Metagenome / Metatranscriptome Family F060755

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F060755
Family Type	Metagenome / Metatranscriptome
Number of Sequences	132
Average Sequence Length	71 residues
Representative Sequence	MQILIRFPDEETEQRALGKLIPRFSGKSWASGETAVPAQALGFLAEQGIKFTVIGPAPYEFITPVRDPGAVAV
Number of Associated Samples	100
Number of Associated Scaffolds	132

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	47.69 %
% of genes near scaffold ends (potentially truncated)	28.79 %
% of genes from short scaffolds (< 2000 bps)	84.85 %
Associated GOLD sequencing projects	92
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.50

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (96.212 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (33.333 % of family members)
Environment Ontology (ENVO)	Unclassified (37.879 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (40.152 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 19.80% β-sheet: 16.83% Coil/Unstructured: 63.37%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.50
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.50
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 132 Family Scaffolds
PF00005	ABC_tran	4.55
PF09720	Unstab_antitox	2.27
PF11159	DUF2939	1.52
PF02452	PemK_toxin	1.52
PF01709	Transcrip_reg	1.52
PF03808	Glyco_tran_WecG	1.52
PF00009	GTP_EFTU	1.52
PF10143	PhosphMutase	1.52
PF01676	Metalloenzyme	1.52
PF00106	adh_short	0.76
PF02604	PhdYeFM_antitox	0.76
PF16912	Glu_dehyd_C	0.76
PF12831	FAD_oxidored	0.76
PF13470	PIN_3	0.76
PF05635	23S_rRNA_IVP	0.76
PF01168	Ala_racemase_N	0.76
PF16326	ABC_tran_CTD	0.76
PF04820	Trp_halogenase	0.76
PF01927	Mut7-C	0.76
PF00255	GSHPx	0.76
PF01402	RHH_1	0.76
PF13701	DDE_Tnp_1_4	0.76
PF07722	Peptidase_C26	0.76
PF00113	Enolase_C	0.76
PF14235	DUF4337	0.76
PF01850	PIN	0.76
PF00749	tRNA-synt_1c	0.76
PF01075	Glyco_transf_9	0.76
PF00580	UvrD-helicase	0.76
PF01895	PhoU	0.76
PF01381	HTH_3	0.76
PF13304	AAA_21	0.76
PF00701	DHDPS	0.76
PF00529	CusB_dom_1	0.76
PF02738	MoCoBD_1	0.76
PF03972	MmgE_PrpD	0.76
PF13407	Peripla_BP_4	0.76
PF01548	DEDD_Tnp_IS110	0.76
PF02641	DUF190	0.76
PF01863	YgjP-like	0.76
PF01370	Epimerase	0.76
PF10518	TAT_signal	0.76
PF12698	ABC2_membrane_3	0.76
PF07394	DUF1501	0.76
PF03144	GTP_EFTU_D2	0.76

COG ID	Name	Functional Category	% Frequency in 132 Family Scaffolds
COG0217	Transcriptional and/or translational regulatory protein YebC/TACO1	Translation, ribosomal structure and biogenesis [J]	1.52
COG0329	4-hydroxy-tetrahydrodipicolinate synthase/N-acetylneuraminate lyase	Cell wall/membrane/envelope biogenesis [M]	1.52
COG1922	UDP-N-acetyl-D-mannosaminuronic acid transferase, WecB/TagA/CpsF family	Cell wall/membrane/envelope biogenesis [M]	1.52
COG2337	mRNA-degrading endonuclease MazF, toxin component of the MazEF toxin-antitoxin module	Defense mechanisms [V]	1.52
COG0008	Glutamyl- or glutaminyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.76
COG0148	Enolase	Carbohydrate transport and metabolism [G]	0.76
COG0210	Superfamily I DNA or RNA helicase	Replication, recombination and repair [L]	0.76
COG0386	Thioredoxin/glutathione peroxidase BtuE, reduces lipid peroxides	Defense mechanisms [V]	0.76
COG0859	ADP-heptose:LPS heptosyltransferase	Cell wall/membrane/envelope biogenesis [M]	0.76
COG1074	3Ã¢â‚¬â„¢-5Ã¢â‚¬â„¢ helicase subunit RecB of the DNA repair enzyme RecBCD (exonuclease V)	Replication, recombination and repair [L]	0.76
COG1451	UTP pyrophosphatase, metal-dependent hydrolase family	General function prediction only [R]	0.76
COG1656	Uncharacterized conserved protein, contains PIN-related Mut7-C RNAse domain	General function prediction only [R]	0.76
COG1993	PII-like signaling protein	Signal transduction mechanisms [T]	0.76
COG2079	2-methylcitrate dehydratase PrpD	Carbohydrate transport and metabolism [G]	0.76
COG2161	Antitoxin component YafN of the YafNO toxin-antitoxin module, PHD/YefM family	Defense mechanisms [V]	0.76
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.76
COG3973	DNA helicase IV	Replication, recombination and repair [L]	0.76
COG4118	Antitoxin component of toxin-antitoxin stability system, DNA-binding transcriptional repressor	Defense mechanisms [V]	0.76

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	96.21 %
Unclassified	root	N/A	3.79 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	96.21 %
Unclassified	root	N/A	3.79 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	96.21 %
Unclassified	root	N/A	3.79 %

Name	Rank	Taxonomy	Distribution
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	60.61 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	9.85 %
Unclassified	root	N/A	3.79 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.52 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → environmental samples	0.76 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	0.76 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	59.85 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	7.58 %
Unclassified	root	N/A	3.79 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	2.27 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	1.52 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.76 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.76 %
Nitrospira	class	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira	0.76 %

Name	Rank	Taxonomy	Distribution
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	23.48 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	7.58 %
Verrucomicrobiae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae	6.06 %
Unclassified	root	N/A	3.79 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1.52 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	1.52 %
Nitrospirales	order	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales	0.76 %
