NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F061060

Metagenome / Metatranscriptome Family F061060

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F061060
Family Type Metagenome / Metatranscriptome
Number of Sequences 132
Average Sequence Length 64 residues
Representative Sequence VINFFMAGPEMVRWELTAVESKGPYRLTVHHAQGVIVEYFETSAAALMREQELEDLLIAARGTSR
Number of Associated Samples 109
Number of Associated Scaffolds 132

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 30.30 %
% of genes near scaffold ends (potentially truncated) 40.91 %
% of genes from short scaffolds (< 2000 bps) 90.91 %
Associated GOLD sequencing projects 103
AlphaFold2 3D model prediction Yes
3D model pTM-score0.71

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (96.212 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(11.364 % of family members)
Environment Ontology (ENVO) Unclassified
(32.576 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(44.697 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 20.43%    β-sheet: 30.11%    Coil/Unstructured: 49.46%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.71
Powered by PDBe Molstar

Structural matches with SCOPe domains

SCOP familySCOP domainRepresentative PDBTM-score
d.297.1.1: WGR domaind2cr9a12cr90.73483
b.55.1.5: Third domain of FERMd2al6a22al60.70725
b.55.1.4: Enabled/VASP homology 1 domain (EVH1 domain)d1xoda11xod0.67249
b.55.1.10: SSRP1-liked4pq0a_4pq00.67007
b.55.1.0: automated matchesd5d3xa15d3x0.66521

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 132 Family Scaffolds
PF00072Response_reg 49.24
PF10431ClpB_D2-small 5.30
PF00989PAS 2.27
PF04116FA_hydroxylase 2.27
PF00383dCMP_cyt_deam_1 1.52
PF13545HTH_Crp_2 0.76
PF07883Cupin_2 0.76
PF03544TonB_C 0.76
PF14255Cys_rich_CPXG 0.76
PF14384BrnA_antitoxin 0.76
PF14534DUF4440 0.76
PF00571CBS 0.76

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 132 Family Scaffolds
COG3000Sterol desaturase/sphingolipid hydroxylase, fatty acid hydroxylase superfamilyLipid transport and metabolism [I] 2.27
COG0810Periplasmic protein TonB, links inner and outer membranesCell wall/membrane/envelope biogenesis [M] 0.76

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms96.21 %
UnclassifiedrootN/A3.79 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2124908032|Perma_A_C_ConsensusfromContig115535All Organisms → cellular organisms → Bacteria1339Open in IMG/M
2124908041|P3_CLC_ConsensusfromContig25736All Organisms → cellular organisms → Bacteria1096Open in IMG/M
3300000955|JGI1027J12803_105218009All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium533Open in IMG/M
3300004006|Ga0055453_10147150All Organisms → cellular organisms → Bacteria → Acidobacteria720Open in IMG/M
3300004479|Ga0062595_100182530All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1272Open in IMG/M
3300004479|Ga0062595_100570853All Organisms → cellular organisms → Bacteria → Acidobacteria872Open in IMG/M
3300004800|Ga0058861_11970635All Organisms → cellular organisms → Bacteria → Acidobacteria597Open in IMG/M
3300005093|Ga0062594_102006714All Organisms → cellular organisms → Bacteria → Acidobacteria618Open in IMG/M
3300005172|Ga0066683_10011711All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium4646Open in IMG/M
3300005293|Ga0065715_10222281All Organisms → cellular organisms → Bacteria → Acidobacteria1267Open in IMG/M
3300005295|Ga0065707_10264790All Organisms → cellular organisms → Bacteria → Acidobacteria1087Open in IMG/M
3300005338|Ga0068868_101352037All Organisms → cellular organisms → Bacteria → Acidobacteria663Open in IMG/M
3300005340|Ga0070689_101462903All Organisms → cellular organisms → Bacteria → Acidobacteria618Open in IMG/M
3300005355|Ga0070671_101546464Not Available587Open in IMG/M
3300005356|Ga0070674_101980339All Organisms → cellular organisms → Bacteria → Acidobacteria530Open in IMG/M
3300005438|Ga0070701_10813634All Organisms → cellular organisms → Bacteria → Acidobacteria638Open in IMG/M
3300005440|Ga0070705_100158057All Organisms → cellular organisms → Bacteria1512Open in IMG/M
3300005444|Ga0070694_100290574All Organisms → cellular organisms → Bacteria → Acidobacteria1249Open in IMG/M
3300005458|Ga0070681_11485949All Organisms → cellular organisms → Bacteria → Acidobacteria602Open in IMG/M
3300005536|Ga0070697_100918648All Organisms → cellular organisms → Bacteria777Open in IMG/M
3300005546|Ga0070696_100011938All Organisms → cellular organisms → Bacteria5822Open in IMG/M
3300005546|Ga0070696_101050247All Organisms → cellular organisms → Bacteria → Acidobacteria683Open in IMG/M
3300005548|Ga0070665_101530819All Organisms → cellular organisms → Bacteria → Acidobacteria675Open in IMG/M
3300005549|Ga0070704_100225502All Organisms → cellular organisms → Bacteria1526Open in IMG/M
3300005549|Ga0070704_101550544All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium610Open in IMG/M
3300005552|Ga0066701_10354281All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium909Open in IMG/M
3300005554|Ga0066661_10411649All Organisms → cellular organisms → Bacteria → Acidobacteria828Open in IMG/M
3300005576|Ga0066708_10704090All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium639Open in IMG/M
3300005764|Ga0066903_100002466All Organisms → cellular organisms → Bacteria14516Open in IMG/M
3300005841|Ga0068863_102236078All Organisms → cellular organisms → Bacteria → Acidobacteria557Open in IMG/M
