NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F061002

Metagenome / Metatranscriptome Family F061002

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F061002
Family Type Metagenome / Metatranscriptome
Number of Sequences 132
Average Sequence Length 67 residues
Representative Sequence MGAFARFAAACILGALGLMPQGAATAAELIILTNQGATPGVRELAAAFARASGHKVAVLQEEG
Number of Associated Samples 123
Number of Associated Scaffolds 132

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 96.30 %
% of genes near scaffold ends (potentially truncated) 60.61 %
% of genes from short scaffolds (< 2000 bps) 58.33 %
Associated GOLD sequencing projects 120
AlphaFold2 3D model prediction Yes
3D model pTM-score0.50

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (56.818 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(9.091 % of family members)
Environment Ontology (ENVO) Unclassified
(28.788 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(39.394 % of family members)


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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Fibrous Signal Peptide: Yes Secondary Structure distribution: α-helix: 34.07%    β-sheet: 13.19%    Coil/Unstructured: 52.75%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.50
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 132 Family Scaffolds
PF03724META 11.36
PF01909NTP_transf_2 1.52
PF00857Isochorismatase 1.52
PF01797Y1_Tnp 1.52
PF02211NHase_beta 0.76
PF06224HTH_42 0.76
PF13432TPR_16 0.76
PF00583Acetyltransf_1 0.76
PF00909Ammonium_transp 0.76
PF13302Acetyltransf_3 0.76
PF08450SGL 0.76
PF04389Peptidase_M28 0.76
PF00091Tubulin 0.76
PF09720Unstab_antitox 0.76
PF13607Succ_CoA_lig 0.76
PF13271DUF4062 0.76
PF10282Lactonase 0.76
PF00437T2SSE 0.76
PF00753Lactamase_B 0.76
PF04239DUF421 0.76
PF13531SBP_bac_11 0.76
PF00441Acyl-CoA_dh_1 0.76
PF13245AAA_19 0.76
PF00116COX2 0.76
PF13378MR_MLE_C 0.76
PF00561Abhydrolase_1 0.76

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 132 Family Scaffolds
COG3187Heat shock protein HslJPosttranslational modification, protein turnover, chaperones [O] 11.36
COG1335Nicotinamidase-related amidaseCoenzyme transport and metabolism [H] 1.52
COG1535Isochorismate hydrolaseSecondary metabolites biosynthesis, transport and catabolism [Q] 1.52
COG1943REP element-mobilizing transposase RayTMobilome: prophages, transposons [X] 1.52
COG0004Ammonia channel protein AmtBInorganic ion transport and metabolism [P] 0.76
COG1622Heme/copper-type cytochrome/quinol oxidase, subunit 2Energy production and conversion [C] 0.76
COG1960Acyl-CoA dehydrogenase related to the alkylation response protein AidBLipid transport and metabolism [I] 0.76
COG2323Uncharacterized membrane protein YcaP, DUF421 familyFunction unknown [S] 0.76
COG3214DNA glycosylase YcaQ, repair of DNA interstrand crosslinksReplication, recombination and repair [L] 0.76
COG3386Sugar lactone lactonase YvrECarbohydrate transport and metabolism [G] 0.76
COG3391DNA-binding beta-propeller fold protein YncEGeneral function prediction only [R] 0.76
COG4263Nitrous oxide reductaseInorganic ion transport and metabolism [P] 0.76

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms56.82 %
UnclassifiedrootN/A43.18 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300002245|JGIcombinedJ26739_101054506All Organisms → cellular organisms → Bacteria → Proteobacteria699Open in IMG/M
3300004092|Ga0062389_104617960All Organisms → cellular organisms → Bacteria518Open in IMG/M
3300004153|Ga0063455_101571467Not Available517Open in IMG/M
3300004463|Ga0063356_100289891All Organisms → cellular organisms → Bacteria2020Open in IMG/M
3300004463|Ga0063356_101394515All Organisms → cellular organisms → Bacteria → Proteobacteria1031Open in IMG/M
3300005167|Ga0066672_10748458All Organisms → cellular organisms → Bacteria → Proteobacteria621Open in IMG/M
3300005178|Ga0066688_10273606All Organisms → cellular organisms → Bacteria1085Open in IMG/M
3300005293|Ga0065715_10685530All Organisms → cellular organisms → Bacteria660Open in IMG/M
3300005293|Ga0065715_10938019All Organisms → cellular organisms → Bacteria563Open in IMG/M
3300005294|Ga0065705_10777706All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales619Open in IMG/M
3300005334|Ga0068869_101935358All Organisms → cellular organisms → Bacteria529Open in IMG/M
3300005345|Ga0070692_10178297All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis1230Open in IMG/M
3300005355|Ga0070671_100955922All Organisms → cellular organisms → Bacteria750Open in IMG/M
3300005355|Ga0070671_101312040All Organisms → cellular organisms → Bacteria638Open in IMG/M
3300005364|Ga0070673_100545484All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis1053Open in IMG/M
3300005440|Ga0070705_101456030All Organisms → cellular organisms → Bacteria572Open in IMG/M
3300005445|Ga0070708_101225133All Organisms → cellular organisms → Bacteria702Open in IMG/M
3300005450|Ga0066682_10894542All Organisms → cellular organisms → Bacteria529Open in IMG/M
3300005466|Ga0070685_10782426All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis702Open in IMG/M
3300005530|Ga0070679_101458004All Organisms → cellular organisms → Bacteria631Open in IMG/M
3300005543|Ga0070672_101861957All Organisms → cellular organisms → Bacteria → Proteobacteria → Hydrogenophilalia → Hydrogenophilales → Hydrogenophilaceae → Tepidiphilus → Tepidiphilus margaritifer541Open in IMG/M
3300005564|Ga0070664_101367767All Organisms → cellular organisms → Bacteria669Open in IMG/M
3300005574|Ga0066694_10322818All Organisms → cellular organisms → Bacteria734Open in IMG/M
3300005602|Ga0070762_10881689All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales609Open in IMG/M
3300005713|Ga0066905_101642898All Organisms → cellular organisms → Bacteria589Open in IMG/M
3300005842|Ga0068858_100705365All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria982Open in IMG/M
3300005843|Ga0068860_102655077All Organisms → cellular organisms → Bacteria520Open in IMG/M
3300006086|Ga0075019_10147896All Organisms → cellular organisms → Bacteria1372Open in IMG/M
3300006844|Ga0075428_101515681All Organisms → cellular organisms → Bacteria702Open in IMG/M
3300006845|Ga0075421_100860148All Organisms → cellular organisms → Bacteria1038Open in IMG/M
3300006852|Ga0075433_10036480All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium4236Open in IMG/M
3300006853|Ga0075420_100745691Not Available844Open in IMG/M
3300006871|Ga0075434_101116518Not Available801Open in IMG/M
3300007004|Ga0079218_14004375All Organisms → cellular organisms → Bacteria501Open in IMG/M
3300009162|Ga0075423_11084098All Organisms → cellular organisms → Bacteria852Open in IMG/M
3300009162|Ga0075423_12725409All Organisms → cellular organisms → Bacteria541Open in IMG/M
3300009610|Ga0105340_1544464All Organisms → cellular organisms → Bacteria519Open in IMG/M
3300010366|Ga0126379_12997855All Organisms → cellular organisms → Bacteria565Open in IMG/M
3300010397|Ga0134124_12671772Not Available542Open in IMG/M
3300011423|Ga0137436_1015884All Organisms → cellular organisms → Bacteria1851Open in IMG/M
3300012902|Ga0157291_10270269All Organisms → cellular organisms → Bacteria575Open in IMG/M
3300012977|Ga0134087_10137254All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → Sphingomonas segetis1054Open in IMG/M
3300013296|Ga0157374_10270110All Organisms → cellular organisms → Bacteria → Acidobacteria1676Open in IMG/M
3300014262|Ga0075301_1031425All Organisms → cellular organisms → Bacteria951Open in IMG/M
3300015359|Ga0134085_10137363All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1032Open in IMG/M
3300018056|Ga0184623_10208378All Organisms → cellular organisms → Bacteria898Open in IMG/M
3300018081|Ga0184625_10188964All Organisms → cellular organisms → Bacteria → Acidobacteria1079Open in IMG/M
3300018422|Ga0190265_11925064All Organisms → cellular organisms → Bacteria698Open in IMG/M
3300018422|Ga0190265_12968746All Organisms → cellular organisms → Bacteria567Open in IMG/M
3300019229|Ga0180116_1053306All Organisms → cellular organisms → Bacteria1215Open in IMG/M
3300021171|Ga0210405_10296563All Organisms → cellular organisms → Bacteria1278Open in IMG/M
3300021357|Ga0213870_1038403All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1604Open in IMG/M
3300021445|Ga0182009_10611256All Organisms → cellular organisms → Bacteria → Acidobacteria584Open in IMG/M
3300022756|Ga0222622_11410616Not Available513Open in IMG/M
3300025900|Ga0207710_10446651All Organisms → cellular organisms → Bacteria667Open in IMG/M
3300025920|Ga0207649_10444978All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis977Open in IMG/M
3300025925|Ga0207650_10594128All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis930Open in IMG/M
3300025932|Ga0207690_10256206All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis1354Open in IMG/M
3300025933|Ga0207706_10089333All Organisms → cellular organisms → Bacteria → Acidobacteria2709Open in IMG/M
3300025936|Ga0207670_10318431All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis1223Open in IMG/M
3300025937|Ga0207669_11072789All Organisms → cellular organisms → Bacteria679Open in IMG/M
3300025938|Ga0207704_10121437All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis1789Open in IMG/M
3300025940|Ga0207691_11398186All Organisms → cellular organisms → Bacteria575Open in IMG/M
3300026095|Ga0207676_10519080All Organisms → cellular organisms → Bacteria → Acidobacteria1134Open in IMG/M
3300026121|Ga0207683_12086459All Organisms → cellular organisms → Bacteria515Open in IMG/M
3300026285|Ga0209438_1003970All Organisms → cellular organisms → Bacteria → Proteobacteria5022Open in IMG/M
3300026298|Ga0209236_1146177All Organisms → cellular organisms → Bacteria1006Open in IMG/M
3300026508|Ga0257161_1028959All Organisms → cellular organisms → Bacteria1082Open in IMG/M
3300028381|Ga0268264_10395771All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis1326Open in IMG/M
3300030990|Ga0308178_1163870All Organisms → cellular organisms → Bacteria520Open in IMG/M
3300031099|Ga0308181_1171960All Organisms → cellular organisms → Bacteria520Open in IMG/M
3300031421|Ga0308194_10258432All Organisms → cellular organisms → Bacteria587Open in IMG/M
3300031538|Ga0310888_10354619All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis851Open in IMG/M
3300031708|Ga0310686_111299960All Organisms → cellular organisms → Bacteria843Open in IMG/M
3300031716|Ga0310813_10289859All Organisms → cellular organisms → Bacteria1377Open in IMG/M
3300031740|Ga0307468_101032608All Organisms → cellular organisms → Bacteria726Open in IMG/M
3300031890|Ga0306925_12129187All Organisms → cellular organisms → Bacteria524Open in IMG/M
3300031913|Ga0310891_10084262All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis953Open in IMG/M
3300031943|Ga0310885_10851063All Organisms → cellular organisms → Bacteria520Open in IMG/M
3300032012|Ga0310902_10262898All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis1045Open in IMG/M
3300034268|Ga0372943_1025730Not Available550Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil9.09%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil6.06%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere6.06%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil5.30%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment5.30%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil5.30%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil3.79%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil3.79%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere3.79%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil3.03%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere3.03%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere3.03%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere3.03%
BogEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog2.27%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil2.27%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere2.27%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere2.27%
Natural And Restored WetlandsEnvironmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands1.52%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil1.52%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil1.52%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil1.52%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere1.52%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere1.52%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere1.52%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment0.76%
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater0.76%
Bog Forest SoilEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil0.76%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds0.76%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment0.76%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.76%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil0.76%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil0.76%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil0.76%
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil0.76%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere0.76%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.76%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil0.76%
Natural And Restored WetlandsEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands0.76%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Soil0.76%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil0.76%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil0.76%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil0.76%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere0.76%
Groundwater SandEnvironmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand0.76%
SedimentEnvironmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment0.76%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere0.76%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere0.76%
Miscanthus RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere0.76%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.76%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.76%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300002245Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)EnvironmentalOpen in IMG/M
3300004013Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailA_D2EnvironmentalOpen in IMG/M
3300004092Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3EnvironmentalOpen in IMG/M
3300004153Grasslands soil microbial communities from Hopland, California, USA (version 2)EnvironmentalOpen in IMG/M
3300004463Combined assembly of Arabidopsis thaliana microbial communitiesHost-AssociatedOpen in IMG/M
3300005093Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All BlocksEnvironmentalOpen in IMG/M
3300005167Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121EnvironmentalOpen in IMG/M
3300005177Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139EnvironmentalOpen in IMG/M
3300005178Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137EnvironmentalOpen in IMG/M
3300005293Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1Host-AssociatedOpen in IMG/M
3300005294Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk SoilEnvironmentalOpen in IMG/M
3300005334Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2Host-AssociatedOpen in IMG/M
3300005345Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaGEnvironmentalOpen in IMG/M
3300005355Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaGHost-AssociatedOpen in IMG/M
3300005364Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaGHost-AssociatedOpen in IMG/M
3300005440Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaGEnvironmentalOpen in IMG/M
3300005445Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaGEnvironmentalOpen in IMG/M
3300005450Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131EnvironmentalOpen in IMG/M
3300005466Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaGEnvironmentalOpen in IMG/M
3300005530Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaGEnvironmentalOpen in IMG/M
3300005531Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen12_06102014_R2EnvironmentalOpen in IMG/M
3300005543Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaGHost-AssociatedOpen in IMG/M
3300005564Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaGHost-AssociatedOpen in IMG/M
3300005574Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143EnvironmentalOpen in IMG/M
3300005577Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2Host-AssociatedOpen in IMG/M
3300005602Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2EnvironmentalOpen in IMG/M
3300005713Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)EnvironmentalOpen in IMG/M
3300005842Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2Host-AssociatedOpen in IMG/M
3300005843Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2Host-AssociatedOpen in IMG/M
3300005994Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049EnvironmentalOpen in IMG/M
3300006086Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013EnvironmentalOpen in IMG/M
3300006237Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)Host-AssociatedOpen in IMG/M
3300006844Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2Host-AssociatedOpen in IMG/M
3300006845Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5Host-AssociatedOpen in IMG/M
3300006852Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2Host-AssociatedOpen in IMG/M
3300006853Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4Host-AssociatedOpen in IMG/M
3300006871Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3Host-AssociatedOpen in IMG/M
3300007004Agricultural soil microbial communities from Utah to study Nitrogen management - NC CompostEnvironmentalOpen in IMG/M
3300009088Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaGEnvironmentalOpen in IMG/M
3300009094Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009162Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2Host-AssociatedOpen in IMG/M
3300009610Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT700EnvironmentalOpen in IMG/M
3300010366Tropical forest soil microbial communities from Panama - MetaG Plot_24EnvironmentalOpen in IMG/M
3300010379Sb_50d combined assemblyEnvironmentalOpen in IMG/M
3300010397Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4EnvironmentalOpen in IMG/M
3300011417Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT500_2EnvironmentalOpen in IMG/M
3300011423Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT119_2EnvironmentalOpen in IMG/M
3300011444Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT800_2EnvironmentalOpen in IMG/M
3300011445Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT700_2EnvironmentalOpen in IMG/M
3300012122Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT200_2EnvironmentalOpen in IMG/M
3300012203Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaGEnvironmentalOpen in IMG/M
3300012208Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012683Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaGEnvironmentalOpen in IMG/M
3300012902Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S169-409C-1EnvironmentalOpen in IMG/M
3300012957Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MGEnvironmentalOpen in IMG/M
3300012977Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300013296Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaGHost-AssociatedOpen in IMG/M
3300014164Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaGEnvironmentalOpen in IMG/M
3300014262Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleA_D1EnvironmentalOpen in IMG/M
3300014657Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaGEnvironmentalOpen in IMG/M
3300014866Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT890_16_10DEnvironmentalOpen in IMG/M
3300015359Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015EnvironmentalOpen in IMG/M
3300016319Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00HEnvironmentalOpen in IMG/M
3300016357Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000EnvironmentalOpen in IMG/M
3300017988Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_30_metaGEnvironmentalOpen in IMG/M
3300018052Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b2EnvironmentalOpen in IMG/M
3300018053Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_b1EnvironmentalOpen in IMG/M
3300018056Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_b1EnvironmentalOpen in IMG/M
3300018077Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b1EnvironmentalOpen in IMG/M
3300018081Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1EnvironmentalOpen in IMG/M
3300018082Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b2EnvironmentalOpen in IMG/M
3300018422Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 TEnvironmentalOpen in IMG/M
3300018429Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 TEnvironmentalOpen in IMG/M
3300019229Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT660_1_16_1Ra (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300020582Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-OEnvironmentalOpen in IMG/M
3300021171Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-MEnvironmentalOpen in IMG/M
3300021357Freshwater microbial communities from subterranean cave lake in Wind Cave National Park, South Dakota, United States - WICALVC2017EnvironmentalOpen in IMG/M
3300021403Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-OEnvironmentalOpen in IMG/M
3300021420Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-MEnvironmentalOpen in IMG/M
3300021445Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaGEnvironmentalOpen in IMG/M
3300022756Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1EnvironmentalOpen in IMG/M
3300025567Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailA_D2 (SPAdes)EnvironmentalOpen in IMG/M
3300025885Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025900Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025920Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025925Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025932Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025933Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025936Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025937Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025938Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025940Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026089Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026095Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026121Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026285Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026298Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm (SPAdes)EnvironmentalOpen in IMG/M
3300026508Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-01-AEnvironmentalOpen in IMG/M
3300027546Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M3 (SPAdes)EnvironmentalOpen in IMG/M
3300027952Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_0_10 (SPAdes)EnvironmentalOpen in IMG/M
3300028381Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300028819Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153EnvironmentalOpen in IMG/M
3300030990Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_149 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031099Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_152 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031421Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_195 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031538Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1EnvironmentalOpen in IMG/M
3300031708FICUS49499 Metagenome Czech Republic combined assemblyEnvironmentalOpen in IMG/M
3300031716Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3EnvironmentalOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M
3300031740Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05EnvironmentalOpen in IMG/M
3300031890Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)EnvironmentalOpen in IMG/M
3300031913Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D4EnvironmentalOpen in IMG/M
3300031943Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D2EnvironmentalOpen in IMG/M
3300032003Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D1EnvironmentalOpen in IMG/M
3300032012Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3EnvironmentalOpen in IMG/M
3300032059Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27EnvironmentalOpen in IMG/M
3300032094Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25EnvironmentalOpen in IMG/M
3300032174Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05EnvironmentalOpen in IMG/M
3300032179Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D2EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300033412Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NCEnvironmentalOpen in IMG/M
3300034268Forest soil microbial communities from Eldorado National Forest, California, USA - SNFC_MG_FRD_1.2EnvironmentalOpen in IMG/M
3300034417Sediment microbial communities from East River floodplain, Colorado, United States - 17_s17EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGIcombinedJ26739_10105450613300002245Forest SoilMGACGRVACILGVLGALPHGAVQAAELTILTNQGATPGVRELAAAFERASGHKVTVIQETLDQRLA
Ga0055465_1029731823300004013Natural And Restored WetlandsMRTCTKFAAACILGALVWMPQTATTAAELVILTNQGATPGVRELAAAFARMSGHKVTVMQEEGAALERRINSGPADLVTGNPPTIEQLV
Ga0062389_10461796013300004092Bog Forest SoilMGGHAKVGAACVLGMLVLAAPGSSLQGAAGAAELVIITNQGATPGVRELATAFARESGHKVTVIQ
Ga0063455_10157146713300004153SoilMRSHTRIATACVLGFVLPGLPGAAHTAELIISSNQGATPGVRELANAFTRASGHKVTVVQEAGAALEKRLN
Ga0063356_10028989133300004463Arabidopsis Thaliana RhizosphereMSACARFAAACILGALVSQTATTAAELVILTNQGATPGVKELAAAFERLSGHKVTVIQEE
Ga0063356_10139451513300004463Arabidopsis Thaliana RhizosphereMRACARRAAACLFGVWAMMPRAAAAADLVVLTNQGATPGVKELAAAFERASGHKVSVIQVEGDALEQRIAS
Ga0062594_10271048623300005093SoilMRACTKFAAACILGALVWMPQTATTAAELVILTNQGATPGVRELAAAFERVSGHKVTVIQEEGATLERRIEKGPAD
Ga0066672_1074845823300005167SoilMRTWATLTAGILGIFGSLPQGAAVAADLVILTNQGATPGVRELAAAFSRASGHKVT
Ga0066690_1098808723300005177SoilMITCSKFAAACILVAMASWPHGTAGAAELVVLANQGATPGVREVGSAFTQASGHKVTVMQPAASALEQLVNNGPADLITSNPEPIE
Ga0066688_1027360633300005178SoilMLERDWGEAMGSCAKFAAACILGTLGSIWGGVAMAADLVILTNQGATPGVKELAAAFSRASGH
Ga0065715_1068553033300005293Miscanthus RhizosphereMRACARFAAACLLGVLAMMPRVAAAADLVVLTNQGATPGVKELAAAFERASGHKVSVIQ
Ga0065715_1093801913300005293Miscanthus RhizosphereMRLPARFVAACLVGALGLMPRGASAANLVILTNQGATPGVKELAAAFERASGHTVTVMQVEGDALEQRIASGPADLV
Ga0065705_1077770613300005294Switchgrass RhizosphereMRASTKFAAACILGALVSVPQGAALAADLIILTNQGATPGVKELAAAFSRMSGHNVTVIQ
Ga0068869_10193535823300005334Miscanthus RhizosphereMRACARFAAACLLGVLAMMPRVAAAADLVVLTNQGATPGVKELAAAFERASGHKVSVIQVEGDALEQRIASGSA
Ga0070692_1017829713300005345Corn, Switchgrass And Miscanthus RhizosphereMRACARFVAAYLFGFLAVMPRAAAGADLVILTNQGATPGVKELAAAFERASGHKVSVIQVEGDALEQRIANGSADLVTANPP
Ga0070692_1026197623300005345Corn, Switchgrass And Miscanthus RhizosphereMRACAKFVAACIVGALVPQGAVLAAELIILTNQGATPGVRELAVAFERASGHKVIVIQEEGAALEKRINTG
Ga0070671_10095592233300005355Switchgrass RhizosphereMGPCAKFSAACLMGAMAVMSAPATAASDLIVLTNQGATPGVRELAAAFSRASGHHVTVIQQEADTLEQRINTGPADLVTANPGAIE
Ga0070671_10131204023300005355Switchgrass RhizosphereMRACARFTAACLFGFLAMMPRAAAAADLVILTNQGATPGVKELAAAFARASG
Ga0070673_10054548433300005364Switchgrass RhizosphereMRACARFAAACLLGVLAMMPRVAAAADLVVLTNQGATPGVKELA
Ga0070705_10145603023300005440Corn, Switchgrass And Miscanthus RhizosphereMRPSARLAAACLLGALGLLPRAAVAADLVILTNQGATPGVKELAAAFERA
Ga0070708_10122513313300005445Corn, Switchgrass And Miscanthus RhizosphereMGVRATFVAACMLGALGLMPRGAATAADLIILTNQGATPGVRELGAAFKRASGHKVTVIQEEG
Ga0066682_1089454213300005450SoilMGNCAKFAAACILGVLGSIPHGAAMAADLVILTNQGATPGVRELAAAFSRASGH
Ga0070685_1078242633300005466Switchgrass RhizosphereMRPCARRAAACLFGVWAMMPRAAAAADLVVLTNQGATPGVKELAAAFERAS
Ga0070679_10145800413300005530Corn RhizosphereMRACARFTAACLFGFLAMMPRAAAAADLVILTNQGATPGVKELAAAFARASGH
Ga0070738_1007615813300005531Surface SoilMGARKKLVAACMLAGLSLGVAGSLTHAAAVAAELTVLTNQGATPGVRELAAAFERVSGHKVTVIQEDAA
Ga0070672_10186195713300005543Miscanthus RhizosphereLKIGFRPLTACQSSGAMRPSARLAAACLLGALGLLPRAAVAADLVILTNQGATPGVKELAAAFERASGHRVTVTQVE
Ga0070664_10136776713300005564Corn RhizosphereMRACARFTAACLFGFLAMMPRAAAAADLVILTNQGATPGVKELAAAFARASGHKVSVIQVEGDA
Ga0066694_1032281813300005574SoilMGACAKFAVAGVLGVLASLPQASAEAADLIILTNQGATPGVRELATAFTRASGHK
Ga0068857_10256946623300005577Corn RhizosphereMGVRAIFVAACMLGALGLMPQAAATAADLIILTNQGATPGVRELAAAFARASGHKVTVIQEEGAALEQRINTGPADLVTGNP
Ga0070762_1088168913300005602SoilMGACGRVACILGVLGALPHGAVQAAELTILTNQGATPGVRELAAAFERASGHKVTVIQET
Ga0066905_10164289823300005713Tropical Forest SoilMRACTKFAAACILGALIWMPQSATTAAQLVILTNQGATPGVRELAAAFERISGHKVTVMQEEGAALERR
Ga0068858_10070536513300005842Switchgrass RhizosphereMRACARFAAACLLGVLAMMPRVAAAADLVVLTNQGATPGVKELAAAFERASGHKVSVIQVEGDALEQRIASGSADLV
Ga0068860_10265507723300005843Switchgrass RhizosphereMRACARFAAACLLGVLAMMPRVAAAADLVVLTNQGATPGVKELAAAFERASGHKVSVIQVEGDALEQRIAS
Ga0066789_1037324413300005994SoilMGACGEIAAACIRAVVPGIMLGILGALPPGAARAAELTVLTNQGATPGVREVAAAFA
Ga0075019_1014789643300006086WatershedsMGACGKFGAACILGVLSLGVPGPLPPGAAVAAELVVLTNQGATPGVREVAAAFERASGHKVT
Ga0097621_10023010833300006237Miscanthus RhizosphereMGRSARFAAAILGTLTATPHGAALAADLTILTNQGATPGVRELAAAFSRASGHKVTVVQAEDAVLERKLND
Ga0075428_10151568113300006844Populus RhizosphereMRMRATFVAACLLGALGLMSQGAASAADLIILTNQGATPGVKELAAAFARASGHKVTVIQEEGA
Ga0075421_10086014823300006845Populus RhizosphereMRACTKFAAACILGALIWIPQTATTAAELVILTNQGATPGVRELAAAFERVSGHKVTV
Ga0075433_1003648063300006852Populus RhizosphereMRACARFAAACLLGVLAMMPRVAAAADLVVLTNQGATPGVKELAAAFERASGHKVSVIQVEGDA
Ga0075420_10074569113300006853Populus RhizosphereMRAVAKFGAACILLALGGGAASAADLIILTNQGATPGVRELANAFSAKGKHKVTVIQAE
Ga0075434_10111651813300006871Populus RhizosphereMKACTTLAAACIVGALGLTTHGAAAPAELVILTNQGATPGVRALADAFARASGNKVTV
Ga0079218_1400437513300007004Agricultural SoilMGACARLTAACILGVLALTPQRTSTAADLIILTNQGATPGVRALADAFSRAS
Ga0099830_1082019333300009088Vadose Zone SoilMKSWAKFAAACILGALGSIPHGAAMAADLVILTNQGATPGVRELAAAFSRANGHHVTVIQADDAVLQQR
Ga0111539_1291445623300009094Populus RhizosphereMRACAKFVAACIVGALVPQGAVLAAELIILTNQGATPGVRELAVAFERASGHKVIVIQEEGAALEKRINTGPA
Ga0075423_1108409833300009162Populus RhizosphereMKACTTLAAACIVGALGLITHGAAAPAELVILTNQGATPGVRALADAFARASGNKVTVVQVEGDALAR
Ga0075423_1272540913300009162Populus RhizosphereMRSSARFAAVCLFGALGVMPRAAAAADLVILTNQGATPGVKELAAAFQRASGHKVTVMQV
Ga0105340_154446423300009610SoilMRACAKFVAACIVGALVPQGAVLAAELIILTNQGATPGVRELAVAFERASGHKVIV
Ga0126379_1299785533300010366Tropical Forest SoilMRACKFAAAGILAVMVLGGFGSSPQATLKAAQLIVVTNQGATPGVRELAAAFERASGHKVTVIQEDAGALE
Ga0136449_10365478613300010379Peatlands SoilMRASAKFTAACILGILGLSQQGAAVAAELIVLTNQGATPGVRELGDAFARMTGHKVTVIQEGGAALDRRLAD
Ga0134124_1267177223300010397Terrestrial SoilMTGARFAAACVLGVLGLETASAAELVISSNQGATPGVRELAAAFSQKSGHKVT
Ga0137326_116299113300011417SoilMLGALGLMPQGAATAADLIILTNQGATPGVKELAAAFARSSGHKVTVIQEEGAALEQRINTGPADL
Ga0137436_101588433300011423SoilMGACGKLAAACILGILLGVLGSLPQGAAVAAELTVLTNQGATPGVRELAAAFSRASGHKVTVIQPAGAALE
Ga0137463_123576423300011444SoilMGACGKLAAACILGILLGVLGSLPQGAAVAAELTVLTNQGATPGVRELAA
Ga0137427_1046371113300011445SoilMRAVAKFGAACILLALGAGAASAADLIILTNQGATPGVRELANAFSAKGEHKVTVIQAEDAELQ
Ga0137332_103692613300012122SoilMRVCAKFAAACILGALVPQGAALAADLIILTNQGATPGVRELAAAFARTSGHKVTVIQAEDKELQQRLNA
Ga0137399_1146436923300012203Vadose Zone SoilMGACRTFAAACILGFLGAQGAADAADLVIISNQGATPGVVELANAFGRSNGHKVTVIQEAGAELDKRLAAGGQADLIASNPGPIVDLIK
Ga0137376_1127935513300012208Vadose Zone SoilMLAALGLMSHGAAAAVELVILSNQGATPGVRELAAVFARASGHRVTVIQVEGAELDRRINSGPADL
Ga0137398_1058008713300012683Vadose Zone SoilMGACSTFAATCILGVIPGIIPAIILGVLGSLPQGAAQAAELTVLTGQGATPG
Ga0157291_1027026933300012902SoilMRPSATFAAACLMGALVLVPRAAAAADLVILTNQGATPGVKELAVAFERASGHKVTVTQVEGDAL
Ga0164303_1152615913300012957SoilMLDRECEGAMKTCAKFAAACILVVLGSIPHGAAMAADLVILTNQGATPGVRELAAGFSRA
Ga0134087_1013725413300012977Grasslands SoilMLERDWGEAMGSCAKFAAACILGTLGSIWGGVAMAADLVILTNQGATPGVKELAAAFSRA
Ga0157374_1027011043300013296Miscanthus RhizosphereVEDAMRACARFVAAYLFGFLAVMPRAAAGADLVILTNQGATPGVKELAAAFERASGHKVSVIQVEGDALEQRIANGSADLVTGT
Ga0181532_1041216813300014164BogMRTCGKFVAACILGVLGLSTPGAAIAAELIVLTNQGATPGVREVAAAFARASGHKVTVLQEAGPALEQRINNGPADLITSNPEPIAEL
Ga0075301_103142513300014262Natural And Restored WetlandsMGVRAVFVAACVLGILGSMPHRAAMAADLVILTNQGATPGVKELAAAFARASGHRVTVIQEE
Ga0181522_1091419913300014657BogMRTCGKFVAACILGVLGLSTPGAAIAAELIVLTNQGATPGVRELAAAFSRVSGHKVTVIQEAGPALDRRLAADAPVDLITSN
Ga0180090_108770613300014866SoilVLGLGSRLFEPAADRGQREEAMRACAKFVAACIVGALVPQGAVLAAELIILTNQGATPGVRELAVAFERASGHKVIVIQEEGAALEKRINTGPADL
Ga0134085_1013736323300015359Grasslands SoilMRACAKFAAACILGAALGSQGAALAGELVILTNQGATPGVRELAAAFERASGHKVTVIQE
Ga0182033_1160258513300016319SoilMGTCSKFAAACVLVVFGSILHGAAMAADLVILTNQGATPGVRELAAAFSRATGHH
Ga0182032_1189839823300016357SoilMVGRRKFATVSVLAGLAGGFSLAAAAAELTVITNQGATPGVREVAAAFARTSGH
Ga0181520_1090723623300017988BogMGACGKFAAACILGMLGSLPQGAAGAAELVILTNQGVTPGVREVAAAFERAS
Ga0184638_111661513300018052Groundwater SedimentMGVRATFVAACMLGALGLMPQGAATAADLIILTNQGATPGVRELAAAFARASGHKVTVIQEEGAALEQKINTGPADLV
Ga0184626_1015001423300018053Groundwater SedimentMGVRATFIAACMLGALGLMPQGAATAADLIILTNQGATPGVKELAAAFARASGHKVTVIQEEGAALEQRINSGPADLVTGNP
Ga0184623_1020837813300018056Groundwater SedimentMGAFARFAAACILGALGLMPQGAATAAELIILTNQGATPGVRELAAAFARASGHK
Ga0184633_1014346623300018077Groundwater SedimentMRACAKFAAACILGALVPQGAALAAELIILTNQGATPGVRELATAFERASGHKVTVIQEEGAALERRINNGPADLVTGNPP
Ga0184633_1049775413300018077Groundwater SedimentMGACARFVAACILGALGLMPQGAATAAELIILTNQGATPGVRELAAAFARASGHKVTVIQEEGAALERRINNGPA
Ga0184625_1018896423300018081Groundwater SedimentMRACAKFVAACIVGALVPQGAVLAAELIILTNQGATPGVRELAVAFERASGHKVIVIQEEGAALE
Ga0184639_1035688713300018082Groundwater SedimentMGVCVRFAAVCILGALGLMPQGAATAAELIILTNQGATPGVRELAAAFARASGHKVTVIQEEGAALERRINNGPADL
Ga0190265_1192506413300018422SoilMGAFARFTAACILGVLGLMPQGAATAATLVILTNQGATPGVRELAAAFSRAS
Ga0190265_1296874623300018422SoilMRACAKFAAACILGAALSSQGAALAAELIILTNQGATPGVRELGAAFERASGHKVTVIQEEGA
Ga0190272_1016356513300018429SoilMRACAKFAAACIVGATLGSQDAALAAELIILTNQGATPGVRELGSAFERASGHKVTVIQEEGAALEQRLSNGRADLITGNPGVIDGY
Ga0180116_105330613300019229Groundwater SedimentMRVHATFVAACMLGALGLMPQGAATAADLIILTNQGATPGVKELAAALARSSGHKVTVIQEEGAALEQ
Ga0210395_1039181923300020582SoilMGGCRRFAAACILGVLGSLPQGAAGAAELVILTNQGVTPGVREVAAAFERSS
Ga0210405_1029656313300021171SoilMSLPAGAWRKFATASLLGALAGLPQAVQAAELVVVTNQGATPGVRELAAAFARASGHKVT
Ga0213870_103840313300021357FreshwaterMGAFARFAAACILGALGLMPQGAATAAELIILTNQGATPGVRELAAAFARASGHKVAVLQEEG
Ga0210397_1157634323300021403SoilMGGCRKFAAACILGVLGSLPQGAAGAAELVILTNQGVTPGVREVAAAFERSSGNKVTVIQEAGPPLERRLASNGPADLIASNPSGIE
Ga0210394_1081826613300021420SoilMGADATFAAAFVWGILTLFPLAAAQAAEFTILTNQGATPGVRELAAAFERASGNKVTVLQETGPALEQRL
Ga0182009_1061125613300021445SoilMRVLTTASAALCLAFVLLMQPDAATAADLVILANQGAMPGVKELAAAFERMSGNKVTVVQVE
Ga0222622_1141061613300022756Groundwater SedimentMRACAKFAAACILGAAWGSQGAALAAELIIVTNQGATPGVRELGAAFERASGHKVTVIQEEGAALERRLN
Ga0210076_110108613300025567Natural And Restored WetlandsMRTCTKFAAACILGALVWMPQTATTAAELVILTNQGATPGVRELAAAFARMSGHKVTVMQEEGAALERRINSGPADLVTGNPPTIEQLVK
Ga0207653_1028762313300025885Corn, Switchgrass And Miscanthus RhizosphereMRACAKFVAACIVGALVPQGAVLAAELVILTNQGATPGVRELAVAFERASGHKVIVIQEEGGALEKRIDTGPADLVTGNPPAIEALV
Ga0207710_1044665113300025900Switchgrass RhizosphereMRACARFAAACLFGFLAVMPRAAAGADLVILTNQGATPGVKELAAAFERASGHKVTVIQVEGDA
Ga0207649_1044497833300025920Corn RhizosphereMRACARRAAACLFGVWAMMPRAAAAADLVVLTNQGATPGVKELAAAFERASGHKVSVIQVEGDALEQRIASG
Ga0207650_1059412833300025925Switchgrass RhizosphereMRPCARRAAACLFGVWAMMPRAAAAADLVVLTNQGATPGVKELAAAFERASGHKVSVIQ
Ga0207690_1025620613300025932Corn RhizosphereMRACARRAAACLFGVWAMMPRAAAAADLVVLTNQGATPGVKELAAAFERASGHKVSVIQV
Ga0207706_1008933313300025933Corn RhizosphereMRACARFAAACLLGVLAMMPRVAAAADLVVLTNQGATPGVKELAAAFERASGHKVSVIQVEGDALEQRIASGS
Ga0207670_1031843113300025936Switchgrass RhizosphereMRACARFAAACLLGVLAMMPRVAAAADLVVLTNQGATPGVKELAAAFERASGHKVSVIQV
Ga0207669_1107278923300025937Miscanthus RhizosphereMRACAGFVVACLVGAMGLMPRAVAAADLVILTNQGATPGVKELAAAFERASGHKVSVIQVEGDALDQRIAGGSADLVTANPPAIE
Ga0207704_1012143743300025938Miscanthus RhizosphereMRACARFAAACLLGVLAMMPRVAAAADLVVLTNQGATPGVKELAAAFER
Ga0207691_1139818613300025940Miscanthus RhizosphereLKIGFRPLTACQSSGAMRPSARLAAACLLGALGLLPRAAVAADLVILTNQGATPGVKELAAAFERASGHRVTVTQVEGDALERRI
Ga0207648_1043196313300026089Miscanthus RhizosphereMGACAKFAAACVVVAVGVMPLRAAGPVELVILTNQGATPGVRELAAAFARASGHKVTVIQEEGAALEQRIRSGPADLVTGNPD
Ga0207676_1051908013300026095Switchgrass RhizosphereMRACARFAAACLFGFLAVMPRAAAGADLVILTNQGATPGVKALAAAFERASGHKVSVIQVEGDALGQKIAS
Ga0207683_1208645923300026121Miscanthus RhizosphereMRVRGTFVAACMLGVLGLIPPGAATAADLIILTNQGATPGVRELAAAFARASGHKVTVIQEEG
Ga0209438_100397033300026285Grasslands SoilMNACAKFAAVCLLAGLALTPRGTSAAAELVILTNQGATPGVKELGTR
Ga0209236_114617723300026298Grasslands SoilMRACAKFAAACILGAALGSQGAALGAELVILTNQGATPGVRELAAAFERASGHK
Ga0257161_102895933300026508SoilMRVSAGARGKFAAACILGVILGFTGSLPPGAAQAAELVVLTNQGATPGVRELAAAFARASGHKVTV
Ga0208984_112101813300027546Forest SoilMEACRTFAAACILGLLGAQGAAGAADLVILSNQGATPGVSELAAAFGRANGHKVTVIQEAGPELDKRLVAGGQADLIA
Ga0209889_110897113300027952Groundwater SandMRACAKFAAACMLVALGLMLHGASAAAELIILTNQGATPGVRELAGAFSQASRHKVTVIQEAGAALERRL
Ga0268264_1039577113300028381Switchgrass RhizosphereMRACARFAAACLLGVLAMMPRVAAAADLVVLTNQGATPGVKELAAAFERASGHK
Ga0307296_1062404113300028819SoilMGVRATFVAACMLGALGLMSQGAATAADLIILTNQGATPGVRELATAFARASGHRVTVVQEEGAALERRIDSGPADLVTGNPGTIDELVKNHKVVASTVT
Ga0308178_116387023300030990SoilMGACAKFAVAGVLGVLASLPQASAEAADLIILTNQGATPGVRELAIAFTRASGHKATVIQEAGE
Ga0308181_117196023300031099SoilMGACAKFAVAGVLGVLASLPQASAEAADLIILTNQGATPGVRELATAFTRAN
Ga0308194_1025843213300031421SoilMGACAKFAVAGVLGVLASLPQASAEAADLIILTNQGATPGVRELATAFTRASGHKVTVIQEA
Ga0310888_1009664323300031538SoilMRACTKFAAACILGALIWMPQTATTAAELVILTNQGATPGVRELAAAFERVSGHKVTVIQEEGATLERRIEKGPADL
Ga0310888_1035461913300031538SoilMRACARFAAACLFGFLAVMPRAAAGADLVILTNQGATPGVKELAAAFERASGHKVSVIQVEGDALGQKIAS
Ga0310686_11129996013300031708SoilMGACGRFAAACIVGVLGSLSQGAAGAAELVILTNQGVTPGVREVAAAFERASGNKVTVIQEAGPPLE
Ga0310813_1028985933300031716SoilMRACARFAAACLFVFLAVMPRAAAGADLVILTNQGATPGVKELAAAFERA
Ga0307469_1035212423300031720Hardwood Forest SoilMGMRATFVAACIVGALGLLPRGAATAADLIILTNQGATPGVKELAAAFSRASGHKVTVTQEEGTALEQRIDSGLADLVTGNPGTIDELV
Ga0307468_10046691823300031740Hardwood Forest SoilMRGCAKFAAACILGAAFGSQGAVLAAELIILTNQGATPGVRELAVAFERASGHKVTVIQEEGAAMERRLNS
Ga0307468_10103260833300031740Hardwood Forest SoilMRARARFAAACLLGVLGWMPRPVAAADLVILTNQGATPGVKELATAFEHASRHKVT
Ga0306925_1212918723300031890SoilMEACGKFAATCVLGVLGLGVSGSLPQGAATAAELVILTNQGATPGVRELAAAFERASGHKVTVIQ
Ga0310891_1008426233300031913SoilMRACARFAAACLFGFLAVMPRAAAGADLVILTNQGATPGVKELAAAFERASGHKVSVIQVEGDALEQRIASGSADLV
Ga0310885_1085106313300031943SoilMRVRGTFVAACMLGVLGLIPPGAATAADLIILTNQGATPGVRELAAAFARASGHKVT
Ga0310897_1068349313300032003SoilMRACTKFAAACILGALIWMPQTATTAAELVILTNQGATPGVRELAAAFERVSGHKVTVIQEEGATLERRIEKGPADLVTGNPPAIEQFVKNG
Ga0310902_1026289813300032012SoilMRACARFAAACLFGFLAVMPRAAAGADLVILTNQGATPGVKELAAAFERASGHKV
Ga0318533_1129670623300032059SoilMEACGKFAATCVLGVLGLGVSGSLPQGAATAAELVILTNQGATPGVRELAAAFERASGHKVTVIQEAGPALDQRL
Ga0318540_1056909213300032094SoilMEVCGKFATACILGVLGSLPQGPAEAAELVILTNQGVTPGVREVAAAFEHSSGNKVTVIQEAGPALERRLASNGPADLVA
Ga0307470_1147654723300032174Hardwood Forest SoilMRACAKFVAVCVLGIALAFTSQRAATAAELIILTNQGATPGVKALADAFARASGHKVTVIQVEGDALERRIESGSADLVTGNPE
Ga0310889_1025716823300032179SoilMRACTKFAAACILGALIWMPQTATTAAELVILTNQGATPGVRELAAAFERVSGHKVTVIQEEGATLERRIEKGPADLV
Ga0307471_10228129323300032180Hardwood Forest SoilMGACGKFAAACILGVLLGVLGSLPQGAAVAAELTVLTNQGATPGVRELAAAF
Ga0310810_1141154613300033412SoilMRACAKFAAACILGAAFGSQGAVLAAELIILTNQGATPGVRELAGAFERASGHKVTVIQEEGAALERRLNSGGADLITGNPGPIENL
Ga0372943_1025730_3_2153300034268SoilMGACGKVAAACIRAVIPGMMLGMLGASPQGAAQSAELTVLTNQGATPGVREVAAAFSRASGHQVTVIQEAL
Ga0364941_004356_2171_23953300034417SedimentMLGALGLMPRGAATAADLIILTNQGATPGVKELAAAFARSSGHKVTVIQEEGAALEQRINTGPADLVTGNPPTIE

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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