unclassified Planctomycetota	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota	0.76 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	0.76 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.76 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	23.48 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	7.58 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	6.06 %
Unclassified	root	N/A	3.79 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1.52 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.76 %
unclassified Nitrospirales	no rank	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → unclassified Nitrospirales	0.76 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	0.76 %
Bryobacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae	0.76 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.76 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	23.48 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	7.58 %
Verrucomicrobia subdivision 3	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3	6.06 %
Unclassified	root	N/A	3.79 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1.52 %
unclassified Bryobacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae	0.76 %
Nitrospirales bacterium	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → unclassified Nitrospirales → Nitrospirales bacterium	0.76 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.76 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.76 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.76 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	23.48 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	7.58 %
Unclassified	root	N/A	3.79 %
unclassified Verrucomicrobia subdivision 3	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3	3.03 %
Pedosphaera	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera	3.03 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1.52 %
Bryobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae → Bryobacteraceae bacterium	0.76 %
Nitrospirales bacterium	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → unclassified Nitrospirales → Nitrospirales bacterium	0.76 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.76 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.76 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.76 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	23.48 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	7.58 %
Unclassified	root	N/A	3.79 %
Verrucomicrobia subdivision 3 bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	3.03 %
unclassified Pedosphaera	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → unclassified Pedosphaera	1.52 %
Pedosphaera parvula	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	1.52 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1.52 %
Bryobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae → Bryobacteraceae bacterium	0.76 %
Nitrospirales bacterium	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → unclassified Nitrospirales → Nitrospirales bacterium	0.76 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.76 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.76 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.76 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	23.48 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	7.58 %
Unclassified	root	N/A	3.79 %
Verrucomicrobia subdivision 3 bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	3.03 %
Pedosphaera sp. Tous-C6FEB	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → unclassified Pedosphaera → Pedosphaera sp. Tous-C6FEB	1.52 %
Pedosphaera parvula	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	1.52 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1.52 %
Bryobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae → Bryobacteraceae bacterium	0.76 %
Nitrospirales bacterium	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → unclassified Nitrospirales → Nitrospirales bacterium	0.76 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.76 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.76 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.76 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090014\|GPIPI_17176555	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	5943	Open in IMG/M
3300001356\|JGI12269J14319_10341029	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	530	Open in IMG/M
3300004092\|Ga0062389_103316407	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	603	Open in IMG/M
3300005166\|Ga0066674_10308895	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	743	Open in IMG/M
3300005174\|Ga0066680_10147285	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	1471	Open in IMG/M
3300005175\|Ga0066673_10805572	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	537	Open in IMG/M
3300005180\|Ga0066685_10098883	All Organisms → cellular organisms → Bacteria	1946	Open in IMG/M
3300005180\|Ga0066685_10319734	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1076	Open in IMG/M
3300005181\|Ga0066678_10856814	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	597	Open in IMG/M
3300005184\|Ga0066671_10330221	All Organisms → cellular organisms → Bacteria	963	Open in IMG/M
3300005187\|Ga0066675_10657857	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	787	Open in IMG/M
3300005446\|Ga0066686_10564511	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	773	Open in IMG/M
3300005540\|Ga0066697_10332326	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	888	Open in IMG/M
3300005569\|Ga0066705_10548774	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	717	Open in IMG/M
3300005575\|Ga0066702_10200368	All Organisms → cellular organisms → Bacteria	1208	Open in IMG/M
3300005577\|Ga0068857_100011538	All Organisms → cellular organisms → Bacteria	7688	Open in IMG/M
3300005598\|Ga0066706_10455287	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1019	Open in IMG/M
3300006046\|Ga0066652_101952227	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	525	Open in IMG/M
3300006795\|Ga0075520_1004942	All Organisms → cellular organisms → Bacteria	6750	Open in IMG/M
3300006796\|Ga0066665_10748947	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	773	Open in IMG/M
3300006796\|Ga0066665_11143006	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	593	Open in IMG/M
3300006797\|Ga0066659_10251779	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	1322	Open in IMG/M
3300006800\|Ga0066660_10605834	All Organisms → cellular organisms → Bacteria	915	Open in IMG/M
3300009012\|Ga0066710_100329709	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2248	Open in IMG/M
3300009012\|Ga0066710_100460213	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1909	Open in IMG/M
3300009012\|Ga0066710_104813250	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	505	Open in IMG/M
3300009137\|Ga0066709_100179696	All Organisms → cellular organisms → Bacteria	2752	Open in IMG/M
3300009137\|Ga0066709_102055578	All Organisms → cellular organisms → Bacteria	790	Open in IMG/M
3300009137\|Ga0066709_103500164	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	570	Open in IMG/M
3300009137\|Ga0066709_104561299	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	506	Open in IMG/M
3300009167\|Ga0113563_12270958	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	652	Open in IMG/M
3300009167\|Ga0113563_13566745	All Organisms → cellular organisms → Bacteria	527	Open in IMG/M
3300009547\|Ga0116136_1077503	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	886	Open in IMG/M
3300010304\|Ga0134088_10566593	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → unclassified Nitrospirales → Nitrospirales bacterium	563	Open in IMG/M
3300010362\|Ga0126377_12291938	All Organisms → cellular organisms → Bacteria	616	Open in IMG/M
3300010379\|Ga0136449_102144377	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	818	Open in IMG/M
3300011269\|Ga0137392_10391925	All Organisms → cellular organisms → Bacteria	1152	Open in IMG/M
3300011270\|Ga0137391_11325067	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	567	Open in IMG/M
3300012189\|Ga0137388_11312735	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	662	Open in IMG/M
3300012198\|Ga0137364_10835390	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	696	Open in IMG/M
3300012201\|Ga0137365_11128590	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	563	Open in IMG/M
3300012201\|Ga0137365_11268288	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	524	Open in IMG/M
3300012201\|Ga0137365_11303572	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	515	Open in IMG/M
3300012202\|Ga0137363_10292671	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1335	Open in IMG/M
3300012202\|Ga0137363_10661854	All Organisms → cellular organisms → Bacteria	883	Open in IMG/M
3300012202\|Ga0137363_11188178	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	649	Open in IMG/M
3300012202\|Ga0137363_11354547	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	601	Open in IMG/M
3300012205\|Ga0137362_10543441	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1004	Open in IMG/M
3300012205\|Ga0137362_10783760	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	817	Open in IMG/M
3300012205\|Ga0137362_11312927	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	609	Open in IMG/M
3300012206\|Ga0137380_10286044	All Organisms → cellular organisms → Bacteria	1479	Open in IMG/M
3300012206\|Ga0137380_10814988	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	805	Open in IMG/M
3300012208\|Ga0137376_10346791	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1289	Open in IMG/M
3300012208\|Ga0137376_10945509	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	739	Open in IMG/M
3300012208\|Ga0137376_11029216	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	705	Open in IMG/M
3300012209\|Ga0137379_10618824	Not Available	989	Open in IMG/M
3300012212\|Ga0150985_108285993	All Organisms → cellular organisms → Bacteria	1099	Open in IMG/M
3300012351\|Ga0137386_11263698	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	514	Open in IMG/M
3300012353\|Ga0137367_10594645	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	775	Open in IMG/M
3300012354\|Ga0137366_10272275	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → unclassified Pedosphaera → Pedosphaera sp. Tous-C6FEB	1251	Open in IMG/M
3300012356\|Ga0137371_10156124	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	1789	Open in IMG/M
3300012356\|Ga0137371_10182776	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1643	Open in IMG/M
3300012356\|Ga0137371_10668257	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	796	Open in IMG/M
3300012359\|Ga0137385_10429863	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1123	Open in IMG/M
3300012359\|Ga0137385_10620293	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → unclassified Pedosphaera → Pedosphaera sp. Tous-C6FEB	908	Open in IMG/M
3300012361\|Ga0137360_10845222	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	788	Open in IMG/M
3300012362\|Ga0137361_11274407	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	659	Open in IMG/M
3300012402\|Ga0134059_1219606	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	623	Open in IMG/M
3300012469\|Ga0150984_103383414	All Organisms → cellular organisms → Bacteria	657	Open in IMG/M
3300012469\|Ga0150984_104275025	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	824	Open in IMG/M
3300012469\|Ga0150984_105349078	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	564	Open in IMG/M
3300012582\|Ga0137358_10180522	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1440	Open in IMG/M
3300012917\|Ga0137395_11241085	All Organisms → cellular organisms → Bacteria	519	Open in IMG/M
3300012923\|Ga0137359_10568870	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	996	Open in IMG/M
3300012923\|Ga0137359_11757920	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	507	Open in IMG/M
3300012924\|Ga0137413_11542134	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	541	Open in IMG/M
3300012927\|Ga0137416_11433086	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	626	Open in IMG/M
3300012930\|Ga0137407_10000191	All Organisms → cellular organisms → Bacteria	44778	Open in IMG/M
3300013307\|Ga0157372_11837503	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	697	Open in IMG/M
3300014151\|Ga0181539_1014983	All Organisms → cellular organisms → Bacteria	4739	Open in IMG/M
3300014154\|Ga0134075_10050963	All Organisms → cellular organisms → Bacteria	1709	Open in IMG/M
3300014158\|Ga0181521_10319779	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	789	Open in IMG/M
3300014164\|Ga0181532_10804529	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	504	Open in IMG/M
3300014167\|Ga0181528_10401556	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	747	Open in IMG/M
3300014489\|Ga0182018_10388334	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	748	Open in IMG/M
3300014490\|Ga0182010_10273549	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	902	Open in IMG/M
3300014491\|Ga0182014_10079867	Not Available	2057	Open in IMG/M
3300014501\|Ga0182024_10005981	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	26963	Open in IMG/M
3300014501\|Ga0182024_10035337	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	8407	Open in IMG/M
3300014501\|Ga0182024_10449383	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1653	Open in IMG/M
3300015264\|Ga0137403_10896408	All Organisms → cellular organisms → Bacteria	737	Open in IMG/M
3300017925\|Ga0187856_1021117	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	3320	Open in IMG/M
3300017929\|Ga0187849_1095503	All Organisms → cellular organisms → Bacteria	1270	Open in IMG/M
3300018043\|Ga0187887_10104377	All Organisms → cellular organisms → Bacteria	1707	Open in IMG/M
3300018431\|Ga0066655_10444375	All Organisms → cellular organisms → Bacteria	856	Open in IMG/M
3300018431\|Ga0066655_11140300	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	548	Open in IMG/M
3300018482\|Ga0066669_11864524	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	558	Open in IMG/M
3300019789\|Ga0137408_1247125	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1470	Open in IMG/M
3300019789\|Ga0137408_1265242	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2552	Open in IMG/M
3300020583\|Ga0210401_11384002	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	561	Open in IMG/M
3300021080\|Ga0210382_10304850	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	701	Open in IMG/M
3300021344\|Ga0193719_10247469	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	754	Open in IMG/M
3300021344\|Ga0193719_10413920	Not Available	553	Open in IMG/M
3300023090\|Ga0224558_1017895	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	3749	Open in IMG/M
3300025650\|Ga0209385_1017081	All Organisms → cellular organisms → Bacteria	2964	Open in IMG/M
3300026328\|Ga0209802_1300785	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	531	Open in IMG/M
3300026548\|Ga0209161_10221164	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1023	Open in IMG/M
3300026550\|Ga0209474_10000048	All Organisms → cellular organisms → Bacteria	137039	Open in IMG/M
3300026555\|Ga0179593_1011889	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	2548	Open in IMG/M
3300026557\|Ga0179587_10794306	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	624	Open in IMG/M
3300027819\|Ga0209514_10212178	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	959	Open in IMG/M
3300027854\|Ga0209517_10117071	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1761	Open in IMG/M
3300028536\|Ga0137415_11036434	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	632	Open in IMG/M
3300028558\|Ga0265326_10140159	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	690	Open in IMG/M
3300028573\|Ga0265334_10082356	All Organisms → cellular organisms → Bacteria	1184	Open in IMG/M
3300031057\|Ga0170834_109782229	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	692	Open in IMG/M
3300031525\|Ga0302326_10472820	All Organisms → cellular organisms → Bacteria	1912	Open in IMG/M
3300031576\|Ga0247727_10066577	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	4137	Open in IMG/M
3300031718\|Ga0307474_10331475	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1176	Open in IMG/M
3300031997\|Ga0315278_10378124	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1463	Open in IMG/M
3300031997\|Ga0315278_11774371	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	584	Open in IMG/M
3300032160\|Ga0311301_10415299	All Organisms → cellular organisms → Bacteria	2051	Open in IMG/M
3300032160\|Ga0311301_10505831	All Organisms → cellular organisms → Bacteria	1789	Open in IMG/M
3300032164\|Ga0315283_10290746	All Organisms → cellular organisms → Bacteria	1771	Open in IMG/M
3300032164\|Ga0315283_10550640	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae → Bryobacteraceae bacterium	1252	Open in IMG/M
3300032177\|Ga0315276_11542853	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	690	Open in IMG/M
3300032456\|Ga0335394_11028127	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	551	Open in IMG/M
3300032605\|Ga0316232_1372249	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	515	Open in IMG/M
3300033416\|Ga0316622_100418670	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1510	Open in IMG/M
3300033890\|Ga0334810_087797	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	749	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	93.94%
Host-Associated	Host-Associated	6.06%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	78.79%
Aquatic	Environmental → Aquatic	15.15%
Plants	Host-Associated → Plants	6.06%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	75.76%
Freshwater	Environmental → Aquatic → Freshwater	15.15%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.55%
Peat	Environmental → Terrestrial → Peat	2.27%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.52%
Cave	Environmental → Terrestrial → Cave	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	69.70%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	8.33%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	5.30%
Lake	Environmental → Aquatic → Freshwater → Lake	3.79%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.79%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	2.27%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.76%
Lentic	Environmental → Aquatic → Freshwater → Lentic	0.76%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.76%
Ice	Environmental → Aquatic → Freshwater → Ice	0.76%
Loam	Environmental → Terrestrial → Soil → Loam	0.76%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.76%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.76%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.76%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	41.67%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	24.24%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	6.06%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	4.55%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	3.79%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.79%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	2.27%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	2.27%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	2.27%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	1.52%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.76%
Hypolimnion	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion	0.76%
Contaminated	Environmental → Aquatic → Freshwater → Groundwater → Contaminated	0.76%
Glacial Lake	Environmental → Aquatic → Freshwater → Ice → Glacial Lake	0.76%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.76%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.76%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.76%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.76%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.76%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.76%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	33.33%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	16.67%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	7.58%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	3.79%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	3.79%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	3.03%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	2.27%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	2.27%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	2.27%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	2.27%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	1.52%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.52%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	1.52%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	1.52%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	1.52%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.76%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion → Freshwater	0.76%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.76%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.76%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Contaminated → Groundwater	0.76%
Freshwater	Environmental → Aquatic → Freshwater → Ice → Glacial Lake → Freshwater	0.76%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.76%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.76%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.76%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.76%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	0.76%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	0.76%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	0.76%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.76%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	0.76%
Biofilm	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm	0.76%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.76%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.76%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.76%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090014	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001356	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006795	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-B	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009167	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG - Illumina Assembly (version 2)	Environmental	Open in IMG/M
3300009547	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_40	Environmental	Open in IMG/M
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012402	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_8_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300014151	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_60_metaG	Environmental	Open in IMG/M
3300014154	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015	Environmental	Open in IMG/M
3300014158	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_60_metaG	Environmental	Open in IMG/M
3300014164	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaG	Environmental	Open in IMG/M
3300014167	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_10_metaG	Environmental	Open in IMG/M
3300014489	Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaG	Environmental	Open in IMG/M
3300014490	Permafrost microbial communities from Stordalen Mire, Sweden - 611E1M metaG	Environmental	Open in IMG/M
3300014491	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2D metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300017925	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_40	Environmental	Open in IMG/M
3300017929	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_100	Environmental	Open in IMG/M
3300018043	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_10	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019789	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021080	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo	Environmental	Open in IMG/M
3300021344	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2	Environmental	Open in IMG/M
3300023090	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S3 20-24	Environmental	Open in IMG/M
3300025650	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-B (SPAdes)	Environmental	Open in IMG/M
3300026328	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129 (SPAdes)	Environmental	Open in IMG/M
3300026548	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)	Environmental	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300026555	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027819	Subsurface groundwater microbial communities from S. Glens Falls, New York, USA - GMW37 contaminated, 5.8 m (SPAdes)	Environmental	Open in IMG/M
3300027854	Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028558	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG	Host-Associated	Open in IMG/M
3300028573	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG	Host-Associated	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031576	Biofilm microbial communities from Wishing Well Cave, Virginia, United States - WW16-25	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031997	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G06_0	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032164	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G09_0	Environmental	Open in IMG/M
3300032177	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G05_0	Environmental	Open in IMG/M
3300032456	Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - MAT-03 (spades assembly)	Environmental	Open in IMG/M
3300032605	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18025_13	Environmental	Open in IMG/M
3300033416	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_OW2_C1_D5_C	Environmental	Open in IMG/M
3300033890	Peat soil microbial communities from Stordalen Mire, Sweden - 713 E-1-M	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPIPI_00618460	2088090014	Soil	MQILIRFPDQETEQRALGKLIPRFSGKSWASGETAVPAQALGFLAEEGIKFTVIGPAPYEVITPVRDPGSVAV
JGI12269J14319_103410292	3300001356	Peatlands Soil	MQILIRFADKETEQRALGKLIPRFSGKSWASGETAVPAQALGFLAEQGIKFTVIGPAPYDFITPVRDPGAVAV*
Ga0062389_1033164071	3300004092	Bog Forest Soil	HYILSFAMQILIRFPDKETEKLALGKLIPRFSGKSWETGGTAVPTPALGFLAEQGIKFSVIGPAPYELVTPVRNPGSIAV*
Ga0066674_103088951	3300005166	Soil	TMQILIRFPDKDTEQRALGKLIPRFSGKSWASGETAVPAQALSFLAEQGIKFTVIGPAPYEFVTPVRDTGPVAV*
Ga0066680_101472852	3300005174	Soil	ETEQRALGKLIPRFSGKSWASGETAVPAQALSFLAEQGIQFSVIGPAPYESLTPVRDSGAVAV*
Ga0066673_108055723	3300005175	Soil	PDKETEERALGKLIPRFSGKSWNTGETAVPSPALALLAEEGIAFTVIGPAPYELVTSLRNPGSVVI*
Ga0066685_100988832	3300005180	Soil	MQILIRFPDKDTEQRALGKLIPRFSGKSWASGETAVPAQALSFLAEQGIKFTVIGPAPYEFVTPVRDTGPVAV*
Ga0066685_103197342	3300005180	Soil	MQILIRFPDEETEQRALGKLIPRFSGKSWASGETAVPAQALGFLAEQGIKFTVIGPAPYEFITPVRDPGAVAV*
Ga0066678_108568141	3300005181	Soil	MQILIRFPDKETEQRALGKLIPRFSGKSWASGETAVPAQALSFLAEQGIKFSVIGPAPYESI
Ga0066671_103302211	3300005184	Soil	ALGKLIPRFSGKSWTTGETAVPAQALGFLAEQGIQFTVIGPAPYEYVTPLRNPSTVGVQ*
Ga0066676_103867881	3300005186	Soil	MQILIRFPDQETEQRALGKLIPRFSGKSWASDKTAVPAQALGFLAEQGIKFTVP*
Ga0066675_106578572	3300005187	Soil	LLQEAQRGIITCMRILIRFPDKDTEQRALGKLIPRFSGKSWSSGEVAVPSVALGFLANEGISFTVIGPAPYERLASLRDSGAAVSE*
Ga0066686_105645112	3300005446	Soil	CVASACSSSARTGALLQEAQRGIITCMRILIRFPDKDTEQRALGKLIPRFSGKSWSSGEVAVPSVALGFLANEGISFTVIGPAPYERLASLRDSGAAVSE*
Ga0066697_103323262	3300005540	Soil	MLILIRFPDKEIEQLALGKLIPRFSGKSWASGETAVPAQALGFLAEQGIKFTVIGPAPYEFITPVRDPGAVAV*
Ga0066705_105487742	3300005569	Soil	MQILIKFPNKETETRALEKLIPQFSGKSWETGEMAVPSPALGLLAEEGIAFTVI
Ga0066702_102003681	3300005575	Soil	MQILIRFPDKETEQRALGKLIPRFSGKSWASGETAVPAQALGFLAEQGIKFTVIGPAPYEFITPVRDPGSVA
Ga0068857_1000115383	3300005577	Corn Rhizosphere	MQILIRFPDEDTERQALGKLIPRYSGKSWTSGVTAVPAQALGFLAEQGIKFTVIGPAPYEVITPVRDPGSVAV*
Ga0066706_104552872	3300005598	Soil	MRIFIKFPDSETELRALEKLIPRSSGKSWTTGETAVPAQALGFLAEQGIQFTVIGPAPYEYVTPLRNPSTVHGIQGEIEGPF*
Ga0066652_1019522271	3300006046	Soil	MQILIKFPNKETETRALEKLIPQFSGKSWETGEMAVPSPALGLLAEEGIAFTVIGPAPYELVAALRNPGSVVV*
Ga0075520_10049426	3300006795	Arctic Peat Soil	MQILIKFPDSETERLALGKLIPRFSGKSWDTGETAVPAPALSFLAEQGIPFSVIGPAPYEYVTPLRDTGAVAVQ*
Ga0066665_107489472	3300006796	Soil	MRILIKFPDSETELRALGKLIPRSSGKSWTTGETAVPAQALGFLAEQGIKFSVIGPAPYESLTPVRDSGAVAV*
Ga0066665_111430062	3300006796	Soil	MQILIRFPDKETEQRALGKLIPRFSGKSWASGETAVPAQALSFLAEQGIKFSVIGPAP
Ga0066659_102517791	3300006797	Soil	MQILIRFPDKETEQRALGKLIPRFSGKSWASGETAVPAQALSFLAEQGIQFSVIGPAPYESLTPVRDSGAVAV*
Ga0066660_106058341	3300006800	Soil	TEQRALGKLIPRFSGKSWASGETAVPAQALGFLAEQGIKFTVIGPAPYELITPVRDPGPVVV*
Ga0066710_1003297096	3300009012	Grasslands Soil	MQILIRFPDKDTEQRALGKLIPRFSGKSWASGETAVPAQALSFLAEQGIKFTVIGPAPYEFVTPVRDTGPVAV
Ga0066710_1004602132	3300009012	Grasslands Soil	MRILIRFPDKDTEQRALGKLIPRFSGKSWSSGEVAVPSVALGFLANEGISFTVIGPAPYERLASLRDSGAAVSE
Ga0066710_1048132501	3300009012	Grasslands Soil	MLILIRFPDKETEQLALGKLIPRFSGKSWVSGETAVPAQALGFLAEQGIKFTVIGPAP
Ga0066709_1001796964	3300009137	Grasslands Soil	MRILIRFPDKDTEQRALGKLIPRFSGKSWSSGEVAVPSVALGFLANEGISFTVIGPAPYERLASLRDSGAAVSE*
Ga0066709_1020555782	3300009137	Grasslands Soil	MCHHLAACHCLLWEVTCGMQILIRFPDQETEQLALGKLIPRFSGKSWASGETAVPAQALGFLAEEGIKFTVIGPAPYEVITPVRDPGSVAV*
Ga0066709_1035001641	3300009137	Grasslands Soil	MRIFIKFPDSETELRALGKLIPRSSGKSWTTGETAVPAQALGFLAEQGIQFTVIGPAPYEYVTPLRNPGTVVVQ*
Ga0066709_1045612991	3300009137	Grasslands Soil	MQILIRFPEQETEQRALGKLIPRFSGKSWASGETAIPAQALGYLAEQGVKFTVIGPAPYEFITPVRDPGTVAV*
Ga0113563_122709581	3300009167	Freshwater Wetlands	MQILIRFPDKETEQHALGKLIPRFSGKSWASGETAVPAQALGFLAEQGIKFSVIGPAPDERITPVRDPGAVAV*
Ga0113563_135667451	3300009167	Freshwater Wetlands	MQILIRFPDQETELQALGKLIPRSSGKSWSAGEVALPSAALALLADEGIRFTVVWPAPYERLTSLRDPRAVGV*
Ga0116136_10775033	3300009547	Peatland	MQILIRFADKDTEQRALGKLIPRFSGKSWASGETAVPAQALGFLPEQGIKFTVIGHTPYEFITPVRDPGAVAV*
Ga0134088_105665932	3300010304	Grasslands Soil	MQILIRFPDKETEQRALGKLIPRFSGKSWASGETAVPAQALSFLAEQGIKFSVIGPAPYESLTPVRDSGAVAV*
Ga0126377_122919382	3300010362	Tropical Forest Soil	MQILIRFPDQETVQRALGKLIPRFSGKSWVSGETAVPAQALGFLAEQGIKFTVIGPAPYEIIT
Ga0136449_1021443771	3300010379	Peatlands Soil	MQILIRFPDKETEQRALGKLIPRFSGKSWASGETAVRASALGFLAEQGIKFTVIGLCPNPGLTFSL*
Ga0137392_103919253	3300011269	Vadose Zone Soil	MQILIRFPDEETEQRALGKLIPRFSGKSWASGETAVPAQALGFLAEQGIKFTVIGPAPYELITPVRDPGAVAV*
Ga0137391_113250671	3300011270	Vadose Zone Soil	MQILIRFPDVETEQRALGKLIPRFSGKSWASGETAVPAQALGFLAEQGIKFTVIGPAPYELITPVRDPGAVAV*
Ga0137388_113127352	3300012189	Vadose Zone Soil	MQILIRFPDEETEQRALGKLIPRFSGKSWASGETAVPAQALGFLAEQGIKFTVIGPAPYEFITPVRDSGAVAV*
Ga0137364_108353902	3300012198	Vadose Zone Soil	MQILIKFPNKETETRALEKLIPQFSGKSWETGEMAVPSPALGLLAEEGIAFTVIGS*
Ga0137365_111285901	3300012201	Vadose Zone Soil	MQILIRFPDTETEVRALGKLIPRFSGKSWSSGELAVPSAALSYLANEGISFTVIGPAPYERLAPIRDPGASVV*
Ga0137365_112682882	3300012201	Vadose Zone Soil	MQILIRFPDSETEQRALGKLIPRYSGKSWTTGETAVPAQALGFLAEQGIKFTVIGPAPYELVTPLRDPGAVGV*
Ga0137365_113035721	3300012201	Vadose Zone Soil	MRILIRFPDKETEQRALGKLIPRFSGKSWASGETAVPAQALGFLAEQGIKFSVIGPAPYEFITPVRDSGAVAV*
Ga0137363_102926713	3300012202	Vadose Zone Soil	MQILIRFPDQETEKLALGKLIPRFSGKSWASGETAVPAQALGFLAEQGIRFTVIGPAPYEVITPVRDPGSVAV*
Ga0137363_106618543	3300012202	Vadose Zone Soil	MQILIRFPDKETEQRALGKLIPRFSGKSRASGETAVPAQELSFLAEQGIQFSVIGPAPYESLTPVRNSGAVAV*
Ga0137363_111881781	3300012202	Vadose Zone Soil	MQILIRFPDKETEERALGKLIPRFSGKSWSSGELAVPSAALSYLANEGISFTVIGPAPYERLAPIRDPGASV
Ga0137363_113545472	3300012202	Vadose Zone Soil	MLPSMQILIRFPNKETEQLALGKLIPRFSGKSWSSGETAVPSAALRYLAEQGISFEVVGPAPYERLASLQDSGAPAVQ*
Ga0137362_105434413	3300012205	Vadose Zone Soil	MQILIRFPDKETEQRALGKLIPRFSGKSWESGETAVPAQALGFLAEQGIKFTVIGPAPYDFITPVRDPGSVAV*
Ga0137362_107837601	3300012205	Vadose Zone Soil	MQILIRFPDKETEERALGKLIPRFSGKSWSSGELAVPSAALSYLANEGISFTVIGPAPYERLAPIRDPGASVV*
Ga0137362_113129271	3300012205	Vadose Zone Soil	ETQQRALGKLIPRFSGKSWASGETAVPAQALGFLAEQGIKFTVIGPAPYDFITPVRDPGAVAV*
Ga0137380_102860442	3300012206	Vadose Zone Soil	MQILIKFPDVETESRALGKLIPRFSGKSWSTGETAVPAQALGFLADQGIQFTVIGPAPYEYVTPLRDPSTVGVQ*
Ga0137380_108149883	3300012206	Vadose Zone Soil	MQILIRFPDEKTEQRALGKLIPRFSGKSWASGETAVPAQALGFLAEQGIKFTVIGPAPYEFITPVRDPCAVAV*
Ga0137376_103467912	3300012208	Vadose Zone Soil	MQILIRFPDKATEQRAPGKLIPRFSGKSWSSAETAVPSAALGYLADQGISFQVVGPAPSHPLDVI*
Ga0137376_109455091	3300012208	Vadose Zone Soil	MQILILFPDKETEQQALGKLIPRFSGKSWASGETAVPAQALGFLAEQGIKFSVIGPAPYESITPLRDPGSVAVQ*
Ga0137376_110292161	3300012208	Vadose Zone Soil	AETESRALGMLIPRFSGKSWTTGETAVPAQALAFLAEHGIQFKVIGPAPYEYVTPLRNPGPVAVQ*
Ga0137379_106188242	3300012209	Vadose Zone Soil	RRYLLTVQILIRFPDEEAEARALGTLIPRCCGKSWASGETVVPSEALAYLAEEGIGFVVIGPAPYERLVPGRPSETRGIQ*
Ga0150985_1082859933	3300012212	Avena Fatua Rhizosphere	EDRALGLLIPRFSGKSWKTGETAIPAPALSFLAEQGVRFSVIGPAPYEFVTPVRNSGPVAV*
Ga0137386_112636981	3300012351	Vadose Zone Soil	MLILIRFPDKETEQLALGKLIPRFSGKSWASGETAVPAQALGFLAEQGIKFTVIGPAPYEFIT
Ga0137367_105946452	3300012353	Vadose Zone Soil	MQILIRFPDQETEQRALGKLIPRFSGKSWVSGETAVPAQALGFLAEQNIQFTVIGPAPYEVITPVRDPGAVAV*
Ga0137366_102722751	3300012354	Vadose Zone Soil	MQILIRFPDKETEQRALGKLIPRFSGKSWASGETAVPAQALSFLAEQGFQFSVIGPAPYESLTPVRDSGAVAV*
Ga0137371_101561245	3300012356	Vadose Zone Soil	MQILILFPDKETEQRALGKLIPRFSGKSWASGETAVPAQALSFLAEQGIQFSVIGPAPYESLTPVRDSGAVAV*
Ga0137371_101827763	3300012356	Vadose Zone Soil	MQILIRFPDKETEQRALGKLIPGFSGKSWASGETAVPAQALSFLAEQGIKFSVIGPAPYESLTPVRDSGAVAV*
Ga0137371_106682572	3300012356	Vadose Zone Soil	MQILIRFPDQETEQRALGKLIPRFSGKSWSSGELAVPSAALSYLANEGISFTVIGPAPYERLAPIRDPGASVV*
Ga0137385_104298632	3300012359	Vadose Zone Soil	VQILIRFPDEEAEARALGTLIPRCCGKSWASGETVVPSEALAYLAEEGIGFVVIGPAPYERLVPGRPSETRGIQ*
Ga0137385_106202931	3300012359	Vadose Zone Soil	MQILIRFPDKETEQRALGKLIPRFSGKSWASGETAVPAQALSFLAEQGFQFSAIGPAPYESLTPVRNSGAVAV*
Ga0137360_108452223	3300012361	Vadose Zone Soil	MQILIRFPDEATEQRALGKLIPRFSGKSWASGETAVPAQALGFLAEQGIKFTVIGPAPYEFITPVRDPGAVAV*
Ga0137361_112744072	3300012362	Vadose Zone Soil	DKVTMQILIRFPDKETEARALGKLIPRFSGKSWDTGETAVPSPALALLAEEGIAFTVIGPAPYELVTSLRSPGPVAVQ*
Ga0134059_12196062	3300012402	Grasslands Soil	MQILIRFPDKETEQKALGKLIPRFSGKSWESGETAVSSAALSYLAEEGISFTVIGPAPYERLASLRTPGAAVVQ*
Ga0150984_1033834142	3300012469	Avena Fatua Rhizosphere	MLILIKFPDKETEDVALGKLIPRFSGKSWASGETAVPAAALSFLAEQGIGFTVIGPAPYELLTPVRNPGSIAV*
Ga0150984_1042750251	3300012469	Avena Fatua Rhizosphere	IRFPDQETEKQALGKLIPRFSGKSWASGETAVPAQALGFLAEQGFQFSVIGRAPYEVITPVRDPGSVAV*
Ga0150984_1053490781	3300012469	Avena Fatua Rhizosphere	IRFPDKETELTALGKLIPRFSGKSWSSGEVMVPSAALSYLANEGISFTVIGPAPYERIASLRNTGAVDVQ*
Ga0137358_101805221	3300012582	Vadose Zone Soil	MQILIRFPDKETEARALGKLIPRFSGKSWDTGETAVPSPALALLAEEGIAFTVIGPAPYELVTSLRSPGPVAVQ*
Ga0137395_112410852	3300012917	Vadose Zone Soil	LQNSLTKTRRQSMNNYMRILIRFPDKATEQKALGKLIPRFSGKSWSCGETAVPSAALSYLAEEGISFVVVGPAPYERLAALRDSGAPAAQ*
Ga0137359_105688702	3300012923	Vadose Zone Soil	MQILIRFPDKETEQQALGKLIPRFSGKSWESGETAVPAQALGFLAEQGIKFTVIGPAPYDFITPVRDPGSVAV*
Ga0137359_117579201	3300012923	Vadose Zone Soil	RALGKLIPRFSGKSWNTGETAVPSPALALLAEEGIAFTVIGPAPYELVTSLRNPGSVVV*
Ga0137413_115421341	3300012924	Vadose Zone Soil	MQILIRFPDEETEQRALGKLIPRFSGKSWASGETALPAQALGFLAEQGIKFTVIGPAPYEFITPVRDPGAVAV*
Ga0137416_114330861	3300012927	Vadose Zone Soil	PDQETEQRALGKLIPRFSGKSWASGETAVPAQALGFLAEQGIKFTVIGPDNSPSCGDSK*
Ga0137404_116914902	3300012929	Vadose Zone Soil	MQILIRFPDQETEQRALGKLIPRFSGKSWESGETAVPAQALGFLAEQGIKFT
Ga0137407_100001918	3300012930	Vadose Zone Soil	MQILIKFLNKETETRALEKLIPQFSGKSWETGEMAVPSPALGLLAEEGIAFTVIGPAPYELVTALRNPGSVVV*
Ga0157372_118375032	3300013307	Corn Rhizosphere	MQILIRFPDKETEQRALGKLIPRFSGKSWVSGETAVPAQALGFLAEQGVKFMVIGPAPYESITPVRDPGPIAV*
Ga0181539_10149835	3300014151	Bog	VQILIRFADKETEQRALGKLIPRFSGKSWASGETAVPAQALGFLAEQGINFTVIGPAPYEFITPVRDPGAVAV*
Ga0134075_100509633	3300014154	Grasslands Soil	ILIRFPDKETEQKALGKLIPRFSGKSWESGETAVSSAALSYLAEEGISFTVIGPAPYERLASLRTPGAAVVQ*
Ga0181521_103197792	3300014158	Bog	MQILIRFPDKDTERLALGKLIPRFSGKSWETGETAVPAPALGFLAEQGIKFTVIGPAPYDLVTPVRNPGSVAV*
Ga0181532_108045292	3300014164	Bog	MQILIRFSDKETEQRALGKLIPRFSGKSWASGETAVPAQALGFLAEQGIKFTVIGPAPYEFITPVRDPGAVAV*
Ga0181528_104015561	3300014167	Bog	MQILIKFPDAETERRAWGKLIPRFSGKSWDTGETAVPAPALSFLAEQGIQFSVIGPAPYEYVTP
Ga0182018_103883341	3300014489	Palsa	MQILIRFPDKETEQLALGKLIPQFSGKSWVTGETAVPTPALGFLAERGIKFSVIGPAPYELVTPVRNPGSIAV*
Ga0182010_102735491	3300014490	Fen	MQILIRFPDQDTEQRALGKLIPRFSGKSWASGETAVPAQALGFLAEQGIKFTVIGPAPYEFITPVRDPGAVAV*
Ga0182014_100798672	3300014491	Bog	MQILIRFSDKETEQRALGKLIPRFSGKSWASGETAVPAQALGFLAEQGIKFTVIGPAPYEFITPVRDPGAVAVF*
Ga0182024_1000598123	3300014501	Permafrost	MQILIQFPDKQTEQLALGKLIPRFSGKSWSTGETAVPTPALGFLAEQGIRFTVIGPAPYELVTPVRNPGSVAV*
Ga0182024_100353377	3300014501	Permafrost	MQILIRFPDKETERLALGKLIPRFSGKSWTTGEMAVPSPALGFLAEQGIKFSVMGPAPYELVTPVRNPASVAV*
Ga0182024_104493832	3300014501	Permafrost	LFAVQILIRFPDKETEQLALGKLIPRFSGKSWAAGETAVPTPALGFLAEQGIKFSVIGPAPYELVTPVRNPASLTV*
Ga0137403_108964083	3300015264	Vadose Zone Soil	WAKIRIIMRPVKILIQFPDPATEQRALGKLIPGFSGKSWSTGETAVPAQALGFLAEQGIKFTVIVPASYDFVCR*
Ga0187856_10211173	3300017925	Peatland	MQILIRFADKDTEQRALGKLIPRFSGKSWASGETAVPAQALGFLPEQGIKFTVIGHTPYEFITPVRDPGAVAV
Ga0187849_10955032	3300017929	Peatland	MQILIQFQDKETEQRALGKLIPRFSGKSWASGETAVPAPALSFLAEQGIKFTVIGPAPRRNSSSDSSNSMFG
Ga0187887_101043771	3300018043	Peatland	MQIMIRFSDKETEQRALGKLIPRFSGKSWASGETAVPAQALGFLAEQGIKFTVIGPAPYEFITPVRDPGAVAV
Ga0066655_104443753	3300018431	Grasslands Soil	MRILIKFPDSETEQRALGKLIPRFSGKNWTTGETAVPAQALGFLAEQGIQFTVIGPAPYEYVTPLRNPSTVGVQ
Ga0066655_111403002	3300018431	Grasslands Soil	MQILIRFPDEETEQRALGKLIPRFSGKSWASGETAVPAQALGFLAEQGIKFTVIGPAPYEFITPVRDPGAVAV
Ga0066669_118645242	3300018482	Grasslands Soil	MQILIKFPNKETETRALEKLIPQFSGKSWETGEMAVPSPALGLLAEEGIAFTVIGPAPYELVTSLRNPGSVVV
Ga0137408_12471251	3300019789	Vadose Zone Soil	MQILIKFLNKETETRALEKLIPQFSGKSWETGEMAVPSPALGLLAEEGIAFTVIGPAPYELVTALRNPGSVVV
Ga0137408_12652424	3300019789	Vadose Zone Soil	MQILIKFLNKETETRALEKLIPQFSGKSWETGEMAVPSPALGLLAEEGIAFTVIGPAPYE
Ga0210401_113840022	3300020583	Soil	VQILIQFPDQATEQRALGKLIPRFSGKSWSNGETAVPAQALGFLAEQGIKFTVIGPAPYDFITPVRNPGAVAV
Ga0210382_103048501	3300021080	Groundwater Sediment	MQILIRFPDQETEQRALGMLIPRFSGKSWASGETAVPAQALGFLAEQGIKFTVIGPAPYEFITPVRDSGAVAV
Ga0193719_102474692	3300021344	Soil	MRPIPLIPHGFPDKETEQRALGKLIPRFSGKSWASGETAVPAQALSFLAEQGIQFSVIGPAPYESLTPVRDSGAVAV
Ga0193719_104139202	3300021344	Soil	MQILIRFPDSETEQRALGKLIPRYSGKSWITGETAVPAQALGFLAEQGIKFTVIGPAPYELVTPLRDP
Ga0224558_10178955	3300023090	Soil	MQILIRFSDKETEQRALGKLIPRFSGKSWASGETAVPAQALGFLAEQGIKFTVIGPAPYEFITPVRDPGAVAVF
Ga0209385_10170812	3300025650	Arctic Peat Soil	MQILIKFPDSETERLALGKLIPRFSGKSWDTGETAVPAPALSFLAEQGIPFSVIGPAPYEYVTPLRDTGAVAVQ
Ga0209802_13007851	3300026328	Soil	RFPDKETEQRALGKLIPRFSGKSWASGETAVPAQALSFLAEQGIQFSVIGPAPYESLTPVRDSGAVAV
Ga0209161_102211642	3300026548	Soil	MRIFIKFPDSETELRALEKLIPRSSGKSWTTGETAVPAQALGFLAEQGIQFTVIGPAPYEYVTPLRNPSTVHGIQGEIEGPF
Ga0209474_10000048109	3300026550	Soil	MQILIRFPDKETEELALGKLIPRFSGKSWNTGETAVPSPALALLAEEGIGFTVIGPAPYELVTSLRNPGPITVQ
Ga0179593_10118892	3300026555	Vadose Zone Soil	MQILIRFPDQETEQRALGKLIPRFSGKSWASGETAVPAQALGFLAEQGIKFTVIGPDNSPSCGDSK
Ga0179587_107943061	3300026557	Vadose Zone Soil	MQILIRFPDEETEQRALGKLIPRFSGKSWASGETAVPAQALGFLAEQGIKFTVIGPAPYEFITPVRGPGAVAV
Ga0209514_102121782	3300027819	Groundwater	MQVLIRFPDKAVEEKALGKLIPRFGGKSWTSGETMVPASALAFLAAEGITFTVIGIKNLPPALVLAL
Ga0209517_101170711	3300027854	Peatlands Soil	MQILIRFADKETEQRALGKLIPRFSGKSWASGETAVPAQALGFLAEQGIKFTVIGPAPYDFITPVRDPGAVAV
Ga0137415_110364341	3300028536	Vadose Zone Soil	RFPDQETEQRALGKLIPRFSGKSWASGETAVPAQALGFLAEQGIKFTVIGPDNSPSCGDS
Ga0265326_101401592	3300028558	Rhizosphere	MQILIRFPDKETEQEALGKLIPRFSGKSWASGETAVPAQALGFLAEQGIKFTVMGPAPYEFITPVRDPGSVAV
Ga0265334_100823561	3300028573	Rhizosphere	VQIVIRFPDKETEQRGLGKLIPRFSGKSWASGETAVPAQALGFLAEQGIKFTVIGPAPYD
Ga0170834_1097822291	3300031057	Forest Soil	MQILIRFPDQETELRALGKLIPRFSGKSWASGETAVPAQALGFLAEQGIKFTVIGPDNSPSCGDSK
Ga0302326_104728203	3300031525	Palsa	MQILIQFPDKQTEQLALGKLIPRFSGKSWSTGETAVPAPALGFLAEQGIKFTVIGPAPYELVTPVRNPGSVAV
Ga0247727_100665773	3300031576	Biofilm	MQILIRFPDATTEQKALGRLIPRFSGKSWENGETMVPSEALAFLADEGISFTVIGPAPYERVTSLRDSGAVAVQ
Ga0307474_103314751	3300031718	Hardwood Forest Soil	MQILIRFPDKETEQKALGKLIPRFSGKSWASGETAVPAQALGFLAEEGIKFTVIGPTSYEFMTPVRDPGSVAV
Ga0315278_103781241	3300031997	Sediment	MHILIRFPDEAAERRALSKLNPRFAGKSWSSGETAVPSEALSFLADVGIRFEVIGP
Ga0315278_117743712	3300031997	Sediment	LPKWDGGLRLSGMQILIRFGDQETELRALGKLIPRFSGKSWSSGEVAVPSTALGFLANEGIAFTVIGPAPYERLTSLRDPGPVVV
Ga0311301_104152992	3300032160	Peatlands Soil	MQILIRFPDKETEQRALGKLIPRFSGKSWASGETAVPAQALGFLAEQGIKFTVIGLSIRDLFRAR
Ga0311301_105058311	3300032160	Peatlands Soil	MQILIRFPDKETEQRALGKLIPRFSGKSWASGETAVRASALGFLAEQGIKFTVIGLCPNPGLTFSL
Ga0315283_102907462	3300032164	Sediment	MQVLIRFPDKETEQTALGKLIPRFAGKSWASGETMVPAPALAFLAAEGVSFTVIGPAPYERITSIRDSRAVAV
Ga0315283_105506401	3300032164	Sediment	MQILIRFGDQETELRALGKLIPRFSGKSWSSGEVAVPSTALGFLANEGIAFTVIGPAPYERLTSLRDPGPVVV
Ga0315276_115428531	3300032177	Sediment	MQILIRFSDKETEQRALGKLIPRFSGKSWASGETAVPAQALGFLAEQGIKFTVIGPAPYEFI
Ga0335394_110281271	3300032456	Freshwater	WPLLSSATLRKIAAMQILIRFADKDTEQRALGKLIPRFSGKSWSSGELAVPSAALGYLANEGITFTVIGPAPYERLASLRDPGAAVP
Ga0316232_13722492	3300032605	Freshwater	MQILIRFPDAETERRAWGKLIPRFSGKSWDTGETAVPASALSFLAEQGIQFSVIGPAPYEYVTPLRDSGTVAVQ
Ga0316622_1004186701	3300033416	Soil	ETEQRALGKLIPRFSGKSWASGETAVPATALGFLADEGIQFTVIGPAPYEYVTPLRDLGAVGV
Ga0334810_087797_36_257	3300033890	Soil	MQILIRFPDQDTEQRALGKLIPRFSGKSWASGETAVPAQALGFLAEQGIKFTVIGPAPYEFITPVRDPGAVAV

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F060755

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences