Metagenome / Metatranscriptome Family F061065

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F061065
Family Type	Metagenome / Metatranscriptome
Number of Sequences	132
Average Sequence Length	44 residues
Representative Sequence	MTATQPGTHQSGRFARIVRRVAGVVEEMNYAQRRSVELFLGLDERR
Number of Associated Samples	91
Number of Associated Scaffolds	132

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	83.97 %
% of genes near scaffold ends (potentially truncated)	37.88 %
% of genes from short scaffolds (< 2000 bps)	85.61 %
Associated GOLD sequencing projects	84
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (87.879 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (40.909 % of family members)
Environment Ontology (ENVO)	Unclassified (52.273 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (51.515 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 69.57% β-sheet: 0.00% Coil/Unstructured: 30.43%
Feature Viewer

Powered by Feature Viewer

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 132 Family Scaffolds
PF11716	MDMPI_N	46.97
PF00296	Bac_luciferase	19.70
PF00248	Aldo_ket_red	6.06
PF01520	Amidase_3	3.79
PF02627	CMD	3.03
PF01609	DDE_Tnp_1	0.76
PF00392	GntR	0.76
PF04672	Methyltransf_19	0.76
PF04542	Sigma70_r2	0.76
PF08281	Sigma70_r4_2	0.76
PF02470	MlaD	0.76

COG ID	Name	Functional Category	% Frequency in 132 Family Scaffolds
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	19.70
COG0860	N-acetylmuramoyl-L-alanine amidase	Cell wall/membrane/envelope biogenesis [M]	3.79
COG0599	Uncharacterized conserved protein YurZ, alkylhydroperoxidase/carboxymuconolactone decarboxylase family	General function prediction only [R]	3.03
COG2128	Alkylhydroperoxidase family enzyme, contains CxxC motif	Inorganic ion transport and metabolism [P]	3.03
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	0.76
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	0.76
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	0.76
COG3039	Transposase and inactivated derivatives, IS5 family	Mobilome: prophages, transposons [X]	0.76
COG3293	Transposase	Mobilome: prophages, transposons [X]	0.76
COG3385	IS4 transposase InsG	Mobilome: prophages, transposons [X]	0.76
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	0.76
COG5421	Transposase	Mobilome: prophages, transposons [X]	0.76
COG5433	Predicted transposase YbfD/YdcC associated with H repeats	Mobilome: prophages, transposons [X]	0.76
COG5659	SRSO17 transposase	Mobilome: prophages, transposons [X]	0.76

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	87.88 %
Unclassified	root	N/A	12.12 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	87.88 %
Unclassified	root	N/A	12.12 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	87.88 %
Unclassified	root	N/A	12.12 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	87.12 %
Unclassified	root	N/A	12.12 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	86.36 %
Unclassified	root	N/A	12.12 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	48.48 %
Unclassified	root	N/A	12.12 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	13.64 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	12.12 %
Unclassified	root	N/A	12.12 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	4.55 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	4.55 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	13.64 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	12.12 %
Unclassified	root	N/A	12.12 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	4.55 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	4.55 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Actinoplanes	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes	13.64 %
Saccharopolyspora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharopolyspora	12.12 %
Unclassified	root	N/A	12.12 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	4.55 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	2.27 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Actinoplanes flavus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes → Actinoplanes flavus	13.64 %
Saccharopolyspora pogona	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharopolyspora → Saccharopolyspora pogona	12.12 %
Unclassified	root	N/A	12.12 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	4.55 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	2.27 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.76 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004268\|Ga0066398_10060821	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	791	Open in IMG/M
3300004479\|Ga0062595_102012045	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	558	Open in IMG/M
3300004633\|Ga0066395_10500514	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes → Actinoplanes flavus	700	Open in IMG/M
3300005332\|Ga0066388_100205042	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2594	Open in IMG/M
3300005332\|Ga0066388_100513956	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1832	Open in IMG/M
3300005332\|Ga0066388_103820292	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	769	Open in IMG/M
3300005332\|Ga0066388_105262519	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharopolyspora → Saccharopolyspora pogona	656	Open in IMG/M
3300005332\|Ga0066388_108608779	Not Available	507	Open in IMG/M
3300005363\|Ga0008090_15521095	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1220	Open in IMG/M
3300005363\|Ga0008090_15840991	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1233	Open in IMG/M
3300005435\|Ga0070714_100762714	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes → Actinoplanes flavus	936	Open in IMG/M
3300005436\|Ga0070713_100390138	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1299	Open in IMG/M
3300005537\|Ga0070730_10006115	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	10313	Open in IMG/M
3300005537\|Ga0070730_10068030	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2519	Open in IMG/M
3300005713\|Ga0066905_102342552	Not Available	500	Open in IMG/M
3300005764\|Ga0066903_101116803	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1455	Open in IMG/M
3300005764\|Ga0066903_101229428	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1393	Open in IMG/M
3300005764\|Ga0066903_101804645	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1168	Open in IMG/M
3300005764\|Ga0066903_103450711	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	852	Open in IMG/M
3300005764\|Ga0066903_103856568	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes → Actinoplanes flavus	805	Open in IMG/M
3300005764\|Ga0066903_104278896	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes → Actinoplanes flavus	763	Open in IMG/M
3300005764\|Ga0066903_108182154	Not Available	535	Open in IMG/M
3300006176\|Ga0070765_101481423	Not Available	639	Open in IMG/M
3300006755\|Ga0079222_10373618	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharopolyspora → Saccharopolyspora pogona	976	Open in IMG/M
3300006804\|Ga0079221_10973610	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes → Actinoplanes flavus	633	Open in IMG/M
3300006806\|Ga0079220_10378418	All Organisms → cellular organisms → Bacteria → Terrabacteria group	914	Open in IMG/M
3300006806\|Ga0079220_11193393	Not Available	627	Open in IMG/M
3300006852\|Ga0075433_10042961	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3923	Open in IMG/M
3300006893\|Ga0073928_10835244	All Organisms → cellular organisms → Bacteria → Proteobacteria	635	Open in IMG/M
3300006904\|Ga0075424_100994230	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharopolyspora → Saccharopolyspora pogona	894	Open in IMG/M
3300006914\|Ga0075436_100006389	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	8077	Open in IMG/M
3300009088\|Ga0099830_10912688	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	726	Open in IMG/M
3300009792\|Ga0126374_10471790	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	897	Open in IMG/M
3300010046\|Ga0126384_10361810	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1213	Open in IMG/M
3300010046\|Ga0126384_11144394	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes → Actinoplanes flavus	715	Open in IMG/M
3300010359\|Ga0126376_12211494	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes → Actinoplanes flavus	595	Open in IMG/M
3300010359\|Ga0126376_12555246	Not Available	559	Open in IMG/M
3300010360\|Ga0126372_10950151	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes → Actinoplanes flavus	867	Open in IMG/M
3300010361\|Ga0126378_10398703	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1488	Open in IMG/M
3300010362\|Ga0126377_10057337	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3417	Open in IMG/M
3300010362\|Ga0126377_10207506	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1882	Open in IMG/M
3300010366\|Ga0126379_10306500	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1597	Open in IMG/M
3300010366\|Ga0126379_12058974	Not Available	673	Open in IMG/M
3300010366\|Ga0126379_12988572	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	566	Open in IMG/M
3300010376\|Ga0126381_100108920	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3557	Open in IMG/M
3300010376\|Ga0126381_100944519	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1242	Open in IMG/M
3300010398\|Ga0126383_12031078	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes → Actinoplanes flavus	662	Open in IMG/M
3300012198\|Ga0137364_10397140	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1032	Open in IMG/M
3300012199\|Ga0137383_10131028	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1831	Open in IMG/M
3300012948\|Ga0126375_11280069	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes → Actinoplanes flavus	615	Open in IMG/M
3300012971\|Ga0126369_11385964	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	793	Open in IMG/M
3300016341\|Ga0182035_10927630	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharopolyspora → Saccharopolyspora pogona	769	Open in IMG/M
3300016341\|Ga0182035_11834272	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	549	Open in IMG/M
3300016341\|Ga0182035_11978937	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes → Actinoplanes flavus	529	Open in IMG/M
3300016357\|Ga0182032_10248329	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1382	Open in IMG/M
3300016371\|Ga0182034_11747259	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharopolyspora → Saccharopolyspora pogona	548	Open in IMG/M
3300016387\|Ga0182040_11494837	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes → Actinoplanes flavus	573	Open in IMG/M
3300016404\|Ga0182037_12009778	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	519	Open in IMG/M
3300021432\|Ga0210384_10147365	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	2112	Open in IMG/M
3300021560\|Ga0126371_12426792	Not Available	634	Open in IMG/M
3300025910\|Ga0207684_10012403	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	7414	Open in IMG/M
3300026551\|Ga0209648_10578921	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes → Actinoplanes flavus	621	Open in IMG/M
3300027527\|Ga0209684_1008171	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharopolyspora → Saccharopolyspora pogona	1699	Open in IMG/M
3300027857\|Ga0209166_10007155	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	7466	Open in IMG/M
3300027857\|Ga0209166_10087600	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1751	Open in IMG/M
3300027874\|Ga0209465_10140164	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1198	Open in IMG/M
3300027874\|Ga0209465_10146222	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharopolyspora → Saccharopolyspora pogona	1173	Open in IMG/M
3300028906\|Ga0308309_11357817	Not Available	610	Open in IMG/M
3300031543\|Ga0318516_10070136	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1942	Open in IMG/M
3300031543\|Ga0318516_10103938	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1607	Open in IMG/M
3300031543\|Ga0318516_10157700	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1305	Open in IMG/M
3300031543\|Ga0318516_10198362	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1158	Open in IMG/M
3300031543\|Ga0318516_10271844	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	980	Open in IMG/M
3300031544\|Ga0318534_10012647	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	4292	Open in IMG/M
3300031544\|Ga0318534_10047399	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2399	Open in IMG/M
3300031544\|Ga0318534_10527803	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	673	Open in IMG/M
3300031544\|Ga0318534_10869221	Not Available	505	Open in IMG/M
3300031544\|Ga0318534_10878998	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	502	Open in IMG/M
3300031546\|Ga0318538_10135767	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1292	Open in IMG/M
3300031549\|Ga0318571_10028847	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1525	Open in IMG/M
3300031561\|Ga0318528_10226849	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharopolyspora → Saccharopolyspora pogona	1001	Open in IMG/M
3300031564\|Ga0318573_10130264	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1309	Open in IMG/M
3300031668\|Ga0318542_10060743	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1744	Open in IMG/M
3300031679\|Ga0318561_10092551	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1579	Open in IMG/M
3300031680\|Ga0318574_10744980	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes → Actinoplanes flavus	574	Open in IMG/M
3300031681\|Ga0318572_10101753	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	1622	Open in IMG/M
3300031681\|Ga0318572_10319972	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	918	Open in IMG/M
3300031682\|Ga0318560_10371108	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	773	Open in IMG/M
3300031713\|Ga0318496_10143645	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1300	Open in IMG/M
3300031723\|Ga0318493_10812384	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	527	Open in IMG/M
3300031744\|Ga0306918_11361976	Not Available	545	Open in IMG/M
3300031747\|Ga0318502_10326415	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	905	Open in IMG/M
3300031747\|Ga0318502_10761572	Not Available	586	Open in IMG/M
3300031764\|Ga0318535_10509716	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharopolyspora → Saccharopolyspora pogona	534	Open in IMG/M
3300031771\|Ga0318546_10054821	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2494	Open in IMG/M
3300031771\|Ga0318546_10510577	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	843	Open in IMG/M
3300031779\|Ga0318566_10401928	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharopolyspora → Saccharopolyspora pogona	674	Open in IMG/M
3300031781\|Ga0318547_10542495	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	719	Open in IMG/M
3300031792\|Ga0318529_10058180	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1681	Open in IMG/M
3300031795\|Ga0318557_10027455	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2275	Open in IMG/M
3300031795\|Ga0318557_10587048	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	511	Open in IMG/M
3300031798\|Ga0318523_10398550	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharopolyspora → Saccharopolyspora pogona	684	Open in IMG/M
3300031845\|Ga0318511_10115971	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1150	Open in IMG/M
3300031879\|Ga0306919_10175989	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1577	Open in IMG/M
3300031879\|Ga0306919_10926845	Not Available	667	Open in IMG/M
3300031890\|Ga0306925_10328663	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1643	Open in IMG/M
3300031897\|Ga0318520_10064444	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1969	Open in IMG/M
3300031942\|Ga0310916_11472979	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes → Actinoplanes flavus	556	Open in IMG/M
3300031945\|Ga0310913_11178364	Not Available	534	Open in IMG/M
3300031947\|Ga0310909_10305493	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1333	Open in IMG/M
3300031981\|Ga0318531_10233829	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	829	Open in IMG/M
3300032001\|Ga0306922_10223168	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2023	Open in IMG/M
3300032001\|Ga0306922_11491790	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharopolyspora → Saccharopolyspora pogona	676	Open in IMG/M
3300032009\|Ga0318563_10032749	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2608	Open in IMG/M
3300032009\|Ga0318563_10509405	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes → Actinoplanes flavus	650	Open in IMG/M
3300032035\|Ga0310911_10630761	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharopolyspora → Saccharopolyspora pogona	621	Open in IMG/M
3300032039\|Ga0318559_10109207	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1231	Open in IMG/M
3300032043\|Ga0318556_10063357	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1815	Open in IMG/M
3300032052\|Ga0318506_10059280	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	1565	Open in IMG/M
3300032052\|Ga0318506_10178223	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	935	Open in IMG/M
3300032054\|Ga0318570_10158888	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1013	Open in IMG/M
3300032055\|Ga0318575_10271915	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes → Actinoplanes flavus	856	Open in IMG/M
3300032064\|Ga0318510_10276851	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharopolyspora → Saccharopolyspora pogona	695	Open in IMG/M
3300032066\|Ga0318514_10072532	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1705	Open in IMG/M
3300032066\|Ga0318514_10371988	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharopolyspora → Saccharopolyspora pogona	758	Open in IMG/M
3300032068\|Ga0318553_10518989	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes → Actinoplanes flavus	624	Open in IMG/M
3300032076\|Ga0306924_10096623	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3334	Open in IMG/M
3300032091\|Ga0318577_10445405	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharopolyspora → Saccharopolyspora pogona	618	Open in IMG/M
3300032180\|Ga0307471_104002484	Not Available	521	Open in IMG/M
3300032261\|Ga0306920_100173729	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3212	Open in IMG/M
3300032261\|Ga0306920_101639790	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	913	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.73%
Host-Associated	Host-Associated	2.27%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	96.97%
Plants	Host-Associated → Plants	2.27%
Aquatic	Environmental → Aquatic	0.76%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	96.97%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.27%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	79.55%
Loam	Environmental → Terrestrial → Soil → Loam	17.42%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.27%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.76%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	53.79%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	18.94%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	15.15%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.79%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.27%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.27%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.52%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	1.52%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.76%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	40.91%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	13.64%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	13.64%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	12.12%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	3.03%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	3.03%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.27%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.27%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.52%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.52%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	1.52%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.76%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.76%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.76%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.76%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004268	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300027527	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 6 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027857	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031549	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032009	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0066398_100608211	3300004268	Tropical Forest Soil	MTTTQPGTYQSGRFARIVRRVTSVVGDMNYAQRRSVELFTGLNEWR*
Ga0062595_1020120452	3300004479	Soil	TERSIAMTATQPGTRHQSGRFARIVRHVADVVGEMNYAQRRSVELFLGLDERQR*
Ga0066395_105005142	3300004633	Tropical Forest Soil	MTAMQPGTHQSGRFARIVRRVADVVEEMNYAQRRSVELFLGLDERR*
Ga0066684_105435891	3300005179	Soil	MTAIQPRTRFGRVVHRVASVVGEMNYAQRRSVELFLGLDERR*
Ga0066388_1002050422	3300005332	Tropical Forest Soil	MTATQPGTRHQSGRFARIVRRVADVVGEMNYAQRRSVELFLDLDERQR*
Ga0066388_1005139561	3300005332	Tropical Forest Soil	MTATQPGTRQQPGRLARIARRVADVVGEMNYAQRRSVELFLDLDERR*
Ga0066388_1038202922	3300005332	Tropical Forest Soil	MTATQQKTHQSGRFARIVRRVTGVVEEMNYAQRRSVELFL
Ga0066388_1052625191	3300005332	Tropical Forest Soil	MTATQPGTHQSGRFARIVRRVAGVVEEMNYAQRRSVELFLGLDERH*
Ga0066388_1086087791	3300005332	Tropical Forest Soil	MTATQPGTHQSGRFARIVRRVADVVGEMNYAQQRSVELFTGLDERQR*
Ga0008090_155210952	3300005363	Tropical Rainforest Soil	MTATQPGTRHQSGRFARIVRRVASVVEEMNYAQRRSVELFLGLDERPR*
Ga0008090_158409912	3300005363	Tropical Rainforest Soil	MTATQPGTHQSGRFARIVRRVTGVVEEMNYAQRRSVELFLGLDERR*
Ga0070714_1007627141	3300005435	Agricultural Soil	MTATQPGTRHQSGRFARIVRHVADVVGEMNYAQRRSVELFLGLDERQR*
Ga0070713_1003901382	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MTATQPGTHQSGRFARIVQRVTGAVEEMNYAQRRSVEVFLGLDERH*
Ga0070730_100061152	3300005537	Surface Soil	MTAIQPGTRHQPTRFARIVRRVAGIVEEMNYAQRRSLELFLGVDSHRR*
Ga0070730_100680304	3300005537	Surface Soil	MTAIQTGTRHQPTRFARIVRRVAGAVEEMNYAQRRSLELFLGLDSHGR*
Ga0066905_1023425522	3300005713	Tropical Forest Soil	MTATQPGTHQSGRFARIVQRVTGVVKEMNYAQRRSVELFTGLDERR*
Ga0066903_1011168033	3300005764	Tropical Forest Soil	MTATQPGTRHQPGRFARIVRRVAGVVGEMNYAQRRSVELFLGLDERR*
Ga0066903_1012294282	3300005764	Tropical Forest Soil	MTATQQETHQSGRFARIVRRMTGVVEEMNYAQRRSVELFLGLDERH*
Ga0066903_1018046452	3300005764	Tropical Forest Soil	MTATQQRTHQSGRFARIVRRVTGVVEEMNYAQRRSVELFLGLDERH*
Ga0066903_1034507112	3300005764	Tropical Forest Soil	MTATQPGTHQSGRFARIVRRVTGVVEEMNYAQRRSVELFLGLDERH*
Ga0066903_1038565682	3300005764	Tropical Forest Soil	MTATQPGTHQSGRFARIVRRVTGVVGEMNYAQRRSVELFLDLDERR*
Ga0066903_1042788961	3300005764	Tropical Forest Soil	MIATQPGTHQSGRFARIVRRVAGVVEEMNYAQRRSVELFLGLDERR*
Ga0066903_1081821541	3300005764	Tropical Forest Soil	MTAMQPGTHQSGRLARIVRRVADVVEEMNYAQRRSVELFLGLDERR*
Ga0070765_1014814232	3300006176	Soil	MTATQSGTQHGRFARIVRRVAATVEEMNYSQRRALELFLGLDEHRR*
Ga0079222_103736182	3300006755	Agricultural Soil	MTATQPGTHQSGRFARIVRRVAGVVEEMNYAQRRSVELFLGLDERR*
Ga0079221_109736101	3300006804	Agricultural Soil	MTATQPGTHQSGRFARIVQRVTGAVEEMNYAQRRSVELFLGLDERH*
Ga0079220_103784181	3300006806	Agricultural Soil	MTATQLGTHQSGRFARIVRRVTGVVEEMNYAQRRSVELFLG
Ga0079220_111933932	3300006806	Agricultural Soil	MTATQPGTHQSGRFARIVQRVTGAVEEMNYAQRRSVELFLGLDERR*
Ga0075433_100429613	3300006852	Populus Rhizosphere	MTATQSGTHQSGRFARIVRRVAGVVEEMNYAQRRSVELFLGLDERH*
Ga0073928_108352442	3300006893	Iron-Sulfur Acid Spring	MTATQSGTRFARIVRRVAGVVEEMNYSQRRALELFLGLDERRR*
Ga0075424_1009942301	3300006904	Populus Rhizosphere	MTATQRGTQSGRFARIVRRVAGVVEEMNYAQHRSVELFLGLDERH*
Ga0075436_10000638910	3300006914	Populus Rhizosphere	MTATQSGTHQSGRFARIVRRVAGVVEEMNYAQRRSVELFLG
Ga0099830_109126881	3300009088	Vadose Zone Soil	MTATQRKSGRLARIVRRVAGVVEEMNYADRRSVELFLGLDERR*
Ga0126374_104717901	3300009792	Tropical Forest Soil	MTATQQGTHQSGRFARIVRRVTGVVEEMNYAQRRSVELFLGLDERH*
Ga0126384_103618102	3300010046	Tropical Forest Soil	MTAMQPGTRHQSGRFARIVRRVAGVVEEMNYAQRRSVELFLDLDERQR*
Ga0126384_111443942	3300010046	Tropical Forest Soil	MTATQQRTHQSGRLARIVRRVTGVVEEMNYAQRRSVELFLGLDERH*
Ga0126376_122114942	3300010359	Tropical Forest Soil	MTATQPGTRHQPGRFARIVRRVAGVVGEMNYAQRRSVQLFLGLDERR*
Ga0126376_125552462	3300010359	Tropical Forest Soil	MNATQPGTYQSGRFARTVRRVAGVVGEMNYAQRRSVELFLGLDERH*
Ga0126372_109501512	3300010360	Tropical Forest Soil	MTAMQPGTHQSARFARIVRRVADVVEEMNYAQRRSVELFLGLDERR*
Ga0126378_103987032	3300010361	Tropical Forest Soil	MTATQPGTRHQSGRFARIARRVAGVVQEMNYAQRRSVELFLDLDERQR*
Ga0126377_100573373	3300010362	Tropical Forest Soil	MTTTQPGTYQSGRFARIVRRVTSVVGDMNYAQRRSVELFTGLNDWR*
Ga0126377_102075061	3300010362	Tropical Forest Soil	QRGASAMTATQPGTHQSGRFARIVQRVTGVVKEMNYAQRRSVELFTGLDERR*
Ga0126379_103065002	3300010366	Tropical Forest Soil	MTATQPGTRQSGRFARIVRRVTGVVGEMNYAQRRSVELFLDLDERR*
Ga0126379_120589742	3300010366	Tropical Forest Soil	MTSTQPGTRHQPGRFARIVRRVAGVVGEMNYAQRRSVELFLGLDERR*
Ga0126379_129885721	3300010366	Tropical Forest Soil	MTATQPGTRHQSGRFARIVRRVAGVVEEMNYAQRRSVELFLGLDERR*
Ga0126381_1001089203	3300010376	Tropical Forest Soil	MTATQPGTHQSGRFARIVRRVTGAVEEMNYAQRRSVELFLGLDERR*
Ga0126381_1009445194	3300010376	Tropical Forest Soil	MTTTQPGTHQSGRFARIVQRVTGAVEEMNYAQRRSVELFLGL
Ga0126383_120310781	3300010398	Tropical Forest Soil	MTAMQPGTHQSGRFARIVRRVAGVVEEMNYAQRRSVELFLGLDERR*
Ga0137364_103971402	3300012198	Vadose Zone Soil	LSVTERSIAMTATQPGTHQPGRFARIVRRVTGVVEEMNYAQRRSVELFLGLDERH*
Ga0137383_101310283	3300012199	Vadose Zone Soil	MTATQPETRHQSGRFARIVRHVADVVGEMNYAQRRSVELFLGLDERQR*
Ga0126375_112800692	3300012948	Tropical Forest Soil	MTAMQPGTRHQSGRFARIVRRVAGVVEEMNYAQRRSVELFTGLDERQR*
Ga0126369_113859641	3300012971	Tropical Forest Soil	MTTTQPGTYQSGRFARIVRRVTSVVGDMNYAQRRSV
Ga0182035_109276301	3300016341	Soil	PGTHQSGRFARIVRRVADVVEEMNYAQRRSVELFLGLDERP
Ga0182035_118342721	3300016341	Soil	PGTHQSGRFARIVRRVADVVEEMNYAQRRSVELFLGLDERR
Ga0182035_119789372	3300016341	Soil	MTATQQGTHQSGRFARIVRRVAGVVEEMNYAQRRSVELFLG
Ga0182032_102483291	3300016357	Soil	RGASAMTATQPGTHQSGRFARIVRRVAGVVEEMNYAQRRSVELFLGLDERR
Ga0182034_117472591	3300016371	Soil	MTATQPGTHQSGRFARIVRRVTGVVEEMNYAQRRSVELFLGLDERR
Ga0182040_114948371	3300016387	Soil	MTAMQPGTHQSGRFARIVRRVADVVEEMNYAQRRS
Ga0182037_120097781	3300016404	Soil	MTATQPGTRHQSGRFARIVRRVAGVVEEMNYAQQRSVELFLGLDERTR
Ga0210384_101473651	3300021432	Soil	MTATQSGTKQTRLARIVHRVASVVEEMNYAQRRSLELFLSLDGDRR
Ga0126371_124267922	3300021560	Tropical Forest Soil	MTATQLGTHQSGRFARIVRRVTGVVEEMNYAQRRSVELFLGLDERH
Ga0207684_100124038	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MTATQPGTRHQSGRFARIVRHVADVVGEMNYAQRRSVELFLGLDERQR
Ga0209648_105789211	3300026551	Grasslands Soil	MTATQRKSGRLARIVRRVAGVVEEMNYADRRSVELFLGLDERR
Ga0209684_10081713	3300027527	Tropical Forest Soil	MTATQPGTRQQPGRLARIARRVADVVGEMNYAQRRSVELFLDLDERR
Ga0209166_100071557	3300027857	Surface Soil	MTAIQPGTRHQPTRFARIVRRVAGIVEEMNYAQRRSLELFLGVDSHRR
Ga0209166_100876002	3300027857	Surface Soil	MTAIQTGTRHQPTRFARIVRRVAGAVEEMNYAQRRSLELFLGLDSHGR
Ga0209465_101401641	3300027874	Tropical Forest Soil	MNATQPGTYQSGRFARTVRRVAGVVGEMNYAQRRSVELFLDLDERR
Ga0209465_101462222	3300027874	Tropical Forest Soil	MTAMQPGTHQSGRFARIVRRVADVVEEMNYAQRRSVELFLGLDERR
Ga0308309_113578172	3300028906	Soil	MTATQSGTQHGRFARIVRRVAATVEEMNYSQRRALELFLGLDEHRR
Ga0318516_100701362	3300031543	Soil	MTATQPGTHQSGRFARIVRRVADVVEEMNYAQRRSVELFLGLDERP
Ga0318516_101039381	3300031543	Soil	MTATQPGTRHQSGRFARIVRRVAGVVGEMNYAQQRSVELF
Ga0318516_101577001	3300031543	Soil	MTATQHQSGRIARIARRVAGVVGEMNYAQRRSVELFLGLDERR
Ga0318516_101983622	3300031543	Soil	MTATQPGTRHQSGRFARIVRRVAGMVGEMNYAQQRSVELFLGLDERAR
Ga0318516_102718442	3300031543	Soil	MTATQPGTHQSGSFARIVRRVAAVVGEMNYAQRRSVELFLGLDERR
Ga0318534_100126471	3300031544	Soil	GTHQSGRFARIVRRVADVVEEMNYAQRRSVELFLGLDERP
Ga0318534_100473993	3300031544	Soil	MTATQPGTHQSGSFARIVRRVAGVVGEMNYAQRRSVELFLGLDERR
Ga0318534_105278031	3300031544	Soil	MTATQSGTRHQSGRFARIVRRVAGVVEEMNYAQQRSVELFLGLDERTR
Ga0318534_108692211	3300031544	Soil	MTATQPGTHQSGRFARIVRRVAGVVEEMNYAQRRSVELFLGLDERR
Ga0318534_108789981	3300031544	Soil	MTATQPGTHQSGRFARIVRRVTGVVEEMNYAQRRSVELFLGLDERH
Ga0318538_101357673	3300031546	Soil	MTATQPGTHQSGRFARIVRRVADVVEEMNYAQRRSVELFLGL
Ga0318571_100288473	3300031549	Soil	MTAMQPGTHQSGRFARIVRRVADVVEEMNYAQRRSVELFLGLDERP
Ga0318528_102268491	3300031561	Soil	MTATQPGTRHQSGRFARIVRRVAGVVGEMNYAQQRSVELFLGLDERAR
Ga0318573_101302643	3300031564	Soil	MTATQSGTRHQSGRFARIVRRVAGVVEEMNYAQQRSVELFL
Ga0318542_100607431	3300031668	Soil	MTAMQPGTHQSGRFARIVRRVADVVEEMNYAQRRSVELFLGL
Ga0318561_100925511	3300031679	Soil	MTAMQPGTHQSGRFARIVRRVADVVEEMNYAQRRSVELFL
Ga0318574_107449802	3300031680	Soil	MSTTQLGTHQSGRFARIVRRVTGVVEEMNYAQRRSVEL
Ga0318572_101017533	3300031681	Soil	QPGTHQSGRFARIVRRVADVVEEMNYAQRRSVELFLGLDERP
Ga0318572_103199722	3300031681	Soil	MTAMQPGTHQSGRFARIVRRVADVVEEMNYAQRRSVE
Ga0318560_103711082	3300031682	Soil	MTAMQPGTHQSGRFARIVRRVADVVEEMNYAQRRNS
Ga0318496_101436451	3300031713	Soil	MTAMQPGTHQSGRFARIVRRVADVVEEMNYAQRRSVEL
Ga0318493_108123842	3300031723	Soil	MSTTQLGTHQSGRFARIVRRVTGVVEEMNYAQRRSVELFLGLDERH
Ga0306918_113619762	3300031744	Soil	MTATQQGTHQSGRFARIVRRVAGVVEEMNYAQRRSVELFLGLDERH
Ga0318502_103264151	3300031747	Soil	MTATQPGTHQSGRLARIVRRVAGVVEEMNYAQRRSVELFL
Ga0318502_107615721	3300031747	Soil	MTATQPGTHQSGSFARIVRRVAGVVSEMNYAQRRSVELFLGLDERR
Ga0318535_105097161	3300031764	Soil	HQSGRLARIVRRVAGVVEEMNYAQRRSVELFLGLDERH
Ga0318546_100548211	3300031771	Soil	MTAMQPGTHQSGRFARIVRRVADVVEEMNYAQRRSVELF
Ga0318546_105105772	3300031771	Soil	MTATQPGTHQSGRFARIVRRVADVVEEMNYAQRRSV
Ga0318566_104019282	3300031779	Soil	MTATQPGTHQSGRLARIVRRVADVVEEMNYAQRRSVELFLGLDERH
Ga0318547_105424952	3300031781	Soil	MTATQPGTHQSGRFARIVRRVAGVVEEMNYAQRRSVELFLG
Ga0318529_100581801	3300031792	Soil	MTATQPGTRHQSGRFARIVRRVAGMVGEMNYAQQRSVELFLGLDE
Ga0318557_100274552	3300031795	Soil	MTATQPGTRHQSGRFARIVRRVAGVVGEMNYAQQRSVELFLGLDERPR
Ga0318557_105870482	3300031795	Soil	MTATQPGTHQSGRFARIVRRVTGVVEEMNYAQRRS
Ga0318523_103985502	3300031798	Soil	ATQPGTRHQSGRFARIVRRVAGMVGEMNYAQQRSVELFLGLDERAR
Ga0318511_101159713	3300031845	Soil	MTATQPGTHQSGRFARIVRRVAGVVEEMNYAQRRSVELFL
Ga0306919_101759892	3300031879	Soil	MTATQPGTHQSGRFARIVRRVAGVVEEMNYAQRRSVELFLGLDERH
Ga0306919_109268452	3300031879	Soil	MTATQPGTRHQSGRFARIVRRVASVVEEMNYAQRRSVELFLGLDERPR
Ga0306925_103286633	3300031890	Soil	MTAMQPGTHQSGRFARIVRRVAGVVEEMNYAQRRSVELFLGLDERR
Ga0318520_100644441	3300031897	Soil	MTATQPGTHQSGRFARIVRRVADVVEEMNYAQRRSVELFLGLD
Ga0310916_114729791	3300031942	Soil	MTATQPGTHQSGRFARIVRRVTGVVEEMNYAQRRSV
Ga0310913_111783641	3300031945	Soil	QPGTRHQSGRFARIVRRVASVVEEMNYAQRRSVELFLGLDERAR
Ga0310909_103054931	3300031947	Soil	AMTATQPGTHQSGRFARIVRRVAGVVEEMNYAQRRSVELFLGLDERR
Ga0318531_102338291	3300031981	Soil	MTATQPGTHQSGRFARIVRRVADVVEEMNYAQRRSVELFLGLDER
Ga0306922_102231683	3300032001	Soil	MTATQPGTHQSGRFARIVRRVAGVVEEMNYAQRRSVE
Ga0306922_114917901	3300032001	Soil	TRHQSGRFARIVRRVAGMVGEMNYAQQRSVELFLGLDERAR
Ga0318563_100327491	3300032009	Soil	MTAMQPGTHQSGRFARIVRRVAGVVEEMNYAQRRSVELFLGL
Ga0318563_105094051	3300032009	Soil	MTAMQPETHQSGRFARIVRRVADVVEEMNYAQRRSVELFLG
Ga0310911_106307611	3300032035	Soil	GASVMTAMQPGTHQSGRFARIVRRVADVVEEMNYAQRRSVELFLGLDERP
Ga0318559_101092073	3300032039	Soil	MTAMQPGTHQSGRFARIVRRVADVVEEMNYAQRRSVELFLGLDER
Ga0318556_100633573	3300032043	Soil	GASPMTATQPGTRHQSGRFARIVRRVAGVVGEMNYAQQRSVELFLGLDERAR
Ga0318506_100592803	3300032052	Soil	SVMTAMQPGTHQSGRFARIVRRVADVVEEMNYAQRRSVELFLGLDERP
Ga0318506_101782231	3300032052	Soil	MTATQPGTRHQSGRFARIVRRVASVVEEMNYAQRRSVELFLGLDERR
Ga0318570_101588882	3300032054	Soil	MTAMQPGTHQSGRFARIVRRVAGVVEEMNYAQRRSVELFLGLDERP
Ga0318575_102719151	3300032055	Soil	MTATQSGTRHQSGRFARIVRRVAGVVGEMNYAQQRSVELFLGLDERAR
Ga0318510_102768511	3300032064	Soil	MTATQQGTHQSGRFARIVRRVAGVVEEMNYAQRRSVELFLGLDERP
Ga0318514_100725323	3300032066	Soil	MTATQPGTHQSGRFARIVRRVADVVEEMNYAQRRSVELFLGLDERR
Ga0318514_103719882	3300032066	Soil	PGTRHQSGRFARIVRRVAGVVGEMNYAQQRSVELFLGLDERAR
Ga0318553_105189892	3300032068	Soil	MTATQPGTRHQSGRFARIVRRVAGMVGEMNYAQQR
Ga0306924_100966235	3300032076	Soil	MTATQPGTHQSGRFARIVRRVADVVEEMNYAQRRS
Ga0318577_104454051	3300032091	Soil	PGTHQSGRFARIVRRVAGVVEEMNYAQRRSVELFLGLDERH
Ga0307471_1040024842	3300032180	Hardwood Forest Soil	MTTMQPGTHQSGRFARIVRRVADVVDEMNYTQRRSVELFLGLDERR
Ga0306920_1001737295	3300032261	Soil	MQPGTHQSGRFARIVRRVADVVEEMNYAQRRSVELFLGLDERR
Ga0306920_1016397902	3300032261	Soil	MTATQQGTHQSGRFARIVRRVAGVVEEMNYAQRRSVELFLGLDERR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F061065

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences