Metagenome / Metatranscriptome Family F061187

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F061187
Family Type	Metagenome / Metatranscriptome
Number of Sequences	132
Average Sequence Length	78 residues
Representative Sequence	MDSAPEHTRFVSRGRLNGVLRQNPVGGGPAEGAATQPGREQSGLDELDTQAFEALYYRARLILGEPLPRPARFQLRGH
Number of Associated Samples	119
Number of Associated Scaffolds	132

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	90.91 %
% of genes near scaffold ends (potentially truncated)	11.36 %
% of genes from short scaffolds (< 2000 bps)	50.76 %
Associated GOLD sequencing projects	97
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.37

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (84.848 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (15.152 % of family members)
Environment Ontology (ENVO)	Unclassified (50.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (56.818 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 16.98% β-sheet: 0.00% Coil/Unstructured: 83.02%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.37
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.37
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 132 Family Scaffolds
PF12857	TOBE_3	17.42
PF09423	PhoD	8.33
PF00528	BPD_transp_1	3.79
PF12849	PBP_like_2	3.79
PF03459	TOBE	2.27
PF10387	DUF2442	2.27
PF00156	Pribosyltran	1.52
PF07992	Pyr_redox_2	1.52
PF00005	ABC_tran	1.52
PF01850	PIN	1.52
PF06305	LapA_dom	1.52
PF01544	CorA	1.52
PF03773	ArsP_1	1.52
PF00702	Hydrolase	1.52
PF01925	TauE	0.76
PF00582	Usp	0.76
PF13732	DUF4162	0.76
PF01979	Amidohydro_1	0.76
PF02737	3HCDH_N	0.76
PF13578	Methyltransf_24	0.76
PF13493	DUF4118	0.76
PF04860	Phage_portal	0.76
PF06750	DiS_P_DiS	0.76
PF00588	SpoU_methylase	0.76
PF00561	Abhydrolase_1	0.76
PF01048	PNP_UDP_1	0.76
PF00664	ABC_membrane	0.76
PF01638	HxlR	0.76
PF01654	Cyt_bd_oxida_I	0.76
PF00210	Ferritin	0.76
PF00753	Lactamase_B	0.76
PF12840	HTH_20	0.76
PF00411	Ribosomal_S11	0.76
PF13531	SBP_bac_11	0.76
PF04014	MazE_antitoxin	0.76
PF03061	4HBT	0.76
PF04185	Phosphoesterase	0.76
PF03793	PASTA	0.76
PF13473	Cupredoxin_1	0.76
PF08245	Mur_ligase_M	0.76

COG ID	Name	Functional Category	% Frequency in 132 Family Scaffolds
COG1989	Prepilin signal peptidase PulO (type II secretory pathway) or related peptidase	Cell motility [N]	2.27
COG0598	Mg2+ and Co2+ transporter CorA	Inorganic ion transport and metabolism [P]	1.52
COG0701	Uncharacterized membrane protein YraQ, UPF0718 family	Function unknown [S]	1.52
COG3771	Lipopolysaccharide assembly protein YciS/LapA, DUF1049 family	Cell wall/membrane/envelope biogenesis [M]	1.52
COG0100	Ribosomal protein S11	Translation, ribosomal structure and biogenesis [J]	0.76
COG0219	tRNA(Leu) C34 or U34 (ribose-2'-O)-methylase TrmL, contains SPOUT domain	Translation, ribosomal structure and biogenesis [J]	0.76
COG0240	Glycerol-3-phosphate dehydrogenase	Energy production and conversion [C]	0.76
COG0287	Prephenate dehydrogenase	Amino acid transport and metabolism [E]	0.76
COG0565	tRNA C32,U32 (ribose-2'-O)-methylase TrmJ or a related methyltransferase	Translation, ribosomal structure and biogenesis [J]	0.76
COG0566	tRNA G18 (ribose-2'-O)-methylase SpoU	Translation, ribosomal structure and biogenesis [J]	0.76
COG0677	UDP-N-acetyl-D-mannosaminuronate dehydrogenase	Cell wall/membrane/envelope biogenesis [M]	0.76
COG0730	Sulfite exporter TauE/SafE/YfcA and related permeases, UPF0721 family	Inorganic ion transport and metabolism [P]	0.76
COG0775	Nucleoside phosphorylase/nucleosidase, includes 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase MtnN and futalosine hydrolase MqnB	Nucleotide transport and metabolism [F]	0.76
COG0813	Purine-nucleoside phosphorylase	Nucleotide transport and metabolism [F]	0.76
COG1004	UDP-glucose 6-dehydrogenase	Cell wall/membrane/envelope biogenesis [M]	0.76
COG1250	3-hydroxyacyl-CoA dehydrogenase	Lipid transport and metabolism [I]	0.76
COG1271	Cytochrome bd-type quinol oxidase, subunit 1	Energy production and conversion [C]	0.76
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	0.76
COG1748	Saccharopine dehydrogenase, NADP-dependent	Amino acid transport and metabolism [E]	0.76
COG2084	3-hydroxyisobutyrate dehydrogenase or related beta-hydroxyacid dehydrogenase	Lipid transport and metabolism [I]	0.76
COG2820	Uridine phosphorylase	Nucleotide transport and metabolism [F]	0.76
COG3511	Phospholipase C	Cell wall/membrane/envelope biogenesis [M]	0.76

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	84.85 %
Unclassified	root	N/A	15.15 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	84.85 %
Unclassified	root	N/A	15.15 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	84.85 %
Unclassified	root	N/A	15.15 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	75.76 %
Unclassified	root	N/A	15.15 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	75.76 %
Unclassified	root	N/A	15.15 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	43.94 %
Unclassified	root	N/A	15.15 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4.55 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	39.39 %
Unclassified	root	N/A	15.15 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	3.79 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	15.15 %
unclassified Solirubrobacterales	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales	12.88 %
Conexibacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae	4.55 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3.79 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	15.15 %
Solirubrobacterales bacterium 70-9	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium 70-9	10.61 %
Conexibacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter	4.55 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3.79 %
Solirubrobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	2.27 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	15.15 %
Solirubrobacterales bacterium 70-9	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium 70-9	10.61 %
Conexibacter woesei	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	4.55 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3.79 %
Solirubrobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	2.27 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.76 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000317\|WSSedL2TaDRAFT_1020516	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	687	Open in IMG/M
3300001213\|JGIcombinedJ13530_109674636	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1732	Open in IMG/M
3300002568\|C688J35102_120353788	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1009	Open in IMG/M
3300002568\|C688J35102_120948522	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2837	Open in IMG/M
3300004016\|Ga0058689_10001330	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	5022	Open in IMG/M
3300004081\|Ga0063454_100477149	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	867	Open in IMG/M
3300004803\|Ga0058862_11183711	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	523	Open in IMG/M
3300005161\|Ga0066807_1023638	Not Available	639	Open in IMG/M
3300005163\|Ga0066823_10035338	Not Available	848	Open in IMG/M
3300005168\|Ga0066809_10012256	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1635	Open in IMG/M
3300005329\|Ga0070683_100040550	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	4282	Open in IMG/M
3300005333\|Ga0070677_10000001	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	118426	Open in IMG/M
3300005337\|Ga0070682_100000028	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	185177	Open in IMG/M
3300005338\|Ga0068868_100000261	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	35848	Open in IMG/M
3300005353\|Ga0070669_100715324	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium 70-9	846	Open in IMG/M
3300005356\|Ga0070674_100000022	All Organisms → cellular organisms → Bacteria	85839	Open in IMG/M
3300005364\|Ga0070673_100002074	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	12077	Open in IMG/M
3300005367\|Ga0070667_100265173	Not Available	1539	Open in IMG/M
3300005406\|Ga0070703_10056927	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium 70-9	1267	Open in IMG/M
3300005437\|Ga0070710_10649547	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	739	Open in IMG/M
3300005438\|Ga0070701_10654059	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium 70-9	702	Open in IMG/M
3300005439\|Ga0070711_100014451	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	4975	Open in IMG/M
3300005441\|Ga0070700_100007408	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	5923	Open in IMG/M
3300005455\|Ga0070663_100099969	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2163	Open in IMG/M
3300005456\|Ga0070678_100590933	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	990	Open in IMG/M
3300005457\|Ga0070662_100000007	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	168761	Open in IMG/M
3300005459\|Ga0068867_100000294	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	32742	Open in IMG/M
3300005539\|Ga0068853_100002403	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	13996	Open in IMG/M
3300005548\|Ga0070665_100000068	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	204531	Open in IMG/M
3300005587\|Ga0066654_10040052	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2013	Open in IMG/M
3300005614\|Ga0068856_100005720	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	12246	Open in IMG/M
3300005614\|Ga0068856_101200326	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	775	Open in IMG/M
3300005615\|Ga0070702_100689241	Not Available	777	Open in IMG/M
3300005616\|Ga0068852_100168368	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2052	Open in IMG/M
3300005841\|Ga0068863_100000004	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	272478	Open in IMG/M
3300005873\|Ga0075287_1041989	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	615	Open in IMG/M
3300005874\|Ga0075288_1007845	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium 70-9	1385	Open in IMG/M
3300005884\|Ga0075291_1001519	Not Available	2528	Open in IMG/M
3300005884\|Ga0075291_1028380	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium 70-9	697	Open in IMG/M
3300006046\|Ga0066652_100282281	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1467	Open in IMG/M
3300006163\|Ga0070715_10000001	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	693690	Open in IMG/M
3300006173\|Ga0070716_101182224	Not Available	613	Open in IMG/M
3300006572\|Ga0074051_11040517	Not Available	633	Open in IMG/M
3300006576\|Ga0074047_11695594	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium 70-9	738	Open in IMG/M
3300006846\|Ga0075430_100404124	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1127	Open in IMG/M
3300006954\|Ga0079219_10166123	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium 70-9	1202	Open in IMG/M
3300007076\|Ga0075435_101184411	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	668	Open in IMG/M
3300009098\|Ga0105245_10023182	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	5448	Open in IMG/M
3300009545\|Ga0105237_12597049	Not Available	517	Open in IMG/M
3300009551\|Ga0105238_10000023	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	196844	Open in IMG/M
3300010333\|Ga0134080_10457053	Not Available	600	Open in IMG/M
3300010362\|Ga0126377_10155942	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2150	Open in IMG/M
3300010362\|Ga0126377_10171123	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium 70-9	2058	Open in IMG/M
