Metagenome / Metatranscriptome Family F061101

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F061101
Family Type	Metagenome / Metatranscriptome
Number of Sequences	132
Average Sequence Length	75 residues
Representative Sequence	LSLGATPRSAAEGAVQIGPVSRFVREVGVEYLPIILDAVERTLVPLAAPDGHVSLNGSTWIVSATNPA
Number of Associated Samples	113
Number of Associated Scaffolds	132

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.76 %
% of genes near scaffold ends (potentially truncated)	99.24 %
% of genes from short scaffolds (< 2000 bps)	93.18 %
Associated GOLD sequencing projects	97
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.76

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (62.121 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (14.394 % of family members)
Environment Ontology (ENVO)	Unclassified (40.909 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (58.333 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 37.50% β-sheet: 5.21% Coil/Unstructured: 57.29%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.76
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.76
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Structural matches with SCOPe domains

SCOP family	SCOP domain	Representative PDB	TM-score
a.69.2.1: Ypt/Rab-GAP domain of gyp1p	d2g77a2	2g77	0.55969
c.66.1.0: automated matches	d2efja_	2efj	0.55364
c.69.1.0: automated matches	d5efza_	5efz	0.5528
a.286.1.1: Sama2622-like	d2pv4a1	2pv4	0.55247
a.257.1.1: SipA N-terminal domain-like	d2fm9a1	2fm9	0.55102

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 132 Family Scaffolds
PF01494	FAD_binding_3	17.42
PF04307	YdjM	3.79
PF02133	Transp_cyt_pur	3.79
PF13520	AA_permease_2	3.03
PF07519	Tannase	2.27
PF00232	Glyco_hydro_1	1.52
PF07681	DoxX	1.52
PF00248	Aldo_ket_red	1.52
PF02518	HATPase_c	1.52
PF03313	SDH_alpha	1.52
PF13407	Peripla_BP_4	1.52
PF07311	Dodecin	0.76
PF00171	Aldedh	0.76
PF01433	Peptidase_M1	0.76
PF00326	Peptidase_S9	0.76
PF00561	Abhydrolase_1	0.76
PF00072	Response_reg	0.76
PF13091	PLDc_2	0.76
PF00472	RF-1	0.76
PF01177	Asp_Glu_race	0.76
PF01019	G_glu_transpept	0.76
PF07859	Abhydrolase_3	0.76
PF09084	NMT1	0.76
PF00011	HSP20	0.76
PF04187	Cofac_haem_bdg	0.76
PF07080	DUF1348	0.76
PF00211	Guanylate_cyc	0.76
PF09955	DUF2189	0.76
PF05694	SBP56	0.76
PF01850	PIN	0.76
PF06568	DUF1127	0.76
PF01594	AI-2E_transport	0.76
PF03741	TerC	0.76
PF07589	PEP-CTERM	0.76
PF00082	Peptidase_S8	0.76
PF10282	Lactonase	0.76
PF01872	RibD_C	0.76
PF02738	MoCoBD_1	0.76
PF13511	DUF4124	0.76
PF12697	Abhydrolase_6	0.76

COG ID	Name	Functional Category	% Frequency in 132 Family Scaffolds
COG0654	2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases	Energy production and conversion [C]	34.85
COG0578	Glycerol-3-phosphate dehydrogenase	Energy production and conversion [C]	17.42
COG0644	Dehydrogenase (flavoprotein)	Energy production and conversion [C]	17.42
COG0665	Glycine/D-amino acid oxidase (deaminating)	Amino acid transport and metabolism [E]	17.42
COG1988	Membrane-bound metal-dependent hydrolase YbcI, DUF457 family	General function prediction only [R]	3.79
COG1760	L-serine deaminase	Amino acid transport and metabolism [E]	1.52
COG2259	Uncharacterized membrane protein YphA, DoxX/SURF4 family	Function unknown [S]	1.52
COG2723	Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase	Carbohydrate transport and metabolism [G]	1.52
COG4270	Uncharacterized membrane protein	Function unknown [S]	1.52
COG0014	Gamma-glutamyl phosphate reductase	Amino acid transport and metabolism [E]	0.76
COG0071	Small heat shock protein IbpA, HSP20 family	Posttranslational modification, protein turnover, chaperones [O]	0.76
COG0216	Protein chain release factor RF1	Translation, ribosomal structure and biogenesis [J]	0.76
COG0262	Dihydrofolate reductase	Coenzyme transport and metabolism [H]	0.76
COG0308	Aminopeptidase N, contains DUF3458 domain	Amino acid transport and metabolism [E]	0.76
COG0405	Gamma-glutamyltranspeptidase	Amino acid transport and metabolism [E]	0.76
COG0628	Predicted PurR-regulated permease PerM	General function prediction only [R]	0.76
COG0657	Acetyl esterase/lipase	Lipid transport and metabolism [I]	0.76
COG0715	ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component	Inorganic ion transport and metabolism [P]	0.76
COG0861	Tellurite resistance membrane protein TerC	Inorganic ion transport and metabolism [P]	0.76
COG1012	Acyl-CoA reductase or other NAD-dependent aldehyde dehydrogenase	Lipid transport and metabolism [I]	0.76
COG1186	Protein chain release factor PrfB	Translation, ribosomal structure and biogenesis [J]	0.76
COG1985	Pyrimidine reductase, riboflavin biosynthesis	Coenzyme transport and metabolism [H]	0.76
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	0.76
COG3016	Putative heme-binding protein PhuW	General function prediction only [R]	0.76
COG3360	Flavin-binding protein dodecin	General function prediction only [R]	0.76
COG3558	Uncharacterized conserved protein, nuclear transport factor 2 (NTF2) superfamily	Function unknown [S]	0.76
COG4230	Delta 1-pyrroline-5-carboxylate dehydrogenase	Amino acid transport and metabolism [E]	0.76
COG4521	ABC-type taurine transport system, periplasmic component	Inorganic ion transport and metabolism [P]	0.76
COG5457	Uncharacterized conserved protein YjiS, DUF1127 family	Function unknown [S]	0.76

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	62.88 %
Unclassified	root	N/A	37.12 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	62.88 %
Unclassified	root	N/A	37.12 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	62.12 %
Unclassified	root	N/A	37.12 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.12 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	33.33 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2.27 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.76 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	0.76 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.12 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	12.88 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3.03 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2.27 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.76 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.76 %
Metazoa	kingdom	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa	0.76 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.12 %
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	9.09 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	3.03 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2.27 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	1.52 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.76 %
Eumetazoa	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa	0.76 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.76 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.12 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	9.09 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	1.52 %
alpha proteobacterium Mf 1.05b.01	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → alpha proteobacterium Mf 1.05b.01	0.76 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.76 %
Bilateria	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria	0.76 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	0.76 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	0.76 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.76 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.76 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.76 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.12 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	9.09 %
Limnohabitans	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Limnohabitans	1.52 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.76 %
Protostomia	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia	0.76 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.76 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.76 %
alpha proteobacterium Mf 1.05b.01	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → alpha proteobacterium Mf 1.05b.01	0.76 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.76 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.76 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.76 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.12 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	9.09 %
unclassified Limnohabitans	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Limnohabitans → unclassified Limnohabitans	1.52 %
Spiralia	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Spiralia	0.76 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.76 %
Saccharopolyspora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharopolyspora	0.76 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.76 %
alpha proteobacterium Mf 1.05b.01	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → alpha proteobacterium Mf 1.05b.01	0.76 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.76 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.76 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.76 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.12 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	9.09 %
Limnohabitans sp. T6-5	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Limnohabitans → unclassified Limnohabitans → Limnohabitans sp. T6-5	1.52 %
Streptomyces olindensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces olindensis	0.76 %
Gnathifera	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Spiralia → Gnathifera	0.76 %
Saccharopolyspora erythraea	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharopolyspora → Saccharopolyspora erythraea	0.76 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.76 %
alpha proteobacterium Mf 1.05b.01	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → alpha proteobacterium Mf 1.05b.01	0.76 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.76 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.76 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.76 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.12 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	9.09 %
Limnohabitans sp. T6-5	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Limnohabitans → unclassified Limnohabitans → Limnohabitans sp. T6-5	1.52 %
Rotifera	phylum	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Spiralia → Gnathifera → Rotifera	0.76 %
Streptomyces olindensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces olindensis	0.76 %
Saccharopolyspora erythraea	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharopolyspora → Saccharopolyspora erythraea	0.76 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.76 %
alpha proteobacterium Mf 1.05b.01	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → alpha proteobacterium Mf 1.05b.01	0.76 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.76 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.76 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.76 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.12 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	9.09 %
Limnohabitans sp. T6-5	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Limnohabitans → unclassified Limnohabitans → Limnohabitans sp. T6-5	1.52 %
Eurotatoria	class	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Spiralia → Gnathifera → Rotifera → Eurotatoria	0.76 %
Streptomyces olindensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces olindensis	0.76 %
Saccharopolyspora erythraea	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharopolyspora → Saccharopolyspora erythraea	0.76 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.76 %
alpha proteobacterium Mf 1.05b.01	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → alpha proteobacterium Mf 1.05b.01	0.76 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.76 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.76 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.76 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.12 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	9.09 %
Limnohabitans sp. T6-5	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Limnohabitans → unclassified Limnohabitans → Limnohabitans sp. T6-5	1.52 %
Bdelloidea	subclass	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Spiralia → Gnathifera → Rotifera → Eurotatoria → Bdelloidea	0.76 %
Streptomyces olindensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces olindensis	0.76 %
Saccharopolyspora erythraea	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharopolyspora → Saccharopolyspora erythraea	0.76 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.76 %
alpha proteobacterium Mf 1.05b.01	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → alpha proteobacterium Mf 1.05b.01	0.76 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.76 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.76 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.76 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.12 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	9.09 %
Limnohabitans sp. T6-5	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Limnohabitans → unclassified Limnohabitans → Limnohabitans sp. T6-5	1.52 %
Rotaria	genus	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Spiralia → Gnathifera → Rotifera → Eurotatoria → Bdelloidea → Rotaria	0.76 %
Streptomyces olindensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces olindensis	0.76 %
Saccharopolyspora erythraea	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharopolyspora → Saccharopolyspora erythraea	0.76 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.76 %
alpha proteobacterium Mf 1.05b.01	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → alpha proteobacterium Mf 1.05b.01	0.76 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.76 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.76 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.76 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.12 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	9.09 %
Limnohabitans sp. T6-5	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Limnohabitans → unclassified Limnohabitans → Limnohabitans sp. T6-5	1.52 %
unclassified Rotaria	no rank	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Spiralia → Gnathifera → Rotifera → Eurotatoria → Bdelloidea → Rotaria → unclassified Rotaria	0.76 %
Streptomyces olindensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces olindensis	0.76 %
Saccharopolyspora erythraea	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharopolyspora → Saccharopolyspora erythraea	0.76 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.76 %
alpha proteobacterium Mf 1.05b.01	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → alpha proteobacterium Mf 1.05b.01	0.76 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.76 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.76 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.76 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.12 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	9.09 %
Limnohabitans sp. T6-5	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Limnohabitans → unclassified Limnohabitans → Limnohabitans sp. T6-5	1.52 %
Rotaria sp. Silwood1	species	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Spiralia → Gnathifera → Rotifera → Eurotatoria → Bdelloidea → Rotaria → unclassified Rotaria → Rotaria sp. Silwood1	0.76 %
Streptomyces olindensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces olindensis	0.76 %
Saccharopolyspora erythraea	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharopolyspora → Saccharopolyspora erythraea	0.76 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.76 %
alpha proteobacterium Mf 1.05b.01	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → alpha proteobacterium Mf 1.05b.01	0.76 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.76 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.76 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.76 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.76 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2199352024\|deeps_contig49437.30832	All Organisms → cellular organisms → Bacteria → Proteobacteria	3649	Open in IMG/M
2199352025\|deepsgr__Contig_38338	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	977	Open in IMG/M
3300003369\|JGI24140J50213_10034919	All Organisms → cellular organisms → Bacteria	1841	Open in IMG/M
3300004082\|Ga0062384_100900617	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Limnohabitans → unclassified Limnohabitans → Limnohabitans sp. T6-5	626	Open in IMG/M
3300004092\|Ga0062389_104556818	Not Available	521	Open in IMG/M
3300004157\|Ga0062590_100645755	Not Available	940	Open in IMG/M
3300004157\|Ga0062590_103021011	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → alpha proteobacterium Mf 1.05b.01	504	Open in IMG/M
3300004635\|Ga0062388_102852197	All Organisms → cellular organisms → Bacteria → Proteobacteria	510	Open in IMG/M
3300005167\|Ga0066672_10338422	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	982	Open in IMG/M
3300005186\|Ga0066676_10697552	All Organisms → cellular organisms → Bacteria → Proteobacteria	691	Open in IMG/M
3300005187\|Ga0066675_10380319	All Organisms → cellular organisms → Bacteria	1039	Open in IMG/M
3300005331\|Ga0070670_102058303	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	526	Open in IMG/M
3300005343\|Ga0070687_100281946	Not Available	1046	Open in IMG/M
3300005344\|Ga0070661_101093535	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	664	Open in IMG/M
3300005344\|Ga0070661_101310033	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharopolyspora → Saccharopolyspora erythraea	608	Open in IMG/M
3300005367\|Ga0070667_100172572	All Organisms → cellular organisms → Bacteria	1910	Open in IMG/M
3300005367\|Ga0070667_100846440	Not Available	850	Open in IMG/M
3300005435\|Ga0070714_100504450	All Organisms → cellular organisms → Bacteria → Proteobacteria	1154	Open in IMG/M
3300005437\|Ga0070710_10027422	All Organisms → cellular organisms → Bacteria	3037	Open in IMG/M
3300005444\|Ga0070694_101331561	All Organisms → cellular organisms → Bacteria	605	Open in IMG/M
3300005445\|Ga0070708_100087720	All Organisms → cellular organisms → Bacteria → Proteobacteria	2828	Open in IMG/M
3300005450\|Ga0066682_10306712	Not Available	1024	Open in IMG/M
3300005457\|Ga0070662_101942169	Not Available	508	Open in IMG/M
3300005459\|Ga0068867_100444720	Not Available	1103	Open in IMG/M
3300005466\|Ga0070685_10016636	All Organisms → cellular organisms → Bacteria	3922	Open in IMG/M
3300005468\|Ga0070707_102127072	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	529	Open in IMG/M
3300005468\|Ga0070707_102350021	All Organisms → cellular organisms → Bacteria → Proteobacteria	500	Open in IMG/M
3300005539\|Ga0068853_101583766	All Organisms → cellular organisms → Bacteria	635	Open in IMG/M
3300005539\|Ga0068853_101679822	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces olindensis	615	Open in IMG/M
3300005546\|Ga0070696_101518526	All Organisms → cellular organisms → Bacteria → Proteobacteria	574	Open in IMG/M
3300005555\|Ga0066692_10741169	Not Available	607	Open in IMG/M
3300005556\|Ga0066707_10754815	All Organisms → cellular organisms → Bacteria	605	Open in IMG/M
3300005563\|Ga0068855_102527835	All Organisms → cellular organisms → Bacteria	510	Open in IMG/M
3300005575\|Ga0066702_10676907	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	616	Open in IMG/M
3300005576\|Ga0066708_10841312	Not Available	574	Open in IMG/M
3300005598\|Ga0066706_10412644	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1075	Open in IMG/M
3300005598\|Ga0066706_11013117	Not Available	639	Open in IMG/M
3300005834\|Ga0068851_10063289	All Organisms → cellular organisms → Bacteria	1900	Open in IMG/M
3300005840\|Ga0068870_10327340	Not Available	975	Open in IMG/M
3300005841\|Ga0068863_101191663	All Organisms → cellular organisms → Bacteria	767	Open in IMG/M
3300005843\|Ga0068860_101662889	All Organisms → cellular organisms → Bacteria → Proteobacteria	660	Open in IMG/M
3300006032\|Ga0066696_11088678	Not Available	508	Open in IMG/M
3300006175\|Ga0070712_101982495	All Organisms → cellular organisms → Bacteria	510	Open in IMG/M
3300006796\|Ga0066665_10655303	Not Available	835	Open in IMG/M
3300006797\|Ga0066659_11549510	Not Available	556	Open in IMG/M
3300006800\|Ga0066660_10291471	All Organisms → cellular organisms → Bacteria	1298	Open in IMG/M
3300006880\|Ga0075429_101686615	Not Available	550	Open in IMG/M
3300006881\|Ga0068865_100887179	All Organisms → cellular organisms → Bacteria	775	Open in IMG/M
3300006903\|Ga0075426_10848992	All Organisms → cellular organisms → Bacteria → Proteobacteria	688	Open in IMG/M
3300006904\|Ga0075424_100196553	All Organisms → cellular organisms → Bacteria → Proteobacteria	2142	Open in IMG/M
3300009098\|Ga0105245_10313141	All Organisms → cellular organisms → Bacteria	1544	Open in IMG/M
3300009098\|Ga0105245_12415499	Not Available	579	Open in IMG/M
3300009101\|Ga0105247_10247235	Not Available	1218	Open in IMG/M
3300009137\|Ga0066709_100306958	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2158	Open in IMG/M
3300009148\|Ga0105243_11447787	All Organisms → cellular organisms → Bacteria	709	Open in IMG/M
3300009176\|Ga0105242_13041481	All Organisms → cellular organisms → Bacteria	519	Open in IMG/M
3300009545\|Ga0105237_11621776	All Organisms → cellular organisms → Bacteria → Proteobacteria	654	Open in IMG/M
3300009545\|Ga0105237_12275320	All Organisms → cellular organisms → Bacteria → Proteobacteria	552	Open in IMG/M
3300009651\|Ga0105859_1124597	All Organisms → cellular organisms → Bacteria → Proteobacteria	711	Open in IMG/M
3300010396\|Ga0134126_10617729	Not Available	1239	Open in IMG/M
3300010396\|Ga0134126_11968705	Not Available	639	Open in IMG/M
3300010396\|Ga0134126_12770177	All Organisms → cellular organisms → Bacteria	532	Open in IMG/M
3300010399\|Ga0134127_12533980	All Organisms → cellular organisms → Bacteria	593	Open in IMG/M
3300010400\|Ga0134122_10388214	All Organisms → cellular organisms → Bacteria → Proteobacteria	1229	Open in IMG/M
3300012200\|Ga0137382_10884825	Not Available	644	Open in IMG/M
3300012205\|Ga0137362_10753711	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	835	Open in IMG/M
3300012205\|Ga0137362_10851546	Not Available	780	Open in IMG/M
3300012205\|Ga0137362_11059881	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	689	Open in IMG/M
3300012206\|Ga0137380_10762357	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	837	Open in IMG/M
3300012285\|Ga0137370_10400113	Not Available	832	Open in IMG/M
3300012356\|Ga0137371_10802172	Not Available	717	Open in IMG/M
3300012957\|Ga0164303_11484883	All Organisms → cellular organisms → Bacteria	511	Open in IMG/M
3300012960\|Ga0164301_11058379	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	642	Open in IMG/M
3300013100\|Ga0157373_11231958	Not Available	565	Open in IMG/M
3300013105\|Ga0157369_10252941	All Organisms → cellular organisms → Bacteria	1838	Open in IMG/M
3300013297\|Ga0157378_10446793	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1282	Open in IMG/M
3300014056\|Ga0120125_1185775	Not Available	514	Open in IMG/M
3300014166\|Ga0134079_10670643	Not Available	525	Open in IMG/M
3300014497\|Ga0182008_10104092	All Organisms → cellular organisms → Bacteria	1404	Open in IMG/M
3300014969\|Ga0157376_10203387	Not Available	1824	Open in IMG/M
3300014969\|Ga0157376_10371889	All Organisms → cellular organisms → Bacteria → Proteobacteria	1374	Open in IMG/M
3300015371\|Ga0132258_12299674	Not Available	1352	Open in IMG/M
3300015371\|Ga0132258_13406851	All Organisms → cellular organisms → Bacteria	1092	Open in IMG/M
3300015372\|Ga0132256_101677392	Not Available	745	Open in IMG/M
3300015372\|Ga0132256_103551544	Not Available	524	Open in IMG/M
3300015373\|Ga0132257_103203074	All Organisms → cellular organisms → Bacteria	596	Open in IMG/M
3300015374\|Ga0132255_101311879	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1092	Open in IMG/M
3300017927\|Ga0187824_10106022	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	908	Open in IMG/M
3300017936\|Ga0187821_10037410	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1724	Open in IMG/M
3300018075\|Ga0184632_10481394	Not Available	511	Open in IMG/M
3300018431\|Ga0066655_10851527	All Organisms → cellular organisms → Bacteria	621	Open in IMG/M
3300018433\|Ga0066667_10497044	All Organisms → cellular organisms → Bacteria	1004	Open in IMG/M
3300018476\|Ga0190274_10133889	All Organisms → cellular organisms → Bacteria → Proteobacteria	2054	Open in IMG/M
3300018481\|Ga0190271_11882410	Not Available	709	Open in IMG/M
3300018482\|Ga0066669_11793436	Not Available	567	Open in IMG/M
3300020070\|Ga0206356_11671351	Not Available	530	Open in IMG/M
3300021344\|Ga0193719_10213797	All Organisms → cellular organisms → Bacteria	821	Open in IMG/M
3300025903\|Ga0207680_11057439	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	581	Open in IMG/M
3300025907\|Ga0207645_10196235	All Organisms → cellular organisms → Bacteria	1327	Open in IMG/M
3300025910\|Ga0207684_11493349	Not Available	550	Open in IMG/M
3300025914\|Ga0207671_11151003	All Organisms → cellular organisms → Bacteria → Proteobacteria	608	Open in IMG/M
3300025915\|Ga0207693_10139794	Not Available	1904	Open in IMG/M
3300025918\|Ga0207662_10295816	Not Available	1075	Open in IMG/M
3300025925\|Ga0207650_10239984	Not Available	1464	Open in IMG/M
3300025927\|Ga0207687_10134779	All Organisms → cellular organisms → Bacteria	1867	Open in IMG/M
3300025927\|Ga0207687_10226775	All Organisms → cellular organisms → Bacteria	1474	Open in IMG/M
3300025927\|Ga0207687_10286131	Not Available	1323	Open in IMG/M
3300025934\|Ga0207686_11277513	Not Available	602	Open in IMG/M
3300025939\|Ga0207665_10733550	Not Available	778	Open in IMG/M
3300025949\|Ga0207667_10389042	All Organisms → cellular organisms → Bacteria → Proteobacteria	1420	Open in IMG/M
3300025972\|Ga0207668_10259104	All Organisms → cellular organisms → Bacteria	1416	Open in IMG/M
3300025986\|Ga0207658_10805103	Not Available	853	Open in IMG/M
3300025986\|Ga0207658_11446552	Not Available	629	Open in IMG/M
3300026035\|Ga0207703_11344256	All Organisms → cellular organisms → Bacteria	687	Open in IMG/M
3300026089\|Ga0207648_10382319	Not Available	1273	Open in IMG/M
3300026095\|Ga0207676_11939085	All Organisms → cellular organisms → Bacteria → Proteobacteria	588	Open in IMG/M
3300026118\|Ga0207675_101278159	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	754	Open in IMG/M
3300026329\|Ga0209375_1105236	All Organisms → cellular organisms → Bacteria → Proteobacteria	1261	Open in IMG/M
3300026523\|Ga0209808_1272196	Not Available	541	Open in IMG/M
3300026538\|Ga0209056_10113850	All Organisms → cellular organisms → Bacteria → Proteobacteria	2167	Open in IMG/M
3300026547\|Ga0209156_10264632	Not Available	790	Open in IMG/M
3300026547\|Ga0209156_10374144	Not Available	604	Open in IMG/M
3300027660\|Ga0209736_1190660	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	534	Open in IMG/M
3300027783\|Ga0209448_10180606	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Limnohabitans → unclassified Limnohabitans → Limnohabitans sp. T6-5	702	Open in IMG/M
3300027894\|Ga0209068_10602160	Not Available	639	Open in IMG/M
3300029636\|Ga0222749_10586109	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	608	Open in IMG/M
3300031521\|Ga0311364_11183096	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Spiralia → Gnathifera → Rotifera → Eurotatoria → Bdelloidea → Rotaria → unclassified Rotaria → Rotaria sp. Silwood1	760	Open in IMG/M
3300031726\|Ga0302321_100223646	All Organisms → cellular organisms → Bacteria	1979	Open in IMG/M
3300032157\|Ga0315912_10240421	All Organisms → cellular organisms → Bacteria → Proteobacteria	1423	Open in IMG/M
3300032180\|Ga0307471_100421954	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1467	Open in IMG/M
3300032421\|Ga0310812_10124837	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1077	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	59.85%
Host-Associated	Host-Associated	40.15%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	53.79%
Plants	Host-Associated → Plants	40.15%
Aquatic	Environmental → Aquatic	6.06%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	51.52%
Rhizosphere	Host-Associated → Plants → Rhizosphere	26.52%
Rhizoplane	Host-Associated → Plants → Rhizoplane	13.64%
Freshwater	Environmental → Aquatic → Freshwater	4.55%
Peat	Environmental → Terrestrial → Peat	2.27%
Sediment	Environmental → Aquatic → Sediment	1.52%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	39.39%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	15.91%
Loam	Environmental → Terrestrial → Soil → Loam	11.36%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	10.61%
Soil	Host-Associated → Plants → Rhizosphere → Soil	10.61%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	4.55%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.03%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	2.27%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.52%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	17.42%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	17.42%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	15.91%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	10.61%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	10.61%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	10.61%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	3.03%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.03%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	2.27%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.52%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.52%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.52%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	1.52%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.52%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.76%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.76%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	14.39%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	7.58%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	6.06%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	6.06%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.30%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.30%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	3.79%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	3.79%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	3.79%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	3.03%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.03%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	3.03%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	3.03%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	2.27%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	2.27%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.27%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.27%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.27%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.27%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.52%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.52%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.52%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.52%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	1.52%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.76%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.76%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.76%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.76%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.76%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	0.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.76%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.76%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	0.76%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.76%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.76%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.76%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.76%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.76%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2199352024	Bare-fallow DEEP SOIL	Environmental	Open in IMG/M
2199352025	Soil microbial communities from Rothamsted, UK, for project Deep Soil - DEEP SOIL	Environmental	Open in IMG/M
3300003369	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Incubations 002-22A	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005834	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2	Host-Associated	Open in IMG/M
3300005840	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2	Host-Associated	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009651	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-063	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300013100	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG	Host-Associated	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300014056	Permafrost microbial communities from Nunavut, Canada - A20_5cm_0M	Environmental	Open in IMG/M
3300014166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015	Environmental	Open in IMG/M
3300014497	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017927	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_4	Environmental	Open in IMG/M
3300017936	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_1	Environmental	Open in IMG/M
3300018075	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b1	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300020070	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300021344	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2	Environmental	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025949	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131 (SPAdes)	Environmental	Open in IMG/M
3300026523	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157 (SPAdes)	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300026547	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 (SPAdes)	Environmental	Open in IMG/M
3300027660	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300027783	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027894	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes)	Environmental	Open in IMG/M
3300028870	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_E1_4	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031521	III_Fen_E2 coassembly	Environmental	Open in IMG/M
3300031726	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_1	Environmental	Open in IMG/M
3300032157	Garden soil microbial communities collected in Santa Monica, California, United States - V. faba soil	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032421	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NN3	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
deeps_00163050	2199352024	Soil	VQRFDVPLSLGSTARSAAEFAVQIGPLSRLVREVGVEHLPTILDAVERALAPLAAADGHVSLNGSTWIVSATNPG
deepsgr_00294870	2199352025	Soil	MRAILSGAGFGAVDVQRFDAALSLGATPRSAAEASVQIGAVSRFVREVGVEHLPIIVEAVERALGPLAATDGHVSLTARPGSCQLPIPFEL
JGI24140J50213_100349192	3300003369	Arctic Peat Soil	ERIDLHRFDAPVFLGATPRSAAENATRIGPTSRFLREAGMENLSAILDAIEGALTPLAAPDGRVSLNGSAWIVAASNP*
Ga0062384_1009006171	3300004082	Bog Forest Soil	GATPRSAAEVATRIGAVSRFVREVGVEHLPIILEAVERALGPLATSDGHVSLNGSTWIVSVTNPA*
Ga0062389_1045568181	3300004092	Bog Forest Soil	QRFDATLPLGATPRSAAETAVQIGPVSRFVREVGVEHLPIIVEAVERALEPFATSDGNVSLNGSTWIVSVRNPA*
Ga0062590_1006457551	3300004157	Soil	YLGATPRSAAEGVVQIGPVSRFVRETGVEHLPTILDAVERALEPLAAPDGHVSLNGSTWIVSATNPV*
Ga0062590_1030210111	3300004157	Soil	ADEARLRTILSDSGFGDIELQRFDAAIFLGPTPRSAAEGAVQMGPVARLVRETGAEHLPVIVDAIEEVLTPLAAPNGHVSLNGSTWVVVAANPA*
Ga0062388_1028521971	3300004635	Bog Forest Soil	FADEQRLRAILSGAGFGAVGVQRFDAALPLGATPRSAAEVATRIGAVSRFVREVGVEHLPIILEAVERALGPLATSDGHVSLNGSTWIVSVTNPA*
Ga0066672_103384223	3300005167	Soil	LGATPRSAAESVVQVGPVSRLVREVGAEHLPIILDAVEGALAPLAAPDGRVSLDGSTWIASATNPA*
Ga0066676_106975521	3300005186	Soil	AAIFLGATPRAAAEGVIQIGPVSRLVREAGVEHLPIILEAVERTLAPLAAPDGRVSLNGSTWIVSATNPS*
Ga0066675_103803191	3300005187	Soil	DVQRFDTAIALGASPRAAAQRVIQIGPVSRLVRESGAEHLPIILDAVERALGPLAAADGHVSLNGSTWIVSATNPG*
Ga0070670_1020583032	3300005331	Switchgrass Rhizosphere	ADEERLRTILSDAGFGNIDLQRFDTAIFLGTTPRSAAEGVVQMGPVSRLVREVGVEHLPIIVDAIERTLTPLAAPNGHVSLNGSTWIVAATNPA*
Ga0070687_1002819461	3300005343	Switchgrass Rhizosphere	PRSAAEGVVQMGPVSRLVREVGVERLPIIVDAIERTLTPLAAPNGHVSLNGSTWIVAATNPA*
Ga0070661_1010935352	3300005344	Corn Rhizosphere	LGSTARSAAGFAVQIGPVSRFVREVGVEHLPTILDAVERALAPLAAADGHVSLNGSTWIVSATNPG*
Ga0070661_1013100331	3300005344	Corn Rhizosphere	IAVQRRDVPLSLGATVRSAAEFAVNTGPVSRFVREMGVEHLPTITDAVERALAPLASADGSVSLTGSTWIVSATNSG*
Ga0070667_1001725722	3300005367	Switchgrass Rhizosphere	LSDAGFGNIDLQRFDTAIFLGTTPRSAAEGVVQMGPVARLVREVGVEHLPIIVDAVERALAPHAAPNGHVSLNGSTWIVAATNPA*
Ga0070667_1008464402	3300005367	Switchgrass Rhizosphere	FQAVGVRRFDAQIDLGATPRVAAENSAQIGPASRFVREMGSEQLPVIVDAIERALAAVAAPDGHVKLNGSAWIVTATNPT*
Ga0070714_1005044502	3300005435	Agricultural Soil	TPRSAAERVVQIGPVSRFVREAGAGHLPTILDAVERSLAPLAAPDGEVSLNGSAWIVSATNPG*
Ga0070710_100274221	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	AIFLGPTPRSAAEGAVHIGPVARLVRETGTEHLPLIIDAIEEVLTSLAAPNGHVSLNGSTWVVLATNPT*
Ga0070694_1013315611	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	LRAILSSAGFGAIDVRRFDAALCLGATPRSAAEGVVQIGPVSRFVREAGVEHLPIILDAVERALAPLAAPDGHVSLNGSTWIVSATNLA*
Ga0070708_1000877204	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	SLGATPRSAAESLVQVGPVSRLVREVGVEHLPIIVDAVERALAPLAAPDGHVSLNGSTWIVSATNPP*
Ga0066682_103067121	3300005450	Soil	LSLGATPRSAAEGAVQIGAVSRFVREVGAEHLPTILDAVERILAPLAAPDGHVSLNGSTWIVSATNFA*
Ga0070662_1019421691	3300005457	Corn Rhizosphere	FLGPTPRSAAEGAVQMGPVARLVRETGTEHLPVIVDAIEEVLTPLAAPNGHVSLNGSTWVVLATNPT*
Ga0068867_1004447201	3300005459	Miscanthus Rhizosphere	RFDTAIFLGTTPRSAAEGVVQMGPVSRLVREVGVERLPIIVDAIERTLTPLAAPNGHVSLNGSTWIVSATNPA*
Ga0070685_100166364	3300005466	Switchgrass Rhizosphere	IFLGTTPRSAAEGVVQMGPVSRLVREVGVERLPIIVDAIERTLTPLAAPNGHVSLNGSTWIVAATNPA*
Ga0070707_1021270722	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	AFADEERLRTILSDAGFGNIDLQRFDTAIFLGTTPRSAAEGVVQMGPVSRLVREVGVEHLPIIVDAIERTLTPLAAPNGHVSLNGSTWIVAATNPA*
Ga0070707_1023500211	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	DVQRFDADVSLGDTPRAAAEAALRIGPTSRFLREVGVEHETLIRGAVERALSPFAAPDGKVRLSGSTWIVSASNPG*
Ga0068853_1015837662	3300005539	Corn Rhizosphere	LSDAGFGNIDLQRFDTAIFLGTTPRSAAEGVVQMGPVSRLVREVGVEHLPIIVDAIERTLTPLAAPNGHVSLNGSTWIVAATNPA*
Ga0068853_1016798221	3300005539	Corn Rhizosphere	QRCDVPLSLGATVRSAAEFAVHTGPVSRFVREMGVEHLPTITDAVERALAPLASADGSVSLTGSTWIVSATNSG*
Ga0070696_1015185261	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	LGATPRSAAEGTVQIGPVSRFVREAGVEHLPKILDAVERSFAMLAASDGHVSLNGSTWIVSAANPAR*
Ga0066692_107411692	3300005555	Soil	LSLGATPRSAAEGAVQIGPVSRFVREVGVEYLPIILDAVERTLVPLAAPDGHVSLNGSTWIVSATNPA*
Ga0066707_107548152	3300005556	Soil	GAGFGDIDVQRFDSAIILGATPRSAAEGAVQIGPVSRFVREVGVEHLPIIRDAVERTLALLAAPDGHVSLNGSAWIVSATNPA*
Ga0068855_1025278351	3300005563	Corn Rhizosphere	FDAIRMQRVDVPLSLGTTARSAAQFALQVGPVSRFARESGVEHLPTILDAVERAFAPLAEAEGQVRLNGSAWIVSATNPG*
Ga0066702_106769071	3300005575	Soil	ATPRSAAESVVQVGPVSRLVREVGAEHLPIILDAVEGALAPLAAPDGRVSLDGSTWIASATNPA*
Ga0066708_108413121	3300005576	Soil	GATPRSAAEAATQVGPVSRFVREVGAEHLPAILDAVERTLAPLAAPDGHVRLNGSTWIFSATNPA*
Ga0066706_104126442	3300005598	Soil	AAESVVQVGPVSRLVREMGAEYLPIIVDAVERALVPLAAPDGRVSLNGSTWIASATNPA*
Ga0066706_110131172	3300005598	Soil	AGFDAIDVQRFDAALSLGATPRSAAEGAVQIGAVSRFVREVGAEHLPTILDAVERTLAPLAAPDGHVSLNGSTWIVSATNFA*
Ga0068851_100632891	3300005834	Corn Rhizosphere	FLGPTPRSAAEGAVQMGPVARLVRETGTEHLPVIVDAIEEVLTPLAAPNGHVSLNGSTWVVLATNPA*
Ga0068870_103273401	3300005840	Miscanthus Rhizosphere	NIDLQRFDTAIFLGTTPRSAAEGVVQMGPVSRLVREVGVERLPIIVDAIERTLTPLAAPNGHVSLNGSTWIVAATNPA*
Ga0068863_1011916632	3300005841	Switchgrass Rhizosphere	DIDLQRFDAALYLGATPRSAAEGVVQIGPVSRFVREVGVEHLPVILDAVERALVPLAAPGGHVSLNGSTWIVSATNAA*
Ga0068860_1016628892	3300005843	Switchgrass Rhizosphere	AVQMQRFDAELCLGATPRSAAETSVQIGAVSRFVREAGVEHLPIIVDAVERALAPHAAPDGQVNLKGSTWIVSVANPA*
Ga0066696_110886782	3300006032	Soil	AAIYVGATPRSAAENAVQIGPVARLVREVGSEHLAVITDAVERALAPLAAPNGHVSLKGSTWIVSATNR*
Ga0070712_1019824952	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	SLGATPRTAAEASVQIGPVSRLVRETGAEHLPVILEAVERALGPYASSDGHVSLSGSTWIVSGTSPA*
Ga0066665_106553032	3300006796	Soil	SLGATPRSAAESAVQIGPVSRFVREVGLEHLPVILDAVERTLAALAAPDGHVSMNGSTWIVSATNPAGVASN*
Ga0066659_115495102	3300006797	Soil	GAIDVQRFDAALPLGATPRFAAESAVQIGPVSRLVREVGVEHVPVILDAVERALVPLAAPDGQVSLNGSAWIVSATNPA*
Ga0066660_102914711	3300006800	Soil	DRLRAILSGARFGAIDVQRFDAALSLGATPRSAAESVVQIGPVSRFVREVGVEHLPAILDAVERALVPLAAPDGHVRLNGSTWIVSATNPA*
Ga0075429_1016866152	3300006880	Populus Rhizosphere	PRSAAETAVQIGAVSRFVREVGVQHLPIIVKAVERALGPFTATDGHVSLDGSTWIVSATNPV*
Ga0068865_1008871791	3300006881	Miscanthus Rhizosphere	LSDAGFGNIDLQRFDTAIFLGTTPRSAAEGVVQMGPVSRLVREVGVERLPIIVDAIERTLTPLAAPNGHVSLNGSTWIVAATNPA*
Ga0075426_108489921	3300006903	Populus Rhizosphere	QRFDAALLLGATPRSAAEAAVQIGPVSRLVREVGVEHLPIILDAVERALNPVAAPDGHVSLNGSAWIVSATNPA*
Ga0075424_1001965531	3300006904	Populus Rhizosphere	GATPRSAAEGAVQIGPVSRLVREVGPKHLPIILDAVEQALVPFAAPDGHVSLNGSAWIVLASNHA*
Ga0105245_103131414	3300009098	Miscanthus Rhizosphere	LADAGFEKASIQRFDAPIHLGATPRAAAENAARIGPVSRFVREVGIESLPVIVDAIESALRPLAAPDGRVSLVGSTWLVVASNP*
Ga0105245_124154991	3300009098	Miscanthus Rhizosphere	LQRFDAAIFLGPTPRSAAEGAVQMGPVARLVRETGTEHLPVIVDAIEEVLTPLAAPNGHVSLNGSTWVVVAANPA*
Ga0105247_102472351	3300009101	Switchgrass Rhizosphere	ERLRTILSDAGFGNIDLQRFDTAIFLGTTPRSAAEGVVQMGPVSRLVREVGVEHLPIIVDAIERTLTPLAAPNGHVSLNGSTWIVAATNPA*
Ga0066709_1003069583	3300009137	Grasslands Soil	AGFGGIDVQRFDAAVSLGATPRSAAESAVQIGPVSRFVREAGLEHLPVILDAVERALAALAAPDGHVSMNGSAWIVSATNPA*
Ga0105243_114477872	3300009148	Miscanthus Rhizosphere	RAAAEHVLQIGPASRFVREVGVEHLPVILDAVERALGEVAAPDGQVSLNGSTWIVSASNPA*
Ga0105242_130414812	3300009176	Miscanthus Rhizosphere	RTILSDAGFGNIDLQRFDTAIFLGTTPRTAAEGVVQMGPVARLVREVGVEHLPIIVDAVERALAPHAAPNGHVSLNGSTWIVAATNPA*
Ga0105237_116217762	3300009545	Corn Rhizosphere	AGFDAVDVQRLDVSLALGASPRVAAEHVLQIGPASRFVREVGVDHLPVILAAVERALSEVAAPDGQVSLNGSSWIVSASNPA*
Ga0105237_122753201	3300009545	Corn Rhizosphere	AAEGVVQMGPVSRLVREVGVEHLPIIVDAIERTLTPLAAPNGHVSLNGSTWIVSATNPA*
Ga0105859_11245972	3300009651	Permafrost Soil	DVQRFDAAISIGATPRSAAENAVQIGPVSRLVREVGVEHLPAILEAVERTLAPLGTPDGRVHLNGSTWIVSAENPT*
Ga0134126_106177291	3300010396	Terrestrial Soil	LSLGATVRSAAEFAVNTGPVSRFVREMGVEHLPTITDAVERAFAPLASADGSVSLTGSTWIVSARNSG*
Ga0134126_119687051	3300010396	Terrestrial Soil	FDVPLSLGSTARSAAGFAVQIAPVSRFVREVGVEHLPTILDAVERALAPLAAADGHVSLNGSTWIVSATNPG*
Ga0134126_127701772	3300010396	Terrestrial Soil	DAGFDAIRMQRVDVSLSLGTTARSAAQFALQVGPVSRFARESGVEHLPTILDAVERAFAPLAEAEGQVRLNGSTWIVSATNPG*
Ga0134127_125339802	3300010399	Terrestrial Soil	MQRVDVPLSLGTTARSAAQFALQVGPVSRFARESGVEHLPTILDAVERAFAPLAEAEGQVRLNGSTWIVSATNPG*
Ga0134122_103882142	3300010400	Terrestrial Soil	EAIDVQRVDVPLPLGASPRAAAEHVLQIGPASRFVREVGVDHLPVILAAVERALSEVAAPDGQVSLNGSSWIVSASNPA*
Ga0137382_108848252	3300012200	Vadose Zone Soil	AAIFLGATPRAAAERVIQIGPVSRLVRESGDEHLPIILDAVEHALAPLAAPDGHVSLSGSTWIVSAANPG*
Ga0137362_107537111	3300012205	Vadose Zone Soil	AISLGGGRRSNKESVVQVGPVSRLVREMGAEYLPIIVDAVERALVPLAAPDGRVSLNGSTWIASATNPA*
Ga0137362_108515462	3300012205	Vadose Zone Soil	SLGATPRSAAENATRIGPVSRLVREVGGEHLPLILDAVEHSLTPLATPDGHVSLNGSTWVVSATNPA*
Ga0137362_110598811	3300012205	Vadose Zone Soil	TPRSAAEGTVQIGPVSRFVREVGAEHLPIILDAVERALAPLAAPDGQVSLNGSTWIVAATNPA*
Ga0137380_107623572	3300012206	Vadose Zone Soil	FYAALSLCATPRSAAEGAVQIGPVSRSVREVGVEYLPIILNAVERTLVPLAAPDGHVSLNGSTWIVSATNPA*
Ga0137370_104001132	3300012285	Vadose Zone Soil	SAAQSAVQIGPASRFVREVGVEHLPTILDAVERALAPLAAPNGHVRLNGSTWIVSAMNPA
Ga0137371_108021722	3300012356	Vadose Zone Soil	LGATPRSAAEGAVQIGAVSRFVREVGAEHLPTILDAVERTLAPLAAPDGHVSLNGSTWIVSATNFA*
Ga0164303_114848831	3300012957	Soil	RTAAEGAVQMGPVSRLVRETGVENLPIIVDAIERTLAPLAAPNGHVSLNGSTWIVAATNPA*
Ga0164301_110583792	3300012960	Soil	IDMQRVDAALSLGATPRSATERVVQIGPVSRFVREVGVEHLPIILDAVERALTPLAAPDGHVSLNGSTWVVSAANPG*
Ga0157373_112319582	3300013100	Corn Rhizosphere	LSDAGFGNIDLQRFDTAIFRGTTPRSAAEGVVQMGPVARLVREVGVEHLPIIVDAVEQALAPHAAPNGHVSLNGSTWIVAATNPA*
Ga0157369_102529411	3300013105	Corn Rhizosphere	LGPTPRSAAEGAVQMGPVARLVRETGAEHLPVIVDAIEEVLTPLAAPNGHVSLNGSTWVVLATNPA*
Ga0157378_104467931	3300013297	Miscanthus Rhizosphere	AISMTRFDAPVFLGATPRAAAENAARIGPVSRFVRETGIEHLPVVLAALEKTFVPLAASDGRIALNGSTWIVSATNPG*
Ga0120125_11857752	3300014056	Permafrost	IHVQRFDVPLSLGSTARSDAGFAVQIGPVSRFVREVGIEHLPTILDAVERALAPLAAADGHVSLNGSTWIVSATNPG*
Ga0134079_106706431	3300014166	Grasslands Soil	QRFDAALSLGPTPRAAAEAAVQVGAVSRFVREVGVEHLPIILEAVERALGPLAATDGHVSLSGSTWIVSVINPA*
Ga0182008_101040922	3300014497	Rhizosphere	RMQRVDVPLSLGTTARSAAQFALQVGPVSRFARESGVEHLPTILDAVERAFAPLAEAEGQVRLNGSTWIVSATNPG*
Ga0157376_102033872	3300014969	Miscanthus Rhizosphere	PFAFAYEQRVRSIMSEAGFGAVDVQRFDAAVTLGATPRSAAEAAVQVGAVSRFVREVGEAHLPIIVEAVERALVPFAATDGHVSLNGSTWIVSATSTA*
Ga0157376_103718893	3300014969	Miscanthus Rhizosphere	ADEERLRTILSDAGFGNIDLQRFDTAIFLGTTPRTGAEGVVQMGPVARIVREVGVEHLPIIVDAVEQALAPHAAPNGHFSLNGSTWIVAATNPA*
Ga0132258_122996741	3300015371	Arabidopsis Rhizosphere	AAETSVQIGAVSRFVREAGVENLPIIVDAVERALAPHAAPDGQVNLKGSTWIVSVANPA*
Ga0132258_134068512	3300015371	Arabidopsis Rhizosphere	DVQRFDAALPLGATPRSAAESVVQIGPVSRLVREVGVEHLPIILDAVERALVPVAAPDGHVSLNGSAWIVSATNPA*
Ga0132256_1016773922	3300015372	Arabidopsis Rhizosphere	GATPRSAAEASVQIGAVSRFVREVGVEHLPIIVEAVERALGPLAATDGHVSLNGSTWIVSATNPV*
Ga0132256_1035515442	3300015372	Arabidopsis Rhizosphere	AIDVQRFDAALPLGATPRSAAESVVQIGPVSRLVREVGVEHLPIILDAVERALVPVAAPAGHVSLNGSAWIVSATNPA*
Ga0132257_1032030741	3300015373	Arabidopsis Rhizosphere	GFGAIDVQRFDAALLLGATPRSAAEGVVQIGPVSRLVREVGVEHLPIILDAVERALVPVAAPDGHVSLNGSAWIVSATNPA*
Ga0132255_1013118792	3300015374	Arabidopsis Rhizosphere	AVSLGATPRSAAEAAVQVGAVSRFVREVGAEHLPVILEAVERALVPHAATDGHVSLNGSTWIVSATNPV*
Ga0187824_101060221	3300017927	Freshwater Sediment	ATPRAAAERAVQLGPASRLVREVGVEHLPVILEAIERALAPLAAADGQVHLNGSCWIVSALNRA
Ga0187821_100374101	3300017936	Freshwater Sediment	RFDAAIALGADPRSAAESAAQLGPVSRLVREVGVEHLPVIIDALERALAPLAAADGHVSLSGSAWIVSAANSG
Ga0184632_104813941	3300018075	Groundwater Sediment	RAILSGAGFGAIDVQRFDAALFLGAAPRSAAEGAVQIGPVSRFVREVGVEHVPIILDAVEHTFAPLAAPDGKVSLNGSTWIVSAANPA
Ga0066655_108515272	3300018431	Grasslands Soil	AIALGASPRAAAQRVIQIGPVSRLVRESGAEHLPIILDAVERALGPLAAADGHVSLNGSTWIVSATNPG
Ga0066667_104970441	3300018433	Grasslands Soil	ILSGAGFGAIDVRRFDTAIFLGATPRAAAERVIQIGPVSRLVRESGAEHLPVILDAVERALGPLAAADGHVSLNGSTWIVSATNPG
Ga0190274_101338891	3300018476	Soil	DAAVSLGATPRAAAENTVQFGPVGRLVREMGTEQVPKILDAVERELAPLAAPDGRVSLNGSTWVVSASNPG
Ga0190271_118824102	3300018481	Soil	VSLGATPRGAAGNTVQFGPVGRLVREVGTEHLPKILDAVERELAPLAAPDGNVSLNGSTWVVSASDPG
Ga0066669_117934362	3300018482	Grasslands Soil	SAAGFGAIDVQRLDAAIYVGATPRSAAENAVQIGPVARLVREVGNEHLPVITDAVERVLAPLAAPNGHVSLKGSTWIVSATNR
Ga0206356_116713511	3300020070	Corn, Switchgrass And Miscanthus Rhizosphere	GDIELQRFDAAIFLGPTPRSAAEGAVQMGPVARLVRETGTEHLPVIVDAIEEVLTPLAAPNGHVSLNGSTWVVLATNPA
Ga0193719_102137972	3300021344	Soil	IDVQRFDGATPRSAAESAVQIGPVSRLVRELGVEHLPIILDAVERTLALLAAPDGHVTLDGSTWIVSATNPA
Ga0207680_110574391	3300025903	Switchgrass Rhizosphere	DIELKRFDAAIFLGPTPRSAAEGAVQMGPVARLVRETGTEHLPVIVDAIEEVLTPLAAPNGHVSLNGSTWVVLATNPA
Ga0207645_101962353	3300025907	Miscanthus Rhizosphere	TTPRSAAEGVVQMGPVARLVREVGVEHLPIIVDAVERALAPHAAPNGHVSLNGSTWVVVAANPG
Ga0207684_114933491	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	SVAGFGAIDIQRFDAVLSLGATPRSAAEGTVQIGPVSRFVREVGAEHLPIILDAVERTLAPLAAPDGHVSLNGSTWIVAATNPA
Ga0207671_111510032	3300025914	Corn Rhizosphere	AAEGVVQMGPVSRLVREVGVERLPIIVDAIERTLTPLAAPNGHVSLNGSTWIVSATNPA
Ga0207693_101397944	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	GDVEVQRFDAAISLGATPRTAAEASVQIGPVSRLVRETGAEHLPVILEAVERALGPYASSDGHVSLSGSTWIVSGTSPA
Ga0207662_102958161	3300025918	Switchgrass Rhizosphere	GTTPRSAAEGVVQMGPVSRLVREVGVERLPIIVDAIERTLTPLAAPNGHVSLNGSTWIVAATNPA
Ga0207650_102399842	3300025925	Switchgrass Rhizosphere	LRTILSDAGFGNIDLQRFDTAIFLGTTPRSAAEGVVQMGPVSRLVREVGVEHLPIIVDAIERTLTPLAAPNGHVSLNGSTWIVAATNPA
Ga0207687_101347791	3300025927	Miscanthus Rhizosphere	ELKRFDAAIFLGPTPRSAAEGAVQMGPVARLVRETGTEHLPVIVDAIEEVLTPLAAPNGHVSLNGSTWVVVAANPA
Ga0207687_102267754	3300025927	Miscanthus Rhizosphere	LALADAGFEKASIQRFDAPIHLGATPRAAAENAARIGPVSRFVREVGIESLPVIVDAIESALRPLAAPDGRVSLVGSTWLVVASNP
Ga0207687_102861312	3300025927	Miscanthus Rhizosphere	FDTAIFLGTTPRSAAEGVVQMGPVARLVREVGVEHLPIIVDAVERALAPHAAPNGHVSLNGSTWIVAATNPA
Ga0207686_112775132	3300025934	Miscanthus Rhizosphere	VTLGATPRSAAEAAVQVGAVSRFVREVGEAHLPIIVEAVERALVPFAATDGHVSLNGSTWIVSATSTA
Ga0207665_107335502	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	DEARLRMILSDSGFGNIDVQRFDAAIFLGPTPRSAAEGAVHIGPVARLVRETGTEHLPLIIDAIEEVLTPLAAPNGHVSLNGSTWVVVATNPA
Ga0207667_103890423	3300025949	Corn Rhizosphere	ILSDSGFGDIELQRFDAAIFLGPTPRSAAEGAVQMGPVARLVRETGAEHLPVIVDAIEEVLTPLAAPNGHVSLNGSTWVVVAANPA
Ga0207668_102591044	3300025972	Switchgrass Rhizosphere	VFLGATPRAAAENAARIGPVSRFVRETGIEHLPVVLAALEKTFVPLAASDGRIALNGSTWIVSATNPG
Ga0207658_108051031	3300025986	Switchgrass Rhizosphere	GFQAVGVRRFDAQIDLGATPRVAAENSAQIGPASRFVREMGSEQLPVIVDAIERALAAVAAPDGHVKLNGSAWIVTATNPT
Ga0207658_114465522	3300025986	Switchgrass Rhizosphere	FDAAVTLGATPRSAAEAAVQVGAVSRFVREVGEAHLPIIVEAVERALVPFAATDGHVSLNGSTWIVSATSTA
Ga0207703_113442561	3300026035	Switchgrass Rhizosphere	GASPRAAAEHVLQIGPASRFVREVGVEHLPVILDAVERALGEVAAPDGQVSLNGSTWIVSASNPA
Ga0207648_103823192	3300026089	Miscanthus Rhizosphere	RFDTAIFLGTTPRSAAEGVVQMGPVSRLVREVGVERLPIIVDAIERTLTPLAAPNGHVSLNGSTWIVSATNPA
Ga0207676_119390852	3300026095	Switchgrass Rhizosphere	LALGASPRVAAEHVLQIGPASRFVREVGVEHLPVILDAVERALGEVAAPDGQVSLNGSTWIVSASNPA
Ga0207675_1012781592	3300026118	Switchgrass Rhizosphere	FGAVDVQRFDAMLFLGATPRSAAEAAVQVGAVSRFVREVGVERLPIILEAVERALGPLAATDGHVSLSGSTWIVSVINPA
Ga0209375_11052363	3300026329	Soil	TPRSAAEGAVQIGAVSRFVREVGAEHLPTILDAVERTLAPLAAPDGHVSLNGSTWIVSATNFA
Ga0209808_12721962	3300026523	Soil	LGATPRSAAENVVQIGPVARLVREVGAEHLPIILDAVERTLAPLAAPDGHVSLNGSTWIVSATNFA
Ga0209056_101138501	3300026538	Soil	FDAIDVQRFDAALSLGATPRSAAEGAVQIGAVSRFVREVGAEHLPTILDAVERTLAPLAAPDGHVSLNGSTWIVSATNFA
Ga0209156_102646321	3300026547	Soil	GFGGIDVQRFDAAVSLGATPRSAAESAVQIGPVSRFVREVGLEHLPVILDAVERTLAALAAPDGHVSMNGSAWIVSATNPA
Ga0209156_103741442	3300026547	Soil	RAILSAAGFGAIDVQRLDAAIYVGATPRSAAENAVQIGPVARLVREVGSEHLPVITDAVERALAPLAAPNGHVSLKGSTWIVSATNR
Ga0209736_11906601	3300027660	Forest Soil	SDAGFGDVDVQRFDAVISIGATPRSAAESVVQVGPVSRLVREVGAEHLPIIVDGVERALAPLAAPDGHVSLNGSTWIASATNPT
Ga0209448_101806061	3300027783	Bog Forest Soil	SLGATPRSAAEAAVQIGPVSRFVREVGVEHLPIILEAVERALGPFATSDGHVSLNGSTWIVSVTNPA
Ga0209068_106021602	3300027894	Watersheds	TIAAQRFDAMLTIGATPRAAAEGCIQIGPVSRLVREVGVEHAPTIQAAVERALAPLAEPDGRVSLGGSTWIVSATNR
Ga0302254_102762942	3300028870	Fen	PVPIGETARDAAEYATRIGPTSRFLREVGVEHRPAILAAVEAAFTAVAAPDGRVVLNGSTWIVLATNPG
Ga0222749_105861092	3300029636	Soil	PRSAAESLVQVGPVARLVREVGAEHLPIIVDAVERALAPLAAPDGHVSLNGSTWIVSATNPP
Ga0311364_111830962	3300031521	Fen	TLGATPRSAAQGALRIGPASRFAQEMGAEQLPKILDAVESALVPLAMSDGQVRLNGSTWIISASTPA
Ga0302321_1002236462	3300031726	Fen	LRAILEDSGFDNVAFQRFDTSLTLGATPHDAAERALRVGPTSRFVREVGMEHLPKISDAVEHAFALLAAPDGRVLLNGSTWIVSATNPG
Ga0315912_102404211	3300032157	Soil	ATPRGAAGNTVQFGPVGRLVREVGTEHLPKILDAVERELAPLAAPDGNVSLNGSTWVVSASNPG
Ga0307471_1004219541	3300032180	Hardwood Forest Soil	FDATLFLGATPRSAAEGAVQIGPVSRFVREVGVEHVPIILDAVERSFATLAAPDGHVSLSGSTWIVSATNPA
Ga0310812_101248371	3300032421	Soil	SGFGDIELQRFDAAIFLGPTPRSAAEGAVQMGPVARLVRETGTEHLPVIVDAIEEVLTPLAAPNGHVSLNGSTWVVVAANPA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F061101

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences