Metagenome Family F061033

Basic Information
Family ID	F061033
Family Type	Metagenome
Number of Sequences	132
Average Sequence Length	107 residues
Representative Sequence	MSRLRVLRATVACLAIAAVTTGIHASGHGRTLVVTMTNDQNSNQIKVYDAESHALLQTLSTHGKGGVGGNARGIKQYDGRLVAVVNNGSGNVALF
Number of Associated Samples	101
Number of Associated Scaffolds	132

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	82.68 %
% of genes near scaffold ends (potentially truncated)	93.94 %
% of genes from short scaffolds (< 2000 bps)	87.88 %
Associated GOLD sequencing projects	92
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.50

Most Common Taxonomy
Group	Bacteria (52.273 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (9.848 % of family members)
Environment Ontology (ENVO)	Unclassified (31.818 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (60.606 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 13.82% β-sheet: 31.71% Coil/Unstructured: 54.47%
Feature Viewer

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Pfam ID	Name	% Frequency in 132 Family Scaffolds
PF03358	FMN_red	27.27
PF07681	DoxX	9.09
PF00903	Glyoxalase	6.82
PF12681	Glyoxalase_2	3.79
PF13419	HAD_2	3.03
PF10282	Lactonase	2.27
PF08281	Sigma70_r4_2	1.52
PF13490	zf-HC2	0.76
PF08494	DEAD_assoc	0.76
PF00578	AhpC-TSA	0.76

COG ID	Name	Functional Category	% Frequency in 132 Family Scaffolds
COG2259	Uncharacterized membrane protein YphA, DoxX/SURF4 family	Function unknown [S]	9.09
COG4270	Uncharacterized membrane protein	Function unknown [S]	9.09
COG1201	Lhr-like helicase	Replication, recombination and repair [L]	0.76

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	52.27 %
Unclassified	root	N/A	47.73 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	52.27 %
Unclassified	root	N/A	47.73 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	52.27 %
Unclassified	root	N/A	47.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.73 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	12.12 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	3.03 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2.27 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.76 %
Spirochaetes	phylum	All Organisms → cellular organisms → Bacteria → Spirochaetes	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.73 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2.27 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	2.27 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.76 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.76 %
Spirochaetia	class	All Organisms → cellular organisms → Bacteria → Spirochaetes → Spirochaetia	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.73 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.27 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2.27 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.76 %
Leptospirales	order	All Organisms → cellular organisms → Bacteria → Spirochaetes → Spirochaetia → Leptospirales	0.76 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.73 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	2.27 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.27 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.76 %
Cytophagia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia	0.76 %
Leptospiraceae	family	All Organisms → cellular organisms → Bacteria → Spirochaetes → Spirochaetia → Leptospirales → Leptospiraceae	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.73 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.27 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.27 %
Cytophagales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales	0.76 %
Sorangiineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae	0.76 %
Leptospira	genus	All Organisms → cellular organisms → Bacteria → Spirochaetes → Spirochaetia → Leptospirales → Leptospiraceae → Leptospira	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.73 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.27 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.27 %
Sandaracinaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Sandaracinaceae	0.76 %
Cytophagaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Cytophagaceae	0.76 %
Leptospira	genus	All Organisms → cellular organisms → Bacteria → Spirochaetes → Spirochaetia → Leptospirales → Leptospiraceae → Leptospira	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.73 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.27 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.27 %
Sandaracinus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Sandaracinaceae → Sandaracinus	0.76 %
Spirosoma	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Cytophagaceae → Spirosoma	0.76 %
Leptospira	genus	All Organisms → cellular organisms → Bacteria → Spirochaetes → Spirochaetia → Leptospirales → Leptospiraceae → Leptospira	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.73 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.27 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.27 %
Sandaracinus amylolyticus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Sandaracinaceae → Sandaracinus → Sandaracinus amylolyticus	0.76 %
Spirosoma terrae	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Cytophagaceae → Spirosoma → Spirosoma terrae	0.76 %
Leptospira	genus	All Organisms → cellular organisms → Bacteria → Spirochaetes → Spirochaetia → Leptospirales → Leptospiraceae → Leptospira	0.76 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000363\|ICChiseqgaiiFebDRAFT_14203308	Not Available	1107	Open in IMG/M