3300010375\|Ga0105239_10260749	All Organisms → cellular organisms → Bacteria	1948	Open in IMG/M
3300010400\|Ga0134122_10006403	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	8739	Open in IMG/M
3300010401\|Ga0134121_10000104	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	93944	Open in IMG/M
3300010403\|Ga0134123_10477623	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1167	Open in IMG/M
3300012070\|Ga0153963_1005146	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium 70-9	2687	Open in IMG/M
3300012515\|Ga0157338_1052104	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	590	Open in IMG/M
3300012903\|Ga0157289_10001067	All Organisms → cellular organisms → Bacteria	3584	Open in IMG/M
3300012909\|Ga0157290_10000467	All Organisms → cellular organisms → Bacteria	5190	Open in IMG/M
3300012911\|Ga0157301_10095887	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	863	Open in IMG/M
3300012914\|Ga0157297_10109389	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	843	Open in IMG/M
3300012916\|Ga0157310_10002525	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	3892	Open in IMG/M
3300012955\|Ga0164298_10000892	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	8678	Open in IMG/M
3300012986\|Ga0164304_10944058	Not Available	678	Open in IMG/M
3300013297\|Ga0157378_11673772	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	683	Open in IMG/M
3300013297\|Ga0157378_13179074	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	510	Open in IMG/M
3300013308\|Ga0157375_11798451	All Organisms → cellular organisms → Bacteria	726	Open in IMG/M
3300014325\|Ga0163163_10462317	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1329	Open in IMG/M
3300014326\|Ga0157380_10000487	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	24132	Open in IMG/M
3300014502\|Ga0182021_13497311	Not Available	522	Open in IMG/M
3300014968\|Ga0157379_10076731	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2992	Open in IMG/M
3300014968\|Ga0157379_10160892	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2026	Open in IMG/M
3300015068\|Ga0167645_100051	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	19186	Open in IMG/M
3300015371\|Ga0132258_10791107	All Organisms → cellular organisms → Bacteria	2391	Open in IMG/M
3300017792\|Ga0163161_10000013	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	258747	Open in IMG/M
3300017792\|Ga0163161_10191187	Not Available	1574	Open in IMG/M
3300018422\|Ga0190265_10095240	All Organisms → cellular organisms → Bacteria	2772	Open in IMG/M
3300018429\|Ga0190272_10000511	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	20303	Open in IMG/M
3300018429\|Ga0190272_10026552	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3081	Open in IMG/M
3300018431\|Ga0066655_10133987	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1445	Open in IMG/M
3300018476\|Ga0190274_10163900	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1899	Open in IMG/M
3300019881\|Ga0193707_1043695	All Organisms → cellular organisms → Bacteria	1442	Open in IMG/M
3300019884\|Ga0193741_1068332	Not Available	915	Open in IMG/M
3300020021\|Ga0193726_1284443	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	651	Open in IMG/M
3300021403\|Ga0210397_10306677	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	1167	Open in IMG/M
3300024187\|Ga0247672_1076169	Not Available	574	Open in IMG/M
3300025893\|Ga0207682_10000034	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	56869	Open in IMG/M
3300025899\|Ga0207642_10000006	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	230268	Open in IMG/M
3300025905\|Ga0207685_10000011	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	213430	Open in IMG/M
3300025912\|Ga0207707_10021113	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	5691	Open in IMG/M
3300025916\|Ga0207663_10001227	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	11833	Open in IMG/M
3300025923\|Ga0207681_10313993	Not Available	1244	Open in IMG/M
3300025924\|Ga0207694_10000004	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	967075	Open in IMG/M
3300025927\|Ga0207687_10000055	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	88382	Open in IMG/M
3300025933\|Ga0207706_10000018	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	168729	Open in IMG/M
3300025935\|Ga0207709_10938033	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	705	Open in IMG/M
3300025942\|Ga0207689_11629169	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	536	Open in IMG/M
3300025944\|Ga0207661_10002003	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	14030	Open in IMG/M
3300025960\|Ga0207651_10042334	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3030	Open in IMG/M
3300025961\|Ga0207712_10000007	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	539589	Open in IMG/M
3300025986\|Ga0207658_11601749	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	595	Open in IMG/M
3300025996\|Ga0208777_1004055	Not Available	1269	Open in IMG/M
3300025996\|Ga0208777_1017296	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	615	Open in IMG/M
3300026023\|Ga0207677_10000046	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	105382	Open in IMG/M
3300026035\|Ga0207703_10000310	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	52770	Open in IMG/M
3300026041\|Ga0207639_10004273	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	9633	Open in IMG/M
3300026075\|Ga0207708_10049057	All Organisms → cellular organisms → Bacteria	3214	Open in IMG/M
3300026078\|Ga0207702_10002069	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	19408	Open in IMG/M
3300026078\|Ga0207702_10856259	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	900	Open in IMG/M
3300026078\|Ga0207702_12210070	Not Available	539	Open in IMG/M
3300026078\|Ga0207702_12232668	Not Available	536	Open in IMG/M
3300026088\|Ga0207641_10000170	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	91128	Open in IMG/M
3300026089\|Ga0207648_10004975	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	13515	Open in IMG/M
3300026121\|Ga0207683_10556997	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1060	Open in IMG/M
3300026142\|Ga0207698_10067244	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	2825	Open in IMG/M
3300027496\|Ga0208987_1001926	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium 70-9	3225	Open in IMG/M
3300027524\|Ga0208998_1006045	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1846	Open in IMG/M
3300027560\|Ga0207981_1033079	All Organisms → cellular organisms → Bacteria	940	Open in IMG/M
3300027560\|Ga0207981_1098533	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium 70-9	539	Open in IMG/M
3300027750\|Ga0209461_10000054	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	95387	Open in IMG/M
3300028714\|Ga0307309_10102556	All Organisms → cellular organisms → Bacteria	684	Open in IMG/M
3300028790\|Ga0307283_10252985	Not Available	518	Open in IMG/M
3300028802\|Ga0307503_10000027	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	137045	Open in IMG/M
3300028824\|Ga0307310_10250238	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium 70-9	851	Open in IMG/M
3300031199\|Ga0307495_10048312	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	861	Open in IMG/M
3300031200\|Ga0307496_10019312	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium 70-9	970	Open in IMG/M
3300031996\|Ga0308176_11972795	Not Available	623	Open in IMG/M
3300032003\|Ga0310897_10179926	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	909	Open in IMG/M
3300032770\|Ga0335085_10094410	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	3886	Open in IMG/M
3300034268\|Ga0372943_0052366	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium 70-9	2285	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	55.30%
Host-Associated	Host-Associated	44.70%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	53.79%
Plants	Host-Associated → Plants	43.18%
Aquatic	Environmental → Aquatic	1.52%
Human	Host-Associated → Human	0.76%
Fungi	Host-Associated → Fungi	0.76%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	53.79%
Rhizosphere	Host-Associated → Plants → Rhizosphere	21.97%
Rhizoplane	Host-Associated → Plants → Rhizoplane	18.94%
Marine	Environmental → Aquatic → Marine	1.52%
Phyllosphere	Host-Associated → Plants → Phyllosphere	1.52%
Digestive System	Host-Associated → Human → Digestive System	0.76%
Roots	Host-Associated → Plants → Roots	0.76%
Mycelium	Host-Associated → Fungi → Mycelium	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	32.58%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	16.67%
Loam	Environmental → Terrestrial → Soil → Loam	15.15%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	12.12%
Soil	Host-Associated → Plants → Rhizosphere → Soil	9.85%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	6.06%
Wetlands	Environmental → Aquatic → Marine → Wetlands	1.52%
Soil	Host-Associated → Plants → Rhizoplane → Soil	1.52%
Phylloplane/Leaf Surface	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface	1.52%
Large Intestine	Host-Associated → Human → Digestive System → Large Intestine	0.76%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.76%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.76%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	25.76%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	16.67%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	12.12%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	11.36%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	9.85%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	5.30%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.27%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	2.27%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	2.27%
Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment	1.52%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.52%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.52%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	1.52%
Unclassified	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface → Unclassified	1.52%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.76%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.76%
Fecal	Host-Associated → Human → Digestive System → Large Intestine → Fecal	0.76%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.76%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.76%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified	0.76%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	15.15%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	8.33%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	7.58%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.30%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	5.30%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	4.55%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	4.55%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	3.03%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	3.03%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.27%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.27%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	2.27%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.27%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.27%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.27%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.27%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	2.27%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.27%
Wetland	Environmental → Aquatic → Marine → Wetlands → Sediment → Wetland	1.52%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.52%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.52%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.52%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.52%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.52%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	1.52%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.52%
Agave	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface → Unclassified → Agave	1.52%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.76%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.76%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.76%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.76%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.76%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	0.76%
Host-Associated	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated	0.76%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.76%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.76%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.76%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.76%
Attine Ant Fungus Gardens	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens	0.76%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000317	Wetland microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Feb2011 Site L2 Tule	Environmental	Open in IMG/M
3300001213	Combined assembly of wetland microbial communities from Twitchell Island in the Sacramento Delta (Jan 2013 JGI Velvet Assembly)	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300004016	Agave microbial communities from Guanajuato, Mexico - As.Ma.rz	Host-Associated	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004803	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-2 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300005161	Soil and rhizosphere microbial communities from Laval, Canada - mgLPA	Environmental	Open in IMG/M
3300005163	Soil and rhizosphere microbial communities from Laval, Canada - mgHMB	Environmental	Open in IMG/M
3300005168	Soil and rhizosphere microbial communities from Laval, Canada - mgLPC	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005333	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG	Host-Associated	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005406	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005587	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005873	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_0N_301	Environmental	Open in IMG/M
3300005874	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_0N_404	Environmental	Open in IMG/M
3300005884	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_80N_302	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006572	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHPB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006576	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300012070	Attine ant fungus gardens microbial communities from Florida, USA - TSFL047 MetaG	Host-Associated	Open in IMG/M
3300012515	Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.7.yng.070610	Host-Associated	Open in IMG/M
3300012903	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S134-311R-1	Environmental	Open in IMG/M
3300012909	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S149-409B-1	Environmental	Open in IMG/M
3300012911	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S088-202R-2	Environmental	Open in IMG/M
3300012914	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S028-104C-2	Environmental	Open in IMG/M
3300012916	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S213-509R-2	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014502	Permafrost microbial communities from Stordalen Mire, Sweden - 612E3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015068	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G8C, Adjacent to main proglacial river, end of transect (Watson river))	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018429	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300019881	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3c2	Environmental	Open in IMG/M
3300019884	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2s2	Environmental	Open in IMG/M
3300020021	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c1	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300024187	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK13	Environmental	Open in IMG/M
3300025893	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025924	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025996	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_0N_301 (SPAdes)	Environmental	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027496	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300027524	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM2_M2 (SPAdes)	Environmental	Open in IMG/M
3300027560	Soil and rhizosphere microbial communities from Laval, Canada - mgLPC (SPAdes)	Environmental	Open in IMG/M
3300027750	Agave microbial communities from Guanajuato, Mexico - As.Ma.rz (SPAdes)	Host-Associated	Open in IMG/M
3300028714	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_196	Environmental	Open in IMG/M
3300028790	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_122	Environmental	Open in IMG/M
3300028802	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 17_S	Environmental	Open in IMG/M
3300028824	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197	Environmental	Open in IMG/M
3300031199	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 7_S	Environmental	Open in IMG/M
3300031200	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 9_S	Environmental	Open in IMG/M
3300031996	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2	Environmental	Open in IMG/M
3300032003	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D1	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300034268	Forest soil microbial communities from Eldorado National Forest, California, USA - SNFC_MG_FRD_1.2	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
WSSedL2TaDRAFT_10205161	3300000317	Wetland	TTFVSRGRLNGVLRQRPSGGGPAEGSATQPGREQNSVDELDTQTFEALYYRARLILGEPLPRPGRFQNRGH*
JGIcombinedJ13530_1096746362	3300001213	Wetland	VSDEPSHTTFVSRGRLNGVLRQRPSGGGPAEGSATQPGREQNSVDELDTQTFEALYYRARLILGEPLPRPGRFQNRGH*
C688J35102_1203537882	3300002568	Soil	MVNKNEKGDAVNVPPPKTTFVSRGRLNGVLRQGPSGGGPAEGGGTQPGREQSSVDELDTQAFEALYYRARLILGEPLPRPGRFQLRGH*
C688J35102_1209485221	3300002568	Soil	VNGPPSKTKFVSRGRLNGVLRQSPPGGGLAEGVGTQPGRERSSVDELDTQTFEALYYRARLILGEPLPRPGRFQLHGH*
Ga0058689_100013303	3300004016	Agave	MSAPPPTTRFVSRGRLNGVLRQPTGGDPATSGNTQPAREQIGAGEVDTQTYEAVYYRARLVLGDSLPRPPRFQLRGH*
Ga0063454_1004771492	3300004081	Soil	LSGPPPHTTFVSRGRLNGVLRQGPSGGGPVEASATQPGREQSGDELDTQAFEALYYRARLILGEPLPRPGRFQLRGH*
Ga0058862_111837111	3300004803	Host-Associated	MDSAPEHTRFVSRGRLNGVLRQHHVGGGGPAEGAGTQPGREHGGVDELDTQAFEVLYYRARLILGEPLPRPERFQLRGR*
Ga0066807_10236382	3300005161	Soil	VSNVPKHTRIVSRGRLQGVLRQAPSGGGPGETSTQPGRERSAVDDLDTQAFEALYYRARLILGEP
Ga0066823_100353381	3300005163	Soil	MDSAPEHTRFVSRGRLNGVLRQHPGGGGPADVPATQPGREQHGVDDLDTQAFEALYYRARLILGEPLPRPARFQLRGH*
Ga0066809_100122562	3300005168	Soil	MSDAPKQTRVISRGRISGVLRQHPGGGGRGDAATQPARERSSVDDLDTQAFEALYYRARLILGEPLPRPGRFGLRGH*
Ga0070683_1000405504	3300005329	Corn Rhizosphere	VSGAPEHTKFISRGRLSGVYRQPVGGGPVEAAATQPGREQSGVDDLDTQAFEALYYRARLILGEPLPRPARFQRGR*
Ga0070677_1000000187	3300005333	Miscanthus Rhizosphere	VSGAPEHTKFVSRGRLSGVYRQPVGGGPTEGIATQPGREQSGTDELDTQAFEALYYRARLILGEPLPRPARFQLRGH*
Ga0070682_10000002880	3300005337	Corn Rhizosphere	MDNAPEQTKFVSRGRLNGVLRQHPGGGGPADLPATQPGREQHGVDDLDTQAFEALYYRARLILGEPLPRPARFQLRGH*
Ga0068868_1000002617	3300005338	Miscanthus Rhizosphere	VSDAPKHTRIVSRGRLQGVLRQAPSGGGPGETSTQPGRERSAVDDLDTQAFEALYYRARLILGEPLPRPGRFGQRDH*
Ga0070669_1007153242	3300005353	Switchgrass Rhizosphere	VSKAPQHTRFVSRGRLNGVVRERAAGNGPAEGAGTQPGRERSALEDLDTQAFEALYYRARLILGEPLPRPARFRRGAR*
Ga0070674_10000002214	3300005356	Miscanthus Rhizosphere	MSDVPQHTQFVSRGRLNGVVREHAAGGPAEGTGTQPGRERNALEDLDTQAFEALYYRARLILGEPLPRPARFQRGAR*
Ga0070673_1000020744	3300005364	Switchgrass Rhizosphere	VSEAPQHTQFVSRGRLNGVVREHATGSGPAEGAGTQPGRERNALEDLDTQAFEALYYRARLILGEPLPRPPRFQLRGH*
Ga0070667_1002651732	3300005367	Switchgrass Rhizosphere	MVNKNEKGDAVNGPPTQTTFVSRGRLNGVLRQGPQGGGPAEGSSTQPGREQSSVDELDTRAFEALYYRARLILGEPLPRPGRFQLRGH*
Ga0070703_100569271	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	MSDAPPHTQFVSRGRLSGVVRDSAAGSGLSEGAPTQPGRERSAVEEMDTQTFEALYYRARLILGEPLPRPLRFQRRGR*
Ga0070710_106495471	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	VSGVPEHTKFISRGRLSGVYRQPVGGGPAEAAATQPGREQSGGDELDTQAFEALYYRARLILGEPLPRPARFQLRGH*
Ga0070701_106540591	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	VSSDPEHTKFVSRGRLNGVLRRPVGGGPTEGHATQPGREQGTAEELDTQAFEALYYRARLILGEPL
Ga0070711_1000144515	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	VDAPDTTTFVSRGRLNGTIRQPAGGGPGDGHNTQPGREKAGTDDLDTQAFEALYYRARLILGEPLPRPGRFQLRGH*
Ga0070700_1000074083	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	VSQAPQHTRFVSRGRLNGVLRQTAGGGPTEGGTTQPGREGSVDELDTQTFEALYYRARLILGDSLQRPGRFQIRGH*
Ga0070663_1000999693	3300005455	Corn Rhizosphere	VSGPPPHTTFVSRGRLNGVLRQGPSGGGPVEASATQPGREHSVDELDTQTFEALHYRARLILGEPLQRPGRFQLRGH*
Ga0070678_1005909332	3300005456	Miscanthus Rhizosphere	MSDAPQHTQFVSRGRLSGVVREHAAGGPAEGAGTQPGRERSALEDLDTQAFEALYYRARLILGEPLPRPPRFSRHGR*
Ga0070662_10000000796	3300005457	Corn Rhizosphere	VSDVPKHTRIVSRGRLRGVLRQAPSGGGPGEGSTQPGRERSAVDDLDTQAFEALYYRARLILGETLPRPGRFGRQSL*
Ga0068867_1000002945	3300005459	Miscanthus Rhizosphere	VSETPQHTRFVSRGSLNGVVRERAAGSGPAEGAGTQPGRERNALEDLDTQAFEALYYRARLILGEPLPRPARFQRGAR*
Ga0068853_10000240316	3300005539	Corn Rhizosphere	MDSAPEHTRFVSRGRLNGVLRQNPVGGGPAEGAATQPGREQSGLDELDTQAFEALYYRARLILGEPLPRPARFQLRGH*
Ga0070665_100000068197	3300005548	Switchgrass Rhizosphere	MDSAPEHTRFVSRGRLNGVLRQHPGGGGAADVPATQPGREQHGVEDLDTQAFEALYYRARLILGEPLPRPARFQLRGH*
Ga0066654_100400522	3300005587	Soil	MDSAPEHTKFVSRGRLNGVLRQNPVGGGGLAEGTGTQPGREQSGLDELDTQAFEALYYRARLILGEPLPRPARFPLRGH*
Ga0068856_10000572012	3300005614	Corn Rhizosphere	MSEAPQHTTFVSLGSLNGVLRQHPVGGGPADAAATQPGREQHAVDELDTQTFEALYYRARLILGEPLPRPGRFQGRGR*
Ga0068856_1012003263	3300005614	Corn Rhizosphere	MDSAPEHTRFVSRGRLNGVLRQHPVGGGGPAEGAGTQPGREQSGLDELDTQAFEALYYRARLILGEPLPRPARFQLRGH*
Ga0070702_1006892412	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	MSDAPQHTRFVSRGRLNGVVREHAAGGPAEGAGTQPGRERSALEDLDTQAFEALYYRARLILGEPLPRPARFQRGAR*
Ga0068852_1001683682	3300005616	Corn Rhizosphere	VSDAPKHTRIVSRGRLRGVLRQAPSGGGPGESATQPGRERSAVDDLDTQAFEALYYRARLILGEPLPRPGRFGQRGH*
Ga0068863_100000004171	3300005841	Switchgrass Rhizosphere	MSDAPQSTQFVSRGRLNGVLRQRPSGGGPVDGASTQPGREQSGLDELDTQAFEALYYRARLILGEPLPRPGRFQIRGH*
Ga0075287_10419892	3300005873	Rice Paddy Soil	PKHTRIVSRGRLQGVLRQAPSGGGPGETSTQPGRERSAVDDLDTQAFEALYYRARLILGEPLPRPGRFGLRGH*
Ga0075288_10078451	3300005874	Rice Paddy Soil	DAPKHTRIVSRGRLQGVLRQAPSGGGPGETSTQPGRERSAVDDLDTQAFEALYYRARLILGEPLPRPGRFGLRGH*
Ga0075291_10015193	3300005884	Rice Paddy Soil	VSDAPKHTRIVSRGRLQGVLRQAPSGGGPGETSTQPGRERSAVDDLDTQAFEALYYRARLILGEPLPRPGRFGLRGH*
Ga0075291_10283801	3300005884	Rice Paddy Soil	MSDTPQHTQFVSRGRLSGVVREHAAGGPAEGVGTQPGRERSALEDLDTQAFEALYYRARLILGEPLPRPARFQRGAR*
Ga0066652_1002822812	3300006046	Soil	VSDAPQRTQFVSRGRLSGVVREPVGGGGPADGSATQPGREQGGLEELDTQAFEALYYRARLILGEPLPRPPRFQLRGH*
Ga0070715_1000000155	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MSDAPQHTQFVSRGRLSGVVREHAAGGPAEGAGTQPGRERNALEDLDTQAFEALYYRARLILGEPLPRPARFRGPNR*
Ga0070716_1011822241	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MVNKNKKGDMVNGPPLKTTFVSRGRLNGVLRQGPPGGGLAEGAGTQPGRERSSVDELDTQTFEALYYRARLILGEPLPRPGRFQLRGH*
Ga0074051_110405171	3300006572	Soil	VSNVPKHTRIVSRGRLQGVLRQAPSGGGPGETSTQPGRERSAVDDLDTQAFEALYYRARLILGEPLPRPGRFGLRGH*
Ga0074047_116955941	3300006576	Soil	VSNVPKHTRIVSRGRLQGVLRQAPSGGGPGETSTQPGRERSAVDDLDTQAFEALYYRARLILGEPLPRPGRFGRQSL*
Ga0075430_1004041241	3300006846	Populus Rhizosphere	VSTEPSHTTFVSRGRLNGVLRQPVGGGPAEGGSTQPGRERKDIDELDTQTFEALHYRARLILGDSLPRPGRFQIRGH*
Ga0079219_101661233	3300006954	Agricultural Soil	MNDGPERTKFVLRGRVNGVLRQGPVGGGPADAAATQPGRERSVDDLDTQTFEALYYRARLILGESLPRPGRFGPHQR*
Ga0075435_1011844112	3300007076	Populus Rhizosphere	VSDAPQHTQFVSRGRLNGVVRQRPSGGGPAEGANTQPGRERSGLEELDTEVFEALYYRARLILGEPLPRPGRFAVRGH*
Ga0105245_100231822	3300009098	Miscanthus Rhizosphere	MDSAPEHTRFVSRGRLNGVLRQHPGGGGPADVPATQPGREQHGVEDLDTQAFEALYYRARLILGEPLPRPARFQVRGH*
Ga0105237_125970491	3300009545	Corn Rhizosphere	VSGVPEHTKFTSRGRLSGVYRQPVGGGPAEAAATQPGREQSGVDELDTQAFEALYYRARLILGEPLPRPARFQLRGH*
Ga0105238_1000002376	3300009551	Corn Rhizosphere	MVNKPKKGEEPVSDAPQKTTFSSRGRLNGVLRQGPVGGGPADAAATQPGRERHAVDELDTQTFEALHYRARLILGEPLPRPGRFQLRGH*
Ga0134080_104570531	3300010333	Grasslands Soil	MSGNSQQTQFVSRGKLNGVLRQRSSGGVAPDSTITQPGRERSGVDDLDTEVFEALYYRARLILGESLPRPGRFGARGR*
Ga0126377_101559422	3300010362	Tropical Forest Soil	VSEAPEKTRFVSRGRLNGVLRDPVGGGAAEGASTQPGRERSGLEELDTQAFEALYYRARLILGEPLPRPARFQLRGH*
Ga0126377_101711231	3300010362	Tropical Forest Soil	LNGVLRQDPVGGGPADAAATQPGREQHAIDDLDTQAFEALYYRARLILGEPLARPGRFQLRGH*
Ga0105239_102607491	3300010375	Corn Rhizosphere	VSDAPQHTQFVSRGRLNGVVRQRPSGGGPAEGANTQPGRERSGLEELDTEVFEALYYRARLILGEPLPRPGRFAIRGH*
Ga0134122_100064032	3300010400	Terrestrial Soil	VSKAPQHTRFVSRGRLNGVAREPAAGSGPAEGAGTQPGRERNALEDLDTQAFEALYYRARLILGEPLPRPARFQRGAR*
Ga0134121_1000010445	3300010401	Terrestrial Soil	MSDAPQHTQFVSRGRLSGVVREHAAGGPAEGAGTQPGRERSALEDLDTQAFEALYYRARLILGEPLPRPTRFRGPNR*
Ga0134123_104776232	3300010403	Terrestrial Soil	MSDAPQHTQFVSRGRLSGVVREHAAGGPAEGAGTQPGRERSALEDLDTQAFEALYYRARLILGEPLPRPVRFRGPNR*
Ga0153963_10051463	3300012070	Attine Ant Fungus Gardens	VSGAPEHTKFVSRGRLNGVFRQPVGGGPAEGIATQPGRERSGTGELDTQAFEALYYRARLILGEPLPRPARFQLRGH*
Ga0157338_10521041	3300012515	Arabidopsis Rhizosphere	VSASPDTTKFVSRGRLNGVLRQRPVGGGPPEGSSTQPGRERMGADELDTQAFEALYYRARLILGEPLPRPSRFQLRGH*
Ga0157289_100010674	3300012903	Soil	MVNKTKKGGPMDSAPEHTKFVSRGRLNGVLRQHPGGGGPADVPATQPGREQHGTDDLDTQAFEALYYRARLILGEPLPRPARFQLRGH*
Ga0157290_100004674	3300012909	Soil	VSDSPEQTRFISRGKLNGVLRDPIGGGPAEGASTQPGRERGVTDDLDTQTFEALYYRARLILGEPLPRPGRFGLRGH*
Ga0157301_100958872	3300012911	Soil	VSGAPEHTKFVSRGRLNGVYRQPVGGGPTEGIATQPGREQSGTDELDTQAFEALYYRARLILGEPLPRPARFQLRGH*
Ga0157297_101093892	3300012914	Soil	MDSAPEHTKFGSRGRLNGVLRQHPGGGGPADVPATQPGREQHGVDDLDTQAFEALYYRARLILGEPLPRPARFQLRGH*
Ga0157310_100025254	3300012916	Soil	MDNAPEQTKFVSRGRLNGVLRQHPGGGGPADVPATQPGREQHGTDDLDTQAFEALYYRARLILGEPLPRPARFQLRGH*
Ga0164298_100008923	3300012955	Soil	MDSAPEHTKFVSRGRLNGVLRQHPGGGGPADVPATQPGREQHGTDDLDTQAFEALYYRARLILGEPLPRPARFQLRGH*
Ga0164304_109440582	3300012986	Soil	SRGRLNGVLRQHPVGGGPVEGAATQPGREQSGLDELDTQAFEALYYRARLILGEPLPRPARFPLRGH*
Ga0157378_116737722	3300013297	Miscanthus Rhizosphere	VCDAPQQTKFDSRGRLTGVARQQPSGGGPAEGANTQPGRERSGLEELDTEVFEALYYRARLILGEPLPRPGRFGTRSH*
Ga0157378_131790741	3300013297	Miscanthus Rhizosphere	PVSGPPTHTTFVSRGRLNGVLRQGPSGGGPVEAGTTQPGREHVVDELDTQTFEALHYRARLILGEPLQRPGRFQVRGH*
Ga0157375_117984512	3300013308	Miscanthus Rhizosphere	VSDAPQHTKFVSRGRLNGVVRQHPGGGGPGEGAGTQPGREQSTLDELDTQTFEALYYRARLILGEPLPRPARFQLRGR*
Ga0163163_104623172	3300014325	Switchgrass Rhizosphere	VTDTPKRTRIVSRGRLRGVLRQAASGGGPGETSTQPGRERSAVDDLDTQAFEALYYRARLILGEPLPRPGRFGQRGH*
Ga0157380_1000048714	3300014326	Switchgrass Rhizosphere	MVNKPKKGEPMSPAPRHTKFVSRGRLNGVLRQAPAGGGPAEGAATQPGRERKNLDELDTQAFEALYYRARLILGESLPRPARFQIRGH*
Ga0182021_134973112	3300014502	Fen	VSGVPEHTKFISRGRLSGVYRQPVGGGPAEAAATQPGREQSGVDELDTQAFEALYYRARLILGEPLPRPARFQLRGH*
Ga0157379_100767313	3300014968	Switchgrass Rhizosphere	VSGAPEHTKFVSRGRLNGVYRQPVGGGPAEGIATQPGREQSGTEELDTQAFEALYYRARLILGEPLPRPARFQLRGH*
Ga0157379_101608923	3300014968	Switchgrass Rhizosphere	VSDAPQQTRFIARGRLNGVVRERAGGGPTDGGRTQPKRERSALEEMDTQAFEALYYRARLILGEPLPRPPRFQRRGR*
Ga0167645_10005120	3300015068	Glacier Forefield Soil	MVNKTKKGEPMDSAPEHTRFVSRGRLNGVLRQHPVGGGGPAEGAGTQPGREQSGLDELDTQAFEALYYRARLILGEPLPRPARFPLRGH*
Ga0132258_107911073	3300015371	Arabidopsis Rhizosphere	MVNKPKKGEPVSDAPQHTQFVSRGRLNGVVRQRPSGGGPAEGANTQPGRERSNLEELDTEVFEALYYRARLILGEPLPRPGRFGARGR*
Ga0163161_1000001330	3300017792	Switchgrass Rhizosphere	MVNKNEKGDAVNGPPTQTTFVSRGRLNGVLRQGPPGGGAAEGSSTQPGREQSSVDELDTQAFEALYYRARLILGEPLPRPGRFQLRGH
Ga0163161_101911872	3300017792	Switchgrass Rhizosphere	MSDAPQSTQFVSRGRLNGVLRQRPSGGGQVDGASTQPGREQSGLDELDTQAFEALYYRARLILGEPLPRPGRFQLRGH
Ga0190265_100952402	3300018422	Soil	MSAPPPNTRFVSRGRLNGVLRQPTGGGPAAGSTQPAREQIGTDEVDTQTYEAVYYRARLVLGDSLPRPPRFQLRGH
Ga0190272_100005112	3300018429	Soil	MSAPPPTTRFVSRGRLNGVLRQPSAGAPTTGNTQPAREQIGTDEVDTQTYEAVYYRARLVLGDSLPRPPRFQLRGH
Ga0190272_100265522	3300018429	Soil	MSDAPQHTKFVSRGRLNGVLRQHPVGGGPADAAATQPGREQHAVDDLDTQTFEALYYRARLILGEPLPRPGRFELRGH
Ga0066655_101339872	3300018431	Grasslands Soil	MDSAPEHTKFVSRGRLNGVLRQNPVGGGGLAEGTGTQPGREQSGLDELDTQAFEALYYRARLILGEPLPRPARFPLRGH
Ga0190274_101639002	3300018476	Soil	MDSAPEHTKFVSRGRLNGVLRQHPGGGGPADVPATQPGREQHGVDDLDTQAFEALYYRARLILGEPLPRPARFQLRGH
Ga0193707_10436952	3300019881	Soil	VSGPPPHTTFVSRGRLNGVLRQGPSGGGPVEASATQPGREHSVDELDTQTFEALHYRARLILGEPLQRPGRFQLR
Ga0193741_10683322	3300019884	Soil	VSPDPSHTTFVSRGRLNGVLRQPVGGGPAEGAATQPGRERQGPDELDTQAFEALYYRARLILGDSLQRPARFQIPGR
Ga0193726_12844432	3300020021	Soil	VSGPPPHTTFVSRGRLNGVLRQGPSGGGSVEASATQPGREYSVDELDTQTFEALHYRARLILGEPLQRPGRFQLRGH
Ga0210397_103066772	3300021403	Soil	VSGAPEHTKFISRGRLSGVYRQPVGGGPAEAAATQPGREQSVDELDTQAFEALYYRARLILGEPLPRPARFPLRGH
Ga0247672_10761691	3300024187	Soil	MSDAPQHTQFVSRGRLNGVVRERAAGSGPAEGVSTQPGRERSALEDLDTQAFEALYYRARLILGEALPRPARFRGGVR
Ga0207682_1000003439	3300025893	Miscanthus Rhizosphere	VSGAPEHTKFVSRGRLSGVYRQPVGGGPTEGIATQPGREQSGTDELDTQAFEALYYRARLILGEPLPRPARFQLRGH
Ga0207642_1000000686	3300025899	Miscanthus Rhizosphere	MSDVPQHTQFVSRGRLNGVVREHAAGGPAEGTGTQPGRERNALEDLDTQAFEALYYRARLILGEPLPRPARFQRGAR
Ga0207685_1000001156	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	MSDAPQHTQFVSRGRLSGVVREHAAGGPAEGAGTQPGRERNALEDLDTQAFEALYYRARLILGEPLPRPARFRGPNR
Ga0207707_100211132	3300025912	Corn Rhizosphere	MDSAPEHTRFVSRGRLNGVLRQHHVGGGGPAEGAGTQPGREHGGVDELDTQAFEVLYYRARLILGEPLPRPERFQLRGR
Ga0207663_1000122710	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	VDAPDTTTFVSRGRLNGTIRQPAGGGPGDGHNTQPGREKAGTDDLDTQAFEALYYRARLILGEPLPRPGRFQLRGH
Ga0207681_103139932	3300025923	Switchgrass Rhizosphere	VSKAPQHTRFVSRGRLNGVVRERAAGNGPAEGAGTQPGRERSALEDLDTQAFEALYYRARLILGEPLPRPARFRRGAR
Ga0207694_10000004764	3300025924	Corn Rhizosphere	VSDAPQKTTFSSRGRLNGVLRQGPVGGGPADAAATQPGRERHAVDELDTQTFEALHYRARLILGEPLPRPGRFQLRGH
Ga0207687_1000005584	3300025927	Miscanthus Rhizosphere	MDSAPEHTRFVSRGRLNGVLRQHPGGGGPADVPATQPGREQHGVEDLDTQAFEALYYRARLILGEPLPRPARFQVRGH
Ga0207706_1000001890	3300025933	Corn Rhizosphere	VSDVPKHTRIVSRGRLRGVLRQAPSGGGPGEGSTQPGRERSAVDDLDTQAFEALYYRARLILGETLPRPGRFGRQSL
Ga0207709_109380331	3300025935	Miscanthus Rhizosphere	VSGPPPHTTFVSRGRLNGVLRQGPSGGGPVEASATQPGREHSVDELDTQTFEALHYRARLILGEPLQRPGRFQLRGH
Ga0207689_116291691	3300025942	Miscanthus Rhizosphere	RTQFVSRGRLNGVLRQAAGGGPTEGSTTQPGRERSVDELDTQAFEALYYRARLILGESLPRPGRFQVRGH
Ga0207661_1000200310	3300025944	Corn Rhizosphere	VSGAPEHTKFISRGRLSGVYRQPVGGGPVEAAATQPGREQSGVDDLDTQAFEALYYRARLILGEPLPRPARFQRGR
Ga0207651_100423342	3300025960	Switchgrass Rhizosphere	VSEAPQHTQFVSRGRLNGVVREHATGSGPAEGAGTQPGRERNALEDLDTQAFEALYYRARLILGEPLPRPPRFQLRGH
Ga0207712_1000000749	3300025961	Switchgrass Rhizosphere	VSGAPEHTKFVSRGRLNGVYRQPVGGGPAEGIATQPGREQSGTEELDTQAFEALYYRARLILGEPLPRPARFQLRGH
Ga0207658_116017492	3300025986	Switchgrass Rhizosphere	MVNKNEKGDAVNGPPTQTTFVSRGRLNGVLRQGPQGGGPAEGSSTQPGREQSSVDELDTRAFEALYYRARLILGEPLPRPGRFQLRGH
Ga0208777_10040552	3300025996	Rice Paddy Soil	MSDTPQHTQFVSRGRLSGVVREHAAGGPAEGVGTQPGRERSALEDLDTQAFEALYYRARLILGEPLPRPARFQRGAR
Ga0208777_10172962	3300025996	Rice Paddy Soil	PKHTRIVSRGRLQGVLRQAPSGGGPGETSTQPGRERSAVDDLDTQAFEALYYRARLILGEPLPRPGRFGLRGH
Ga0207677_1000004644	3300026023	Miscanthus Rhizosphere	VSDAPKHTRIVSRGRLQGVLRQAPSGGGPGETSTQPGRERSAVDDLDTQAFEALYYRARLILGEPLPRPGRFGQRDH
Ga0207703_1000031035	3300026035	Switchgrass Rhizosphere	MDSAPEHTRFVSRGRLNGVLRQHPGGGGAADVPATQPGREQHGVEDLDTQAFEALYYRARLILGEPLPRPARFQLRGH
Ga0207639_100042736	3300026041	Corn Rhizosphere	MDSAPEHTRFVSRGRLNGVLRQNPVGGGPAEGAATQPGREQSGLDELDTQAFEALYYRARLILGEPLPRPARFQLRGH
Ga0207708_100490573	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	VSQAPQHTRFVSRGRLNGVLRQTAGGGPTEGGTTQPGREGSVDELDTQTFEALYYRARLILGDSLQRPGRFQIRGH
Ga0207702_1000206912	3300026078	Corn Rhizosphere	MSEAPQHTTFVSLGSLNGVLRQHPVGGGPADAAATQPGREQHAVDELDTQTFEALYYRARLILGEPLPRPGRFQGRGR
Ga0207702_108562592	3300026078	Corn Rhizosphere	MDSAPEHTRFVSRGRLNGVLRQHPVGGGGPAEGAGTQPGREQSGLDELDTQAFEALYYRARLILGEPLPRPARFQLRGH
Ga0207702_122100702	3300026078	Corn Rhizosphere	MDSAPEYTRFVSRGRLNGVLRQNPVGGGAVEGATTQPGREQSGLDELDTQAFEALYYRARLILGEPLPRPARFQLRGH
Ga0207702_122326682	3300026078	Corn Rhizosphere	MSDVPQHTQFVSRGRLNGVVREHAAGGPAEGTGTQPGRERNALEDLDTQAFEALYYRARLILGEPLP
Ga0207641_1000017022	3300026088	Switchgrass Rhizosphere	MSDAPQSTQFVSRGRLNGVLRQRPSGGGPVDGASTQPGREQSGLDELDTQAFEALYYRARLILGEPLPRPGRFQIRGH
Ga0207648_1000497512	3300026089	Miscanthus Rhizosphere	VSETPQHTRFVSRGSLNGVVRERAAGSGPAEGAGTQPGRERNALEDLDTQAFEALYYRARLILGEPLPRPARFQRGAR
Ga0207683_105569972	3300026121	Miscanthus Rhizosphere	MSDAPQHTQFVSRGRLSGVVREHAAGGPAEGAGTQPGRERSALEDLDTQAFEALYYRARLILGEPLPRPPRFSRHGR
Ga0207698_100672443	3300026142	Corn Rhizosphere	VSDAPKHTRIVSRGRLRGVLRQAPSGGGPGESATQPGRERSAVDDLDTQAFEALYYRARLILGEPLPRPGRFGQRGH
Ga0208987_10019262	3300027496	Forest Soil	MDSAPEHTRFVSRGRLNGVLRQHPVGGGGPAEGTGTQPGREQSGLDELDTQAFEALYYRARLILGEPLPRPARFQLRGH
Ga0208998_10060452	3300027524	Forest Soil	MDSAPEHTKFVSRGRLNGVLRQHPVGGGGPAEGTGTQPGREQSGLDELDTQAFEALYYRARLILGEPLPRPARFQLRGH
Ga0207981_10330792	3300027560	Soil	MSDAPKQTRVISRGRISGVLRQHPGGGGRGDAATQPARERSSVDDLDTQAFEALYYRARLILGEPLPRPGRFGLRGH
Ga0207981_10985332	3300027560	Soil	VSNVPKHTRIVSRGRLQGVLRQAPSGGGPGETSTQPGRERSAVDDLDTQAFEALYYRARLILGEPLPRPGRFGRQSL
Ga0209461_1000005443	3300027750	Agave	MSAPPPTTRFVSRGRLNGVLRQPTGGDPATSGNTQPAREQIGAGEVDTQTYEAVYYRARLVLGDSLPRPPRFQLRGH
Ga0307309_101025561	3300028714	Soil	VSDAPQHTQFVSHGRLNGVVRQRPSAGGPAEGANTQPGRERSGLEELDTQVFEALYYRARLILGEPLPRPGRFGIPGH
Ga0307283_102529851	3300028790	Soil	MDSAPEHTRFVSRGRLNGVLRQHPGGGGPADVPATQPGREQHGVEDLDTQAFEALYYRARLILGEPLPRPARFPLRGH
Ga0307503_1000002794	3300028802	Soil	MNDPPSKTTFVSRGRLNGVLRQGPPGGGLAEGSGTQPGRERGSVDELDTQTFEALYYRARLILGEPLPRPGRFQLRGH
Ga0307310_102502382	3300028824	Soil	VSDAPQHTQFVSHGRLNGVVRQRPSAGGPAEGANTQPGRERSGLEELDTHVFEALYYRARLILGEPLPRPGRFGIPGH
Ga0307495_100483121	3300031199	Soil	VSAPLPQTRFVSRGSLQGVLRQRPAGGGASEGAATQPGREQSGLDELDTQTFEALYYRARLILGEPLPRPGRFQLRGH
Ga0307496_100193122	3300031200	Soil	MSEAPQHTRFVSRGRLNGVLRQHPVGGGPADAAATQPGREQHAVDELDTQAFEALYYRARLILGEPLARPGRFQGRGR
Ga0308176_119727952	3300031996	Soil	MDSAPEHTRFVSRGRLNGVLRQNPVGGGPAEGAATQPGREQSGLDELDTQAFEALYYRARLILGEPLPRPARFQLR
Ga0310897_101799262	3300032003	Soil	VSDAPKHTRIVSRGRLQGVLRQAPGGGRAGETSTQPGRERSAVDDLDTQTFEALYYRARLILGEPLPRPGRFGRGH
Ga0335085_100944105	3300032770	Soil	VSDAPKRTRMVSRGRLNGVLRQGPSGGGSGEAATQPGRERSAIDDLDTQAFEALYYRARLILGE
Ga0372943_0052366_1875_2144	3300034268	Soil	MVNKTKKGEPMDSAPEHTRFVSRGRLNGVLRQNPVGGGGLAEGTGTQPGREQSGLDELDTQAFEALYYRARLILGEPLPRPARFPLRGH

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F061187

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences