Metagenome / Metatranscriptome Family F061120

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F061120
Family Type	Metagenome / Metatranscriptome
Number of Sequences	132
Average Sequence Length	94 residues
Representative Sequence	MPRLLLLTGVILLMANYAFAQDSPDPTPMQCQLIRSAVAQYGFAAARQHALETYGPEAVKTGDKCFTKQEGRDTSSYAPTETEPPGGHSKPHRD
Number of Associated Samples	92
Number of Associated Scaffolds	132

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	73.08 %
% of genes near scaffold ends (potentially truncated)	36.36 %
% of genes from short scaffolds (< 2000 bps)	71.97 %
Associated GOLD sequencing projects	86
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.44

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (60.606 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (34.849 % of family members)
Environment Ontology (ENVO)	Unclassified (54.545 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (50.000 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 45.08% β-sheet: 0.00% Coil/Unstructured: 54.92%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.44
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.44
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 132 Family Scaffolds
PF04226	Transgly_assoc	5.30
PF05838	Glyco_hydro_108	3.79
PF13356	Arm-DNA-bind_3	1.52
PF00571	CBS	1.52
PF03330	DPBB_1	1.52
PF10686	YAcAr	1.52
PF03401	TctC	0.76
PF12071	DUF3551	0.76
PF00583	Acetyltransf_1	0.76
PF00903	Glyoxalase	0.76
PF07045	DUF1330	0.76
PF02586	SRAP	0.76
PF01471	PG_binding_1	0.76
PF03992	ABM	0.76
PF00313	CSD	0.76
PF03741	TerC	0.76
PF04828	GFA	0.76
PF13533	Biotin_lipoyl_2	0.76
PF13531	SBP_bac_11	0.76
PF07690	MFS_1	0.76
PF07813	LTXXQ	0.76
PF13237	Fer4_10	0.76

COG ID	Name	Functional Category	% Frequency in 132 Family Scaffolds
COG2261	Uncharacterized membrane protein YeaQ/YmgE, transglycosylase-associated protein family	General function prediction only [R]	5.30
COG3926	Lysozyme family protein	General function prediction only [R]	3.79
COG3678	Periplasmic chaperone Spy, Spy/CpxP family	Posttranslational modification, protein turnover, chaperones [O]	3.03
COG0861	Tellurite resistance membrane protein TerC	Inorganic ion transport and metabolism [P]	0.76
COG2135	ssDNA abasic site-binding protein YedK/HMCES, SRAP family	Replication, recombination and repair [L]	0.76
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	0.76
COG3791	Uncharacterized conserved protein	Function unknown [S]	0.76
COG5470	Uncharacterized conserved protein, DUF1330 family	Function unknown [S]	0.76

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.61 %
All Organisms	root	All Organisms	39.39 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.61 %
cellular organisms	root	All Organisms → cellular organisms	39.39 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.61 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	39.39 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.61 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	32.58 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.76 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.61 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	25.00 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.52 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.76 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.76 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.61 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	16.67 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1.52 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1.52 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.76 %
Candidatus Acidoferrales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales	0.76 %
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.61 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	9.09 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	2.27 %
Burkholderiales genera incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis	1.52 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.76 %
Elioraeaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Elioraeaceae	0.76 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	0.76 %
Cytophagia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia	0.76 %
Candidatus Acidoferrum	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.61 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	6.06 %
Aquabacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Aquabacterium	1.52 %
Afipia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia	1.52 %
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	1.52 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	0.76 %
Cytophagales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales	0.76 %
Elioraea	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Elioraeaceae → Elioraea	0.76 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.76 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.61 %
Bradyrhizobium japonicum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	3.79 %
Aquabacterium olei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Aquabacterium → Aquabacterium olei	1.52 %
unclassified Rhodoplanes	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes	1.52 %
Afipia felis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → Afipia felis	1.52 %
Bradyrhizobium macuxiense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium macuxiense	0.76 %
Hymenobacteraceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Hymenobacteraceae	0.76 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	0.76 %
Elioraea	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Elioraeaceae → Elioraea	0.76 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.76 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.61 %
Bradyrhizobium japonicum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	3.79 %
Rhodoplanes sp. JGI PP 4-B12	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. JGI PP 4-B12	1.52 %
Aquabacterium olei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Aquabacterium → Aquabacterium olei	1.52 %
Afipia felis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → Afipia felis	1.52 %
Hymenobacter	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Hymenobacteraceae → Hymenobacter	0.76 %
Bradyrhizobium macuxiense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium macuxiense	0.76 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	0.76 %
Elioraea	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Elioraeaceae → Elioraea	0.76 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.76 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	0.76 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000580\|AF_2010_repII_A01DRAFT_1003847	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2432	Open in IMG/M
3300003659\|JGI25404J52841_10044169	All Organisms → cellular organisms → Bacteria → Proteobacteria	941	Open in IMG/M
3300004633\|Ga0066395_10007686	All Organisms → cellular organisms → Bacteria → Proteobacteria	3858	Open in IMG/M
3300004633\|Ga0066395_10113835	All Organisms → cellular organisms → Bacteria → Proteobacteria	1323	Open in IMG/M
3300005332\|Ga0066388_101056725	Not Available	1368	Open in IMG/M
3300005332\|Ga0066388_101997455	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. JGI PP 4-B12	1039	Open in IMG/M
3300005332\|Ga0066388_103475254	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	804	Open in IMG/M
3300005363\|Ga0008090_14684031	Not Available	778	Open in IMG/M
3300005436\|Ga0070713_100063118	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Aquabacterium → Aquabacterium olei	3104	Open in IMG/M
3300005531\|Ga0070738_10000808	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	78741	Open in IMG/M
3300005764\|Ga0066903_100117182	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3683	Open in IMG/M
3300005764\|Ga0066903_103693393	Not Available	823	Open in IMG/M
3300006031\|Ga0066651_10152860	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1209	Open in IMG/M
3300006086\|Ga0075019_10735494	Not Available	625	Open in IMG/M
3300006175\|Ga0070712_100902616	Not Available	762	Open in IMG/M
3300009792\|Ga0126374_10015424	Not Available	3182	Open in IMG/M
3300010048\|Ga0126373_10031581	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4585	Open in IMG/M
3300010048\|Ga0126373_11748180	Not Available	686	Open in IMG/M
3300010360\|Ga0126372_10403798	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1248	Open in IMG/M
3300010361\|Ga0126378_10098246	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → Afipia felis	2883	Open in IMG/M
3300010361\|Ga0126378_13148351	Not Available	525	Open in IMG/M
3300010376\|Ga0126381_101707713	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	909	Open in IMG/M
3300010376\|Ga0126381_101783903	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	888	Open in IMG/M
3300012971\|Ga0126369_12808974	Not Available	570	Open in IMG/M
3300012971\|Ga0126369_12833525	Not Available	568	Open in IMG/M
3300014501\|Ga0182024_10887641	Not Available	1076	Open in IMG/M
3300016270\|Ga0182036_10996673	Not Available	690	Open in IMG/M
3300016294\|Ga0182041_10309870	Not Available	1312	Open in IMG/M
3300016294\|Ga0182041_10379701	Not Available	1196	Open in IMG/M
3300016294\|Ga0182041_12262451	Not Available	508	Open in IMG/M
3300016319\|Ga0182033_10603149	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	954	Open in IMG/M
3300016341\|Ga0182035_11526848	Not Available	601	Open in IMG/M
3300016341\|Ga0182035_11616815	Not Available	584	Open in IMG/M
3300016371\|Ga0182034_10469558	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1045	Open in IMG/M
3300016371\|Ga0182034_11216412	All Organisms → cellular organisms → Bacteria	656	Open in IMG/M
3300016387\|Ga0182040_11467987	Not Available	579	Open in IMG/M
3300017822\|Ga0187802_10003487	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Hymenobacteraceae → Hymenobacter	4591	Open in IMG/M
3300017822\|Ga0187802_10013139	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. JGI PP 4-B12	2722	Open in IMG/M
3300017822\|Ga0187802_10032515	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1857	Open in IMG/M
3300017822\|Ga0187802_10063743	Not Available	1360	Open in IMG/M
3300017822\|Ga0187802_10396265	Not Available	546	Open in IMG/M
3300017924\|Ga0187820_1216385	Not Available	603	Open in IMG/M
3300017933\|Ga0187801_10446814	Not Available	542	Open in IMG/M
3300017937\|Ga0187809_10095956	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Elioraeaceae → Elioraea	990	Open in IMG/M
3300017942\|Ga0187808_10607235	Not Available	508	Open in IMG/M
3300017955\|Ga0187817_10029953	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3289	Open in IMG/M
3300017961\|Ga0187778_10036870	Not Available	2987	Open in IMG/M
3300017970\|Ga0187783_10027844	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	4187	Open in IMG/M
3300017970\|Ga0187783_10034590	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	3743	Open in IMG/M
3300017970\|Ga0187783_10095319	Not Available	2193	Open in IMG/M
3300017970\|Ga0187783_10165674	Not Available	1627	Open in IMG/M
3300017994\|Ga0187822_10010875	Not Available	2176	Open in IMG/M
3300017995\|Ga0187816_10523859	Not Available	534	Open in IMG/M
3300018060\|Ga0187765_10015908	All Organisms → cellular organisms → Bacteria → Proteobacteria	3492	Open in IMG/M
3300020150\|Ga0187768_1129222	Not Available	580	Open in IMG/M
3300021477\|Ga0210398_10187345	Not Available	1686	Open in IMG/M
3300021560\|Ga0126371_10012641	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	7648	Open in IMG/M
3300021560\|Ga0126371_12171897	Not Available	670	Open in IMG/M
3300023255\|Ga0224547_1057716	Not Available	506	Open in IMG/M
3300024271\|Ga0224564_1119785	Not Available	539	Open in IMG/M
3300025928\|Ga0207700_10369605	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Aquabacterium → Aquabacterium olei	1252	Open in IMG/M
3300027043\|Ga0207800_1028716	Not Available	825	Open in IMG/M
3300027706\|Ga0209581_1000520	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	78798	Open in IMG/M
3300031057\|Ga0170834_100318712	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	665	Open in IMG/M
3300031474\|Ga0170818_114642560	All Organisms → cellular organisms → Bacteria	983	Open in IMG/M
3300031543\|Ga0318516_10035081	Not Available	2667	Open in IMG/M
3300031543\|Ga0318516_10081133	All Organisms → cellular organisms → Bacteria	1811	Open in IMG/M
3300031543\|Ga0318516_10410723	Not Available	779	Open in IMG/M
3300031544\|Ga0318534_10038453	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	2647	Open in IMG/M
3300031545\|Ga0318541_10046735	Not Available	2208	Open in IMG/M
3300031545\|Ga0318541_10467810	Not Available	705	Open in IMG/M
3300031545\|Ga0318541_10630261	Not Available	599	Open in IMG/M
3300031545\|Ga0318541_10798416	Not Available	526	Open in IMG/M
3300031546\|Ga0318538_10432526	All Organisms → cellular organisms → Bacteria	712	Open in IMG/M
3300031564\|Ga0318573_10007101	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	4547	Open in IMG/M
3300031572\|Ga0318515_10373829	Not Available	763	Open in IMG/M
3300031573\|Ga0310915_10674512	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	730	Open in IMG/M
3300031668\|Ga0318542_10035555	Not Available	2178	Open in IMG/M
3300031680\|Ga0318574_10389782	Not Available	813	Open in IMG/M
3300031682\|Ga0318560_10048933	All Organisms → cellular organisms → Bacteria → Proteobacteria	2076	Open in IMG/M
3300031708\|Ga0310686_108149581	Not Available	849	Open in IMG/M
3300031708\|Ga0310686_119470913	All Organisms → cellular organisms → Bacteria	2670	Open in IMG/M
3300031713\|Ga0318496_10025686	All Organisms → cellular organisms → Bacteria → Proteobacteria	2946	Open in IMG/M
3300031713\|Ga0318496_10679983	Not Available	568	Open in IMG/M
3300031719\|Ga0306917_10097021	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2106	Open in IMG/M
3300031719\|Ga0306917_10658122	Not Available	823	Open in IMG/M
3300031723\|Ga0318493_10704115	Not Available	566	Open in IMG/M
3300031736\|Ga0318501_10128259	Not Available	1289	Open in IMG/M
3300031736\|Ga0318501_10366863	Not Available	775	Open in IMG/M
3300031744\|Ga0306918_10272297	Not Available	1297	Open in IMG/M
3300031747\|Ga0318502_10443252	Not Available	775	Open in IMG/M
3300031751\|Ga0318494_10807354	Not Available	550	Open in IMG/M
3300031771\|Ga0318546_10195519	Not Available	1380	Open in IMG/M
3300031771\|Ga0318546_10524387	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	832	Open in IMG/M
3300031777\|Ga0318543_10092306	Not Available	1293	Open in IMG/M
3300031781\|Ga0318547_10278981	Not Available	1012	Open in IMG/M
3300031792\|Ga0318529_10118250	Not Available	1205	Open in IMG/M
3300031796\|Ga0318576_10011397	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → Afipia felis	3290	Open in IMG/M
3300031797\|Ga0318550_10312217	Not Available	763	Open in IMG/M
3300031805\|Ga0318497_10405233	Not Available	763	Open in IMG/M
3300031833\|Ga0310917_10863743	Not Available	609	Open in IMG/M
3300031879\|Ga0306919_10100248	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium macuxiense	2036	Open in IMG/M
3300031879\|Ga0306919_11101014	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	605	Open in IMG/M
3300031879\|Ga0306919_11191780	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	579	Open in IMG/M
3300031894\|Ga0318522_10048335	Not Available	1496	Open in IMG/M
3300031896\|Ga0318551_10771179	Not Available	558	Open in IMG/M
3300031897\|Ga0318520_10051877	Not Available	2158	Open in IMG/M
3300031910\|Ga0306923_10552474	All Organisms → cellular organisms → Bacteria	1297	Open in IMG/M
3300031910\|Ga0306923_10715262	Not Available	1113	Open in IMG/M
3300031912\|Ga0306921_10830387	Not Available	1053	Open in IMG/M
3300031941\|Ga0310912_10177088	All Organisms → cellular organisms → Bacteria	1622	Open in IMG/M
3300031942\|Ga0310916_10170082	Not Available	1809	Open in IMG/M
3300031942\|Ga0310916_11419397	Not Available	568	Open in IMG/M
3300031945\|Ga0310913_10221415	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1325	Open in IMG/M
3300031946\|Ga0310910_10277278	Not Available	1315	Open in IMG/M
3300031947\|Ga0310909_10495720	Not Available	1024	Open in IMG/M
3300031954\|Ga0306926_11972379	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	657	Open in IMG/M
3300031954\|Ga0306926_12536910	Not Available	561	Open in IMG/M
3300031954\|Ga0306926_12794292	Not Available	527	Open in IMG/M
3300032001\|Ga0306922_10194824	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2174	Open in IMG/M
3300032001\|Ga0306922_11428637	Not Available	694	Open in IMG/M
3300032041\|Ga0318549_10004420	All Organisms → cellular organisms → Bacteria → Proteobacteria	4452	Open in IMG/M
3300032043\|Ga0318556_10134214	Not Available	1272	Open in IMG/M
3300032054\|Ga0318570_10088810	Not Available	1338	Open in IMG/M
3300032068\|Ga0318553_10771995	Not Available	503	Open in IMG/M
3300032076\|Ga0306924_10277266	Not Available	1925	Open in IMG/M
3300032089\|Ga0318525_10429134	Not Available	677	Open in IMG/M
3300032261\|Ga0306920_100197947	Not Available	2998	Open in IMG/M
3300032261\|Ga0306920_103972589	Not Available	537	Open in IMG/M
3300032892\|Ga0335081_10000435	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	74261	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.24%
Host-Associated	Host-Associated	0.76%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	88.64%
Aquatic	Environmental → Aquatic	10.61%
Plants	Host-Associated → Plants	0.76%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	87.88%
Freshwater	Environmental → Aquatic → Freshwater	9.85%
Sediment	Environmental → Aquatic → Sediment	0.76%
Peat	Environmental → Terrestrial → Peat	0.76%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	72.73%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	9.85%
Loam	Environmental → Terrestrial → Soil → Loam	8.33%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	6.82%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.76%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.76%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.76%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	57.58%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	13.64%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	9.85%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	6.06%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.06%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.27%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.76%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.76%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.76%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.76%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.76%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.76%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	34.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	20.45%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	9.85%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	9.85%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	6.06%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	5.30%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.27%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.27%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.27%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.52%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.76%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.76%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.76%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.76%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.76%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.76%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000580	Forest soil microbial communities from Amazon forest - 2010 replicate II A01	Environmental	Open in IMG/M
3300003659	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1	Host-Associated	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005531	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen12_06102014_R2	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006086	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017924	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_5	Environmental	Open in IMG/M
3300017933	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1	Environmental	Open in IMG/M
3300017937	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_4	Environmental	Open in IMG/M
3300017942	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017994	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_2	Environmental	Open in IMG/M
3300017995	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300020150	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP10_20_MG	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300023255	Peat soil microbial communities from Stordalen Mire, Sweden - 717 P2 10-14	Environmental	Open in IMG/M
3300024271	Soil microbial communities from Bohemian Forest, Czech Republic ? CSU5	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300027043	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 11 (SPAdes)	Environmental	Open in IMG/M
3300027706	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen15_06102014_R2 (SPAdes)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031894	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032089	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AF_2010_repII_A01DRAFT_10038472	3300000580	Forest Soil	MPRLLLLTGVILPMANYAFAQNSPDPTPMQCQLIRSAVAQYGFAAARQHALETYGPEAVKTGDKCFTKQEGRDTSSYAPAETEPPGKQQQQSK*
JGI25404J52841_100441692	3300003659	Tabebuia Heterophylla Rhizosphere	MPRLLLLTGVILLTADYSFAQYSPDPTPMQCQLIRLAVAQYGFAAARQHALETYGPEAVKTGDKCFAKGRARHYAPTETEPAQKGRILAAPTNTAK*
Ga0066395_100076866	3300004633	Tropical Forest Soil	MPRLLLLTGVILPMANYAFAQDSPDPTPMQCQLIRSAVAQYGFAAARQHALETYGPEAVKTGDKCFTKQEGRDTSSYAPAETEPPGKQQQQSK*
Ga0066395_101138353	3300004633	Tropical Forest Soil	MRSENEQHAIATPRILLLSGVILLMPDYSLAQSYPDPTPMQCQLIRWAAAQYGFAAARQHALETYGPEAVKTGDKCFTQQTGRGISSHASAIGIERNAGVK*
Ga0066388_1010567253	3300005332	Tropical Forest Soil	MIEFSEVLLENWRRTAAMPRLLLLTGVILLMADYAFAQDATDPTPMQCQLIRLAVAQYGFAAARQHALETYGPEAVKTGDKCFTKQEGRDTSSYAPTETEPPRGKPHRD*
Ga0066388_1019974551	3300005332	Tropical Forest Soil	MPKLLLLTGVILLMADYAFAQNSPDPTPMQCQLIRSAVAQYGFAAARRHALETYGPEAVKTGDKCFTKQEGRDTSSYAPIETEPPGRQQQQSK*
Ga0066388_1034752542	3300005332	Tropical Forest Soil	MARFLVLAFVVLLMPDYSLAQSSPDPSPMQCQLIKQAVAQYGFAAARRHALETYGPEAVKTGDKCFTKQTGRGSSADAAAARVDRSAGVK*
Ga0008090_146840313	3300005363	Tropical Rainforest Soil	MPLLLLTGVILLMANYAFAQSSPDPTPMQCQLIRWAVAQYGFAAARQHALETYGPEAVKTGDKCFTKQEGRDTSSYAPTETEPPLGRSKPHRD*
Ga0070713_1000631183	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MPRFLFLTAVILLMAHYSLAQDYSPEPSPMQCQLIKQAVAQYGYAASRRHALETYGPQAVKTGDKCFAKRTGRGVSSGIERSAAAK*
Ga0070738_1000080863	3300005531	Surface Soil	MPRFVLLVGAILLMPGYSSAQDSPDPSAMQCQMIRLAVAQYGYAAARRHALETYGPEAVKVGDKCFAKQIGHGIGGNGPPAFGDERSARAR*
Ga0066903_1001171822	3300005764	Tropical Forest Soil	MARFLVLAFVVLLMPDYSLAQSSLDPSPMQCQLIKQAVAQYGFAAARRHALETYGPEAVKTGDKCFTKQTGRGSRPDAPAAARVDRSAGVK*
Ga0066903_1036933933	3300005764	Tropical Forest Soil	TGVILPMANYAFAQDSRDPTPMQCQLIRSAVAQYGFAAARQHALETYGPEAVKTGDKCFTKQEGRDTSSYAPTEMEPPGGHSKPHRD*
Ga0066651_101528602	3300006031	Soil	MLRILLLTGVILLAANHSFAQNSPDPSPMQCQLIRQAAAQYGFAASRRHALETYGPEAVKTGDKCFTKGTGRDTLSKAAGAERSAGMK*
Ga0075019_107354942	3300006086	Watersheds	MPRLLLLTGVILLMADYAFAQYSPDPTPMQCQLIRLAVAQYGFAAAWRHALETYGPEAVKTGDKCFAKRTGQDNTSSNVPTALGAERSAGVK*
Ga0070712_1009026162	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MPRFLLLTGIVLLMADYSFAQSAPDPTPMQCQLIRLAVAQYGFAAARRHALETYGPEAVKTGDKCFTKQTRRGSSEDVPTAGVERGAREK*
Ga0126374_100154241	3300009792	Tropical Forest Soil	MPRLLLLTGVILPMANYAFAQDSPDPTPMQCQLIRSAVAQYGFAAARQHALETYGPEAVKTGDKCFTKQEGRDTSSDAATQTEPPGGHSKPHRD*
Ga0126374_101876603	3300009792	Tropical Forest Soil	LLMPDYSLAQSYPDPTPMQCQLIRWAAAQYGFAAARQHALETYGPEAVKTGDKCFTQQTGRGISSHASAIGIERNAGVK*
Ga0126373_100315816	3300010048	Tropical Forest Soil	MRSENDQHAIATPRILLLSGVILLMPDYSLAQSYPDPTPMQCQLIRWAAAQYGFAAARQHALETYGPEAVKTGDKCFTQQTGRGISSHASAIGIERNAGVK*
Ga0126373_117481801	3300010048	Tropical Forest Soil	MIEFSEVLLENWRRTAAMPRLLLLTGVILLMADYAFAQDATDPTPMQCQQIRWAVAQYGFAAARQHALETYGPEAVKTGDKCFTEQERRDTGSYPPNPRSQSKPHRD*
Ga0126372_104037982	3300010360	Tropical Forest Soil	MPRLLLLTGVILLMADYAFAQDATDPTPMQCQLIRLAVAQYGFAAARQHALETYGPEAVKTGDKCFTKQEGRDTSSYAPTETEPPRGHSKPPHRD*
Ga0126378_100982461	3300010361	Tropical Forest Soil	ANYAFAQDSPDPTPMQCQLIRSAVAQYGFAAARQHALETYGTEAVKTGDKCFTKQEGRDTSSDAATQTEPPGGHSKPHRD*
Ga0126378_131483512	3300010361	Tropical Forest Soil	MARFLVLAFVVLLMPDYSLAQSSPDPSPMQCQLIKQAVAQYGFAAARRHALETYGPEAVKTGDKCFTKQTGRGSSSHAPAAARVDRSAGVK*
Ga0126381_1017077131	3300010376	Tropical Forest Soil	MPRLLLLTGVILRMADYAFAQDATDPTPMQCQLIRLAVAQYGFAAARQHALETYGPEAVKTGDKCFTKQEGRDTSSYAPTETEPPRGKPHRD*
Ga0126381_1017839032	3300010376	Tropical Forest Soil	MPRLLLLTGVILLMADYAFAQDATDPTPMQCQLIRLAVAQYGFAAARQHALETYGPEAVKTGDKCFTKQEGRDTSSHAPTEAEPPRDHSKPPHRD*
Ga0126369_128089741	3300012971	Tropical Forest Soil	MARFLVLAFVVLLMPDYSLAQSSLDPSPMQCQLIKQAVAQYGFAAARRHALETYGPEAVKTGDKCFTKQTGRGGSSDAPAAARVDRSAGVK*
Ga0126369_128335251	3300012971	Tropical Forest Soil	MIEFSEVLLENWRRTAAMPRLLLLTGVILLMADYAFAQDATDPTPMQCQLIRLAVAQYGFAAARQHALETYGPEAVKTGDKCFTKQEGRDTSSYAPAETEPPRAHSKPHRDQHAQAHFIRRTRPQWHHLLTS*
Ga0182024_108876412	3300014501	Permafrost	MVRFLLLIGFSLLMTAYSFAQDSPDPTPIQCHLIRLAVAQYGLAAARQHALETYGPEAVKTGDKCFTNETVSGTSSQVPRELGVEDSAAMK*
Ga0182036_109966733	3300016270	Soil	MPRLLLLTCVILPMANYAFAQYSPDPTPMQCQLIRLAVAQYGFAAARQHALETYGPEAVKTGDKCFTKQEGRDTSSYAPTETEPPGR
Ga0182041_103098703	3300016294	Soil	MPRLLLLTGVILPMANYAFAQNSPDPTPMQCQLIRSAVAQYGFAAARQHALETYGPEAVKTGDKCFTKQEGRDTSS
Ga0182041_103797011	3300016294	Soil	MPRLLLLTGVILLMANYAFAQDSPDPTPMQCQLIRSAVAQYGFAAAMQHALETYGPEAVKTGDKCFTKQEGRDTSSYAPTETE
Ga0182041_122624511	3300016294	Soil	RLSSPEILLGNWRRTTAMPRLLLLTGVILPMANYAFAQDSRDPTPMQCQLIRSAVAQYGFAAARQHALETYGPEAVKTGDKCFTKQEGRDTSSYAPAETEPPGKQQQQSNR
Ga0182033_106031493	3300016319	Soil	CCGTAYGMIEFSEVLLENWRRTAAMPRLLLLTGVILLMADYAFAQDATDPTPMQCQLIRLAVAQYGFAAARQHALETYGPEAVKTGDKCFTKQEGRDTSSYAPTETEPPRGKPHRD
Ga0182035_115268482	3300016341	Soil	MPRLLLLTGVILPMANCAFAQQSPDPTPMQCQLIRSAAAQYGFAGARQYALETYGPEAVKTGDKCFTKQEERDTSS
Ga0182035_116168151	3300016341	Soil	SPEILLGNWRRTTAMPRLLLLTGVILLMANYAFAQDSPDPTPMQCQLIRSAVAQYGFAAAMQHALETYGPEAVKTGDKCFTKQEGRDTSSYAPTETEPPGGHASPTAINTSNRFVVTDSAGARL
Ga0182034_104695581	3300016371	Soil	MIEFSEVLLENWRRTAAMPRLLLLTGVILLMADYAFAQDATDPTPMQCQLIRLAVAQYGFAAARQHALETYGPEAVKTGDKCFTKQEGRDTSSYAPTETEPPRGKPH
Ga0182034_112164122	3300016371	Soil	ILLMANYAFAQDSPDPTPMQCQLIRSAVAQYGFAAAMQHALETYGPEAVKTGDKCFTKQEGRDTSSYAPTETEPPGGHASPTAINTSNRFVVTDSAGARL
Ga0182040_114679873	3300016387	Soil	MPRLLLLTCVILPMANYAFAQYSPDPTPMQCQLIRLAVAQYGFAAARQHALETYGPEAVKTGDKCFTKQEGRDTSSYAPTETEPRAEKAGH
Ga0187802_100034872	3300017822	Freshwater Sediment	MPRLLLLTGFVLLIANSSFAQSGDPTPSQCLLVRQAVAQYGFAAARRYALEHYGAEAVKTGDKCFTKQAARGSRSY
Ga0187802_100131393	3300017822	Freshwater Sediment	MPRLLLLTGVVLLIANYCFAQDYSPDPTPTQCLLIRQAVAQYGFAAARQHALETYGPEAVKTGDKCFTKQTERGTGSYEPTSLGVERGVGTK
Ga0187802_100325154	3300017822	Freshwater Sediment	MPRFVLLTCVVLLIADYSFAQDSPEPTPMQCLLIKQAVAQYGFAAARQHALKTYGPEAAKTGDKCFTKQTERGTGSDEPTGLGVERGAGMK
Ga0187802_100637431	3300017822	Freshwater Sediment	MPRLLLLTGVVLLMADYSFAQDSPDPTPTQCQLIRLAVAQYGFAAARRHALETYGPEAVKTGDKCFTKQSGRGTSSYVPTALGVEQGAGVK
Ga0187802_103962651	3300017822	Freshwater Sediment	GRVPVLYLLEPSKQRGTVMPRFLLGIVLLMADYSLAQDSADPTPMQCQLIKLAVAQYGFAVARRHALETYGPEAVKTGDKCFTKQKERGTGSPTPLGVERSTGEK
Ga0187820_12050231	3300017924	Freshwater Sediment	MLRLLLLTGVVLLIADYCFAQDHSPDPTPMQCLLIREAVAQYGFAAARQHALETYGPEAVKTGDKCFAQQTERGS
Ga0187820_12163851	3300017924	Freshwater Sediment	TLSGPAKKKRDRVVLLIADNCFAQNNFQCLLIRQAVAQYGFAAARQHALETYGPEAVKTGDKCFTKQTERGTGSYEPTSLDVQRGEGTK
Ga0187801_104468141	3300017933	Freshwater Sediment	MPRFVLLTCVVLLIADYSFAQDSPEPTPMQCLLIKQAVAQYGFAAARQHALETYGPEAAKTGDKCFTKQTERGTGSDEPTGLGVERGAGMK
Ga0187809_100959561	3300017937	Freshwater Sediment	MPRLLLLTGVVLLMADYSFAQDSPDPTPTQCQLIRLEVAQYGFAAARRHALETYGPEAVKTGDKCFTKQSGRGTSSYVPTALGVEQGAGVK
Ga0187808_106072351	3300017942	Freshwater Sediment	MPRLLLLTGVVLLMADYSFAQDSPDPTPTQCQLIRLEVAQYGFAAARRYALETYGPEAVKTGDKCFTKQSGRGTSSYVPTALGVEQGAGVK
Ga0187817_100299536	3300017955	Freshwater Sediment	MPRLLLLTGVVLLIADYCFAQDSPDPTPMQCQLIRQAVAQYGFDAARQHALETYGPEAVKTGDKCFTKRTERDTSSHEPTALSVERGAGAK
Ga0187778_100368704	3300017961	Tropical Peatland	MSRLLLLTGVVLLIADYCFAQDSPDPTPMQCQLIRQAVAQYGFAAARQHALETYGPEAVKTGDKCFTKQTQRDTSSHEPTALSVERGAAAK
Ga0187783_100278448	3300017970	Tropical Peatland	MAKLLLLPGVVLLIADHAFAQEPTASQCLLVRQAVAQYGFAAARRYALEHYGPEAVKTGDKCFTKQAARGARSY
Ga0187783_100345904	3300017970	Tropical Peatland	MPRSLLLTGVVLLIANSSFAQSGDPTPSQCLLVRQAVAQYGFAAARRYALEHYGAEAVKTGDKCFTKQAARGSRSY
Ga0187783_100953194	3300017970	Tropical Peatland	MPRLLLLTGVALLIADYCFAQDNSPDPTPMQCLLIRQAVAQYGFAAARQHALETYGPEAVKTGDKCFTKETERGTGSYEPTSLGVHRGVGVK
Ga0187783_101656742	3300017970	Tropical Peatland	MSRLLLLTGVVLLIADSSFAQNSPDPTPTQCLLIRQAVAQYGFAAARKHALETYGPEALKTGDKCFTKETAGGTSSYEPTAFDAEHRTGTK
Ga0187822_100108751	3300017994	Freshwater Sediment	MPRLLLLTGVVLLIANYCFAQDYSPDPTPTQCLLIRQAVAQYGFAAARQHALETYGPEAVKTGDKCFTKQTERGTGSYEPTSLDVQRGEGTK
Ga0187816_105238591	3300017995	Freshwater Sediment	MPRFLLLSGIVLLMADYSLAQDSADPTPMQCQLIKLAVAQYGFAVARRHALETYGPEAVKTGNKCFTKQKERGTGSPTPLGVERSTGEK
Ga0187765_100159082	3300018060	Tropical Peatland	MPRFLFLTGVALLMADYSFAQDSPDPTPTQCQLLRLAVAQYGFAAARRHALETYGPEAVKTGDKCFTKQTGPGASYVPTALGAESSAEKK
Ga0187768_11292222	3300020150	Tropical Peatland	RLLLLTGVVLLIADYCFAQDSPDPTPMQCQLIRQAVAQYGFAAARQHALETYGPEAVKTGDKCFTKQTQRDTSSHEPTALSVERGAAAK
Ga0210398_101873454	3300021477	Soil	MMRFVLLIGFGLLMTDYSLAQDSQDPTPMQCHLIKLAVAQYGYAAARQHALETYGPEAVKTGDKCFTNETGSGTGSQAPKELGVQGSAGMK
Ga0126371_100126414	3300021560	Tropical Forest Soil	MRSENEQHAIATPRILLLSGVILLMPDYSLAQSYPDPTPMQCQLIRWAAAQYGFAAARQHALETYGPEAVKTGDKCFTQQTGRGISSHASAIGIERNAGVK
Ga0126371_121718972	3300021560	Tropical Forest Soil	MARFLVLAFVVLLMPDYYLAQSSPDPSPMQCQLIKQAVAQYGFAAARRHALETYGPEAVKTGDKCFTKQTGRGSSSDAPAAARVDRSAGVK
Ga0224547_10577162	3300023255	Soil	MVRFLLLIGFSLLMTAYSFAQDSPDPTPIQCHLIRLAVAQYGLAAARQHALETYGPEAVKTGDKCFTNETVSGTSSQ
Ga0224564_11197851	3300024271	Soil	MPRLLLLTAVVLLIADYSFAQDSPDPTPMQCQLIRQAVAQYGFAAARQHALETYGPEAVKTGDKCFTKQTERGTGSYEPTALGVEHGAGTKERQ
Ga0207700_103696051	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MPRFLFLTAVILLMAHYSLAQDYSPEPSPMQCQLIKQAVAQYGYAASRRHALETYGPQAVKTGDKCFAKRTGRGVSSGIERSAAAK
Ga0207800_10287161	3300027043	Tropical Forest Soil	MPRLLLLTGVILPMANYAFAQQSPDPTPMQCQLIRSAVAQYGFAAARQHALETYGPEAVKTGDKCFTKQTKRGTSSYEPTAFDAERRAGAK
Ga0209581_100052061	3300027706	Surface Soil	MPRFVLLVGAILLMPGYSSAQDSPDPSAMQCQMIRLAVAQYGYAAARRHALETYGPEAVKVGDKCFAKQIGHGIGGNGPPAFGDERSARAR
Ga0170834_1003187122	3300031057	Forest Soil	MPRFLLLTGVILLMADYAFAQYSPDPTPMQCQLIRLAVAQYGFAAARRHALETYGPEAVTTGDKCFTKQTGRGTSSYAPTALGIERSAG
Ga0170818_1146425602	3300031474	Forest Soil	MPRFLLLTGVILLMADYAFAQYSPDPTPMQCQMIRLAVAQYGYSASRRHALETYGPEAVKTGDKCFTKRTGRGTGSNGPTALGVERSAGAK
Ga0318516_100350812	3300031543	Soil	MPRLLLLTGVILPMANYAFAQDSRDPTPMQCQLIRSAVAQYGFAAARQHALETYGTEAVKTGDKCFTKQEGRDTSSDAATQTEPPGGHSKPHRD
Ga0318516_100811333	3300031543	Soil	MPRLLLLTGVYLLMANYAFAQDSPDPTPMQCQLIRSAVAQYGFAAAMQHALETYGPEAVKTGDKCFTKQEGRDTSSYAPTETEPPGGHASPTAINTSNRFVVTDSAGARL
Ga0318516_104107231	3300031543	Soil	LEILLGNWRRTTAMPRLLLLTGVILPMANYAFAQDSRDPTPMQCQLIRSAVAQYGFAAARQHALETYGPEAVKTGDKCFTKQEGRDTSSYAPAETEPPGKQQQQSNR
Ga0318534_100384535	3300031544	Soil	MPRLLLLTGVILPMANYAFAQDSRDPTPMQCQLIRSAVAQYGFAAARQHALETYGPEAVKTGDKCFTKQEGRDTSSYAPAETEPPGKQQQQSK
Ga0318541_100467352	3300031545	Soil	MPRLLLLTGVILPMANYAFAQDSRDPTPMQCQLIRSAVAQYGFAAARQHALETYGPEAVKTGDKCFTKQEGRDTSSYAPAETEPPGKQQQQSNR
Ga0318541_104678101	3300031545	Soil	MIEFSEVLLENWRRTAAMPRLLLLTGVILLMADYAFAQDATDPTPMQCQLIRLAVAQYGFAAARQHALETYGPEAVKTGDKCFTKQEGRDTSSYAPTETEPPRGKPHRD
Ga0318541_106302612	3300031545	Soil	MPRLLLLTGVYLLMANYAFAQDSPDPTPMQCQLIRSAVAQYGFAAARQHALETYGPEAVKTGDKCFTKQEERDTSSYAPTETEPPGGHSRPHRD
Ga0318541_107984161	3300031545	Soil	MPRLLLLTGVILPMANYAFAQDSPDPTPMQCQLIRSAVAQYGFAAARQHALETYGTEAVKTGDKCFTKQEGRDTSSDAATQTEPPGGHSKPHRD
Ga0318538_104325261	3300031546	Soil	LGNWRRTTAMPRLLLLTGVILLMANYAFAQDSPDPTPMQCQLIRSAVAQYGFAAAMQHALETYGPEAVKTGDKCFTKQEGRDTSSYAPTETEPPGGHSKPHRD
Ga0318573_100071018	3300031564	Soil	MPRLLLLTGVILPMANYAFAQDSPDPTPMQCQLIRSAVAQYGFAAARQHALETYGPEAVKTGDKCFTKQEGRDTSSDAATQTEPPGGHSKPHRD
Ga0318515_103738291	3300031572	Soil	MPRLLLLTGVILPMANYAFAQDSRDPTPMHCQLIRSAVAQYGFAAARQHALETYGPEAVKTGDKCFTKQEGRDTSSDAATQTEPPGGHSKPHRD
Ga0310915_106745121	3300031573	Soil	DYAFAQDATDPTPMQCQLIRLAVAQYGFAAARQHALETYGPEAVKIGDKCFTKQEGRDTSSYAPTETEPPRGKPHRD
Ga0318542_100355554	3300031668	Soil	MPRLLLLTGVILPMANYAFAQDSRDPTPMQCQLIRSAVAQYGFAAARQHALETYGTEAVKTGDKCFTKQEGRDTSSDPATQTEPPGGHSKPHCD
Ga0318574_103897821	3300031680	Soil	AAEHHAARLSSPEILLGNWRRTTAMPRLLLLTGVILPMANYAFAQDSRDPTPMQCQLIRSAVAQYGFAAARQHALETYGPEAVKTGDKCFTKQEGRDTSSYAPAETEPPGKQQQQSNR
Ga0318560_100489331	3300031682	Soil	MPRLLLLTGVILPMANYAFAQDSRDPTPMQCQLIRSAVAQYGFAAARQHALETYGPEAVKTGDKCFTKQEGRDTSSDAATQTE
Ga0310686_1081495811	3300031708	Soil	MMRFLLLIGFGLLMTDYSLAQDAPDPTPMQCHLITLAVAQYGYAAARQHALETYGPEAVKTGDKCFTNETVSGTGSQVPKELGVAGSAGTK
Ga0310686_1194709132	3300031708	Soil	MPRLLLLTGVVLLIADYCFAQDYSPDPTPMQCLLIRQAVAQYGFAAARQHALETYGPEAVKTGDKCFTKQTERDTSSHEPTSLGVEHGVGAK
Ga0318496_100256866	3300031713	Soil	MPRLLLLTGVFLPMANYAFAQDSRDPTPMQCQLIRSAVAQYGFAAARQHALETYGPEAVKTGDKCFTKQEGRDTSSYAPAETEPPGKQQQQSK
Ga0318496_106799831	3300031713	Soil	NWRRTAAMPRLLLLTGVILLMADYAFAQDATDPTPMQCQLIRLAVAQYGFAAARQHALETYGPEAVKIGDKCFTKQEGRDTSSYAPTETEPPRGKPHRD
Ga0306917_100970212	3300031719	Soil	MPRLLLLTGVILLMADYAFAQDATDPTPMQCQLIRLAVAQYGFAAARQHALETYGPEAVKTGDKCFTKQEGRDTSSYAPTETEPPRGKPHRD
Ga0306917_106581222	3300031719	Soil	MPRLLLLTGVILPMANYAFAQDSRDPTPMQCQLIRSAVAQYGFAAARQHALETYGPEAVKTGDKCFTKQEGRDTSSDAATQTEPPGGHSKPHRD
Ga0318493_107041151	3300031723	Soil	MYAAEHYAARLSSPEILLGNWRRTTAMPRLLLLTGVILPMANYAFAQDSRDPTPMQCQLIRSAVAQYGFAAARQHALETYGPEAVKTGDKCFTKQEGRDTSSDAATQTEPPGGHSKPHRD
Ga0318501_101282592	3300031736	Soil	MPRLLLLTGVISPMANYAFAQDSPDPTPMQCQLIRSAVAQYGFAAARQHALETYGPEAVKTGDKCFTKQEGRDTSSDAATQTEPPGGHSKPHRD
Ga0318501_103668631	3300031736	Soil	MPRLLLLTGVILLMANYAFAQDSPDPTPMQCQLIRSAVAQYGFAAAMQHALETYGPEAVKTGDKCFTKQEGRDTSSYAPTETEPPGGHSKPHRD
Ga0306918_102722971	3300031744	Soil	MPRLLLLTGVILPMANYAFAQDSPDPTPMQCQLIRSAVAQYGFAAARQHALETYGTEAVKTGDKCFTKQEGRDTSSDAATQTEPPGGHIKPHR
Ga0318502_104432521	3300031747	Soil	AEHYAARLSSPEILLGNWRRTTAMPRLLLLTGVILPMANYAFAQDSRDPTPMQCQLIRSAVAQYGFAAARQHALETYGPEAVKTGDKCFTKQEGRDTSSYAPTETEPPGGHSKPHRD
Ga0318494_108073542	3300031751	Soil	MANYAFAQDSPDPTPMQCQLIRSAVAQYGFAAARQHALETYGPEAVKTGDKCFTKQEERDTSSYAPTETEPPGGHSKPHRD
Ga0318546_101955191	3300031771	Soil	MPRLLLLTGVILLMANYAFAQDSPDPTPMQCQLIRSAVAQYGFAAAMQHALETYGPEAVKTGDKCFTKQEGRDTSSYAPTETEPPGGHASPTAINTSNRFVVTDSAGARL
Ga0318546_105243871	3300031771	Soil	DYAFAQDATDPTPMQCQLIRLAVAQYGFAAARQHALETYGPEAVKTGDKCFTKQEGRDTSSYAPTETEPPRSKPHRD
Ga0318543_100923062	3300031777	Soil	MIEFSEVLLENWRRTAAMPRLLLLSGVILLMADYAFAQDATDPAPMQCQLIRLAVAQYGFAAARQHALETYGPEAVKIGDKCFTKQEGRDTSSYAPTETEPPRGKPHRD
Ga0318547_102789813	3300031781	Soil	MIEFSEVLLENWRRTAAMPRLLLLTGVILLMADYAFAQDATDPTPMQCQLIRLAVAQYGFAAARQHALETYGPEAVKIGDKCFTKQEGRDTSSYAPTETEPPRGKPHRD
Ga0318529_101182501	3300031792	Soil	TTAMPRLLLLTGVFLPMANYAFAQDSRDPTPMQCQLIRSAVAQYGFAAARQHALETYGPEAVKTGDKCFTKQEGRDTSSYAPAETEPPGKQQQQSK
Ga0318576_100113971	3300031796	Soil	GVILPMANYAFAQDSPDPTPMQCQLIRSAVAQYGFAAARQHALETYGPEAVKTGDKCFTKQEGRDTSSDAATQTEPPGGHSKPHRD
Ga0318550_103122171	3300031797	Soil	MIEFSEVLLENWRRTAAMPRLLLLTGVILLMADYAFAQDATDPTPMQCQLIRLAVAQYGFAAARQHALETYGPEAVKTGDKCFTKQEGRDTSSYAPTETEPPRGKP
Ga0318497_104052331	3300031805	Soil	MANYAFAQDSRDPTPMQCQLIRSAVAQYGFAAARQHALETYGPEAVKTGDKCFTKQEGRDTSSYAPAETEPPGKQQQQSK
Ga0310917_108637432	3300031833	Soil	RLLLLTGVYLLMANYAFAQDSPDPTPMQCQLIRSAVAQYGFAAARQHALETYGPEAVKTGDKCFTKQEERDTSSYAPTETEPPGGHSRPHRD
Ga0306919_101002482	3300031879	Soil	MPRLLLLTCVILPMANYAFAQYSPDPTPMQCQLIRLAVAQYGFAAARQHALETYGPEAVKTGDKCFTKQEGRDTSSYAPTETEPPGRQQQQSK
Ga0306919_111010142	3300031879	Soil	TGVILLMANYAFAQDSPDPTPMQCQLIRSAVAQYGFAAAMQHALETYGPEAVKTGDKCFTKQEGRDTSSYAPTETEPPGGHASPTAINTSNRFVVTDSAGARL
Ga0306919_111917801	3300031879	Soil	LLMADYAFAQDATDPTPMQCQLIRLAVAQYGFAAARQHALETYGPEAVKTGDKCFTKQEGRDTSSYAPTETEPPRSKPHRD
Ga0318522_100483351	3300031894	Soil	SSPEILLGNWRRTTAMPRLLLLTGVILPMANYAFAQDSRDPTPMQCQLIRSAVAQYGFAAARQHALETYGPEAVKTGDKCFTKQEGRDTSSYAPAETEPPGKQQQQSK
Ga0318551_107711791	3300031896	Soil	TSNCVILLMANYAFAQDSPDPTPMQCQLIRSAVAQYGFAAAMQHALETYGPEAVKTGDKCFTKQEGRDTSSYAPTETEPPGGHASPTAINTSNRFVVTDSAGARL
Ga0318520_100518771	3300031897	Soil	PEILLGNWRRTTAMPRLLLLTGVILPMANYAFAQDSRDPTPMQCQLIRSAVAQYGFAAARQHALETYGPEAVKTGDKCFTKQEGRDTSSDAATQTEPPGGHSKPHRD
Ga0306923_105524742	3300031910	Soil	MPRLLLLTGVILPMANYAFAQNSPDPTPMQCQLIRSAVAQYGFAAARQHALETYGPEAVKTGDKCFTKQEGRDTSSDAPTETEPPGDHSKPHRD
Ga0306923_107152621	3300031910	Soil	MPRLLLLTGVILLMANYAFAQDSPDPTPMQCQLIRSAVAQYGFAAARQHALETYGPEAVKTGDKCFTKQEGRDTSSYAPTETEPPGGHSKPHRD
Ga0306921_108303871	3300031912	Soil	HAEVVTSNCVILLMANYAFAQDSPDPTPMQCQLIRSAVAQYGFAAARQHALETYGPEAVKTGDKCFTKQEGRDTSSYAPTETEPPGGHSKPHRD
Ga0310912_101770883	3300031941	Soil	LTGVILLMANYAFAQDSPDPTPMQCQLIRSAVAQYGFAAAMQHALETYGPEAVKTGDKCFTKQEGRDTSSYAPTETEPPGGHASPTAINTSNRFVVTDSAGARL
Ga0310916_101700821	3300031942	Soil	MPRLLLLTGVILPMANYAFAQDSRDPTPMQCQLIRSAVAQYGFAAARQHALETYGPEAVKTGDKCFTKQEGRDTSSYAPAETEPPGGHSKPHRD
Ga0310916_114193971	3300031942	Soil	MIEFSPEILLGNWRRTTAMPRLLLLTGVILPMANYAFAQDSPDPTPMQCQLIRSAVAQYGFAAARQHALETYGPEAVKTGDKCFTKQEGRDTSSDAPTETEPPGRQQQQSE
Ga0310913_102214152	3300031945	Soil	MPRLLLLTGVILLMADYAFAQDATDPTPMQCQLIRLAVAQYGFAAARQHALETYGPEAVKIGDKCFTKQEGRDTSSYAPTETEPPRGKPHRD
Ga0310910_102772781	3300031946	Soil	LLTGVILPMANYAFAQDSRDPTPMQCQLIRSAVAQYGFAAARQHALETYGPEAVKTGDKCFTKQEGRDTSSYAPAETEPPGKQQQQSK
Ga0310909_104957204	3300031947	Soil	MPRLLLLTCVILPMANYAFAQYSPDPTPMQCQLIRSAVAQYGFAAARQHALETYGPEAVKTGDKCFTKQEGRDTSSYAPTETEPPGRQQQQSK
Ga0306926_119723791	3300031954	Soil	MPRLLLLTGVILPMANYAFAQDSPDPTPMQCQLIRSAVAQYGFAAARQHALETYGPEAVKTGDKCFTKQEGRDTSSYAPTETEPPGGHSKAHRD
Ga0306926_125369101	3300031954	Soil	MPRLLLLTGIILPMANYAFAQDPPDPTPMQCQLIRSAVAQYGFAAARQHALETYGREAVKTGDKCFTKQEGRDTSSYAPTETEPPGGHSKPHRD
Ga0306926_127942921	3300031954	Soil	MANYAFAQDSPDPTPMQCQLIRSAVAQYGFAAARQHALETYGTEAVKTGDKCFTKQEGRDTSSDAATQTEPPGGHSKPHCD
Ga0306922_101948245	3300032001	Soil	MPRLLLLTGVYLLMANYAFAQDSPDPTPMQCQLIRSAVAQYGFAAARQHALETYGPEAVKTGDKCFTKQEGRDTSSYAPTETEPPGGHASPTAINTSNRFVVTDSAGARL
Ga0306922_114286372	3300032001	Soil	MIEFSEVLLENWRRTAAMPRLLLLTGVILLMADYAFAQDATDPTPMQCQLIRLAVAQYGFAAARQHALETYGPEAVKTGDKCFTKQEGRDT
Ga0318549_100044203	3300032041	Soil	MPRLLLLTGVILPMANYAFAQDSRDPTPMQCQLIRSAVAQYGSAAARQHALETYGAEAVKTGDKCFTKQEGRDTSSYAPTETEPPGRQQQQSK
Ga0318556_101342143	3300032043	Soil	MPRLLLLTGVILLMANYAFAQDSPDPTPMQCQLIRSAVAQYGFAAARQHALETYGPEAVKTGDKCFTKQEERDTSSYAPTETEPPGGHS
Ga0318570_100888102	3300032054	Soil	MPRLLLLTGVILPMANYAFAQDSPDPTPMQCQLIRSAVAQYGFAAARQHALETYGTEAVKTGDKCFTKQEGRDTSSDAATPTEPPGGHSKPHRD
Ga0318553_107719951	3300032068	Soil	MIEFSEVLLENWRRTAAMPRLLLLTGVILLMADYAFAQDATDPAPMQCQLIRLAVAQYGFAAARQHALETYGPEAVKTGDKCFTKQEGRDTSSYAPTETEPPRGKPHRD
Ga0306924_102772664	3300032076	Soil	MPRLLLLTGVILPMANYAFAQDSPDPTPMQCQLIRSAVAQYGFAAARQHALETYGPEAVKTGDKCFTKQEGRYTSSDAPTETEPPGGHSKPHRD
Ga0318525_104291341	3300032089	Soil	MPRLLLLTGVILPMANYAFAQDSRDPTPMQCQLIRSAVAQYGFAAARQHALETYGPEAVKTGDKCFTKQEGRDTSSYAPTVTEPPGGHS
Ga0306920_1001979472	3300032261	Soil	MPRLLLLTGVILLMANYAFAQSSPDPTPMQCHLIRMAVAQYGFAAARQHALETYGAEAVKTGDKCFTKQEGRDTSSYAPTETEPPGRQQQQSK
Ga0306920_1039725891	3300032261	Soil	YAFAQNSPDPTPMQCQLIRSAVAQYGFAAARQHALETYGPEAVKTGDKCFTKQEGRDTSSDAPTETEPPGDHSKPHRD
Ga0335081_1000043512	3300032892	Soil	VSRVLLLFGFGLLAVNYAFAQDSPAPTAMQCHLIKLAVAQYGYAAARQHALEAYGPEAVKTGDKCFAKAQEASGASYEATELKLERGARMKYQR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F061120

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences