NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F061164

Metagenome / Metatranscriptome Family F061164

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F061164
Family Type Metagenome / Metatranscriptome
Number of Sequences 132
Average Sequence Length 55 residues
Representative Sequence VSGMRKRSSWLLSCLTLLAVSAQAQTVGESPLGSAVERQLPMEQPFAPWARDPE
Number of Associated Samples 108
Number of Associated Scaffolds 132

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 0.00 %
% of genes near scaffold ends (potentially truncated) 0.00 %
% of genes from short scaffolds (< 2000 bps) 0.00 %
Associated GOLD sequencing projects 103
AlphaFold2 3D model prediction Yes
3D model pTM-score0.35

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (100.000 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil
(46.970 % of family members)
Environment Ontology (ENVO) Unclassified
(50.758 % of family members)
Earth Microbiome Project Ontology (EMPO) Unclassified
(52.273 % of family members)



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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: Yes Secondary Structure distribution: α-helix: 39.02%    β-sheet: 0.00%    Coil/Unstructured: 60.98%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.35
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 132 Family Scaffolds
PF01345DUF11 23.48
PF00106adh_short 0.76
PF07690MFS_1 0.76
PF03641Lysine_decarbox 0.76
PF00144Beta-lactamase 0.76

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 132 Family Scaffolds
COG1611Nucleotide monophosphate nucleosidase PpnN/YdgH, Lonely Guy (LOG) familyNucleotide transport and metabolism [F] 0.76
COG1680CubicO group peptidase, beta-lactamase class C familyDefense mechanisms [V] 0.76
COG1686D-alanyl-D-alanine carboxypeptidaseCell wall/membrane/envelope biogenesis [M] 0.76
COG2367Beta-lactamase class ADefense mechanisms [V] 0.76


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Phylogeny

NCBI Taxonomy

NameRankTaxonomyDistribution
UnclassifiedrootN/A100.00 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil46.97%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil9.09%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil6.82%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil6.06%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil3.79%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil3.79%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere3.79%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil2.27%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil2.27%
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil1.52%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil1.52%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil1.52%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere1.52%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds0.76%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.76%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil0.76%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil0.76%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil0.76%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland0.76%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere0.76%
Termite GutHost-Associated → Arthropoda → Digestive System → Gut → Unclassified → Termite Gut0.76%
EctomycorrhizaHost-Associated → Plants → Roots → Unclassified → Unclassified → Ectomycorrhiza0.76%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.76%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere0.76%
Boreal Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil0.76%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001593Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2EnvironmentalOpen in IMG/M
3300005343Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaGEnvironmentalOpen in IMG/M
3300005437Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaGEnvironmentalOpen in IMG/M
3300005439Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaGEnvironmentalOpen in IMG/M
3300005578Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2Host-AssociatedOpen in IMG/M
3300005610Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3EnvironmentalOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300006174Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014EnvironmentalOpen in IMG/M
3300006175Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaGEnvironmentalOpen in IMG/M
3300006176Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5EnvironmentalOpen in IMG/M
3300006796Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114EnvironmentalOpen in IMG/M
3300006804Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200EnvironmentalOpen in IMG/M
3300009038Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaGEnvironmentalOpen in IMG/M
3300009101Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaGHost-AssociatedOpen in IMG/M
3300009143Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2EnvironmentalOpen in IMG/M
3300010046Tropical forest soil microbial communities from Panama - MetaG Plot_36EnvironmentalOpen in IMG/M
3300010162Labiotermes labralis P1 segment gut microbial communities from Petit-Saut dam, French Guiana - Lab288 P1 (version 2)Host-AssociatedOpen in IMG/M
3300010366Tropical forest soil microbial communities from Panama - MetaG Plot_24EnvironmentalOpen in IMG/M
3300010376Tropical forest soil microbial communities from Panama - MetaG Plot_28EnvironmentalOpen in IMG/M
3300010379Sb_50d combined assemblyEnvironmentalOpen in IMG/M
3300010398Tropical forest soil microbial communities from Panama - MetaG Plot_35EnvironmentalOpen in IMG/M
3300010880Boreal forest soil eukaryotic communities from Alaska, USA - C5-1 Metatranscriptome (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300011270Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaGEnvironmentalOpen in IMG/M
3300012685Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaGEnvironmentalOpen in IMG/M
3300012929Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012971Tropical forest soil microbial communities from Panama - MetaG Plot_1EnvironmentalOpen in IMG/M
3300012975Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015EnvironmentalOpen in IMG/M
3300012984Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MGEnvironmentalOpen in IMG/M
3300016270Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080EnvironmentalOpen in IMG/M
3300016371Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172EnvironmentalOpen in IMG/M
3300016387Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176EnvironmentalOpen in IMG/M
3300016404Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082EnvironmentalOpen in IMG/M
3300018058Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MGEnvironmentalOpen in IMG/M
3300020581Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-MEnvironmentalOpen in IMG/M
3300021181Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-OEnvironmentalOpen in IMG/M
3300021407Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-OEnvironmentalOpen in IMG/M
3300021559Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-MEnvironmentalOpen in IMG/M
3300021560Tropical forest soil microbial communities from Panama - MetaG Plot_4EnvironmentalOpen in IMG/M
3300024179Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK36EnvironmentalOpen in IMG/M
3300025922Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025931Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026078Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026330Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133 (SPAdes)EnvironmentalOpen in IMG/M
3300027039Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 14 (SPAdes)EnvironmentalOpen in IMG/M
3300027063Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 37 (SPAdes)EnvironmentalOpen in IMG/M
3300027313Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 45 (SPAdes)EnvironmentalOpen in IMG/M
3300027575Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O1 (SPAdes)EnvironmentalOpen in IMG/M
3300027874Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)EnvironmentalOpen in IMG/M
3300027884Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)EnvironmentalOpen in IMG/M
3300030969Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA12 Emin (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300031057Oak Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031128Oak Summer Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031231Coassembly Site 11 (all samples) - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031469Fir Spring Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031474Fir Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031543Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20EnvironmentalOpen in IMG/M
3300031546Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23EnvironmentalOpen in IMG/M
3300031549Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24EnvironmentalOpen in IMG/M
3300031561Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26EnvironmentalOpen in IMG/M
3300031668Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23EnvironmentalOpen in IMG/M
3300031679Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23EnvironmentalOpen in IMG/M
3300031680Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22EnvironmentalOpen in IMG/M
3300031681Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20EnvironmentalOpen in IMG/M
3300031682Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22EnvironmentalOpen in IMG/M
3300031713Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22EnvironmentalOpen in IMG/M
3300031719Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)EnvironmentalOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M
3300031747Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22EnvironmentalOpen in IMG/M
3300031751Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24EnvironmentalOpen in IMG/M
3300031754Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515EnvironmentalOpen in IMG/M
3300031764Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27EnvironmentalOpen in IMG/M
3300031771Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19EnvironmentalOpen in IMG/M
3300031777Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24EnvironmentalOpen in IMG/M
3300031779Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22EnvironmentalOpen in IMG/M
3300031781Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20EnvironmentalOpen in IMG/M
3300031782Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20EnvironmentalOpen in IMG/M
3300031793Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21EnvironmentalOpen in IMG/M
3300031798Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19EnvironmentalOpen in IMG/M
3300031831Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f20EnvironmentalOpen in IMG/M
3300031845Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18EnvironmentalOpen in IMG/M
3300031890Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)EnvironmentalOpen in IMG/M
3300031893Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28EnvironmentalOpen in IMG/M
3300031896Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19EnvironmentalOpen in IMG/M
3300031941Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080EnvironmentalOpen in IMG/M
3300031942Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176EnvironmentalOpen in IMG/M
3300031945Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082EnvironmentalOpen in IMG/M
3300031946Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172EnvironmentalOpen in IMG/M
3300032001Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)EnvironmentalOpen in IMG/M
3300032008Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18EnvironmentalOpen in IMG/M
3300032010Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22EnvironmentalOpen in IMG/M
3300032035Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170EnvironmentalOpen in IMG/M
3300032044Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20EnvironmentalOpen in IMG/M
3300032052Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19EnvironmentalOpen in IMG/M
3300032059Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27EnvironmentalOpen in IMG/M
3300032060Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18EnvironmentalOpen in IMG/M
3300032064Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17EnvironmentalOpen in IMG/M
3300032067Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22EnvironmentalOpen in IMG/M
3300032076Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)EnvironmentalOpen in IMG/M
3300032089Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23EnvironmentalOpen in IMG/M
3300032091Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25EnvironmentalOpen in IMG/M
3300032094Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25EnvironmentalOpen in IMG/M
3300032160Sb_50d combined assembly (MetaSPAdes)EnvironmentalOpen in IMG/M
3300032174Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05EnvironmentalOpen in IMG/M
3300032261Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)EnvironmentalOpen in IMG/M
3300032893Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1EnvironmentalOpen in IMG/M
3300033180Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EMHost-AssociatedOpen in IMG/M
3300033289Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108EnvironmentalOpen in IMG/M
3300033290Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI12635J15846_1036317313300001593Forest SoilVSGLRKRSSWLLTCLTLVAASAQAQSVDASPLGSAVERQLPSEQPLAPWARDPEQIRTEAGD
Ga0070687_10085001423300005343Switchgrass RhizosphereVNGIRKRSCWFVGCLLVAASVQAQTVGEAPLGNDVERQLPMEQPFAPWARDPEQIKTE
Ga0070710_1047055323300005437Corn, Switchgrass And Miscanthus RhizosphereVNGIRKRSCWFVGCLLVAASVQAQTVGEAPLGNDVERQLP
Ga0070711_10170136713300005439Corn, Switchgrass And Miscanthus RhizosphereVSGMRRRSPWLLSWLTLVAVSAQAQTVGETPLGSAVERQLPVEQPAPWARDPEQIRTEAGDRLE
Ga0070711_10184638023300005439Corn, Switchgrass And Miscanthus RhizosphereVSGMRKRSSWLLTCLTLVAASAQAQSVAESPLGSVVERQLPMEQPFAPWARDPEQIRTE
Ga0068854_10046988523300005578Corn RhizosphereVSTLRKRSSWILGCLMLVAASAQAQTVDEAPLGSAIERQLPTEPSSVPWARDPEQIKTETGDRLEKRQVQAES
Ga0070763_1027888223300005610SoilVSGMRKRSSWLLACLTLVAASAQAQTVGETPLGSAVERQLPIEQPAALARDPEQIKTEAGDRLEQRQVLTE
Ga0066903_10838530223300005764Tropical Forest SoilVSGAGKLSLWLLCGLTLLATGARAQTAGGTPLGSAVERQLSVEQPLPWARDPEQIKTEAGDRLEQQQVP
Ga0075014_10002260423300006174WatershedsVSGMRKRSSWLLACMTLVAASAQAQTVDTSPLGSAVERQLPIEQPAALARDPEQIKTEAGDRLEPRQV
Ga0070712_10031544513300006175Corn, Switchgrass And Miscanthus RhizosphereVSGMRKRSSWLLTCLTLVAASAQAQSVAESPLGSVVERQLPM
Ga0070765_10023008013300006176SoilVSSTRKRSSWVLTCLALLAASAQAEIVDETPLGSP
Ga0066665_1001969513300006796SoilVSGMRRRSCRLLTCLTLVAASAQAQSVGESPLGSAVERQ
Ga0079221_1074267513300006804Agricultural SoilVSTLRKRSSWILGCLMLVAASAQAQTVDEAPLGSAIERQLPTEPSSVPWARDPEQIKTEAGDR
Ga0099829_1102763323300009038Vadose Zone SoilVSGMRTPGSWLLACLMLVAASARAQTVGESSLGSAVERQLPMEQPYAPWARDPEQIRTEA
Ga0105247_1026589113300009101Switchgrass RhizosphereVNGIRKRSCWFVGCLLVAASVQAQTVGEAPLGNDVERQLPM
Ga0099792_1091819013300009143Vadose Zone SoilMKGPGRRGAWLLVGLTLLATGARAQTAGETRLGSAVERQL
Ga0126384_1092420513300010046Tropical Forest SoilMRKRSSWLLSWLTLIAVSAQAQTVGETPLGSAVERQLPVEQPAAWARDPEQIKTEAGDHLEP
Ga0131853_1137413623300010162Termite GutVSGTRKRSLWLLACLTLATAGAQAQTVADAPLGSDVERQLPTEQPLTPWARDPEQIKTESGDHFEKRQKLTESFET
Ga0126379_1134177223300010366Tropical Forest SoilVSRRRTCSRWPLGCLTLLGAGAHAQTVGESLLGSAVERQLPMEQPFAPWARDPAQIRTEAGDRL
Ga0126379_1155029223300010366Tropical Forest SoilMRKRSSWLLGCLTLLAVSAQAQTVGDSPLGSAIERQLPMEQPFAPRARDPAQIRTEAGDTLQPR
Ga0126379_1247254513300010366Tropical Forest SoilMRKRSSWLLSWLTLVAVSAQAQTVGETALGSAVERQLPVEQPAAWARDPEQIKTEAGDHLEPRQVLTE
Ga0126381_10399505313300010376Tropical Forest SoilMRKRGSWLLTCLTLLAAGAQAQTLGEAPLGSAIERQLPTEQPFAPWARDPEQIKTESGDR
Ga0136449_10284563613300010379Peatlands SoilVIGTRNRSSWLLACLTLVAASAQAQSVGDASLGSTVERPLST
Ga0126383_1297356913300010398Tropical Forest SoilMRKRSSWLLTCLTLLAASAQAQSLGEAPLGSAIERQLPTEQPFAPWARDPEQIKTESGDRLVKREVLTESFETVKLK
Ga0126350_1006560513300010880Boreal Forest SoilVNGMRKPSSWLITCLMLVAASAQAQTVGESSLGSAIERQLPMEQL
Ga0137391_1152517923300011270Vadose Zone SoilMRKPSSWLLTCLTLVAASAQAQTVDASPLGSAVERQLPMEQ
Ga0137397_1105966613300012685Vadose Zone SoilMRKRSSWLLTCLTLVAASAQAQSVAESPLGSVVERQLPMEQPFAPW
Ga0137404_1020426023300012929Vadose Zone SoilMKGPGRRGAWLLVGLTLLATGARAQTAGETPLGSAVVQQLSVEQPLPRARAPEQIKTEAGDRLEQQQVLA
Ga0126369_1117905923300012971Tropical Forest SoilMSGMRKRRCWLLSWLTLVAMSAQAQTVGETPLGSAVERQLSVEQPAA
Ga0134110_1010844823300012975Grasslands SoilMRKRSCRLLTCLTLVAASAQAQSVGESPLGSAVERQLPME
Ga0164309_1079237313300012984SoilMRRRSSWLLSWLTLVAVSAQAQTVGETPLGSAVERQLPVEQPA
Ga0182036_1181675113300016270SoilMSGMRKPGFLLLSWLTLVAVSAQAQTVGETPLGSAVERQLPIE
Ga0182034_1091608223300016371SoilVSGMRKPRSWLLGCLTLLAVSAQGQTVGDSPLGSAIERQLPM
Ga0182040_1151460523300016387SoilVNGTRWRSCWLLGWLTLLAVSAQAQTVGETSLGSAVERQLSIEQPAAWARDPEQIKTEAGDRLE
Ga0182037_1095893613300016404SoilMRKPSAWLWSWLTLLAVSAQAQTVGETPLGNPAERQLPVEQPATWARDPAQIKNEAGDRFEPRQVFAESFETV
Ga0187766_1023056123300018058Tropical PeatlandVSGMRRRSSWLLSWLTLVAVSAQGQTVGEAPLGSAVERQLPMEQPFAPWARDPE
Ga0210399_1048170323300020581SoilVSSTRKRSSWLLTCLALLAASAQAQAVDETPLGSPVERQLPT
Ga0210388_1042256623300021181SoilVSSISKHSSWLLACLTLVAASAQAQTVGETPLGSAVERQLPIEQPAALARDPEQIKTEAGDRL
Ga0210383_1112108213300021407SoilVSGMRKRSSWLLACLTLVAASAPAQTVGETPLGSAVERQLPIEQPAALA
Ga0210409_1081916223300021559SoilVSGMRKRSSWLLTCLTLVAASAQAQSIGESPLGSAVERQLPIEQPAAL
Ga0210409_1141472323300021559SoilVSSTRKRSSWLLTCLALLAASAQAQAVDETPLGSPVERQLPTDHPPATPW
Ga0126371_1232160023300021560Tropical Forest SoilVSTTRKRGPWLLALLTLVVASAQAQTIADSPLGNDVERQLSVEQPAPWARDPEQIKTEAGDHLEKRKVPTESFETVK
Ga0126371_1286159513300021560Tropical Forest SoilVSGLRKPGSWLLGCLTLVAAGAQAQTVGDSPLGSAVERQLPMEQPF
Ga0247695_101249713300024179SoilVSGMRKRSSWLLTCLTLVAASAQAQSVAESPLGSVVERQLPMEQPFAPWARDPEQ
Ga0207646_1128510823300025922Corn, Switchgrass And Miscanthus RhizosphereVSGMRKRSFWLLTCLTLFAAGAQAQTVGEAPLGSAVERQLPMEQPFAPWARDPERIRTESGDRLEPRQK
Ga0207644_1051956513300025931Switchgrass RhizosphereVNGIRKRSCWFVGCLLVAASVQAQTVGEAPLGNDVERQLPMEQPFAPWAR
Ga0207702_1036557113300026078Corn RhizosphereVNGMRRRSPWLLSCLTLVAASVQAQAVGDSPLGNDVERQLPMEQPFAP
Ga0209473_104396023300026330SoilVSGMRKRSCRLLTCLTLVAASAQAQSVGESPLGSAVERQLPMEQPFAPWARDP
Ga0207855_102651213300027039Tropical Forest SoilVSGVRKPSRWLLACLTLLAASARAQTVGESPLGSAAERQLSTEQTFVPWARDPEQIKTE
Ga0207762_103133113300027063Tropical Forest SoilMSGICTRSSWLLAGVLIAAHAQAQTVAESPLGSAVERQLPIEQP
Ga0207780_101666813300027313Tropical Forest SoilMSGICTRSSWLLAGVLIAAHAQAQTVAESPLGSAVERQLPIEQPPPWARDPEQIKT
Ga0209525_115395723300027575Forest SoilVNGMRKPSSWLLTCLMLVAASAQAQTVGESSLGSAIERQLPMEQL
Ga0209465_1036721633300027874Tropical Forest SoilMSGMRKARSWLLSCLTLLAVSAQGQTVGDSPLGSAIERQLPMEQPFAPRARDPAQI
Ga0209275_1040453923300027884SoilVSGMRKRSSWLLACLTLVAAGAQAQTVGETPLGSAVERQLPIEQ
Ga0075394_1169885423300030969SoilVSGMRKRSAWLLGCLTLVAAGAQAQSVAESPLGSVVERQLPMEQPFAPWARDPEQI
Ga0170834_10043604523300031057Forest SoilVSGMRKPSSWLLTCLMLVAASAQAQTVGESSLGSAVER
Ga0170834_11306193513300031057Forest SoilVNGMRRPSSWLLSWLTLVAVSAQAQAVGETPLGSAVERQLSIEQPAAWARDPEQIKTE
Ga0170823_1754103023300031128Forest SoilVNGMRRPSSWLLSWLTLVAVSAQAQAVGETPLGSAVERQLSIEQPAAWARDPEQIKTEAD
Ga0170824_10606676113300031231Forest SoilVNGMRRPSSWLLSWLTLVAVSAQAQAVGETPLGSAV
Ga0170824_12619858523300031231Forest SoilVNGMRKPCSWLLSWLTLVAVSAQAQAVGETPLGSAVERQLSIEQPAAWARDPE
Ga0170819_1300241623300031469Forest SoilVSGMRKPSSWLLTCLLLVAASAPAQTVGESSLGSAVERQLPMEQPYAPWARDPEQIR
Ga0170818_10743646813300031474Forest SoilVSGMRKPSSWLLTCLLLVAASAPAQTVGESSLGSAVERQLPMEQPYAPWARDPSRSG
Ga0170818_11524216723300031474Forest SoilVNGMRKPCSWLLGWLTLVAVSAQAQAVGETPLGSAVERQLSIEQPAAWARDPE
Ga0318516_1069246523300031543SoilVSGMRKRSSWLLSCVTLVAASTQAQTIVESPLGSAVERQLPMEQPFAPWARDPEQIRTEAGDTLQPRQVLTE
Ga0318516_1069396423300031543SoilVSGMRTTCRWLLACLTLVAAGAQAQTVGASPLGSAVERQLPIEQPFAPSARDPEQVKTEAGDTLEK
Ga0318538_1025592723300031546SoilVSGMRRRSVWFLTCLTLLAASAQAQTVGESTLGSAVERQLPMEQPFAPWARDPVQIK
Ga0318538_1047760513300031546SoilMSGLRKPGSWLLCCLMLMAASAQAQSVGETPLGSAVERQLPIDQPPASARDPEQIKTEAGDRLEPRQVL
Ga0318571_1042467913300031549SoilVSGMRKRSAWLLSWLTLLAVSAQAQTVGETPLGNPAERQLPVEQPAAWARDPEQIKT
Ga0318528_1024281923300031561SoilMRTTCRWLLACLTLVAAGAQAQTVGASPLGSAVERQLPIEQPFAPSARDP
Ga0318542_1035939713300031668SoilVSGMRKRSSWLLSCLTLLAVSAQAQTVGESPLGSAVERQLPMEQPFAPWARDPE
Ga0318561_1013536923300031679SoilVSGMRRRSVWFLTCLTLLAASAQAQTVGESTLGSAVERQLPMEQPFAPWARDP
Ga0318561_1015496923300031679SoilMSGLRKPGSWLLCCLMLMAASAQAQSVGETPLGSAVERQLPIDQPPA
Ga0318574_1076360723300031680SoilVSGMRKRSAWLLSWLTLLAVSAQAQTVGETPLGSAVERQLPVEQPAAWARDPEQIKTEAGDRF
Ga0318572_1009201823300031681SoilVNGRRTVSRWLLGCLTLLAAGAQAQTVGESPLASAVERQL
Ga0318560_1029796813300031682SoilMSGLRKPGSWLLCCLMLMAASAQAQSVGETPLGSAVERQLPIEQPFAPSARDPEQVKTEAGDTLEKRPVLA
Ga0318496_1053406723300031713SoilVSGMRKRSSWLLSCLTLLAVSAQAQTVGESPLGSAVERQ
Ga0306917_1066880313300031719SoilVSDLRKHGSWLLSCVTLVALSAQAQTVGETPLGSPVERHLPMETPFAPSA
Ga0307469_1127278513300031720Hardwood Forest SoilVSGMRRRSPWLLSWLTLVAVSAQAQTVGETPLGSAVERQLPVEQPA
Ga0318502_1003067413300031747SoilVSGMRTTCRWLLACLTLVAAGAQAQTVGASPLGSAVERQLPIEQPFAPSARDPEQVKTEA
Ga0318494_1071205813300031751SoilMRKRSSWLLSCVTLVAASTQAQTIVESPLGSAVERQLPMEQPFAPWARDPQQIRTEA
Ga0307475_1011041023300031754Hardwood Forest SoilVSGIRKRSSWLLTCLTLVAASAHAKTVGETPLGNDVKRQLPMEQPFAPWARDPPDLLEM
Ga0318535_1004605113300031764SoilVSGMRKRSAWLLSWLTLLAVSAQAQTVGETPLGNPAERQLPVEQPAAWARDPEQIKHEAGDRFEPRQVFAETFETVKLKNVIPP
Ga0318546_1003512613300031771SoilMSGLRKPGSWLLCCLMLMAASAQAQSVGETPLGSAVERQLPIDQPPASARDPEQIKTEAGDRLEPRQVLK
Ga0318546_1003518513300031771SoilVSGMRKRSAWLLSWLTLLAVSAQAQTVGETPLGSAVERQ
Ga0318543_1015677413300031777SoilVSDLRKHGSWLLSCVTLVALSAQAQTVGETPLGSPVER
Ga0318566_1008209613300031779SoilVSGMRKRSAWLLSWLTLLAVSAQAQTVGETPLGNPAERQLPVEQPAAWARDPEQIKHEAGDRFEPRQVFAETFETVKLKNVI
Ga0318547_1002562923300031781SoilVSGMRKRSAWLLSWLTLLAVSAQAQTVGETPLGSAVERQLPVEQPAAWARDPEQIKTEAG
Ga0318547_1007993523300031781SoilVNGRRTVSRWLLGCLTLLAAGAQAQTVGESPLASAVERQLPMEQPFAPWAR
Ga0318547_1098980213300031781SoilMSGLRKPGSWLLCCLMLMAASAQAQSVGETPLGSAVERQLPMEQPFAP
Ga0318547_1101181413300031781SoilVSGMRRRSVWFLTCLTLLAASAQAQTVGESTLGSAVERQL
Ga0318552_1012017623300031782SoilVNGRRTVSRWLLGCLTLLAAGAQAQTVGESPLASAV
Ga0318548_1040349713300031793SoilMSGMRKPGFLLLSWLTLVAVSAQAQTVGETPLGSAVERQLPIEQP
Ga0318523_1010914713300031798SoilVSGMRKRSAWLLSWLTLLAVSAQAQTVGETPLGNPAERQLP
Ga0318564_1019576713300031831SoilVNGRRTVSRWLLGCLMLLAAGAQAQTVGESPLASAVERQLPMEQPFAPGARDPAPIRNEAGDRLEPRQVLTESF
Ga0318511_1033401013300031845SoilVSGMRKRSSWLLTCLTLVAVSAQAQTVGETSLGSAVERQLSIEQPAAWARDPEQI
Ga0306925_1035541813300031890SoilVSSTRKRRFWLLASLTLVAASAQAQSVGDAPLGNDVERQLPVEQPAPWARDPGQIKTEAGDHLEKRKVPTESFETVKLKNV
Ga0306925_1116370413300031890SoilVSGMRTTCRWLLACLTLVAAGAQAQTVGASPLGSAVER
Ga0306925_1133415213300031890SoilVNGTRWRSCWLLGWLTLLAVSAQAQTVGETPLGNAVERQLPVEQPAPWARDPEQIRTEAGDRLE
Ga0306925_1133991923300031890SoilMSGLRKPGSWLLCCLMLMAASAQAQSVGETPLGSAVERQLPIDQPPAS
Ga0318536_1005375713300031893SoilVSGMRKRSSWLLTCLTLVAVSAQAQTVGETSLGSAVERQLSIEQPAAWARDPEQIKT
Ga0318536_1011382623300031893SoilVSGMRKRSAWLLSWLTLLAVSAQAQTVGETPLGNG
Ga0318551_1093069123300031896SoilVNGTRWRSCWLLGWLTLLAVSAQAQTVGETPLGNAVERQLPVEQPAPWARDPEQIRT
Ga0310912_1039348123300031941SoilVNGRRTVSRWLLGCLTLLAAGAQAQTVGESPLASAVERQLPMEQ
Ga0310916_1030878713300031942SoilVSGMRKRSAWLLSWLTLLAVSAQAQTVGETPLGNPAERQLPVEQPAAWARDPEQIKHEAGDRFEPRQVFAETFETVKLKNV
Ga0310916_1060289123300031942SoilVSGMRRRSVWFLTCLTLLAASAQAQTVGESTLGSAVERQLPMEQPFAPWARDPVQ
Ga0310913_1054139423300031945SoilMSGLRKPGSWLLCCLMLMAASAQAQSVGETPLGSAVERQLPIDQ
Ga0310910_1067965523300031946SoilVSGLRRHGSWLLSCVTLVALSAQAQTVGETPLGSPVERHLPMET
Ga0306922_1058944513300032001SoilVSDLRRHGSWLLSCVTLVALSAQAQTVGETPLGSPVERHLPMETPFAP
Ga0318562_1024470513300032008SoilVNGRRTVSRWLLGCLMLLAAGAQAQTVGESPLASAVERQLPMEQPFAPWARDPAQIR
Ga0318569_1002795123300032010SoilVSSMRKRGAWLLACLTLLAASAQAQTIGEAPLGSAIERQLPMQQTFAPWARDPEQI
Ga0318569_1015608813300032010SoilVSGMRKRSAWLLSWLTLLAVSAQAQTVGETPLGNPAERQLPVEQPAAWARDPEQIKHEAGDRFEPRQVFAESFETVKLK
Ga0310911_1057581613300032035SoilMSGLRKPGSWLLCCLMLMAASAQAQSVGETPLGSAVERQLPIDQPPASARDPEQ
Ga0310911_1065364113300032035SoilVSGMRKRSSWLLTCLTLVAVSAQAQTVGETSLGSAVERQLSIEQPAAWARDP
Ga0318558_1013430013300032044SoilVSGMRKRSAWLLSWLTLLAVSAQAQTVGETPLGNPAERQLPVEQPAAWARDPEQIKHEAGDRFEPRQVFAETFETVK
Ga0318506_1004530413300032052SoilVSGMRKRSAWLLSWLTLLAVSAQAQTVGETPLGNPAERQLPIEQP
Ga0318533_1041962133300032059SoilVSDLRRHGSWLLSCVTLVALSAQAQTVGETPLGSPVERHLPMETPFAPSA
Ga0318505_1045676713300032060SoilVSGLRRHGSWLLSCVTLVALSAQAQTVGETPLGSPVERHLPMETPFAPSARDPE
Ga0318510_1053896023300032064SoilVSDLRRHGSWLLSCVTLVALSAQAQTVGETPLGSPVERHLPMETPFAPSARDPEQIK
Ga0318524_1040813723300032067SoilVSDLRKHGSWLLSCVTLVALSAQAQTVGETPLGSPVERHLPMETPFAPSARDPEQIK
Ga0318524_1051742023300032067SoilVSGMRKRSAWLLSWLTLLAVSAQAQTVGETPLGNPAERQLPVEQPAAWARDPEQIKHEAGDRFEPRQVFAETFETVKLKNVIP
Ga0306924_1173370323300032076SoilVSDLRKHGSWLLSCVTLVALSAQAQTVGETPLGSPVERHLPMETPFAPSARDP
Ga0318525_1062995223300032089SoilVSGMRRRSVWFLTCLTLLAASAQAQTVGESTLGSAVERQLP
Ga0318577_1018976623300032091SoilVSGMRKRSAWLLSWLTLLAVSAQAQTVGETPLGSAVERQLPVEQPAAWARDPEQIKT
Ga0318540_1005694213300032094SoilVSGMRKRSAWLLSWLTLLAVSAQAQTVGETPLGSAVERQL
Ga0311301_1207288813300032160Peatlands SoilVIGTRNRSSWLLACLTLVAASAQAQSVGDASLGSTVERPLSTEQPLS
Ga0307470_1053661713300032174Hardwood Forest SoilVSGMRKPSSSLLACLMLVAASAQAQSVAESPLASAVERQLPVDQ
Ga0306920_10173890123300032261SoilVSSTRKRRFWLLASLTLVAASAQAQSVGDAPLGNDVERQLPVEQPAPWARDPGQIKTEAGDHLEKRKVPTESFETVKLKNVIPAIHFE
Ga0335069_1141640923300032893SoilVSGIRKRSAWLLSCLTLIAMSARAQSVGESPLGSAIERQLPMEQPFTPRARDPAQINTEAGDTLKPRPVLAESFETVKLKNVIPPIH
Ga0307510_1051215613300033180EctomycorrhizaVSGMRKRSAWLLGCLTLVAAGAQAQSVAESPLGSVVERQLPMEQPFAPWARDP
Ga0310914_1137302813300033289SoilVSSTRKRRFWLLASLTLVAASAQAQSVGDAPLGNDVERQLPVEQPAPWARDPGQIKTEAGDHLEKRKVPTESFETVKLKNVIPAIHF
Ga0318519_1002515413300033290SoilVSGMRKRSSWLLTCLTLVAVSAQAQTVGETSLGSAVERQLSIEQPAAWARDPEQIKTEAGDR
Ga0318519_1075088823300033290SoilVNGRRTVSRWLLGCLTLLAAGAQAQTVGESPLASAVERQLPMEQPFAPWARDPAQI


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