3300000363\|ICChiseqgaiiFebDRAFT_14204605	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	817	Open in IMG/M
3300000787\|JGI11643J11755_11702708	Not Available	536	Open in IMG/M
3300003321\|soilH1_10117566	All Organisms → cellular organisms → Bacteria	1574	Open in IMG/M
3300004081\|Ga0063454_100140867	All Organisms → cellular organisms → Bacteria → Proteobacteria	1254	Open in IMG/M
3300004463\|Ga0063356_104084764	Not Available	628	Open in IMG/M
3300004479\|Ga0062595_101405562	Not Available	636	Open in IMG/M
3300004480\|Ga0062592_100477261	All Organisms → cellular organisms → Bacteria → Proteobacteria	1022	Open in IMG/M
3300004480\|Ga0062592_101485313	Not Available	649	Open in IMG/M
3300004480\|Ga0062592_102417381	Not Available	527	Open in IMG/M
3300005293\|Ga0065715_10246073	Not Available	1183	Open in IMG/M
3300005294\|Ga0065705_10895985	Not Available	577	Open in IMG/M
3300005295\|Ga0065707_10949114	Not Available	553	Open in IMG/M
3300005332\|Ga0066388_104442362	All Organisms → cellular organisms → Bacteria	714	Open in IMG/M
3300005340\|Ga0070689_100514237	Not Available	1027	Open in IMG/M
3300005340\|Ga0070689_101362416	All Organisms → cellular organisms → Bacteria → Spirochaetes → Spirochaetia → Leptospirales → Leptospiraceae → Leptospira	640	Open in IMG/M
3300005340\|Ga0070689_101512618	Not Available	608	Open in IMG/M
3300005345\|Ga0070692_10330293	Not Available	941	Open in IMG/M
3300005347\|Ga0070668_100920754	All Organisms → cellular organisms → Bacteria	782	Open in IMG/M
3300005364\|Ga0070673_101682557	Not Available	600	Open in IMG/M
3300005366\|Ga0070659_101420555	All Organisms → cellular organisms → Bacteria	617	Open in IMG/M
3300005435\|Ga0070714_100065512	All Organisms → cellular organisms → Bacteria → Proteobacteria	3129	Open in IMG/M
3300005444\|Ga0070694_101305740	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	610	Open in IMG/M
3300005456\|Ga0070678_102130860	Not Available	531	Open in IMG/M
3300005526\|Ga0073909_10571265	Not Available	555	Open in IMG/M
3300005529\|Ga0070741_11576254	Not Available	539	Open in IMG/M
3300005544\|Ga0070686_100028762	All Organisms → cellular organisms → Bacteria	3373	Open in IMG/M
3300005548\|Ga0070665_100766016	Not Available	978	Open in IMG/M
3300005578\|Ga0068854_100983628	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	746	Open in IMG/M
3300005616\|Ga0068852_100387339	Not Available	1372	Open in IMG/M
3300005617\|Ga0068859_100056279	All Organisms → cellular organisms → Bacteria	3957	Open in IMG/M
3300005713\|Ga0066905_101905829	Not Available	550	Open in IMG/M
3300005719\|Ga0068861_100714933	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	932	Open in IMG/M
3300005764\|Ga0066903_105490847	All Organisms → cellular organisms → Bacteria	668	Open in IMG/M
3300005764\|Ga0066903_107655134	All Organisms → cellular organisms → Bacteria → Proteobacteria	556	Open in IMG/M
3300005842\|Ga0068858_100730350	Not Available	964	Open in IMG/M
3300005843\|Ga0068860_100205610	Not Available	1909	Open in IMG/M
3300005937\|Ga0081455_10313856	All Organisms → cellular organisms → Bacteria → Proteobacteria	1119	Open in IMG/M
3300006196\|Ga0075422_10011547	All Organisms → cellular organisms → Bacteria	2888	Open in IMG/M
3300006844\|Ga0075428_100188140	All Organisms → cellular organisms → Bacteria	2233	Open in IMG/M
3300006845\|Ga0075421_101880192	All Organisms → cellular organisms → Bacteria	641	Open in IMG/M
3300006846\|Ga0075430_100192115	All Organisms → cellular organisms → Bacteria → Proteobacteria	1697	Open in IMG/M
3300006880\|Ga0075429_100149057	All Organisms → cellular organisms → Bacteria → Proteobacteria	2048	Open in IMG/M
3300006904\|Ga0075424_101214747	All Organisms → cellular organisms → Bacteria	802	Open in IMG/M
3300006954\|Ga0079219_10668462	All Organisms → cellular organisms → Bacteria	780	Open in IMG/M
3300007076\|Ga0075435_100928899	All Organisms → cellular organisms → Bacteria → Proteobacteria	759	Open in IMG/M
3300009094\|Ga0111539_12268476	Not Available	630	Open in IMG/M
3300009098\|Ga0105245_12621933	Not Available	557	Open in IMG/M
3300009100\|Ga0075418_11171793	All Organisms → cellular organisms → Bacteria	832	Open in IMG/M
3300009156\|Ga0111538_10743748	All Organisms → cellular organisms → Bacteria → Proteobacteria	1242	Open in IMG/M
3300009156\|Ga0111538_11288456	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	923	Open in IMG/M
3300009156\|Ga0111538_13954529	Not Available	512	Open in IMG/M
3300009174\|Ga0105241_10116493	All Organisms → cellular organisms → Bacteria	2146	Open in IMG/M
3300009545\|Ga0105237_10981577	All Organisms → cellular organisms → Bacteria	851	Open in IMG/M
3300009553\|Ga0105249_10640993	All Organisms → cellular organisms → Bacteria → Proteobacteria	1120	Open in IMG/M
3300009553\|Ga0105249_11227652	Not Available	821	Open in IMG/M
3300010046\|Ga0126384_11478668	Not Available	636	Open in IMG/M
3300010047\|Ga0126382_10252134	All Organisms → cellular organisms → Bacteria → Proteobacteria	1294	Open in IMG/M
3300010047\|Ga0126382_10768057	All Organisms → cellular organisms → Bacteria	817	Open in IMG/M
3300010358\|Ga0126370_10487804	All Organisms → cellular organisms → Bacteria	1038	Open in IMG/M
3300010358\|Ga0126370_12445262	Not Available	519	Open in IMG/M
3300010362\|Ga0126377_10267966	All Organisms → cellular organisms → Bacteria	1670	Open in IMG/M
3300010396\|Ga0134126_13049349	Not Available	505	Open in IMG/M
3300010397\|Ga0134124_12550080	Not Available	554	Open in IMG/M
3300010399\|Ga0134127_10747996	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Cytophagaceae → Spirosoma → Spirosoma terrae	1022	Open in IMG/M
3300011119\|Ga0105246_10554335	Not Available	986	Open in IMG/M
3300011119\|Ga0105246_11933535	All Organisms → cellular organisms → Bacteria	567	Open in IMG/M
3300011119\|Ga0105246_12090644	Not Available	548	Open in IMG/M
3300012212\|Ga0150985_108900572	Not Available	674	Open in IMG/M
3300012212\|Ga0150985_111208285	All Organisms → cellular organisms → Bacteria	1316	Open in IMG/M
3300012931\|Ga0153915_12761728	Not Available	574	Open in IMG/M
3300012948\|Ga0126375_10654549	All Organisms → cellular organisms → Bacteria	811	Open in IMG/M
3300012955\|Ga0164298_10801072	All Organisms → cellular organisms → Bacteria	674	Open in IMG/M
3300012985\|Ga0164308_10933283	All Organisms → cellular organisms → Bacteria → Acidobacteria	767	Open in IMG/M
3300012986\|Ga0164304_10628291	Not Available	806	Open in IMG/M
3300013307\|Ga0157372_11251950	All Organisms → cellular organisms → Bacteria	857	Open in IMG/M
3300014745\|Ga0157377_10121196	Not Available	1585	Open in IMG/M
3300014969\|Ga0157376_10662979	Not Available	1045	Open in IMG/M
3300015371\|Ga0132258_10804804	All Organisms → cellular organisms → Bacteria	2370	Open in IMG/M
3300015371\|Ga0132258_11709628	All Organisms → cellular organisms → Bacteria	1587	Open in IMG/M
3300015371\|Ga0132258_13159170	All Organisms → cellular organisms → Bacteria → Proteobacteria	1137	Open in IMG/M
3300015372\|Ga0132256_100830405	All Organisms → cellular organisms → Bacteria → Proteobacteria	1040	Open in IMG/M
3300015372\|Ga0132256_101005472	All Organisms → cellular organisms → Bacteria	949	Open in IMG/M
3300015372\|Ga0132256_101891113	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Sandaracinaceae → Sandaracinus → Sandaracinus amylolyticus	704	Open in IMG/M
3300015372\|Ga0132256_102220334	All Organisms → cellular organisms → Bacteria	653	Open in IMG/M
3300015373\|Ga0132257_102688470	All Organisms → cellular organisms → Bacteria	648	Open in IMG/M
3300015373\|Ga0132257_104409358	Not Available	512	Open in IMG/M
3300015373\|Ga0132257_104604805	Not Available	502	Open in IMG/M
3300015374\|Ga0132255_100370449	All Organisms → cellular organisms → Bacteria	2078	Open in IMG/M
3300015374\|Ga0132255_103404103	All Organisms → cellular organisms → Bacteria	677	Open in IMG/M
3300015374\|Ga0132255_103483480	Not Available	670	Open in IMG/M
3300017792\|Ga0163161_10945822	Not Available	733	Open in IMG/M
3300017966\|Ga0187776_10140254	All Organisms → cellular organisms → Bacteria	1477	Open in IMG/M
3300018089\|Ga0187774_10101053	All Organisms → cellular organisms → Bacteria	1421	Open in IMG/M
3300024055\|Ga0247794_10018248	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1717	Open in IMG/M
3300025926\|Ga0207659_11608353	Not Available	555	Open in IMG/M
3300025928\|Ga0207700_10422962	All Organisms → cellular organisms → Bacteria	1171	Open in IMG/M
3300025938\|Ga0207704_10044370	All Organisms → cellular organisms → Bacteria	2633	Open in IMG/M
3300025940\|Ga0207691_10931866	All Organisms → cellular organisms → Bacteria	726	Open in IMG/M
3300025945\|Ga0207679_11836753	Not Available	553	Open in IMG/M
3300025960\|Ga0207651_11578778	Not Available	591	Open in IMG/M
3300025986\|Ga0207658_12050289	Not Available	520	Open in IMG/M
3300026121\|Ga0207683_10736508	Not Available	914	Open in IMG/M
3300026142\|Ga0207698_12443021	Not Available	533	Open in IMG/M
3300027617\|Ga0210002_1070752	Not Available	616	Open in IMG/M
3300027876\|Ga0209974_10461202	Not Available	505	Open in IMG/M
3300027907\|Ga0207428_10337474	All Organisms → cellular organisms → Bacteria	1110	Open in IMG/M
3300028381\|Ga0268264_10694787	Not Available	1010	Open in IMG/M
3300028597\|Ga0247820_11358619	Not Available	517	Open in IMG/M
3300028889\|Ga0247827_10197124	Not Available	1109	Open in IMG/M
3300031170\|Ga0307498_10272095	Not Available	623	Open in IMG/M
3300031547\|Ga0310887_10800232	All Organisms → cellular organisms → Bacteria	592	Open in IMG/M
3300031562\|Ga0310886_10113757	All Organisms → cellular organisms → Bacteria	1370	Open in IMG/M
3300031562\|Ga0310886_10577890	All Organisms → cellular organisms → Bacteria	687	Open in IMG/M
3300031716\|Ga0310813_10083412	All Organisms → cellular organisms → Bacteria	2445	Open in IMG/M
3300031716\|Ga0310813_11799835	Not Available	575	Open in IMG/M
3300031771\|Ga0318546_10790221	Not Available	668	Open in IMG/M
3300031854\|Ga0310904_10787815	Not Available	664	Open in IMG/M
3300031908\|Ga0310900_10097079	All Organisms → cellular organisms → Bacteria → Proteobacteria	1881	Open in IMG/M
3300031908\|Ga0310900_10771810	All Organisms → cellular organisms → Bacteria	775	Open in IMG/M
3300031939\|Ga0308174_11026917	Not Available	700	Open in IMG/M
3300031944\|Ga0310884_10080222	Not Available	1551	Open in IMG/M
3300032179\|Ga0310889_10055444	All Organisms → cellular organisms → Bacteria	1564	Open in IMG/M
3300032211\|Ga0310896_10104170	All Organisms → cellular organisms → Bacteria → Proteobacteria	1275	Open in IMG/M
3300032261\|Ga0306920_101387405	Not Available	1007	Open in IMG/M
3300033004\|Ga0335084_11105327	All Organisms → cellular organisms → Bacteria	795	Open in IMG/M
3300033004\|Ga0335084_11274971	All Organisms → cellular organisms → Bacteria	732	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	52.27%
Environmental	Environmental	47.73%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	52.27%
Terrestrial	Environmental → Terrestrial	46.97%
Aquatic	Environmental → Aquatic	0.76%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	46.97%
Rhizosphere	Host-Associated → Plants → Rhizosphere	29.55%
Rhizoplane	Host-Associated → Plants → Rhizoplane	22.73%
Freshwater	Environmental → Aquatic → Freshwater	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	33.33%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	18.18%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	11.36%
Soil	Host-Associated → Plants → Rhizosphere → Soil	11.36%
Loam	Environmental → Terrestrial → Soil → Loam	10.61%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	9.85%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.03%
Soil	Host-Associated → Plants → Rhizoplane → Soil	1.52%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	18.18%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	15.15%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	11.36%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	11.36%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	9.85%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	9.09%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.82%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	5.30%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.03%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.03%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.27%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.52%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	1.52%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.76%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.76%

Habitat	Taxonomy	Distribution
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	9.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	9.09%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	7.58%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	5.30%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.55%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	3.79%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	3.79%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	3.79%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	3.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	3.03%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.03%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	3.03%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	3.03%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.27%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.27%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.27%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.27%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.27%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.52%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	1.52%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.52%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.52%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	1.52%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	1.52%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.52%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.52%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.52%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.52%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.76%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.76%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	0.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.76%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.76%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.76%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.76%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.76%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.76%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.76%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.76%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000363	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000787	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300003321	Sugarcane bulk soil Sample H1	Environmental	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006196	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1	Host-Associated	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012931	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaG	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300018089	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_20_MG	Environmental	Open in IMG/M
3300024055	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S046-202B-6	Environmental	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027617	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 S AM (SPAdes)	Host-Associated	Open in IMG/M
3300027876	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes)	Host-Associated	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028597	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day14	Environmental	Open in IMG/M
3300028889	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day2	Environmental	Open in IMG/M
3300031170	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_S	Environmental	Open in IMG/M
3300031547	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4	Environmental	Open in IMG/M
3300031562	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031854	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1	Environmental	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300031939	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R2	Environmental	Open in IMG/M
3300031944	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D1	Environmental	Open in IMG/M
3300032179	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D2	Environmental	Open in IMG/M
3300032211	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D1	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033004	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ICChiseqgaiiFebDRAFT_142033082	3300000363	Soil	MPREYLSRARVSLTMRRNDMSRLKVLGAMVAGLALTAATTAIHASDHRHTLVVTMTNDAESNQIKVYDAESHVLLQTLSTHGKGGAGGNARGIKQYNGRLVAVVNN
ICChiseqgaiiFebDRAFT_142046053	3300000363	Soil	MSRLKVLGAMVAGLALTAATTAIHASDHRHTLVVTMTNDAESNQIKVYDAESHVLLQTLSTHGKGGAGGNARGIKQYNGRLVAVVNN
JGI11643J11755_117027082	3300000787	Soil	MFKRNALGVIVVVLAFAAGGAGIQASVGRGRTLVVTMTNDPNANQIRVYDAESHVLLQTLSTHGKGGVGGNARGVKQHDSRLVAVVNNGSNNVALFRRDGDALKFDRIVSTTS
soilH1_101175664	3300003321	Sugarcane Root And Bulk Soil	MFKLKVAGAAIVCFALAASAARIHADGRDATLVVTMTNDHEANQIKVYDANTRVLLQTLSTHGKGGAAGNARGIRQLDGTLIAVVNNGSNTVALFTRD
Ga0063454_1001408673	3300004081	Soil	MFKLKMVAAAAACFALAAGAARIHASGHDRTLVVTMTNDSDTNQIKVYDADTRVLLQTLSTHGKGGVGGNARGIKQLEGTLVAVVNNGSNTVALFRRDGDRLRFDKLVSTS
Ga0063356_1025553261	3300004463	Arabidopsis Thaliana Rhizosphere	MLRFRVLSATACVAIAVATTANVVATTGIHAAGHERTLVVTMTNDQDSNQLKVYDAESHVLLQTLSTHGKGGAGGNARGVGQYNGRL
Ga0063356_1040847642	3300004463	Arabidopsis Thaliana Rhizosphere	MLRFKVLSAALAFVGIAAATSGVHASDHRRTLVVTMTNDQDSNEIKVYDADSHALLQTLSTHGKGGVGGNARGIKQYNGGLVAVVNNGSGSVAVFRRDGDALKFD
Ga0062595_1014055622	3300004479	Soil	MFRRNVLAMVVTGIAVAAGAASIDASGGQGRTLVVTMTNDPNENQIKVYDAQSHALLQTLSTHGKGGAAGNARGIKPNDGRLVAVVNNGSNSVALFSR
Ga0062592_1004772611	3300004480	Soil	MLKLKVVSAALAFLAIAAATAGVHASDHRRTLVVTMTNDQDSNEIKVYDAESHALLQTLSTRGKGGVGGNARGIKQYNGGLVAAVNNGSGSVAVFRRDGDALKFEKVIQTTSAPVSVDFGSDHLYVAG
Ga0062592_1014853132	3300004480	Soil	MSRLKVLGAMVAGLALTAATTAIHASDHRHTLVVTMTNDAESNQIKVYDAESHVLLQTLSTHGKGGAGGNARGIKQYNGRLVAVVNNGSGNVALFRRDGDALRFDKVVAT
Ga0062592_1024173811	3300004480	Soil	MLKRNVLGVIVAGVAFAAGGTGILATASLERTLVVTMTNDPDANQIKAYDAESHALLQTLSTQGKGGVGGNARGIKQHDSRLVAVVNNGSNSVALFRRDGDLLR
Ga0065715_102460731	3300005293	Miscanthus Rhizosphere	MSRLKVLGAMVAGLALTAATTAIHASDHRHTLVVTMTNDAESNQIKVYDAESHVLLQTLSTHGKGGAGGNARGIKRYNGRLVAVVNNGSGNVALFR
Ga0065705_108959851	3300005294	Switchgrass Rhizosphere	MLKRNVLGVIVAGVAFAAGGTGILATASLERTLVVTMTNDPDANQIKVYDAESHALLQTLSTQGKGGVGGNARGIKQHDSRLVAVVNNGSNSVALFRRDGDLLRFDKVVSTTSAPVSVD
Ga0065707_109491142	3300005295	Switchgrass Rhizosphere	MFKRNALGVIVAFLALAAGGAGIQASGGHGRTLVVTMTNDPNINQIQVYDAESHVLLQTLSTHGQGGVGGNARGVKQHDGTLVAVVNNGSNNVALFRR
Ga0066388_1044423621	3300005332	Tropical Forest Soil	MIRMKVFAAVACLALAAGATHIHASAHDRTLVVTMTNDPNTNEIKVYDADSHALLQTLSTHGKGGVGGNARGVKQFDRTLVAVVNNGS
Ga0070689_1005142371	3300005340	Switchgrass Rhizosphere	MPRLKVLYATVAVLALAAGGAGIHASDRHGRTLVITMTNDPNANQLRVYDAQSHVLLQTLSTHGKGGVGGNARGVKQHDGTLVAAVNNGSNSVALFRRDGDRLTFDRVVLTTSAPVSVDFGNDH
Ga0070689_1013624161	3300005340	Switchgrass Rhizosphere	MFRRNVLGVIVAVLALAAGSGGIYANGTHGRTLVVTMTNDPDANQVKVYDAQSHVLLQTLSAHGRGGVGGNARGIKQNDGILVAVVNNGSNSVALF
Ga0070689_1015126181	3300005340	Switchgrass Rhizosphere	MFRRNVLAMVVTGIAVAAGAASIHASGGQRRTLVVTMTNDPNENQIKVYDAQSHALLQTLSTHGKGGAAGNARGIKPNDGRLVAVVNNGSNSVALFSRDGDALRFDKVVSTTSAPVSV
Ga0070692_103302931	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	MSRLKVLGAMVAGLALTAATTAIHASDHRHTLVVTMTNDAESNQIKVYDAESHVLLQTLSTHGKGGAGGNARGIKQYNGRLVAVVNNGSGNVA
Ga0070668_1009207542	3300005347	Switchgrass Rhizosphere	MFRRNVLAMVVTGIAVAAGAASIHASGGQGRTLVVTMTNDPNENQIKVYDAQSHALLQTLSTHGKGGAAGNARGIKPNDGRLVAVVNNGSNSVALFSRDGDALR
Ga0070673_1016825572	3300005364	Switchgrass Rhizosphere	MPRLKVLYATVAFLAFAAGGAGIHASDRHGRTLVITMTNDPNANQLRVYDAQSHVLLQTLSTHGKGGVGGNARGVKQHDGTLVAAVNNGSNS
Ga0070659_1014205551	3300005366	Corn Rhizosphere	MSRLKVLSVAVACLTIAAATAGIQASGHQRTLVVTMTNDQNSNQISVYDAESHALLQTLSTRGKGGAGGNARGIKQYDRRLVAVVNNGS
Ga0070714_1000655126	3300005435	Agricultural Soil	MSRRNVLSVFVAFLAIAGSGAGIYASGGHGRALVVTMTNDPDANQIRVYDSESHALLQTLSTHGKGGAAGNARGIRQHDGRLVAVVNNGSNDVALFRRDGDVLKFDKVVSTTSAPVS
Ga0070694_1013057402	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MCRRNVLGVIVACVAFSAGGAGIRASGDEGRALVVTMTNDPNANQLRVYDARSHALLQTLSTHGKGGVGGNAHGIKQHDGRLVAVVNNGSNSVALFRRDGDVL
Ga0070678_1021308601	3300005456	Miscanthus Rhizosphere	MTFKESVMFKLRMLCAVTSTLLAIGAGTIHASGHARTLVLTMTNDPQGNQLKVYDADSRALLQTLSTHGKGGAGGNARGITRDDGRLVAVVNNGSNTVAIFRRDGDALTFDQLVWTTS
Ga0073909_105712651	3300005526	Surface Soil	MSRLRVLRATVACLAIAAVTTGIHASGHGRTLVVTMTNDQNSNQIKVYDAESHALLQTLSTHGKGGVGGNARGIKQYDGRLVAVVNNGSGNVALF
Ga0070741_115762541	3300005529	Surface Soil	MFRLRVLCATVACLAMAAATPAIHASGDHRALIVTMTNDPDANQIKVYDAESHALLQTLSTHGKGGVAGNARGIKQYGGRLVAVVNNGSGSVALFRRDGDVLKFEKTIQTSSAPVSVDFG
Ga0070686_1000287621	3300005544	Switchgrass Rhizosphere	MSRLKVLGAMVAGLALTAATTAIHASDHRHTLVVTMTNDAESNQIKVYDAESQALLQTLSTHGKGGVGGNARGVKQYDGRLVAVVNNGSGN
Ga0070665_1007660162	3300005548	Switchgrass Rhizosphere	MPRLKVLYATVAVLALAAGGAGIHASDRHGRTLVITMTNDPNANQLRVYDAQSHVLLQTLSTHGKGGVGGNARGVKQHDGKLVAAVNNGSNSVAVFRRDGDLLKFDRVVSTTSAPVSVD
Ga0068854_1009836281	3300005578	Corn Rhizosphere	MLKVRVLSAALAGLAIAAVTAGVHASGHGRTLVVTMTNDQNANEIKVYDAESQALLQTLSTRGKGGAGGNARGIKQYGGRLVAAVNNGSGNVALFRRDG
Ga0068852_1003873391	3300005616	Corn Rhizosphere	MSRLKVLGAMVAGLALTAATTAIHASDHRHTLVVTMTNDAESNQIKVYDAESHVLLQTLSTHGKGGAGGNARGIKQYNGRLVAVVNNGSGNVALFRRDGDALRFDKVVATS
Ga0068859_1000562795	3300005617	Switchgrass Rhizosphere	MSRLKVLGAMVAGLALTAATTAIHASDHRHTLVVTMTNDAESNQIKVYDAESHVLLQTLSTHGKGGAGGNARGIKQYNGRLVAVVNNGSGNVALFRRDGDALRFDKVVATTSAP*
Ga0066905_1019058291	3300005713	Tropical Forest Soil	MFRTNILCATVACLAFAAGGAGVHASAHERRLVVTMTNDPNVNQIKVYDADSHALLQTLSTHGKGGAGGNARGIRQLDGRLVAVVNNGSNSVALFRRDGDVLKFDKVVSTSSAPVSVDFGNDH
Ga0068861_1007149331	3300005719	Switchgrass Rhizosphere	MPRSKVLYATVAFLAFAAGGAGIHASDRHGRTLVITMTNDPNANQLRVYDAQSHVLLQTLSTHGKGGVGGNARGVKQHDGKLVAAVNNGSNSVAVFRRDGDLLKFDRVVSTTSAPVSVDFGNDH
Ga0066903_1054908472	3300005764	Tropical Forest Soil	MFKLKVAGLAVVCFALVAGFARIHADGHDVTLVVTMTNDPETNQIKVYDANTRVLLQTLSTHGKGGVGGNARGIRQLDGTLIAVVNNGSNTVALFTRA
Ga0066903_1076551342	3300005764	Tropical Forest Soil	MIRMKVFAAVACLALAAGATHIHASVHDRTLVVTMTNDPNTNEIKVYDADSHTLLQTLSTHGKGGVGGNARGIKQFDRSLVAVVNNGSNSVALFKRSGDSLRFDRLVTTTSAPVSVDFGN
Ga0068858_1007303502	3300005842	Switchgrass Rhizosphere	MSRLKVLGAMVAGLALTAATTAIHASDHRHTLVVTMTNDAESNQIKVYDAESHVLLQTLSTHGKGGAGGNARGIKRYNGRLVAVVNNGSGNVALFRRDGDALRFDKVVATTSAP*
Ga0068860_1002056101	3300005843	Switchgrass Rhizosphere	MSRLKVLGAMVAGLALTAATTAIHASDHRHTLVVTMTNDAESNQIKVYDAESHVLLQTLSTHGKGGAGGNARGIKQYNGRLVAVVNNGSGNVALFRRDGDALRFDKVVA
Ga0081455_103138563	3300005937	Tabebuia Heterophylla Rhizosphere	MLRLKVLSAALASLAIAAATAGVHASGHRRTLVVTMTNDQDANEIKVYDAESHALLQTLSTHGKGGVGGNARGIKQYNGGLVAAVNNGSGSVA
Ga0075422_100115471	3300006196	Populus Rhizosphere	MSRLKVLGAMVAGLALTAATTAIHASDHRHTLVVTMTNDAESNQIKVYDAESHVLLQTLSTHGKGGAGGNARGIKQYNGRLVAVVNNGSGNVALFRRDGDALRFDKVVATTSAPVS
Ga0075428_1001881404	3300006844	Populus Rhizosphere	MFRRNVLGVTVAFLAFAAGSGGIFASGAHGRTLVVTMTNDPDANQIKVYDAQSRVLLQTLSTHGTGGVGGNARGIKQNDGRLVAVVNNGSNSVA
Ga0075421_1018801921	3300006845	Populus Rhizosphere	MSRLKVWCAAACLAFAAGSSGIHASGGNQRTLVVTMTNDPTANEIRVYDADSHVLVQTLSTHGQGGVGGNARGIKQHEGRLIAVVNN
Ga0075430_1001921151	3300006846	Populus Rhizosphere	MFKRNALGVIVVVLAFAAGGAGIQASVGRGRTLVVTMTNDPNANQIRVYDAESHVLLQTLSTHGKGGVGGNARGVKQHDSRLVAVVNNGSNNVALFRRDGD
Ga0075429_1001490572	3300006880	Populus Rhizosphere	MFRRNVLGVTVAFLAFAAGSGGIFASGAHGRTLVVTMTNDPDANQIKVYDAQSRVLLQTLSTHGTGGVGGNARGIKQNDGRLVAVVNNGSNSVALFRRDGAC*
Ga0075424_1012147471	3300006904	Populus Rhizosphere	MMKFKVLSAVLASLAIGAVTAGVHASGHRRTLVVTMTNDENSNQIKVYDAESHALTLSTHGKGGVGGNARGIKQYDGGLVAAVNNGSGSVAVFRRDGDGLKFEKVIPTTSAPV
Ga0079219_106684621	3300006954	Agricultural Soil	MSWLDSRGRAGDRDARGRSRAAEYFCRVRVFLTFEENVMSRRTVLGVIVACVTLAAGGAEILANDGQGRTLVVTMTNDPDANQIKVYDAQSHVLVQTLSTRGKGGAAGNARGIRQHDRRLVAVVNNGSNSVALFRRD
Ga0075435_1009288992	3300007076	Populus Rhizosphere	MFRLKVVRAAIVCVAVVAGAARIHASGHDRALVVTMTNDPETNHIKVYDADSGALVQTLSTHGRGGVGGNARGIRQLDGTLVAVVNNGSNTVALFRRD
Ga0111539_122684762	3300009094	Populus Rhizosphere	LKENVMFRVQVLCVTVACLAFAAGATGIHASGDARTLVVTMTNDPNSNEIKVYDAESQVLLQTLSTHGKGGAGGNARGIKQYDRSLVAVVNNGSNDVALFRRSGNTLRFDRTVST
Ga0105245_126219331	3300009098	Miscanthus Rhizosphere	MSGHSVEAGPEYFARARVFLTVKENVMLKVRVLSAALAGLAIAAVTAGVHASGHGRTLVVTMTNDQNANEIKVYDAESQALLQTLSTHGKGGVGGNARGIKQYNGGLVAAVNNGSGSVAVFRRDGDALKFEKVIQTTSAPVSVDFGN
Ga0075418_111717932	3300009100	Populus Rhizosphere	MRRNDMSRLKVLGAMVAGLALTAATTAIHASDHRHTLVVTMTNDAESNQIKVYDAESHVLLQTLSTHGKGGAGGNARGIKQYNGRLVAVVNNGSGNVALFRRDGDALRFD
Ga0111538_107437483	3300009156	Populus Rhizosphere	MMFEENVMLKLKVVSAALAFLAIAAATAGVHASDHRRTLVVTMTNDQDSNEIKVYDAESHALLQTLSTHGKGGAGGNARGIKQYGGRLVAAVNNGSGSVALFRRDGDALRFDRVIQTTSAPL
Ga0111538_112884561	3300009156	Populus Rhizosphere	LARRDSDIPPVASEYFYRAGVFLTFEENVMFKRNAIDVIVVVLALAAGGAGMHASGGHGRTLVVTMTNDPNANQIRVYDAESNALLQTLSTHGTGGVGGNARGVKQHDGRLVAVVNYGSNSVALFRRDGDVLKFDKVVPTTSAPVS
Ga0111538_139545292	3300009156	Populus Rhizosphere	MLRFRVLSAAVACLTMAAATTGIQARGHERTLVVTMTNDQNSNQIKVYDADSHALLQTLSTHGQGGAGGNARGVKQYGGRLVAAVNNGSGNVALFRRDGDTLKFDRLIQTTSAPVSVD
Ga0105241_101164931	3300009174	Corn Rhizosphere	VTFEENVMCRRNVLGVIVACVAFTAGGTGIRASGGQGRTLVVTMTNDQNANQLRVYDAQSHALLQTLSTHGKGGVGGNAHGIKQHDGRLVAVVNNGSNSVALFRRDGD
Ga0105237_109815771	3300009545	Corn Rhizosphere	MVVTGIAVAAGAASIHASGGQRRTLVVTMTNDPNENQIKVYDAQSHALLQTLSTHGKGGAAGNARGIKPNDGRLVAVVNNGSNSVALFSRDGDALRFDKVV
Ga0105249_106409933	3300009553	Switchgrass Rhizosphere	MSRLRVLSAAVASFAIAAATAGIHASDHRRTLVVTMTNDANSNQINVYDAESHALLQTLSTQGRGGASGNARGVKQYEGRLVAVVNNGSNNVALFRRDGDVLRFDK
Ga0105249_112276522	3300009553	Switchgrass Rhizosphere	MVVTGIAVAAGAASIHASGGQGRTLVVTMTNDPNENQIKVYDAQSHALLQTLSTHGKGGAAGNARGIKPNDGRLVAVVNNGSNSVALFSRDGDALRFDKVVSTTSAPVSVDFGN
Ga0126384_114786682	3300010046	Tropical Forest Soil	MIRMKVFAAVACLALAAGATHIHASAHDRTLVVTMTNDPNTNEIKVYDADSHALLQTLSTHGKGGVGGNARGIKQFDRTLVAVVNNGSNSVALFRRSGDSLRFDGLVTTT
Ga0126382_102521341	3300010047	Tropical Forest Soil	MDAFRSYSADCIASGGTQEYFSHPRVFVTFEENVMSRFRVFGAAVACVAIAAAATGIHASGHARTLVVTMTNDQTTNQIRVYDAESHALLQTLSTHGKGGVAGNARGIKQHEGRLVAAVNNGSGNVALFRRDGDVLKFDKVIQTTSAP
Ga0126382_107680571	3300010047	Tropical Forest Soil	MIRMKVFAAVACLALAAGATHTHASAHDRTLVVTMTNDPNTNEIKVYDADSHALVQTLSTHGKGGVGGNARGIKQFDRTLVAVVNNGSNSVALFKRS
Ga0126370_104878041	3300010358	Tropical Forest Soil	MIRMNVFAAVACLAVAAGATHIHASAHDRTLVVTMTNDPNTNEIKVYDADSHTLLQTLSTHGKGGVGGNARGIKQFDRSLVAVVNNGSNSVALFKRS
Ga0126370_124452621	3300010358	Tropical Forest Soil	MFRLKVVGAAVVCFALAAGAARIHASGIERTLVVTMTNDPEANQVKVYDANSRVLLQTLSTHGKGGVGGNARGIKQLDGTLIAVVNNGSNTVA
Ga0126377_102679661	3300010362	Tropical Forest Soil	MDAFRSSSADCIVSGGTQEYFSRARVFLTFEENVMSRFKVFGATVACVAIAAAATGIHASGHARTLVVTMTNDQNANQIRVYDAESHALLQTLSTHGKGGVAGNARGIKQHEGRLVAAVNNGS
Ga0134126_130493491	3300010396	Terrestrial Soil	VTFEENVMVRRNVLGVIVAFLAFAAGSGGIYASGTHRRTLVVTMSNDSNANELRVYDAESHVLLQTLSTHGKGGVGNNARGIKQNDGRLVAVVNNGSNSVALFR
Ga0134124_125500802	3300010397	Terrestrial Soil	MFKENVMLKFKVLSAALAFLAIAAATAGIHASGHRRTLVITMTNDQNANEIKVYDADSHVLLQTLSTHGKGGVGGNARGIKQYNGGLVAVVNNGSGSVAVFRR
Ga0134127_107479961	3300010399	Terrestrial Soil	VRVFLTFEENVMSRRNVLGVIVAILTFAAGGAGIDAGGGHGRTLVVTMTNDPNQNQLRVYDAQSHVLLQTLSTHGKGGVGGNARGIKQDDGRLVAVVNNGSNSV
Ga0105246_105543351	3300011119	Miscanthus Rhizosphere	MRRNDMSRLKVLGAMVAGLALTAATTAIHASDHRHTLVVTMTNDAESNQIKVYDAESHVLLQTLSTHGKGGAGGNARGIKQYNGRLVAVVNNGSGNVALFRRDGDALRF
Ga0105246_119335352	3300011119	Miscanthus Rhizosphere	MLRFKVLSVALAFLAIAAATAGVQASGHRRTLVVTMTNDQDSNEIKVYDGESHALLQTLSTHGKGGVAGNARGIKQYNGGLVAAINNGSGSVAVFRRDGDALKFDKVIQT
Ga0105246_120906442	3300011119	Miscanthus Rhizosphere	VRVFLTFEENVMFRRNVLGVIVAVLALAAGSGGIYANGTHGRTLVVTMTNDPDANQVKVYDAQSHVLLQTLSAHGRGGVGGNARGIKQNDGVLVAVVNNGSNSVALFRRDGDVLKFDRTVSTTSAPVSVDFGNEHLYV
Ga0150985_1089005722	3300012212	Avena Fatua Rhizosphere	MFKRNVLVVIVACVAFAAGGTGIRAAGRHERTLVVTMTNDPTANQIKVYDAESHVLLQTLSTHGAGGVGGNARGIKQYDSRLVAVVNNGSDSVALFRRDGDVLTFDKVVSTTSAPVSVDF
Ga0150985_1112082853	3300012212	Avena Fatua Rhizosphere	VEYFRSVRVLVTVKETLMFKRNVLGVIVASVAFAAGGTGIRAASGHERTLVVTMTNDRTANQIKVYDAQSHVLLQTLSTHGQGGVGGNARGIKQYDRRLVAVVNNGSNSVALFRRDGDVLNIDEVVSTTSA
Ga0153915_127617281	3300012931	Freshwater Wetlands	MFRPNVLGVIVACAALAAGTAGIHANSGHGRTLVVTMTNDPNANQLKVYDAQSHVLLQTLSTHGKGGVGGNARGIKQHDDQLIAVVNNGSNSVALFRRDGDALTFDKVVSTTSAPVS
Ga0126375_106545491	3300012948	Tropical Forest Soil	MFRLGIATTVTAGLVFAGAAAIHAGGHGRTLVVTMTNDAAHNQIKVYDADSRQLLQTLPTFGKGGAGGNARGIKQIDGGLVAVVNNGSNSV
Ga0164298_108010722	3300012955	Soil	MFEVNVMLKFRVLSAALAGLAIAAVTAGVHASGHGRTLVVTMTNDQNANEIKVYDAESQALLQTLSTHGKGGACGNARGIKQFGGGLVAAVNNGSGNVALCRRDGDALK
Ga0164308_109332833	3300012985	Soil	MSKRKVLGAIVGVLAFAAGSSGIHASENDEHTLIVTMTNDPDANQIRVYDAASHVLLQSLSTHGQGGAGGNARGIKQHDGRLVAVVNNGSNTVAIFRRVGDALKFDKVVTTTS
Ga0164304_106282912	3300012986	Soil	VRVFLTFEENVMFRRNVLGVIVAVLALAAGSGGIYANGTHGRTLVVTMTNDPDANQVKVYDAQSHVLLQTLSAHGRGGVGGNARGIKQNDGILVAVVNNGSNSVALFRRDGD
Ga0157372_112519501	3300013307	Corn Rhizosphere	MFKLKVAGAAIVCFALAASAARIHADGRDATLVVTMTNDHEANQIKVYDANTRVLLQTLSTHGKGGAAGNARGIRQLDGTLIAAVNNGSNTV
Ga0157377_101211962	3300014745	Miscanthus Rhizosphere	MRRNDMSRLKVLGAMVAGLALTAATTAIHASDHRHTLVVTMTNDAESNQIKVYDAESHVLLQTLSTHGKGGAGGNARGIKRYNGRLVAVVNNGSGNVALFRRDGDALRF
Ga0157376_106629791	3300014969	Miscanthus Rhizosphere	VRVFLTFEENVMFRRNVLGVIVAVLALAAGSGGIYANGTHGRTLVVTMTNDPDANQVKVYDAQSHVLLQTLSAHGRGGVGGNARGIKQNDGILVAVVNNGSNSVALFRRDGDVLKFDRTVSTTSAPVSVDFGN
Ga0132258_108048044	3300015371	Arabidopsis Rhizosphere	MKKLTVLAAATVCLIFAARTGTYASGHARTLVVTMTNDVNANQIQVYDAESHALVQTLSTRGKGGAGGNARGIRQLDGRLIAVVNNGS
Ga0132258_117096284	3300015371	Arabidopsis Rhizosphere	VFEENVMLKFKVLSAVLASLAIAAATAGVHASGHRRTLVITMTNDQNSNEIKVYDADSHALLQTLSTHGKGGVGGNARGIKQYNGGLVAVVN
Ga0132258_121459573	3300015371	Arabidopsis Rhizosphere	MLKSRFRVLSAALALLAIAVATAGIHADGHRRTLVVTMTNDQNSNEIKVYDAESHALLQTLSTHGKGGVGGNARGIKQYNGGLVAV
Ga0132258_131591703	3300015371	Arabidopsis Rhizosphere	MFEVNVMLKFRVLSAALAFLAIAAATAEVQASGHRRTLVVTMTNDQDSNEIKVYDAESHALLQTLSTHGKGGVGGNARGIKQYNGGLVAAV
Ga0132256_1008304051	3300015372	Arabidopsis Rhizosphere	MFEVNVMLKFRVLSAALAFLAIAAATAGVQASGHRRTLVVTMTNDQDSNEIKVYDAESHALLQTLSTHGKGGVGGNARGIKQYNGGLVAAVNNGSGSVAVF
Ga0132256_1010054722	3300015372	Arabidopsis Rhizosphere	VERDRDTPHVVSEYFSTLRVFVTFEENVMFKRNALRVIVVVLAFAASGTGTHASGSDRRTLIVTMTNDPNANQINVYDAKSHVLLQTLSTHGRGGVGGNARGVKQHDGRLVAVVNNGSSSVALFRRDGDVLKFEEVVSTT
Ga0132256_1018911132	3300015372	Arabidopsis Rhizosphere	MKKLTVLAAATVCLIFAARTGTYASGHARTLVVTMTNDVNANQIQVYDAESHALVQTLSTRGKGGAGGNARGIRQLDGRLIAV
Ga0132256_1022203341	3300015372	Arabidopsis Rhizosphere	MFKENVMLKFKVLSAALAFLAIAAATAGVHASGHRRTLVVTMTNDQDSNEIKVYDAESHALLQTLSTQGKGGVGGNARGIKQYNGGLVAAVNNGSGSVAVFRRDGDALKFD
Ga0132256_1026978381	3300015372	Arabidopsis Rhizosphere	MFKFRVLSATVACFVIAAAAGRIHASGHERTLVVTMTNDQDSNQIKIYDAESHALLQTLSTHGRGGVGGNARGIKQYNGRLVA
Ga0132257_1026884701	3300015373	Arabidopsis Rhizosphere	MFKENVMLKFKVLSAALAFLAIAAATAGVHASGHRRTLVVTMTNDQDSNEIKVYDAESHALLQTLSTQGKGGVGGNARGIKQYNGGLVAAVNNG
Ga0132257_1044093581	3300015373	Arabidopsis Rhizosphere	MFRLGVLSATVAGLAITAATAGVYANGHQRTLVVTMNNDADSNEIKVYDAASRALLQTLSTHGKGGVAGNARGVKQFDGTLVAVVNN
Ga0132257_1046048051	3300015373	Arabidopsis Rhizosphere	VTFEENVMMKFTVLSAVLASLAIGAATAGVHASGHRRTLVVTMTNDENSNQIKVYDAESHALLQTLSTHGKGGVGGNARGIKQYDGGLVA
Ga0132255_1003704491	3300015374	Arabidopsis Rhizosphere	MTFKESVMFKLRMLCAVTSTLLAIGAGTIHASGHARTLVLTMTNDPQGNQLKVYDADSRALLQTLSTHGKGGAGRNARGITRDDGRLVAV
Ga0132255_1034041032	3300015374	Arabidopsis Rhizosphere	VTLKENVMSRLRVLRAMVAGLALTAATTGIQASSHRRTLVVTMTNDADANQIKVYDAESQALLQTLSTHGKGGVGGNARGVKQYDGRLVAVVNNGSGNVALFRRDGDELKFDEVVTTTSAPVS
Ga0132255_1034834802	3300015374	Arabidopsis Rhizosphere	MAAATTGIHASDQGRTLVVTMTNDADSNQIQVYDAATRVLLQTLPTHGKGGAGGNARGIKQYDGRLVAAVNNGSGSVAIFRRDGDTLKFDKVIPTTSARQRGLRQRSFVRR
Ga0163161_109458222	3300017792	Switchgrass Rhizosphere	MFRRNVLGVIVAVLALAAGSGGIYANGTHGRTLVVTMTNDPDANQVKVYDAQSHVLLQTLSAHGRGGVGGNARGIKQNDGILVAVVNNGSNSVALFRRDGDVLKFDRTVSTTSAPVSVDFGNEHL
Ga0187776_101402543	3300017966	Tropical Peatland	MSRLKMLCTATACLAFAAGAAGIHASGHDRTLVVTMTNDPDSNQIKVYDADSRVLLQTLSTHGKGGASGNARGIRQHDGALVAVVNNGSNSVALFRRNGDALTFDKVV
Ga0187774_101010533	3300018089	Tropical Peatland	MRVFLTFKENVMSRLKMLCTATACLAFAAGAAGIHASGHDRTLVVTMTNDPDSNQIKVYDADSRVLLQTLSTHGKGGASGNARGIRQHDGALVAVVNNGSNSVALF
Ga0247794_100182483	3300024055	Soil	MSRRKVFSLIVGVLAFAAGGSGIHASENGERTLIVTMTNDPDANQIRVYDAASRVLLQTLSTYGQGGAGGNARGIKQHDGRLVAVVNNGSNNVAIFR
Ga0207659_116083531	3300025926	Miscanthus Rhizosphere	MFRRNVLGVIVAVLALAAGSGGIYANGTHGRTLVVTMTNDPDANQVKVYDAQSHVLLQTLSAHGRGGVGGNARGIKQNDGILVAVVNNGSNSVALFRRDGDV
Ga0207700_104229622	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MSRRNVLSVFVAFLAIAGSSAGIHASGGHARALVVTMTNDPDANQIRVYDSESHALLQTLSTHGKGGAAGNARGIRQHDGRLVAVVNNGSNDVALFRRDGDVLKFDKVVSTTSAPVSVDFGNDHMYVAGATT
Ga0207670_117074261	3300025936	Switchgrass Rhizosphere	MFRRNVLGVIVAVLALAAGSGGIYANGTHGRTLVVTMTNDPDANQVKVYDAQSHVLLQTLSAHGRGGVGGNARGIKQNDGILVAVAQHLLKWVRNP
Ga0207704_100443705	3300025938	Miscanthus Rhizosphere	MFRRNVLAMVVTGIAVAAGAASIHASGGQRRTLVVTMTNDPNENQIKVYDAQSHALLQTLSTHGKGGAAGNARGIKPNDGRLVAVVNNGSNSVALFS
Ga0207691_109318662	3300025940	Miscanthus Rhizosphere	MFEVNVMLKFKVLSVALAFLAIAAATAGVQASGHRRTLVVTMTNDPNANQLRVYDARSHALLQTLSTHGKGGVGGNAHGIKQHDGRLVAVVNN
Ga0207679_114969772	3300025945	Corn Rhizosphere	MLRFRVLSATACVAIAVATTANVVATTGIHAAGHERTLVVTMTNDQDSNQLKVYDAESHVLLQTLSTHGKGGAGGNARGVGQYNG
Ga0207679_118367531	3300025945	Corn Rhizosphere	MSRLKVCSAIACAAIATGASQIHARGVDATLVVTMTNDDNANELRVYDAASRALVQTLSTHGKGGVGGNARGIKQYGDTLVAVVNNGSNSVAL
Ga0207651_115787781	3300025960	Switchgrass Rhizosphere	MCRRNVLGVIVACVAFSAGGAGIRASGDEGRALVVTMTNDPNANQLRVYDARSHALLQTLSTHGKGGVGGNAHGIKQHDGRLVAVVNNGSNSVALFRRDGDVLKFDNV
Ga0207658_120502892	3300025986	Switchgrass Rhizosphere	MFRRNVLAMVVTGIAVAAGAASIHASGGQGRTLVVTMTNDPNENQIKVYDAQSHALLQTLSTHGKGGAAGNARGIKPNDGRLVAVVNNGSNSVALFSRDGDALRFDKVVSTTSAPVSVDFGNDNLYVAGATTVD
Ga0207683_107365083	3300026121	Miscanthus Rhizosphere	MFRRNVLGVIVAVLALAAGSGGIYANGTHGRTLVVTMTNDPDANQVKVYDAQSHVLLQTLSAHGRGGVGGNARGIKQNDGILVAVVNNGSNSVALFRRDGDVLKFDR
Ga0207698_124430211	3300026142	Corn Rhizosphere	MLKIRVLSAALACLAIAAVTAGVHASGHGRTLVVTMTNDQNANEIKVYDAESQALLQTLSTRGKGGAGGNARGIKQYGGGLVAAVNTGSGTVALFRRDGDALKFEKIVQTTSAPLSV
Ga0210002_10707521	3300027617	Arabidopsis Thaliana Rhizosphere	MSRLKVLGAMVAGLALTAATTAIHASDHRHTLVVTMTNDAESNQIKVYDAESHVLLQTLSTHGKGGAGGNARGIKQYNGRLVAVVNNGSGNV
Ga0209974_104612021	3300027876	Arabidopsis Thaliana Rhizosphere	MFTPKIVGAAVACVALTAGAAARIHASSNDRALVVTMTNDPETNQIKVYDANNGDLLQTLPTHGKGGVGGNARGIKQLDGTLVAVVNNGSNTVALFKRDGDRLRFEK
Ga0207428_103374743	3300027907	Populus Rhizosphere	MFKRNVLGVFVACVGFAAGGAGIYASGGHERTLVVTMTNGPNANELRVYDAQSHVLLQTLSTHGKGGVGGNARGIKQNDGRLVAVVNNGSNSVALFRRDGDVLKFDKVVPTTSAPVSVDF
Ga0268264_106947873	3300028381	Switchgrass Rhizosphere	MFRRNVLGVIVAVLALAAGSGGIYANGTHGRTLVVTMTNDPDANQVKVYDAQSHVLLQTLSAHGRGGVGGNARGIKQNDGILVAVVNNGSNSVALFRR
Ga0247820_113586192	3300028597	Soil	MSRLKVLGAMVAGLALTAATTAIHASDHRHTLVTMTNDAESNQIKVYDAESHVLLQTLSTHGKGGAGGNARGIKQYNGRLVAVVNNGSGNVALFRRDGDALR
Ga0247827_101971242	3300028889	Soil	MSRLKVLGAMVAGLALTAATTAIHASDHRHTLVVTMTNDAESNQIKVYDAESHVLLQTLSTHGKGGAGGNARGIKQYNGRLVAVVN
Ga0307498_102720952	3300031170	Soil	MLRRNVLGVIVAVLAYAAGGAGIHASGGHGRTLVVTMTNDPNVNQIRVYDAESHVLLQTLSTHGKGGVGGNARGVKQHDGRLVAVVNNGSNSVALFTRDGD
Ga0310887_108002322	3300031547	Soil	MLKFKVLSAALAFLGIAAATAGVHASGHRRTLVVTMTNDQDSNEIKVYDAESHALLQTLSTHGKGGVGGNARGIKQYNGGLVAAVNNGSGS
Ga0310886_101137571	3300031562	Soil	MFKRNTLDVIVVVLALAAGGAGMHASGGHGRTLVVTMTNDPNANQIRVYDAESNALLQTLSTHGTGGVGGNARGVKQNDGRLVAVVNNGSNSVALFRRDGDRLKFD
Ga0310886_105778901	3300031562	Soil	MMKFKVLSAVLASLAIGAVTAGVHATGQRRTLVVTMTNDENSNQIKVYDAESHALLQTLSTHGKGGVGGNLRGIKQYDGGLVAAVNNGSGSVAVFRRDGDGLKFEKVIPTTS
Ga0310813_100834121	3300031716	Soil	MFRRNVLGVIVAVLALAAGSGGIYANGTHGRTLVVTMTNDPDANQVKVYDAQSHVLLQTLSAHGRGGVGGNARGIKQNDGILVAVVNNGSNSVALFRRDGDVLKFDRTVSTTSAPVSVDF
Ga0310813_117998352	3300031716	Soil	MFKLRMLCAVTSTLLAIGAGTIHASGHARTLVLTMTNDPQGNQLKVYDADSRALLQTLSTHGKGGAGGNARGITRDDGRLVAVVNNGSNTVA
Ga0318546_107902212	3300031771	Soil	MPRVRSVYTIVAGLAIVAAATRIHASGDARTLVITTTNDTQTNEIRVYDAGTHALIQTLSTHGKGGVGGNARGIRQHAHSLVAVVNNGSNSVALFRRDGDSLRFEKLVTTSSAPVSVDFGNDHM
Ga0310904_107878152	3300031854	Soil	MFKLSNVFTAVVCLALAAGATRIHANGHERTLVVTMTNEPDANQINVYDADSHALLQTLSTHGKGGAGGNARGIKQYDRTLVAVVNNGSNSVALFKRNGDALRFDKLV
Ga0310900_100970791	3300031908	Soil	MLKFRVLSAALAFLAIAAATAGVQASGHRRTLVVTMTNDQDSNEIKVYDAESHALLQTLSTHGKGGVGGNARGIKQYNGGLVAAVNNGSGSVAVFRRDGDALKF
Ga0310900_107718102	3300031908	Soil	MPRLKVLYATVAVLALAAGGAGIHASDRHGRTLVITMTNDPNANQLRVYDAQSHVLLQTLSTHGKGGVGGNARGVKQHDGKLVAAVNNGSNSVAVFRRDGDLL
Ga0308174_110269171	3300031939	Soil	MFKRNVLGVIVASVAFAAGGTGIRAAGGHERTLVVTMTNDRTANQLKVYDAQSHELLQTLSTHGQGGVGGNARGIKQYDRRLVAVVNNGSNSVALFRRDGDVLNFDEVVSTTSAPVSVDF
Ga0310884_100802221	3300031944	Soil	MSRLKVLGAMVAGLALTAATTAIHASDHRHTLVVTMTNDAESNQIKVYDAESHVLLQTLSTRGKGGAGGNARGIKQYNGRLVAVVNNGSGNVALFRRDGDALRFDKVVATTSAPVS
Ga0310889_100554442	3300032179	Soil	MSRLKVLGAMVAGLALTAATTAIHASDHRHTLVVTMTNDAESNQIKVYDAESHVLLQTLSTHGKGGAGGNARGIKQYNGRLVAVVNNGSGNVALFRRDGDALRFDKVVATTS
Ga0310896_101041703	3300032211	Soil	MFEVNVMLKFRVLSAALAFLAIAAATAGVQASGHRRTLVVTMTNDQDSNEIKVYDAESHALLQTLSTHGKGGVGSNARGIKQYNGGLVAAVNNGSGSVAVFRRDGDALKFEKVIQTTSAPVSVDF
Ga0306920_1013874051	3300032261	Soil	MNKSVTLTVAALTLAVTTGGVGIHASGHQRTLVVTMTNDVNTNQIQVYDAETHALLQTLSTRGKGGAAGNARGIRQLDGSLVAVVNNGSNTVALFRRVGDALKFDQLVSTTSAPVSVDFG
Ga0335084_111053271	3300033004	Soil	MRVFLTFKENVMSRLKMLCTATACLAFAAGAVGIHASGHDRTLVVTMTNDADSNQIKVYDAGSHALLQTLSTHGRGGAGGNARGIRQHDGALVAVVNNGSN
Ga0335084_112749712	3300033004	Soil	MSRFNVSCTVVACLAFAAGATGIHASGRGRTLVVTMTNDQNANQLKVYDADSHVLLQTLSTHGKGGVGGNARGIKQHDGRLVAVVNNGSNTVA

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.50
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.50
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F061033

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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