3300005842|Ga0068858_101500970All Organisms → cellular organisms → Bacteria → Proteobacteria665Open in IMG/M
3300005842|Ga0068858_102208946All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium544Open in IMG/M
3300005843|Ga0068860_100538180All Organisms → cellular organisms → Bacteria1169Open in IMG/M
3300005843|Ga0068860_100599621All Organisms → cellular organisms → Bacteria1107Open in IMG/M
3300006046|Ga0066652_100331442All Organisms → cellular organisms → Bacteria1363Open in IMG/M
3300006176|Ga0070765_101941913All Organisms → cellular organisms → Bacteria → Acidobacteria551Open in IMG/M
3300006358|Ga0068871_100605135All Organisms → cellular organisms → Bacteria → Acidobacteria997Open in IMG/M
3300006358|Ga0068871_101467531All Organisms → cellular organisms → Bacteria → Acidobacteria644Open in IMG/M
3300006426|Ga0075037_1640561All Organisms → cellular organisms → Bacteria → Acidobacteria581Open in IMG/M
3300007258|Ga0099793_10656029Not Available528Open in IMG/M
3300009011|Ga0105251_10092225All Organisms → cellular organisms → Bacteria1391Open in IMG/M
3300009012|Ga0066710_103454532All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium599Open in IMG/M
3300009029|Ga0066793_10460334All Organisms → cellular organisms → Bacteria → Acidobacteria728Open in IMG/M
3300009088|Ga0099830_10860785All Organisms → cellular organisms → Bacteria → Acidobacteria749Open in IMG/M
3300009089|Ga0099828_10696792All Organisms → cellular organisms → Bacteria912Open in IMG/M
3300009090|Ga0099827_10007010All Organisms → cellular organisms → Bacteria → Proteobacteria6960Open in IMG/M
3300009090|Ga0099827_11909360All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium517Open in IMG/M
3300009098|Ga0105245_10807269All Organisms → cellular organisms → Bacteria976Open in IMG/M
3300009176|Ga0105242_10912994All Organisms → cellular organisms → Bacteria → Acidobacteria879Open in IMG/M
3300009176|Ga0105242_12226229All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria594Open in IMG/M
3300009177|Ga0105248_10405529All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes1535Open in IMG/M
3300009177|Ga0105248_10476716All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1406Open in IMG/M
3300009177|Ga0105248_13412300All Organisms → cellular organisms → Bacteria → Acidobacteria505Open in IMG/M
3300009553|Ga0105249_10871482All Organisms → cellular organisms → Bacteria967Open in IMG/M
3300009649|Ga0105855_1014535All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium2332Open in IMG/M
3300009662|Ga0105856_1010034All Organisms → cellular organisms → Bacteria2922Open in IMG/M
3300010147|Ga0126319_1178870All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium650Open in IMG/M
3300010304|Ga0134088_10420780All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium653Open in IMG/M
3300010323|Ga0134086_10194743All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium755Open in IMG/M
3300010333|Ga0134080_10556501All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium552Open in IMG/M
3300010366|Ga0126379_10594281All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1191Open in IMG/M
3300010397|Ga0134124_12243849All Organisms → cellular organisms → Bacteria → Acidobacteria586Open in IMG/M
3300010399|Ga0134127_11009362All Organisms → cellular organisms → Bacteria → Acidobacteria892Open in IMG/M
3300010400|Ga0134122_10101201All Organisms → cellular organisms → Bacteria → Acidobacteria2282Open in IMG/M
3300010400|Ga0134122_11844856Not Available638Open in IMG/M
3300010400|Ga0134122_12197040All Organisms → cellular organisms → Bacteria → Acidobacteria595Open in IMG/M
3300010400|Ga0134122_12531023All Organisms → cellular organisms → Bacteria → Acidobacteria563Open in IMG/M
3300010401|Ga0134121_10888917Not Available864Open in IMG/M
3300010403|Ga0134123_12509110All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium582Open in IMG/M
3300011119|Ga0105246_10114320All Organisms → cellular organisms → Bacteria → Acidobacteria1988Open in IMG/M
3300012203|Ga0137399_10227672All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1522Open in IMG/M
3300012208|Ga0137376_10142137All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium2060Open in IMG/M
3300012208|Ga0137376_10594076All Organisms → cellular organisms → Bacteria → Acidobacteria958Open in IMG/M
3300012363|Ga0137390_10349014All Organisms → cellular organisms → Bacteria1460Open in IMG/M
3300012392|Ga0134043_1122088All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium811Open in IMG/M
3300012469|Ga0150984_114889584All Organisms → cellular organisms → Bacteria → Acidobacteria628Open in IMG/M
3300012923|Ga0137359_11724930Not Available513Open in IMG/M
3300012930|Ga0137407_11300764All Organisms → cellular organisms → Bacteria691Open in IMG/M
3300012944|Ga0137410_11444923All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium599Open in IMG/M
3300012976|Ga0134076_10258792All Organisms → cellular organisms → Bacteria → Acidobacteria744Open in IMG/M
3300015192|Ga0167646_1084335All Organisms → cellular organisms → Bacteria676Open in IMG/M
3300015264|Ga0137403_10466233All Organisms → cellular organisms → Bacteria → Acidobacteria1137Open in IMG/M
3300015371|Ga0132258_13096605All Organisms → cellular organisms → Bacteria1150Open in IMG/M
3300018027|Ga0184605_10088289All Organisms → cellular organisms → Bacteria1358Open in IMG/M
3300018028|Ga0184608_10092462All Organisms → cellular organisms → Bacteria1254Open in IMG/M
3300018061|Ga0184619_10215362All Organisms → cellular organisms → Bacteria → Acidobacteria883Open in IMG/M
3300018071|Ga0184618_10243832All Organisms → cellular organisms → Bacteria → Acidobacteria759Open in IMG/M
3300018076|Ga0184609_10174898All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium995Open in IMG/M
3300018433|Ga0066667_10756395All Organisms → cellular organisms → Bacteria821Open in IMG/M
3300018476|Ga0190274_10979573All Organisms → cellular organisms → Bacteria → Acidobacteria918Open in IMG/M
3300018476|Ga0190274_11284977All Organisms → cellular organisms → Bacteria → Acidobacteria818Open in IMG/M
3300018482|Ga0066669_10109527All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1940Open in IMG/M
3300021073|Ga0210378_10085119All Organisms → cellular organisms → Bacteria → Acidobacteria1236Open in IMG/M
3300021078|Ga0210381_10221738All Organisms → cellular organisms → Bacteria → Acidobacteria665Open in IMG/M
3300021080|Ga0210382_10093223All Organisms → cellular organisms → Bacteria → Acidobacteria1247Open in IMG/M
3300025556|Ga0210120_1092518All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium600Open in IMG/M
3300025910|Ga0207684_10591549All Organisms → cellular organisms → Bacteria → Acidobacteria948Open in IMG/M
3300025925|Ga0207650_10722812All Organisms → cellular organisms → Bacteria842Open in IMG/M
3300025927|Ga0207687_11105979All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium681Open in IMG/M
3300025936|Ga0207670_10939463All Organisms → cellular organisms → Bacteria726Open in IMG/M
3300025941|Ga0207711_10664845All Organisms → cellular organisms → Bacteria → Acidobacteria972Open in IMG/M
3300025942|Ga0207689_10228588All Organisms → cellular organisms → Bacteria → Acidobacteria1538Open in IMG/M
3300026216|Ga0209903_1031524All Organisms → cellular organisms → Bacteria → Acidobacteria821Open in IMG/M
3300026222|Ga0209862_1061233All Organisms → cellular organisms → Bacteria → Acidobacteria659Open in IMG/M
3300026275|Ga0209901_1037838All Organisms → cellular organisms → Bacteria → Acidobacteria1115Open in IMG/M
3300026324|Ga0209470_1014705All Organisms → cellular organisms → Bacteria4467Open in IMG/M
3300027835|Ga0209515_10014218All Organisms → cellular organisms → Bacteria8257Open in IMG/M
3300027882|Ga0209590_10936388All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium544Open in IMG/M
3300028381|Ga0268264_11315451All Organisms → cellular organisms → Bacteria → Acidobacteria733Open in IMG/M
3300028381|Ga0268264_11826855All Organisms → cellular organisms → Bacteria → Acidobacteria618Open in IMG/M
3300028799|Ga0307284_10207633All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium771Open in IMG/M
3300028799|Ga0307284_10331959All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium614Open in IMG/M
3300028807|Ga0307305_10152144All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1068Open in IMG/M
3300028828|Ga0307312_10072487All Organisms → cellular organisms → Bacteria → Acidobacteria2092Open in IMG/M
3300028828|Ga0307312_10143334All Organisms → cellular organisms → Bacteria1511Open in IMG/M
3300030521|Ga0307511_10401633All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium563Open in IMG/M
3300030902|Ga0308202_1092131All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium615Open in IMG/M
3300030990|Ga0308178_1103851All Organisms → cellular organisms → Bacteria → Acidobacteria607Open in IMG/M
3300030990|Ga0308178_1105904All Organisms → cellular organisms → Bacteria → Acidobacteria602Open in IMG/M
3300030993|Ga0308190_1079218All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium687Open in IMG/M
3300031092|Ga0308204_10192081All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium632Open in IMG/M
3300031093|Ga0308197_10286258All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium601Open in IMG/M
3300031099|Ga0308181_1117907All Organisms → cellular organisms → Bacteria → Acidobacteria591Open in IMG/M
3300031231|Ga0170824_124811943All Organisms → cellular organisms → Bacteria → Acidobacteria621Open in IMG/M
3300031366|Ga0307506_10498713All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium516Open in IMG/M
3300031720|Ga0307469_11748525All Organisms → cellular organisms → Bacteria → Acidobacteria600Open in IMG/M
3300031834|Ga0315290_10192905All Organisms → cellular organisms → Bacteria1768Open in IMG/M
3300032163|Ga0315281_10186665All Organisms → cellular organisms → Bacteria2321Open in IMG/M
3300032163|Ga0315281_10343845All Organisms → cellular organisms → Bacteria1619Open in IMG/M
3300032163|Ga0315281_10794827All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium976Open in IMG/M
3300032163|Ga0315281_11620044All Organisms → cellular organisms → Bacteria → Acidobacteria630Open in IMG/M
3300032163|Ga0315281_11986079All Organisms → cellular organisms → Bacteria → Acidobacteria556Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil11.36%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil10.61%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere6.82%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil6.06%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil5.30%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere5.30%
SedimentEnvironmental → Aquatic → Freshwater → Lake → Sediment → Sediment4.55%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere4.55%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment3.79%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil3.79%
Permafrost SoilEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil3.79%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere3.79%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment2.27%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil2.27%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil2.27%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere2.27%
Natural And Restored WetlandsEnvironmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands1.52%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Soil1.52%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere1.52%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere1.52%
Miscanthus RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere1.52%
SoilEnvironmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil0.76%
GroundwaterEnvironmental → Aquatic → Freshwater → Groundwater → Contaminated → Groundwater0.76%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil0.76%
Glacier Forefield SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil0.76%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere0.76%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil0.76%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil0.76%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Soil0.76%
Prmafrost SoilEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil0.76%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil0.76%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil0.76%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere0.76%
Host-AssociatedHost-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated0.76%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere0.76%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere0.76%
EctomycorrhizaHost-Associated → Plants → Roots → Unclassified → Unclassified → Ectomycorrhiza0.76%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere0.76%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere0.76%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2124908032Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Perma_allEnvironmentalOpen in IMG/M
2124908041Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Permafrost Layer P3EnvironmentalOpen in IMG/M
3300000955Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300004006Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Goodyear_PhragA_D2EnvironmentalOpen in IMG/M
3300004479Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAsEnvironmentalOpen in IMG/M
3300004800Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-1 (Metagenome Metatranscriptome)Host-AssociatedOpen in IMG/M
3300005093Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All BlocksEnvironmentalOpen in IMG/M
3300005172Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132EnvironmentalOpen in IMG/M
3300005293Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1Host-AssociatedOpen in IMG/M
3300005295Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3EnvironmentalOpen in IMG/M
3300005338Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2Host-AssociatedOpen in IMG/M
3300005340Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaGEnvironmentalOpen in IMG/M
3300005355Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaGHost-AssociatedOpen in IMG/M
3300005356Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaGHost-AssociatedOpen in IMG/M
3300005438Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaGEnvironmentalOpen in IMG/M
3300005440Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaGEnvironmentalOpen in IMG/M
3300005444Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaGEnvironmentalOpen in IMG/M
3300005458Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaGEnvironmentalOpen in IMG/M
3300005536Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaGEnvironmentalOpen in IMG/M
3300005546Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaGEnvironmentalOpen in IMG/M
3300005548Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaGHost-AssociatedOpen in IMG/M
3300005549Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaGEnvironmentalOpen in IMG/M
3300005552Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150EnvironmentalOpen in IMG/M
3300005554Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110EnvironmentalOpen in IMG/M
3300005576Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157EnvironmentalOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300005841Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2Host-AssociatedOpen in IMG/M
3300005842Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2Host-AssociatedOpen in IMG/M
3300005843Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2Host-AssociatedOpen in IMG/M
3300006046Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101EnvironmentalOpen in IMG/M
3300006176Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5EnvironmentalOpen in IMG/M
3300006358Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2Host-AssociatedOpen in IMG/M
3300006426Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate RNA 2013_054 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300007258Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3EnvironmentalOpen in IMG/M
3300009011Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaGHost-AssociatedOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009029Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 1 DNA2013-189EnvironmentalOpen in IMG/M
3300009088Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaGEnvironmentalOpen in IMG/M
3300009089Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaGEnvironmentalOpen in IMG/M
3300009090Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaGEnvironmentalOpen in IMG/M
3300009098Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaGHost-AssociatedOpen in IMG/M
3300009176Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaGHost-AssociatedOpen in IMG/M
3300009177Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaGHost-AssociatedOpen in IMG/M
3300009553Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaGHost-AssociatedOpen in IMG/M
3300009649Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-059EnvironmentalOpen in IMG/M
3300009662Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-060EnvironmentalOpen in IMG/M
3300010147Soil microbial communities from California, USA to study soil gas exchange rates - BB-CA-RED metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010304Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015EnvironmentalOpen in IMG/M
3300010323Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300010333Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300010366Tropical forest soil microbial communities from Panama - MetaG Plot_24EnvironmentalOpen in IMG/M
3300010397Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4EnvironmentalOpen in IMG/M
3300010399Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3EnvironmentalOpen in IMG/M
3300010400Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2EnvironmentalOpen in IMG/M
3300010401Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1EnvironmentalOpen in IMG/M
3300010403Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3EnvironmentalOpen in IMG/M
3300011119Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaGHost-AssociatedOpen in IMG/M
3300012203Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaGEnvironmentalOpen in IMG/M
3300012208Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012363Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaGEnvironmentalOpen in IMG/M
3300012392Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_4_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012469Combined assembly of Soil carbon rhizosphereHost-AssociatedOpen in IMG/M
3300012923Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaGEnvironmentalOpen in IMG/M
3300012930Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012944Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012976Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaGEnvironmentalOpen in IMG/M
3300015192Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-2a, rock/snow interface)EnvironmentalOpen in IMG/M
3300015264Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300018027Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coexEnvironmentalOpen in IMG/M
3300018028Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coexEnvironmentalOpen in IMG/M
3300018061Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1EnvironmentalOpen in IMG/M
3300018071Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1EnvironmentalOpen in IMG/M
3300018076Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coexEnvironmentalOpen in IMG/M
3300018433Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116EnvironmentalOpen in IMG/M
3300018476Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 TEnvironmentalOpen in IMG/M
3300018482Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118EnvironmentalOpen in IMG/M
3300021073Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_b1 redoEnvironmentalOpen in IMG/M
3300021078Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_coex redoEnvironmentalOpen in IMG/M
3300021080Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redoEnvironmentalOpen in IMG/M
3300025556Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Goodyear_PhragA_D2 (SPAdes)EnvironmentalOpen in IMG/M
3300025910Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025925Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025927Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025936Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025941Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025942Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026216Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil leachate replicate DNA2013-051 (SPAdes)EnvironmentalOpen in IMG/M
3300026222Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-061 (SPAdes)EnvironmentalOpen in IMG/M
3300026275Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-058 (SPAdes)EnvironmentalOpen in IMG/M
3300026324Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)EnvironmentalOpen in IMG/M
3300027835Subsurface groundwater microbial communities from S. Glens Falls, New York, USA - GMW60B uncontaminated upgradient, 5.4 m (SPAdes)EnvironmentalOpen in IMG/M
3300027882Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300028381Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300028799Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_123EnvironmentalOpen in IMG/M
3300028807Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186EnvironmentalOpen in IMG/M
3300028828Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202EnvironmentalOpen in IMG/M
3300030521Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EMHost-AssociatedOpen in IMG/M
3300030902Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_356 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300030990Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_149 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300030993Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_185 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031092Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_367 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031093Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_198 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031099Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_152 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031231Coassembly Site 11 (all samples) - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031366Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 25_SEnvironmentalOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M
3300031834Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G12_0EnvironmentalOpen in IMG/M
3300032163Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G07_0EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
Perma_A_C_021406402124908032SoilVINFFMAGPEMVRWELTAVESKGPYRLTVHHAQGVIVEYFETSAAALMREQELEDLLIAARGTSR
P3_CLC_020411802124908041SoilVINFFMAGPEMVRWELTAVESKGPYRLTVHHAQGVIVEYFETSAAALMREQELEDL
JGI1027J12803_10521800913300000955SoilMNMFVAGAELVRWELTAVTREGPYRLTMHHAHGSIVEYFRDIAAALTREAELEALLKVAGTH
Ga0055453_1014715013300004006Natural And Restored WetlandsMAGPDLVRWELTQVDQGACRLTVQHAHGTIVEYFTSPTAALLREKELEDLLLAARGALEAGAGR*
Ga0062595_10018253013300004479SoilMVRWSLTAVDAHGPYRLSVHHCHGVIVEYFKTSSSALLRQHELEDLLIAA
Ga0062595_10057085313300004479SoilMAGPDMVRCELTVESDGPYCLTVRHAQGVIVEYFQTSAAALLRQQELQDLLMAARGAVLRK*
Ga0058861_1197063513300004800Host-AssociatedLDCEQPGVINFFMAGPEMVRWELTAVDSNGPYRLTVHHAQGVIVEYFETSAAALMREQELEDLLIAARGTKR*
Ga0062594_10200671413300005093SoilMVRWELTAVAANGPFRLAVHHSQGTIVEYFEKSAAALVREQELEELLIAARGTRR*
Ga0066683_1001171163300005172SoilMAGPELVRWDLIALETTGPYRLTVHHAQGVIVEYFTTPAAALRRQHELEDLLIAARGVVAV*
Ga0065715_1022228123300005293Miscanthus RhizosphereVLNFFMAGPEMVRWSLTAVDAHGPYRLSVHHCHGVIVEYFKTSSSALLRQHELEDLLIAARGSVHSTDTR*
Ga0065707_1026479023300005295Switchgrass RhizosphereVLSFFMAGPDMVRWELTVDPNGSFRLTVRHAQGVIIEYFQTSAAALLRQQELEDLLIAARGGDEDAHFAAVLAR*
Ga0068868_10135203713300005338Miscanthus RhizosphereMAGPEMVRWSLTAVDMHGPYRLTVHHCHGVIVEYFKTSSSALLRQHELEDLLIAARGSVSSADSR*
Ga0070689_10146290313300005340Switchgrass RhizosphereMVRWELPAVAANGPFRLAVHHSQGTIVEYFEKSAAALVREQELEELLIAARGTRR*
Ga0070671_10154646423300005355Switchgrass RhizosphereVLSFFMAGPDMVRCELTVESDGPFCLTVRHAQGVIVEYFQTSAAALLRQQELQDLLMAARGALSRK*
Ga0070674_10198033913300005356Miscanthus RhizospherePELVRWELTAMESDGPYRLIVRHAQGVIVEYFSTSAAALLRQHELEDLLIAARGTITHS*
Ga0070701_1081363413300005438Corn, Switchgrass And Miscanthus RhizosphereFFMAGPELVRWELTAMESDGPYRLIVRHAQGVIVEYFSTSAAALLRQHELEDLLIAARGTITHS*
Ga0070705_10015805733300005440Corn, Switchgrass And Miscanthus RhizosphereMAGPEIVRWSLTAVEADGPYRLAVHHCHGVIVEYFKTPSSALLRQHELEDLLIAARGSVYSSGPR*
Ga0070694_10029057423300005444Corn, Switchgrass And Miscanthus RhizosphereMAGPELVRWELTAMESDGPYRLIVRHAQGVIVEYFSTSAAALLRQHELEDLLIAARGTITHS*
Ga0070681_1148594923300005458Corn RhizosphereCEQPGVINFFMAGPEMVRWELTAVDSNGPYRLTVHHAQGVIVEYFETSAAALMREQELEDLLIAARGTKR*
Ga0070697_10091864823300005536Corn, Switchgrass And Miscanthus RhizosphereMVRWELTAVAANGPFRLAVHHSQGTIVEYFEKSAAALVREQELEELLIA
Ga0070696_10001193873300005546Corn, Switchgrass And Miscanthus RhizosphereVLSFFMAGPEMVRWDLTVESSGQFRLTVRHSQGMIVEYFRTSAAALLREQELEDLLIAARGGDVDAYPATVAAR*
Ga0070696_10105024723300005546Corn, Switchgrass And Miscanthus RhizosphereTAVEADGPYRLAVHHCHGVIVEYFKTPSSALLRQHELEDLLIAARGSVYSSGPR*
Ga0070665_10153081923300005548Switchgrass RhizosphereMAGPELVRWELTAMESDGPYRLIVRHAQGVIVEYFSTSAAALLRQHELEDLLIAARG
Ga0070704_10022550213300005549Corn, Switchgrass And Miscanthus RhizosphereMAGPEIVRWSLTAVEADGPYRLAVHHCHGVIVEYFKTPSSALLRQHE
Ga0070704_10155054423300005549Corn, Switchgrass And Miscanthus RhizosphereMKNVLNFFMAGAEMVRWNLTAVEADGPYRLTLHHCHGVIVEYFKTSDSALVRQHELEDLFIAAR
Ga0066701_1035428123300005552SoilLVRWDLIALETTGPYRLTVHHAHGVIVEYFSSPAAALRRQHELEDLLIAARGVVAVR*
Ga0066661_1041164923300005554SoilVINFFMAGPEMVRWELTAMESNGPFRLAVHHAMGVIVEYFETPAAALMRERELEDLLIAARGTSR*
Ga0066708_1070409013300005576SoilVLNFFMAGPELVRWDLIALETTGPYRLTVHHAQGVIVEYFTTPAAALRRQHELEDLLIAARGVVAV*
Ga0066903_10000246643300005764Tropical Forest SoilMLNFFRAGPELVRWELTLVEPRDTYRLTIHHARGVIVEYFTTAAAALMRERELETLLIAARGGVPTRALAS*
Ga0068863_10223607813300005841Switchgrass RhizosphereGIGLAKRSRMGNCFMAGAEMVRWELTAVAANGPFRLAVHHSQGTIVEYFEKSAAALVREQELEELLIAARGTRR*
Ga0068858_10150097023300005842Switchgrass RhizosphereVVNFFMAGSEMVRWNLTAVESDGPYRLTLHHSHGMIVEYFKTADSALLRQHELEDLLIAARVR*
Ga0068858_10220894613300005842Switchgrass RhizosphereMRIVLNFFMAGPELVRWSLTAVEADGPYRLAVHHCHGVIVEYFKTPSSALMRQHELEDLLIAARGSAYSAGAR*
Ga0068860_10053818023300005843Switchgrass RhizosphereMAGPEMVRWELTAVESNGPFRLIVHHAQGVIVEYFETSAAALMREQELEDLLVAARGNRR
Ga0068860_10059962113300005843Switchgrass RhizosphereMGNCFMAGAEMVRWELTAMAASGPYRLTVHHSQGTIVEYFEESAAALVREQELEGLLIAARGMGR*
Ga0066652_10033144233300006046SoilMAGPELVRWDLIALETTGPYRLTVHHAQGVIVEYFTTPAAALRRQHELEDLLIAA
Ga0070765_10194191313300006176SoilGTGLASATFVINFFMAGPDMVRWELTAVESNGPFRLIVHHVHGVIVEYFETSAAALMREQELEDLLIAARGGSR*
Ga0068871_10060513513300006358Miscanthus RhizosphereVLSFFMAGPDMVRCELTVESDGPFCLTVRHAQGVIVEYFQTSAAALLRQQELQDLLMAARGAVARK*
Ga0068871_10146753113300006358Miscanthus RhizosphereVINFFMAGPEVVRWELTAVESNGPYRLTVHHAHGVIVEYFDTSAAALMREQELEDLLTAARGTS*
Ga0075037_164056113300006426Permafrost SoilLIAVDSDGPYRLTVHHAQGVIVEYFETSAAALMREQELEDLLIAARGAR*
Ga0099793_1065602913300007258Vadose Zone SoilVLNFFMAGSEIVRWSLTAVEADGPYRLAVHHCHGVIVEYFKTPSSALLRQHELEDLLIAARGSVYSADT
Ga0105251_1009222523300009011Switchgrass RhizosphereMGNCFMAGAEMVRWDLTAVASNGLFRLTLHHSQGTIVEYFQKTAAALVREQELEGLLIAARGMGR*
Ga0066710_10345453223300009012Grasslands SoilFMAGPELVRWDLIALETTGPYRLTVHHAQGVIVEYFTTPAAALRRQHELEDLLIAARGVVAV
Ga0066793_1046033423300009029Prmafrost SoilVTNFFMAGRETVRWELTAVESNGPLRLTVQHSTGVIVEYFETSAAALMREQELEDLLIAARGTSR*
Ga0099830_1086078523300009088Vadose Zone SoilWPGIRLAIRASVLNFFMAGPELVRWDLIALETTGPYRLTVHHAHGVIVEYFSSPAAALRRQHELEDLLIAARGVVAVR*
Ga0099828_1069679213300009089Vadose Zone SoilVLNFFMAGPELVRWDLIALETTGPYRLTVHHAHGVIVEYFSSPAAALRRQHELEDLLIAA
Ga0099827_1000701073300009090Vadose Zone SoilMAGPELVRWDLIALETTGPYRLTVHHAHGVIVEYFSSPAAALRRQHELEDLLIAARGVVAVR*
Ga0099827_1190936023300009090Vadose Zone SoilVLNFFMAGPELVRWDLIALETTGPYRLTVHHAHGVIVEYFSSPAAALRRQHELEDLLIAARGVVAVR*
Ga0105245_1080726923300009098Miscanthus RhizosphereVINFFMAGPEMVRWELTAVESNGPFRLIVHHAQGVIVEYFETSAAALMREQELEDLLVAARGNRR*
Ga0105242_1091299423300009176Miscanthus RhizosphereVLSFFMAGPDMVRCELTVESDGPYCLTVRHAQGVIVEYFQTSAAALLRQQELQDLLMAARGAVARK*
Ga0105242_1222622923300009176Miscanthus RhizosphereLARGKAVLSFFMAGPDMVRCELTVESDGPFCLTVRHAQGVIVEYFQTSAAALLRQQELQDLLMAARGAVARQ*
Ga0105248_1040552913300009177Switchgrass RhizosphereVLSFFMAGPDMVRCELTVESDGPYCLTVRHAQGVIVEYFQTSAAALLRQQELQDLLMAARGAVLRK*
Ga0105248_1047671623300009177Switchgrass RhizosphereVINFFMAGPEMVRWELTAVESQGPYRLTVHHKHGVIVEYFDTSAAALMREQELEDLLIAARGASR*
Ga0105248_1341230023300009177Switchgrass RhizosphereGPDMVRCELTVESDGPYCLTVRHAQGVIVEYFQTSAAALLRQQELQDLLMAARGALLRK*
Ga0105249_1087148223300009553Switchgrass RhizosphereMGNCFMAGAEMVRWELTAVAANGPFRLAVHHSQGTIVEYFEKSAAALVREQELEGLLIAARGMGR*
Ga0105855_101453523300009649Permafrost SoilVINFFMAGPEMVRWELIAVDSDGPYRLTVHHAQGVIVEYFETSAAALMREQELEDLLIAARGAR*
Ga0105856_101003423300009662Permafrost SoilVINFFMAGPEMVRWELIAVDSDGPYRLTVHHAQGVIVEYFETSAAALMREQELEDLLIAAREAR*
Ga0126319_117887013300010147SoilVLNFFMAGPELVRWSLTAVEADGPYRLAVHHCHGVIVEYFKTPSSALLRQHELEDLLIAA
Ga0134088_1042078013300010304Grasslands SoilVLSFFMAGPELVRWDLIALETTGPYRLTVHHAQGVIVEYFTTPAAALRRQHELEDLLIAARGVVAV*
Ga0134086_1019474323300010323Grasslands SoilLIALETTGPYRLTVHHAQGVIVEYFTTPAAALRRQHELEDLLIAARGVVAV*
Ga0134080_1055650113300010333Grasslands SoilMAGPELVRWDLIALETTGPYRLTVPHAQGVIVEYFTTPAAALRRQHELEDLLIAARGVVAV*
Ga0126379_1059428123300010366Tropical Forest SoilMLNFFRAGPELVRWELTLVEPRDTYRLTIHHARGVIVEYFTTAAAALTRERELETLLIAARGGVPTALAS*
Ga0134124_1224384923300010397Terrestrial SoilNFFMAGPELVRWSLTAVEADGPYRLAVHHCHGVIVEYFKTPSSALLRQHELEDLLIAARGSVYSSGTR*
Ga0134127_1100936233300010399Terrestrial SoilVLNFFMAGPEIVRWSLTAVEADGPYRLAVHHCHGVIVEYFKTPSSALLRQHELEDLLIAARGSVYSSGPR*
Ga0134122_1010120133300010400Terrestrial SoilVLSFFMAGPDMVRWELTVDPNGSYRLTVRHAQGVIIEYFQTSAAALLRQQELEDLLIAARGGDEDGHFATVLAR*
Ga0134122_1184485613300010400Terrestrial SoilVLNFFMAGPEMVRWSLTAVEADGPYRLAVHHCHGVIVEYFKTPSSALLRQHELEDLLIAARGSV
Ga0134122_1219704023300010400Terrestrial SoilSVLNFFMAGPELVKWDLIALETTGPYRLTVHHAQGVIVEYFSTPAAALRRQHELEDLLIAARGVVAVR*
Ga0134122_1253102323300010400Terrestrial SoilDGPYRLAVHHCHGVIVEYFKTSSSALTRQHELEDLLIAARGSAYSACIR*
Ga0134121_1088891723300010401Terrestrial SoilVLNFFMAGPEMVRWSLTAVEADGPYRLAVHHCHGVIVEYFKTPSSALLRQHELEDLLIAARGSVYSSGTR*
Ga0134123_1250911023300010403Terrestrial SoilVLNFFMAGPELVRWSLTAVEADGPYRLAVHHCHGVIVEYFKTPSSALLRQHELEDLLIAARGSVYSSGPR*
Ga0105246_1011432033300011119Miscanthus RhizosphereMGNCFMAGAEMVRWELTAVAANGPFRLAVHHSQGTIVEYFEKSAAALVREQELEELLIAARGTRR*
Ga0137399_1022767233300012203Vadose Zone SoilVLNFFMAGSEIVRWSLTAVEADGPYRLAVHHCHGVIVEYFKTPSSALLRQHELEDLLIAARGSVYSADTQ*
Ga0137376_1014213733300012208Vadose Zone SoilVLNFFMAGSEMVRWSLTAVEADGPYRLAVHHCHGVIVEYFKTPSSALLRQHELEDLLIAARGSDYSAGTR*
Ga0137376_1059407613300012208Vadose Zone SoilVLNFFMAGPEMVRWSLTAVDAHGPYRLSVHHSHGVIVEYFKTSSSALLRQHELEDLLIAARGSVHSTDTR*
Ga0137390_1034901433300012363Vadose Zone SoilVLNFFMAGPELVRWDLIALETTGPYRLTVHHAHGVIVEYFSSPAVALRRQHELEVLLIAARGVVAVR*
Ga0134043_112208823300012392Grasslands SoilRWDLIALETTGPYRLTVHHAQGVIVEYFTTPAAALRRQHELEDLLIAARGVVAV*
Ga0150984_11488958423300012469Avena Fatua RhizosphereRPGTWIANGCGVINFFMAGPEMVRWELTAVDSNGPYRLTVHHAQGVIVEYFETSAAALMRQQELEDLLIAARGAKR*
Ga0137359_1172493013300012923Vadose Zone SoilVLNFFMAGPEMVRWSLTAVDAHGPYRLSVHHCHGVIVEYFKTPSSALLRQHELEDLLIAARGSVHSA
Ga0137407_1130076413300012930Vadose Zone SoilVINFFMAGPEMVRWELTAVESNGPFRLIVHHAQGVIVEYFETSAAALMREQELEDLLIAARGSRR*
Ga0137410_1144492323300012944Vadose Zone SoilVINFFMAGPEMVRWELTAVESNGPFRLAVHHAMGVIVEYFETPAAALMREQELENLLIAARGTSR*
Ga0134076_1025879213300012976Grasslands SoilMAGAELVRWDLIALETTGPYRLTVHHAQGVIVEYFTTPAAALRRQHELEDLLIAARGVVAV*
Ga0167646_108433523300015192Glacier Forefield SoilVINFFMAGPEVVRWELTAVDANGPYRLTVHHAQGVIVEYFETSAAAMMREQELEDLLIAARGTRR*
Ga0137403_1046623343300015264Vadose Zone SoilELLAVESQSAYKLTVHHAHGVIVEYFRTSAAALTRQHELEDLLRAARGGVAIR*
Ga0132258_1309660523300015371Arabidopsis RhizosphereMLNFFMAGPELVRWELTLVEPHDTYRLTIHHARGVIVEYFTTAAAALLRERELETLLIAARGGVPTSLAS*
Ga0184605_1008828913300018027Groundwater SedimentIVLNFFMAGSEMVRWSLTAVDSHGPYRLTVHHCHGVIVEYFKTSSSALLRQHELEDLLIAARGSVSSADIR
Ga0184608_1009246213300018028Groundwater SedimentWSLTAVDAHGPYRLSVHHSHGVIVEYFKTSSSALLRQHELEDLLIAARGSVHSTDTR
Ga0184619_1021536223300018061Groundwater SedimentVLNFFMAGSEMVRWSLTAVEADGPYRLAIHHCHGVIVEYFKTPSSALLRQHELEDLLIAARGSVSSADIR
Ga0184618_1024383213300018071Groundwater SedimentVLSFFMAGPELVRWELTVETNGSFRLTVRHAHGVIIEYFQTSASALLRQQELEDLLIAARGG
Ga0184609_1017489823300018076Groundwater SedimentVLSFFMAGPDMVRWELTVEPNGSYRLTVRHAQGVIIEYFQTSAGALLRQQELEDLLIAARGGDEDAHFATVLAR
Ga0066667_1075639533300018433Grasslands SoilMAGPELVRWDLIALETTGPYRLTVHHAQGVIVEYFTTPAAALRRQHELEDLL
Ga0190274_1097957333300018476SoilMAGPELVRWELTAMESDGPYRLIVRHAQGVIVEYFSTSAAALLRQQELEDLLIAARGTITHS
Ga0190274_1128497713300018476SoilMKAGTLLAEEGAVLSFFMAGPEMVQWELTVDANGPYRLTVRHAHGVIVEYFQTSAAALLRQQELEDLLIAARGSL
Ga0066669_1010952733300018482Grasslands SoilVLNFFMAGPELVRWDLIALETTGPYRLTVHHAHGVIVEYFSSPAAALRRQHELEDLLIAARGVVAVR
Ga0210378_1008511933300021073Groundwater SedimentVLSFFMAGPDMVRWELTIEPNGSYRLTVRHAQGVIIEYFQTSAGALLRQQELEDLLIAARGGDEDAHFATVLAR
Ga0210381_1022173813300021078Groundwater SedimentTAVDSHGPYRLTVHHCHGVIVEYFKTSSSALLRQHELEDLLIAARGSVSSADIR
Ga0210382_1009322323300021080Groundwater SedimentMAGSEMVRWSLTAVEADGPYRLAVHHSHGVIVEYFKTPSSALLRQHELEDLLIAARGSVYSAGTR
Ga0210120_109251823300025556Natural And Restored WetlandsMAGPDLVRWELTQVDQGACRLTVQHAHGTIVEYFTSPTAALLREKELEDLLLAARGALEAGAGR
Ga0207684_1059154923300025910Corn, Switchgrass And Miscanthus RhizosphereMAGPEIVRWSLTAVEADGPYRLAVHHCHGVIVEYFKTPSSALLRQHELEDLLIAARGSVYSSGPR
Ga0207650_1072281213300025925Switchgrass RhizosphereMAGAEMVRWELTAVAANGPFRLAVHHSQGTIVEYFEKSAAALVREQELEELLIAARGTRR
Ga0207687_1110597913300025927Miscanthus RhizosphereMAGSEMVRWNLTAVESDGPYRLTLHHSHGMIVEYFKTADSALLRQHELEDLLIAARVR
Ga0207670_1093946323300025936Switchgrass RhizosphereMVRWELPAVAANGPFRLAVHHSQGTIVEYFEKSAAALVREQELEELLIAARGTRR
Ga0207711_1066484523300025941Switchgrass RhizosphereVVNFFMAGSEMVRWNLTAVESDGPYRLTLHHSHGMIVEYFKTADSALLRQHELEDLLIAARVR
Ga0207689_1022858823300025942Miscanthus RhizosphereMVRWELTAVAANGPFRLAVHHSQGTIVEYFEKSAAALVREQELEELLIAARGTRR
Ga0209903_103152423300026216SoilMAGPEMVRWELIAVDSDGPYRLTVHHAQGVIVEYFETSAAALMREQELEDLLIAARGAR
Ga0209862_106123313300026222Permafrost SoilPSLVINFFMAGPEMVRWELIAVDSDGPYRLTVHHAQGVIVEYFETSAAALMREQELEDLLIAARGAR
Ga0209901_103783813300026275Permafrost SoilVINFFMAGPEMVRWELIAVDSDGPYRLTVHHAQGVIVEYFETSAAALMREQELEDLLIAARGAR
Ga0209470_101470523300026324SoilMAGPELVRWDLIALETTGPYRLTVHHAQGVIVEYFTTPAAALRRQHELEDLLIAARGVVA
Ga0209515_10014218123300027835GroundwaterVLNFFMAGPEMVRWELTAVESNGPFRLAVHHAHGVIVEYFETSGAALMREQDLEDLLIAARGTSR
Ga0209590_1093638823300027882Vadose Zone SoilGTRLAISASVLSFFMAGPELVRWDLIALETTGPYRLTVHHAQGVIVEYFTTPAAALRRQHELEDLLIAARGVVAVR
Ga0268264_1131545113300028381Switchgrass RhizosphereVINFFMAGPEMVRWELTAVESNGPFRLIVHHAQGVIVEYFETSAAALMREQELEDLLVAARGNRR
Ga0268264_1182685513300028381Switchgrass RhizosphereGLAESSAMGNCFMAGAEMVRWELTAMAASGPYRLTVHHSQGTIVEYFEESAAALVREQELEGLLIAARGMGR
Ga0307284_1020763323300028799SoilMAGPEMVRWSLTAVDMHGPYRLTVHHCHGVIVEYFKTSSSALLRQHELEDLLIAARGSVSSADTR
Ga0307284_1033195923300028799SoilVLNFFMAGPEIVSWSLIAVEADGPYRLAVHHCHGVIVEYFKTSSSALLRQHELEDLLIAARGSVYSAGSR
Ga0307305_1015214423300028807SoilMAGPELVRWDLIALETTGPYRLTVHHAHGVIVEYFSSPAAALRRQHELEDLLIAARGVVAVR
Ga0307312_1007248743300028828SoilVLSFFMAGPDMVRWELIAETNGSFRLTVRHAQGVIIEYFQTSAAALLRQQELEDLLIAARGGDEDAHFSAVLAR
Ga0307312_1014333423300028828SoilMAGPELVRWDLIALETTGPYRLTVHHAQGVIVEYFSTPAAALRRQHELEDLLIAARGVVAVR
Ga0307511_1040163323300030521EctomycorrhizaVINFFMAGPEMVRWELTAVESNGPFRLIVHHAQGVIVEYFETSAAALMREQELEDLLVAARGSRR
Ga0308202_109213113300030902SoilMAGPEMVRWSLTAVDAHGPYRLSVHHCHGVIVEYFKTSSSALLRQHELEDLLIAARGSV
Ga0308178_110385113300030990SoilLSFFMAGPDMVRWELIAETNGSFRLTVRHAQGVIIEYFQTSAAALLRQQELEDLLIAARGGDEDAHFSAVLAR
Ga0308178_110590413300030990SoilAGPDMVRWELTIEPNGSYRLTVRHAQGVIIEYFQTSAGALLRQQELEDLLIAARGGDEDAHFATVLAR
Ga0308190_107921823300030993SoilMAGPEMVRWSLTAVDAHGPYRLSVHHCHGVIVEYFKTSSSALLRQHELEDLLIAARGSVSSADTR
Ga0308204_1019208113300031092SoilMAGPEMVRWSLTAVDMHGPYRLTVHHCHGVIVEYFKTSSSALLRQHELEDL
Ga0308197_1028625813300031093SoilMGIVLNFFMAGAEMVRWHLTAVQTDGPYRLTLHHGHGVIVEYFKTSDLALVRQHELERLLITARGAVSSAGIR
Ga0308181_111790713300031099SoilFVLSFFMAGPDMVRWELTIEPNGSYRLTVRHAQGVIIEYFQTSAGALLRQQELEDLLIAARGGDEDAHFATVLAR
Ga0170824_12481194323300031231Forest SoilVRWELTAVESNGPFRLIVHHAQGVIVEYFETSAAALMREQELEDLLMAARGSRR
Ga0307506_1049871323300031366SoilMAGPEVVRWELTAVESNGPYRLTVHHAHGVIVEYFDTSAAALMREQELEDLLTAARGTS
Ga0307469_1174852513300031720Hardwood Forest SoilMAGGEMVRWEILAVESQSVYKLSLHHADGVIVEYFKTSAAALVRQHELEDLLIAARGGVAVR
Ga0315290_1019290523300031834SedimentMAGPEMVRWELIAVDSNGPYRLTVFHAQGVIVEYFETSAAALMREHDLEELLIAARGTSR
Ga0315281_1018666533300032163SedimentVINFFMAGPEMVRWELTAVQSNGPFRLAVHHANGVIVEYFDTSAAAIMREQELEDLLIAARGTSR
Ga0315281_1034384523300032163SedimentVINFFMAGPEMVRWELTAVESNGPIRLTVHHALGVIVEYFDTSAAALMREQELEDLLLAARGTSR
Ga0315281_1079482723300032163SedimentMAGPEMVRWELTAVESNGPYRLTVHHAHGVIVEYFETSAAALMREHELEDLLIAARGTSQ
Ga0315281_1162004413300032163SedimentELTAVESNGPFRLAVYHALGVIVEYFETSAAALMREQELEALLIAARGTSR
Ga0315281_1198607913300032163SedimentRWELTAVESNGPYRLTVHHAHGVIVEYFETSAAALMREHELEDLLIAARGTSR

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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