothrichaceae	14.39 %
Steroidobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter	2.27 %
Hydrogenophaga	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Hydrogenophaga	0.76 %
Bacteroidales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales	0.76 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.36 %
Tolypothrix	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Tolypothrichaceae → Tolypothrix	14.39 %
Steroidobacter denitrificans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	2.27 %
unclassified Hydrogenophaga	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Hydrogenophaga → unclassified Hydrogenophaga	0.76 %
Prevotellaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Prevotellaceae	0.76 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.36 %
Tolypothrix campylonemoides	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Tolypothrichaceae → Tolypothrix → Tolypothrix campylonemoides	14.39 %
Steroidobacter denitrificans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	2.27 %
Prevotella	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Prevotellaceae → Prevotella	0.76 %
Hydrogenophaga sp. T4	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Hydrogenophaga → unclassified Hydrogenophaga → Hydrogenophaga sp. T4	0.76 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.36 %
Tolypothrix campylonemoides VB511288	strain	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Tolypothrichaceae → Tolypothrix → Tolypothrix campylonemoides → Tolypothrix campylonemoides VB511288	14.39 %
Steroidobacter denitrificans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	2.27 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Prevotellaceae → Prevotella → environmental samples	0.76 %
Hydrogenophaga sp. T4	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Hydrogenophaga → unclassified Hydrogenophaga → Hydrogenophaga sp. T4	0.76 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.36 %
Tolypothrix campylonemoides VB511288	strain	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Tolypothrichaceae → Tolypothrix → Tolypothrix campylonemoides → Tolypothrix campylonemoides VB511288	14.39 %
Steroidobacter denitrificans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	2.27 %
Prevotella sp. CAG:1124	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Prevotellaceae → Prevotella → environmental samples → Prevotella sp. CAG:1124	0.76 %
Hydrogenophaga sp. T4	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Hydrogenophaga → unclassified Hydrogenophaga → Hydrogenophaga sp. T4	0.76 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.76 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001166\|JGI12694J13545_1003043	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Tolypothrichaceae → Tolypothrix → Tolypothrix campylonemoides → Tolypothrix campylonemoides VB511288	2117	Open in IMG/M
3300001867\|JGI12627J18819_10372371	Not Available	579	Open in IMG/M
3300004092\|Ga0062389_101853851	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Tolypothrichaceae → Tolypothrix → Tolypothrix campylonemoides → Tolypothrix campylonemoides VB511288	782	Open in IMG/M
3300004479\|Ga0062595_100276046	All Organisms → cellular organisms → Bacteria	1113	Open in IMG/M
3300004479\|Ga0062595_102250519	All Organisms → cellular organisms → Bacteria → Proteobacteria	536	Open in IMG/M
3300004633\|Ga0066395_10671311	Not Available	613	Open in IMG/M
3300005364\|Ga0070673_101783693	Not Available	583	Open in IMG/M
3300005439\|Ga0070711_100573596	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Tolypothrichaceae → Tolypothrix → Tolypothrix campylonemoides → Tolypothrix campylonemoides VB511288	938	Open in IMG/M
3300005467\|Ga0070706_101704326	Not Available	574	Open in IMG/M
3300005526\|Ga0073909_10239476	Not Available	802	Open in IMG/M
3300005538\|Ga0070731_10486542	Not Available	821	Open in IMG/M
3300005545\|Ga0070695_100693209	Not Available	808	Open in IMG/M
3300005548\|Ga0070665_101933046	Not Available	596	Open in IMG/M
3300005548\|Ga0070665_102372785	Not Available	533	Open in IMG/M
3300005563\|Ga0068855_102525358	Not Available	511	Open in IMG/M
3300005577\|Ga0068857_102317583	Not Available	527	Open in IMG/M
3300005602\|Ga0070762_10070658	All Organisms → cellular organisms → Bacteria	1965	Open in IMG/M
3300005764\|Ga0066903_105531150	Not Available	666	Open in IMG/M
3300005764\|Ga0066903_107220827	Not Available	575	Open in IMG/M
3300005841\|Ga0068863_101359368	Not Available	718	Open in IMG/M
3300005921\|Ga0070766_11305790	Not Available	503	Open in IMG/M
3300006172\|Ga0075018_10729500	Not Available	538	Open in IMG/M
3300006806\|Ga0079220_11537790	All Organisms → cellular organisms → Bacteria → Proteobacteria	573	Open in IMG/M
3300006954\|Ga0079219_11537479	Not Available	605	Open in IMG/M
3300007258\|Ga0099793_10583357	Not Available	559	Open in IMG/M
3300010043\|Ga0126380_10208321	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Hydrogenophaga → unclassified Hydrogenophaga → Hydrogenophaga sp. T4	1316	Open in IMG/M
3300010049\|Ga0123356_11992197	Not Available	724	Open in IMG/M
3300010322\|Ga0134084_10092232	Not Available	956	Open in IMG/M
3300010343\|Ga0074044_10808426	Not Available	612	Open in IMG/M
3300010358\|Ga0126370_10693245	Not Available	894	Open in IMG/M
3300010358\|Ga0126370_11255243	Not Available	692	Open in IMG/M
3300010366\|Ga0126379_11143044	Not Available	885	Open in IMG/M
3300010373\|Ga0134128_11226047	Not Available	827	Open in IMG/M
3300010376\|Ga0126381_101484672	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Tolypothrichaceae → Tolypothrix → Tolypothrix campylonemoides → Tolypothrix campylonemoides VB511288	980	Open in IMG/M
3300010376\|Ga0126381_103064879	Not Available	663	Open in IMG/M
3300010398\|Ga0126383_10576881	Not Available	1193	Open in IMG/M
3300010401\|Ga0134121_12448075	Not Available	563	Open in IMG/M
3300012971\|Ga0126369_13173290	Not Available	538	Open in IMG/M
3300012986\|Ga0164304_10384305	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Tolypothrichaceae → Tolypothrix → Tolypothrix campylonemoides → Tolypothrix campylonemoides VB511288	992	Open in IMG/M
3300013297\|Ga0157378_11449853	Not Available	730	Open in IMG/M
3300013307\|Ga0157372_12317176	Not Available	617	Open in IMG/M
3300014325\|Ga0163163_12725756	Not Available	551	Open in IMG/M
3300015054\|Ga0137420_1110665	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Tolypothrichaceae → Tolypothrix → Tolypothrix campylonemoides → Tolypothrix campylonemoides VB511288	1296	Open in IMG/M
3300015374\|Ga0132255_102487282	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Prevotellaceae → Prevotella → environmental samples → Prevotella sp. CAG:1124	791	Open in IMG/M
3300016294\|Ga0182041_11000000	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Tolypothrichaceae → Tolypothrix → Tolypothrix campylonemoides → Tolypothrix campylonemoides VB511288	756	Open in IMG/M
3300016387\|Ga0182040_11334302	Not Available	606	Open in IMG/M
3300016445\|Ga0182038_11844433	Not Available	546	Open in IMG/M
3300017927\|Ga0187824_10302148	Not Available	567	Open in IMG/M
3300017930\|Ga0187825_10190902	Not Available	735	Open in IMG/M
3300017947\|Ga0187785_10259284	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	783	Open in IMG/M
3300017959\|Ga0187779_11188880	Not Available	536	Open in IMG/M
3300018007\|Ga0187805_10457290	Not Available	596	Open in IMG/M
3300018086\|Ga0187769_10108960	All Organisms → cellular organisms → Bacteria → Proteobacteria	1997	Open in IMG/M
3300019273\|Ga0187794_1640805	Not Available	521	Open in IMG/M
3300020076\|Ga0206355_1431584	Not Available	524	Open in IMG/M
3300021168\|Ga0210406_10887035	Not Available	672	Open in IMG/M
3300021171\|Ga0210405_10299121	All Organisms → cellular organisms → Bacteria	1272	Open in IMG/M
3300021171\|Ga0210405_11041292	Not Available	615	Open in IMG/M
3300021402\|Ga0210385_10486872	Not Available	934	Open in IMG/M
3300021420\|Ga0210394_10249784	All Organisms → cellular organisms → Bacteria	1552	Open in IMG/M
3300022525\|Ga0242656_1024361	Not Available	928	Open in IMG/M
3300022910\|Ga0247768_1055669	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Tolypothrichaceae → Tolypothrix → Tolypothrix campylonemoides → Tolypothrix campylonemoides VB511288	1233	Open in IMG/M
3300022917\|Ga0247777_1032719	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1900	Open in IMG/M
3300023169\|Ga0247762_1086515	Not Available	870	Open in IMG/M
3300025905\|Ga0207685_10701639	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	551	Open in IMG/M
3300025906\|Ga0207699_10134238	All Organisms → cellular organisms → Bacteria	1619	Open in IMG/M
3300025910\|Ga0207684_11383564	Not Available	576	Open in IMG/M
3300025915\|Ga0207693_10781985	Not Available	736	Open in IMG/M
3300025928\|Ga0207700_10115889	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2164	Open in IMG/M
3300025931\|Ga0207644_10078714	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2430	Open in IMG/M
3300025939\|Ga0207665_10518899	Not Available	922	Open in IMG/M
3300025942\|Ga0207689_11147579	Not Available	655	Open in IMG/M
3300025981\|Ga0207640_12005088	Not Available	524	Open in IMG/M
3300026330\|Ga0209473_1330558	Not Available	509	Open in IMG/M
3300026333\|Ga0209158_1175054	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Tolypothrichaceae → Tolypothrix → Tolypothrix campylonemoides → Tolypothrix campylonemoides VB511288	773	Open in IMG/M
3300026547\|Ga0209156_10381461	Not Available	595	Open in IMG/M
3300027297\|Ga0208241_1014984	Not Available	1122	Open in IMG/M
3300027546\|Ga0208984_1025799	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Tolypothrichaceae → Tolypothrix → Tolypothrix campylonemoides → Tolypothrix campylonemoides VB511288	1210	Open in IMG/M
3300027821\|Ga0209811_10011063	All Organisms → cellular organisms → Bacteria → Proteobacteria	2900	Open in IMG/M
3300027867\|Ga0209167_10249750	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Tolypothrichaceae → Tolypothrix → Tolypothrix campylonemoides → Tolypothrix campylonemoides VB511288	952	Open in IMG/M
3300028379\|Ga0268266_10576679	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Tolypothrichaceae → Tolypothrix → Tolypothrix campylonemoides → Tolypothrix campylonemoides VB511288	1079	Open in IMG/M
3300028379\|Ga0268266_11838753	Not Available	580	Open in IMG/M
3300028380\|Ga0268265_11572258	Not Available	662	Open in IMG/M
3300030490\|Ga0302184_10271130	Not Available	689	Open in IMG/M
3300030617\|Ga0311356_11459298	Not Available	620	Open in IMG/M
3300031231\|Ga0170824_101741708	Not Available	527	Open in IMG/M
3300031231\|Ga0170824_105834946	Not Available	518	Open in IMG/M
3300031564\|Ga0318573_10099523	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Tolypothrichaceae → Tolypothrix → Tolypothrix campylonemoides → Tolypothrix campylonemoides VB511288	1490	Open in IMG/M
3300031573\|Ga0310915_10925340	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	610	Open in IMG/M
3300031590\|Ga0307483_1011385	Not Available	789	Open in IMG/M
3300031640\|Ga0318555_10718966	Not Available	539	Open in IMG/M
3300031679\|Ga0318561_10547400	Not Available	637	Open in IMG/M
3300031680\|Ga0318574_10377928	Not Available	827	Open in IMG/M
3300031713\|Ga0318496_10035935	Not Available	2524	Open in IMG/M
3300031718\|Ga0307474_10099238	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	2176	Open in IMG/M
3300031723\|Ga0318493_10107685	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Tolypothrichaceae → Tolypothrix → Tolypothrix campylonemoides → Tolypothrix campylonemoides VB511288	1406	Open in IMG/M
3300031747\|Ga0318502_10098484	Not Available	1618	Open in IMG/M
3300031751\|Ga0318494_10572712	Not Available	660	Open in IMG/M
3300031763\|Ga0318537_10047730	All Organisms → cellular organisms → Bacteria	1549	Open in IMG/M
3300031769\|Ga0318526_10372884	Not Available	583	Open in IMG/M
3300031771\|Ga0318546_10731299	Not Available	696	Open in IMG/M
3300031779\|Ga0318566_10014375	All Organisms → cellular organisms → Bacteria → Proteobacteria	3382	Open in IMG/M
3300031781\|Ga0318547_10663509	Not Available	648	Open in IMG/M
3300031798\|Ga0318523_10089472	Not Available	1500	Open in IMG/M
3300031805\|Ga0318497_10822528	Not Available	521	Open in IMG/M
3300031819\|Ga0318568_10588786	Not Available	693	Open in IMG/M
3300031833\|Ga0310917_10543316	Not Available	790	Open in IMG/M
3300031846\|Ga0318512_10092582	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	1412	Open in IMG/M
3300031890\|Ga0306925_10017787	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	7031	Open in IMG/M
3300031890\|Ga0306925_10543846	All Organisms → cellular organisms → Bacteria	1232	Open in IMG/M
3300031910\|Ga0306923_11342273	Not Available	756	Open in IMG/M
3300031941\|Ga0310912_10090836	All Organisms → cellular organisms → Bacteria → Proteobacteria	2233	Open in IMG/M
3300031941\|Ga0310912_10275597	Not Available	1299	Open in IMG/M
3300031962\|Ga0307479_10341902	All Organisms → cellular organisms → Bacteria	1479	Open in IMG/M
3300031981\|Ga0318531_10185548	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Tolypothrichaceae → Tolypothrix → Tolypothrix campylonemoides → Tolypothrix campylonemoides VB511288	936	Open in IMG/M
3300032010\|Ga0318569_10065218	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Tolypothrichaceae → Tolypothrix → Tolypothrix campylonemoides → Tolypothrix campylonemoides VB511288	1603	Open in IMG/M
3300032035\|Ga0310911_10192227	Not Available	1159	Open in IMG/M
3300032051\|Ga0318532_10035786	All Organisms → cellular organisms → Bacteria	1672	Open in IMG/M
3300032051\|Ga0318532_10159295	Not Available	802	Open in IMG/M
3300032052\|Ga0318506_10052927	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	1643	Open in IMG/M
3300032063\|Ga0318504_10463154	Not Available	606	Open in IMG/M
3300032064\|Ga0318510_10174588	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Tolypothrichaceae → Tolypothrix → Tolypothrix campylonemoides → Tolypothrix campylonemoides VB511288	858	Open in IMG/M
3300032066\|Ga0318514_10021734	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2923	Open in IMG/M
3300032066\|Ga0318514_10547103	Not Available	616	Open in IMG/M
3300032076\|Ga0306924_10660024	All Organisms → cellular organisms → Bacteria	1178	Open in IMG/M
3300032090\|Ga0318518_10462619	Not Available	650	Open in IMG/M
3300032126\|Ga0307415_102466012	Not Available	512	Open in IMG/M
3300032180\|Ga0307471_100561333	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Tolypothrichaceae → Tolypothrix → Tolypothrix campylonemoides → Tolypothrix campylonemoides VB511288	1297	Open in IMG/M
3300032895\|Ga0335074_10536382	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Tolypothrichaceae → Tolypothrix → Tolypothrix campylonemoides → Tolypothrix campylonemoides VB511288	1197	Open in IMG/M
3300032898\|Ga0335072_10138894	All Organisms → cellular organisms → Bacteria	3007	Open in IMG/M
3300032955\|Ga0335076_10410265	All Organisms → cellular organisms → Bacteria	1239	Open in IMG/M
3300033134\|Ga0335073_10178091	All Organisms → cellular organisms → Bacteria	2663	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	86.36%
Host-Associated	Host-Associated	13.64%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	82.58%
Plants	Host-Associated → Plants	12.88%
Aquatic	Environmental → Aquatic	3.79%
Arthropoda	Host-Associated → Arthropoda	0.76%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	78.79%
Rhizosphere	Host-Associated → Plants → Rhizosphere	6.82%
Rhizoplane	Host-Associated → Plants → Rhizoplane	5.30%
Freshwater	Environmental → Aquatic → Freshwater	3.03%
Plant Litter	Environmental → Terrestrial → Plant Litter	2.27%
Peat	Environmental → Terrestrial → Peat	1.52%
Sediment	Environmental → Aquatic → Sediment	0.76%
Digestive System	Host-Associated → Arthropoda → Digestive System	0.76%
Roots	Host-Associated → Plants → Roots	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	58.33%
Loam	Environmental → Terrestrial → Soil → Loam	13.64%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	6.82%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.55%
Soil	Host-Associated → Plants → Rhizosphere → Soil	4.55%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	3.03%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	2.27%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.27%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	1.52%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.76%
Gut	Host-Associated → Arthropoda → Digestive System → Gut	0.76%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.76%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.76%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	38.64%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	14.39%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	6.82%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.82%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.82%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.55%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	4.55%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.03%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	2.27%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.27%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	2.27%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.27%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	1.52%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.76%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.76%
Unclassified	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified	0.76%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.76%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.76%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	28.79%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.82%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	6.06%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.30%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	4.55%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	3.03%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.03%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	3.03%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	3.03%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	2.27%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.27%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	2.27%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.27%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	2.27%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.27%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.52%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.52%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.52%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.52%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.52%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.52%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	1.52%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.52%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.76%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.76%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.76%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.76%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	0.76%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.76%
Termite Gut	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified → Termite Gut	0.76%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.76%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.76%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.76%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.76%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.76%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.76%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001166	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_O2	Environmental	Open in IMG/M
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010049	Embiratermes neotenicus P3 segment gut microbial communities from Petit-Saut dam, French Guiana - Emb289 P3	Host-Associated	Open in IMG/M
3300010322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300015054	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017927	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_4	Environmental	Open in IMG/M
3300017930	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_5	Environmental	Open in IMG/M
3300017947	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_4_20_MG	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300018007	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300019273	Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020076	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v3)	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300022525	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-4-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022910	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L016-104C-6	Environmental	Open in IMG/M
3300022917	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L154-409C-5	Environmental	Open in IMG/M
3300023169	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L081-202R-4	Environmental	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026330	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133 (SPAdes)	Environmental	Open in IMG/M
3300026333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140 (SPAdes)	Environmental	Open in IMG/M
3300026547	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 (SPAdes)	Environmental	Open in IMG/M
3300027297	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF047 (SPAdes)	Environmental	Open in IMG/M
3300027546	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M3 (SPAdes)	Environmental	Open in IMG/M
3300027821	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027867	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300030490	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_N3_3	Environmental	Open in IMG/M
3300030617	II_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031590	Metatranscriptome of hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031769	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f24	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032051	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f26	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032126	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2	Host-Associated	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032895	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3	Environmental	Open in IMG/M
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12694J13545_10030431	3300001166	Forest Soil	VSLAQLAGLDAAPARLPALEREMKAVATRAPARS*
JGI12627J18819_103723711	3300001867	Forest Soil	RRALYDVSLAQLAGLDTPPGRLPTLEREMKAAAARTRLR*
Ga0062389_1018538511	3300004092	Bog Forest Soil	RVWQRLNLAIRRALYDISLAQLAGLDAPPARLPTLEREMKAAASRTPVRS*
Ga0062595_1002760462	3300004479	Soil	LAIRRSLNDVSLAQLAGLEAAPARLPTLEREMKAVGSRTPVRS*
Ga0062595_1022505191	3300004479	Soil	GQCEIEETCRVGRVWQRLNLAIRRALYDVTLAQLAGLDAPPARLPTLEREMKAAAARTPLRQRTEFNT*
Ga0066395_106713111	3300004633	Tropical Forest Soil	VWQRLNLAIRRALYDVSLAQLAGLDAAPARLPALEREMKAAATRTPVRS*
Ga0070673_1017836932	3300005364	Switchgrass Rhizosphere	RRSLNDVSLAQLAGLEAAPARLPTLEREMKAVGSRTPVRS*
Ga0070711_1005735961	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	VGRVWQRLNLAIRRALYDVTLAQLAGLDAPPARLPTLEREMKAAALRTRLR*
Ga0070706_1017043262	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	RLNLAIRRSLHDVSLAQLAGLDAAPARLPALERDMKAAAARPPVRS*
Ga0073909_102394762	3300005526	Surface Soil	WQRLNLAILRTLHDVSLAQLAGLDAPPARLATLEREMKAAAARTPLR*
Ga0070731_104865422	3300005538	Surface Soil	LYDVNLAQLAGLESAPARLPTLEREMKAGTRTPARS*
Ga0070695_1006932091	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	VWQRLNLAILRALHDVSLAQLAGLDAPPARLATLEREMKAAAARTPLR*
Ga0070665_1019330461	3300005548	Switchgrass Rhizosphere	KSCRVGHAWQRLNLTIRRSLHEVTLAQLAGIDQSQPRVLALERDMKAAAARAQSRSS*
Ga0070665_1023727852	3300005548	Switchgrass Rhizosphere	RRSLHEVSLAQLAGLAAEPPRVLALERDMKAAAARPLSRS*
Ga0068855_1025253581	3300005563	Corn Rhizosphere	RLNLAIRRSLYDVSLAQLAGIDPTQVTLPALERDMKAAATRAPVRA*
Ga0068857_1023175831	3300005577	Corn Rhizosphere	VGHAWQRLNLTIRRSLHEVSLAQLAGLAVEPPRVLALERDMKAAAARPLSRS*
Ga0070762_100706581	3300005602	Soil	SLNDVSLAQLAGLDAAPSRLPTLEREMKLAASRHPVRS*
Ga0066903_1055311502	3300005764	Tropical Forest Soil	LAMRRALYEVSLAQLAGLDATPARLPGLEREMKAAATRTQVRS*
Ga0066903_1072208271	3300005764	Tropical Forest Soil	LNLAIRRALYDVSLAQLAGLDAPPARLPSLERDMKAAASRTRVPS*
Ga0068863_1013593681	3300005841	Switchgrass Rhizosphere	HEVSLAQLAGIDQSTLRVLALERDMKAAAARAQSRST*
Ga0070766_113057901	3300005921	Soil	SLYDVSLAQLAGLEAAPARLPALEREMKAAASRTPVRA*
Ga0075018_107295001	3300006172	Watersheds	VWQRLNLAIRRALYDVSLAQLAGLDAAPARFMTLEREMKTVGTRPPSRT*
Ga0079220_115377902	3300006806	Agricultural Soil	EETCRVGRVWQRLNLAIRRSLYDVSLAQLAGIDPTQVTLPALERDMKAAATRTLVRS*
Ga0079219_115374791	3300006954	Agricultural Soil	NLTIRRSLHEVSLAQLAGLAAEPPRVLALERDMKAAAARPLSRS*
Ga0099793_105833571	3300007258	Vadose Zone Soil	LYEVSLAQLAGLEAAPARLPALEREMKAAAARAPVRS*
Ga0126380_102083212	3300010043	Tropical Forest Soil	RVRRVWQRLNLAIRRALYDVSLAQLAGLDAPPARLPALEREMKAAARTPLR*
Ga0123356_119921971	3300010049	Termite Gut	RLNLAIRRALYDVSLAQLAGLDAPPARLPTLERDMKAAATRTPFVSDRSHE*
Ga0134084_100922322	3300010322	Grasslands Soil	EVSLAQLAGLEAAPARLPALEREMKAAAARAPVRS*
Ga0074044_108084261	3300010343	Bog Forest Soil	CRVGRVWQRLNLAIRRALYDISLAQLAGLDAPPVRLPTLEREMKAAASRAPVRS*
Ga0126370_106932451	3300010358	Tropical Forest Soil	RVGRVWQRLNLAIRRALYDVSLAQLAGLDAPPARLATLEREMKAAGARTPLR*
Ga0126370_112552432	3300010358	Tropical Forest Soil	ALYDVSLAQLAGLDAPPARLPALEREMKAAARTPLR*
Ga0126379_111430442	3300010366	Tropical Forest Soil	NLAIRRALYEVSLAQLAGLDAPPARLATLEREMKAAGARTPVR*
Ga0134128_112260471	3300010373	Terrestrial Soil	RLNVTIRRSLHEVTLAQLAGLDVAQPRVLAHERDMKAAAARPVSRS*
Ga0126381_1014846722	3300010376	Tropical Forest Soil	RALYEVSLAQLAGLDAPPARLPALEREMKAAAARTPLRQERIQRNE*
Ga0126381_1030648791	3300010376	Tropical Forest Soil	GRVWQRLNLAIRRALYDVSLAQLAGLDSAPARLPSLERDMKAAASRTRASS*
Ga0126383_105768811	3300010398	Tropical Forest Soil	IRRALYEVSLAQLAGLDAPPARLATLEREMKAAGARTPVR*
Ga0134121_124480752	3300010401	Terrestrial Soil	FEKSCRVGHAWQRLNLTIRRSLHEVSLAQLAGIDQSSLRVLALERDMKAAAARAQSRST*
Ga0126369_131732902	3300012971	Tropical Forest Soil	SRVWQRLNLAMRRALYDVSLAQLAGLDAAPARLPGLEREMKAAATRTQVRS*
Ga0164304_103843052	3300012986	Soil	LNLAIRRSLNDVSLAQLAGLEAAPARLPTLEREMKAVGSRSPVRS*
Ga0157378_114498532	3300013297	Miscanthus Rhizosphere	QRLNLTIRRSLHEVSLAQLAGLAAEPPRVLALERDMKAAAARPLSRS*
Ga0157372_123171762	3300013307	Corn Rhizosphere	LYEISLAQLAGIDATQVRLPALEREMKITASRAPVR*
Ga0163163_127257562	3300014325	Switchgrass Rhizosphere	GHAWQRLNLTIRRSLHEVSLAQLAGIDQSTLRVLALERDMKAAAARAQSRST*
Ga0137420_11106652	3300015054	Vadose Zone Soil	SLYEVSLAQLAGLDAAPARLPALEREMKAAAARAPVRS*
Ga0132255_1024872822	3300015374	Arabidopsis Rhizosphere	LNDVSLAQLAGLEAAPARLPTLEREMKAVGSRTPVRS*
Ga0182041_110000002	3300016294	Soil	RRALYEVSLAQLAGLDAPPARLPALEREMKAAAARSPLR
Ga0182040_113343022	3300016387	Soil	VWQRLNLAIRRALYDVSLAQLAGLDAPPARLPALEREMKAAAARTRLR
Ga0182038_118444331	3300016445	Soil	ALYDVSLAQLAGLDAPPARLPALEREMKAAAARTRLR
Ga0187824_103021482	3300017927	Freshwater Sediment	DIAPTLAQLAGLEGAPARLPALEREMKAAASRAPAR
Ga0187825_101909021	3300017930	Freshwater Sediment	SRVWQRLNLAMRRALYDVSLAQLAGLDAAPARLPALEREMKAAAGRTQARS
Ga0187785_102592841	3300017947	Tropical Peatland	EIEETCRVGRVWQRLNLAIRRALYEVTLAQLAGLDAPPARLPTLEREMKSAALRTRLR
Ga0187779_111888801	3300017959	Tropical Peatland	LNLAIRRGLYDVSLAQLAGLDAAPSRLPALEREMKAAAGRSPARS
Ga0187805_104572901	3300018007	Freshwater Sediment	ALYEVSLAQLAGLDAAPARLPALEREMKSVASRAPLR
Ga0187769_101089603	3300018086	Tropical Peatland	RALYDVSLAQLAGLDAAPARLPALEREMKAAAGRTPARS
Ga0187794_16408052	3300019273	Peatland	RVWQRLNLAMRRALYDVSLAQLAGLDTTPARLPGLEREMKAAAGRTQVRS
Ga0206355_14315841	3300020076	Corn, Switchgrass And Miscanthus Rhizosphere	IEETCRVGRVWQRLNLAIRRSLYDVSLAQLAGIDTTHLALPALERDLKAAATRAPVRP
Ga0210406_108870351	3300021168	Soil	EIEETCRVGRVWQRLNLAIRRSLYDVSLAQLAGIDSSHVRLPALEREVKLATPRTPVRS
Ga0210405_102991211	3300021171	Soil	ETCRVSRVWQRLNLAIRRALYDVSLAQLAGLEGAPTRLPTLERDMKAAGRAPVRS
Ga0210405_110412921	3300021171	Soil	RLNLAIRRSLYDVSLAQLAGLEAAPARLPALEREMKAAASRTPVRA
Ga0210385_104868721	3300021402	Soil	CRVSRVWQRLNLAIRRALYDVSLAQLAGLEGAPTRLPTLERDMKAAAGRAPVRS
Ga0210394_102497841	3300021420	Soil	VSRVWQRLSLALRRGLYDVSLAQLAGLDAVPARLPALEREMKAAASRTQARS
Ga0242656_10243611	3300022525	Soil	SLYEVSLAQLAGLDAAPARLPALEREMKAAAARAPVRS
Ga0247768_10556692	3300022910	Plant Litter	EVSLAQLAGIDHSQPRVLALERDMKAAAARAQSRSS
Ga0247777_10327193	3300022917	Plant Litter	GHAWQRLNVTIRRSLREVSLAQLAGFDSNQPRVLALERDMKAAAARAQSRS
Ga0247762_10865152	3300023169	Plant Litter	GYEKSCRVGHAWQRLNLTIRRSLHEVSLAQLAGIDASQPRVLALERDMKAAAARAQSRS
Ga0207685_107016392	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	GHGQCEIEETCRVGRVWQRLNLAIRRALYDVTLAQLAGLDAPPARLPTLEREMKAAALRTRLR
Ga0207699_101342381	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	RVWQRLNLAIRRSLNDVSLAQLAGLEAAPARLPTLEREMKAVGSRTPVRS
Ga0207684_113835641	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	RLNLAIRRSLHDVSLAQLAGLDAAPARLPALERDMKAAAARPPVRS
Ga0207693_107819852	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	LNLAILRALHDVSLAQLAGLDAPPARLATLEREMKAAAARTPLR
Ga0207700_101158893	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	TVSLAQLAGLEAAPARLPTLEREMKAVGSRTPVRS
Ga0207644_100787141	3300025931	Switchgrass Rhizosphere	AIRRSLNDVSLAQLAGLEAAPARLPTLEREMKAVGSRTPVRS
Ga0207665_105188992	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	TCRVGRVWQRLNLAIRRALYDVTLAQLAGLDAPPARLPTLEREMKAAALRTPLR
Ga0207689_111475792	3300025942	Miscanthus Rhizosphere	LHEVSLAQLAGIDQSTLRVLALERDMKAAAARAQSRST
Ga0207640_120050882	3300025981	Corn Rhizosphere	SLHEVSLAQLAGLDPTQPRVLAHERDMKAAAARPVSRS
Ga0209473_13305581	3300026330	Soil	NLAFRRSLYEVSLAQLAGLEAAPARLPALEREMKAAARS
Ga0209158_11750542	3300026333	Soil	RALYDVSLAQLAGLDAAPARLPALEREMKAAASRAPSRS
Ga0209156_103814612	3300026547	Soil	VWQRLNLAIRRALYDVSLAQLAGLDAAPARLPALEREMKAAAARAPSRS
Ga0208241_10149842	3300027297	Forest Soil	LAIRRALYDVTLAQLAGIDAAPARLPALEREMKAAAGRVPAR
Ga0208984_10257991	3300027546	Forest Soil	LNLAFRRSLYEVSLAQLAGLDAPPARLPALEREMKVAAARAPVRS
Ga0209811_100110632	3300027821	Surface Soil	VWQRLNLAIRRSLNDVSLAQLAGLEAAPARLPTLEREMKAVGSRTPVRS
Ga0209167_102497501	3300027867	Surface Soil	IRRSLHEVSLAQLAGLDVAPVRWPTLEREMKAAAVRPPVRS
Ga0268266_105766791	3300028379	Switchgrass Rhizosphere	LNLAIRRSLNDVSLAQLAGLEAAPARLPTLEREMKAVGSRTPVRS
Ga0268266_118387532	3300028379	Switchgrass Rhizosphere	LTIRRSLHEVSLAQLAGLAAEPPRVLALERDMKAAAARPLSRS
Ga0268265_115722581	3300028380	Switchgrass Rhizosphere	CRVGHAWQRLNLTIRRSLHEVSLAQLAGLAAEPPRVLALERDMKAAASRPLSRS
Ga0302184_102711302	3300030490	Palsa	RRALYDVSLAQLAGLDAVPARLPTLEREMKAATSRPPART
Ga0311356_114592982	3300030617	Palsa	CRVGRVWQRLNLAIRRALYDVSLAQLAGLDAPPARLPTLEREMKSAASRTPARS
Ga0170824_1017417082	3300031231	Forest Soil	DVSLAQLAGLEAAPARLPALEREMKAAASRTAVRA
Ga0170824_1058349461	3300031231	Forest Soil	GRVWQRLNLAIRKSLYDITLAQLAGIDTTLIDSPQAPLPALEREMKAVASTRAPVR
Ga0318573_100995232	3300031564	Soil	GRVWQRLNLAIRRALYDVSLAQLAGLDAPPARLPALEREMKAAATRTRLR
Ga0310915_109253401	3300031573	Soil	GQCDIEESCRVGRVWQRLNLAIRRALYEVTLAQLAGLDAPPARLPALEREMKAAATRTPL
Ga0307483_10113851	3300031590	Hardwood Forest Soil	GSCRVSRVWQRLNLAIRRALYDVSLAQLAGLDAAPARLPALEREMKAAASRAPARS
Ga0318555_107189661	3300031640	Soil	VGRVWQRLNLAIRRALYEVTLAQLAGLDAPPARLPALEREMKAAATRTPLR
Ga0318561_105474001	3300031679	Soil	YEVSLAQLAGLDAPPARLPALEREMKAAAARNPLR
Ga0318574_103779281	3300031680	Soil	NLAIRRALYDVSLAQLAGLDAPPARLPALEREMKAAAARTRLR
Ga0318496_100359354	3300031713	Soil	VWQRLNLAIRRALYEVTLAQLAGLDAPPARLPALEREMKAAATRTPLR
Ga0307474_100992383	3300031718	Hardwood Forest Soil	LNLAIRRALYDVSLAQLAGLDAPPARLPTLERDMKAAARTPVRS
Ga0318493_101076852	3300031723	Soil	AMRRALYEVSLAQLAGLDAPPARLPALEREMKAAAARSPLR
Ga0318502_100984841	3300031747	Soil	ALYEVSLAQLAGLDAPPARLPALEREMKAAAARNPLR
Ga0318494_105727121	3300031751	Soil	RALYEVSLAQLAGLDAPPARLPALEREMKAAAARSPLR
Ga0318537_100477302	3300031763	Soil	ALYDVSLAQLAGLDAPPARLTALEREMKAAATRTPLR
Ga0318526_103728842	3300031769	Soil	QRLNLAIRRALYDVSLAQLAGLDAPPARLTALEREMKAAATRTPLR
Ga0318546_107312992	3300031771	Soil	LNLAIRRALYDVSLAQLAGLDAAPARLPSLERDMKAAAARTRLR
Ga0318566_100143754	3300031779	Soil	LYEVSLAQLAGLDAPPARLPALEREMKAAAARSPLR
Ga0318547_106635091	3300031781	Soil	ALYDVSLAQLAGLDTAPARLPSLERDMKAAASRTRVSS
Ga0318523_100894722	3300031798	Soil	YEVSLAQLAGLDAPPARLPALEREMKAAGARSPLR
Ga0318497_108225281	3300031805	Soil	RVGRVWQRLNLAIRRALYDVSLAQLAGLDAAPARLPSLEREMKAAAVRTPLR
Ga0318568_105887862	3300031819	Soil	IRRALYDVSLAQLAGLDAPPARLATLEREMKAAAARTPVR
Ga0310917_105433162	3300031833	Soil	NLAIRRALYDVSLAQLAGLDAAPARLPSLERDMKAAAARTRLR
Ga0318512_100925823	3300031846	Soil	LYDVSLAQLAGLDAPPARLPALEREMKAAAARTRLR
Ga0306925_100177871	3300031890	Soil	LNLAIRRALYDVSLAQLAGLDAPPARLTALEREMKAAATRTPLR
Ga0306925_105438461	3300031890	Soil	ALYDVSLAQLAGLDAAPARLPSLEREMKAAAVRTPLR
Ga0306923_113422731	3300031910	Soil	RALYDVSLAQLAGLDAPPARLPALEREMKAAAARTRLR
Ga0310912_100908361	3300031941	Soil	LNLAIRRALYDVSLAQLAGLDAPPARLPALEREMKAAAARTRLR
Ga0310912_102755972	3300031941	Soil	RALYEVSLAQLAGLDAPPARLPALEREMKAAAARNPLR
Ga0307479_103419022	3300031962	Hardwood Forest Soil	RRALYDVSLAQLAGIDAAPARLPALEREMKAAAGRTQARS
Ga0318531_101855482	3300031981	Soil	YEVSLAQLAGLDAPPARLPALEREMKAAAARSPLR
Ga0318569_100652181	3300032010	Soil	YDVSLAQLAGLDAPPARLPALEREMKAAATRTRLR
Ga0310911_101922272	3300032035	Soil	ALYEVSLAQLAGLDAPPARLPALEREMKAAAARTPVR
Ga0318532_100357862	3300032051	Soil	IRRALYDVSLAQLAGLDAPPARLTALEREMKAAATRTPLR
Ga0318532_101592952	3300032051	Soil	VGRVWQRLNLAIRRALYDVSLAQLAGLDAAPARLPSLERDMKAAAARTRLR
Ga0318506_100529271	3300032052	Soil	CDIEESCRVGRVWQRLNLAIRRALYEVTLAQLAGLDAPPARLPALEREMKAAATRTPLR
Ga0318504_104631542	3300032063	Soil	IRRALYDVSLAQLAGLDAAPARLPSLEREMKAAAVRTPLR
Ga0318510_101745882	3300032064	Soil	WQRLNLAIRRALYDVSLAQLAGLDAPPARLPALEREMKAAATRTRLR
Ga0318514_100217341	3300032066	Soil	RALYEVTLAQLAGLDAPPARLPALEREMKAAATRTPLR
Ga0318514_105471031	3300032066	Soil	LYDVSLAQLAGLDAPPARLATLEREMKAAAARTPVR
Ga0306924_106600242	3300032076	Soil	RLNLAIRRALYDVSLAQLAGLDAAPARLPSLEREMKAAAVRTPLR
Ga0318518_104626192	3300032090	Soil	YEVTLAQLAGLDAPPARLPALEREMKAAATRTPLR
Ga0307415_1024660122	3300032126	Rhizosphere	LTIRRSLHEVSLAQLAGLDASQPRVLALERDMKAAAARAQSRS
Ga0307471_1005613332	3300032180	Hardwood Forest Soil	GRVWQRLNLAILRALHDVSLAQLAGLDAPPARLATLEREMKAAAARTPLR
Ga0335074_105363821	3300032895	Soil	LNLAIRRSLYDVSLAQLAGIDTTQVTLPALERDMKAAAARTPVRS
Ga0335072_101388941	3300032898	Soil	HGNCEIEESCRVSRVWQRLNLAIRRALYDVTLAQLAGLEGAPARLPALEREMKAAASRAPAR
Ga0335076_104102651	3300032955	Soil	GNCEIEESCRVSRVWQRLNLAIRRALYDVTLAQLAGLEGAPARLPALEREMKAAASRAPA
Ga0335073_101780912	3300033134	Soil	HDVSLAQLAGIDPTQVTLPALERDMKAAATRTPIRS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F061226

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences