Metagenome / Metatranscriptome Family F060389

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F060389
Family Type	Metagenome / Metatranscriptome
Number of Sequences	133
Average Sequence Length	93 residues
Representative Sequence	MKAGPFLFEAKSGKSRYTRLFACISEEEDGYTVQVALSNETKPDNSAWGEEIVDSFETASELVAALAGEFSIAQACIEIEIRMHNHKHGTRH
Number of Associated Samples	111
Number of Associated Scaffolds	133

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	54.55 %
% of genes near scaffold ends (potentially truncated)	36.09 %
% of genes from short scaffolds (< 2000 bps)	77.44 %
Associated GOLD sequencing projects	102
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.60

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (99.248 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (18.797 % of family members)
Environment Ontology (ENVO)	Unclassified (25.564 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (50.376 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 17.50% β-sheet: 25.00% Coil/Unstructured: 57.50%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.60
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.60
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 133 Family Scaffolds
PF01966	HD	6.77
PF07369	DUF1488	3.76
PF00313	CSD	2.26
PF07883	Cupin_2	1.50
PF10518	TAT_signal	1.50
PF03401	TctC	0.75
PF13531	SBP_bac_11	0.75
PF02353	CMAS	0.75
PF01970	TctA	0.75
PF13458	Peripla_BP_6	0.75
PF03976	PPK2	0.75
PF03006	HlyIII	0.75
PF13343	SBP_bac_6	0.75
PF01547	SBP_bac_1	0.75
PF08327	AHSA1	0.75
PF13492	GAF_3	0.75
PF01936	NYN	0.75
PF03979	Sigma70_r1_1	0.75

COG ID	Name	Functional Category	% Frequency in 133 Family Scaffolds
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	0.75
COG1272	Predicted membrane channel-forming protein YqfA, hemolysin III family	Intracellular trafficking, secretion, and vesicular transport [U]	0.75
COG1432	NYN domain, predicted PIN-related RNAse, tRNA/rRNA maturation	General function prediction only [R]	0.75
COG1784	TctA family transporter	General function prediction only [R]	0.75
COG2226	Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG	Coenzyme transport and metabolism [H]	0.75
COG2227	2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase	Coenzyme transport and metabolism [H]	0.75
COG2230	Cyclopropane fatty-acyl-phospholipid synthase and related methyltransferases	Lipid transport and metabolism [I]	0.75
COG2326	Polyphosphate kinase 2, PPK2 family	Energy production and conversion [C]	0.75
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	0.75
COG3333	TctA family transporter	General function prediction only [R]	0.75

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	99.25 %
Unclassified	root	N/A	0.75 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	99.25 %
Unclassified	root	N/A	0.75 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	99.25 %
Unclassified	root	N/A	0.75 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	96.99 %
Unclassified	root	N/A	0.75 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	93.98 %
Unclassified	root	N/A	0.75 %

Name	Rank	Taxonomy	Distribution
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	64.66 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	12.78 %
Unclassified	root	N/A	0.75 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	64.66 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.75 %
Unclassified	root	N/A	0.75 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	64.66 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.75 %
Unclassified	root	N/A	0.75 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	64.66 %
Bradyrhizobium elkanii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	0.75 %
Unclassified	root	N/A	0.75 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090014\|GPIPI_16698537	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1120	Open in IMG/M
2124908045\|KansclcFeb2_ConsensusfromContig1188655	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1018	Open in IMG/M
3300000156\|NODE_c0513633	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1079	Open in IMG/M
3300000443\|F12B_10134442	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	572	Open in IMG/M
3300000443\|F12B_10134443	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	561	Open in IMG/M
3300000956\|JGI10216J12902_114237958	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	676	Open in IMG/M
3300002906\|JGI25614J43888_10009446	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3155	Open in IMG/M
3300002911\|JGI25390J43892_10174836	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	504	Open in IMG/M
3300005166\|Ga0066674_10085810	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1452	Open in IMG/M
3300005167\|Ga0066672_10456893	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	833	Open in IMG/M
3300005186\|Ga0066676_10170404	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1382	Open in IMG/M
3300005332\|Ga0066388_100111425	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3232	Open in IMG/M
3300005332\|Ga0066388_100845585	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1501	Open in IMG/M
3300005347\|Ga0070668_100577488	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	981	Open in IMG/M
3300005434\|Ga0070709_10012670	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4722	Open in IMG/M
3300005435\|Ga0070714_100984011	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	821	Open in IMG/M
3300005436\|Ga0070713_100078388	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2812	Open in IMG/M
3300005436\|Ga0070713_100157926	All Organisms → cellular organisms → Bacteria	2022	Open in IMG/M
3300005437\|Ga0070710_10057277	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2208	Open in IMG/M
3300005439\|Ga0070711_100084789	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2267	Open in IMG/M
3300005445\|Ga0070708_100454913	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1208	Open in IMG/M
3300005450\|Ga0066682_10887318	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	532	Open in IMG/M
3300005468\|Ga0070707_101582405	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	622	Open in IMG/M
3300005536\|Ga0070697_100165817	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1868	Open in IMG/M
3300005555\|Ga0066692_10341577	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	950	Open in IMG/M
3300005561\|Ga0066699_10134329	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1673	Open in IMG/M
3300005562\|Ga0058697_10432084	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	659	Open in IMG/M
3300005569\|Ga0066705_10400863	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	860	Open in IMG/M
3300005586\|Ga0066691_10209846	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1136	Open in IMG/M
3300005713\|Ga0066905_100184091	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1544	Open in IMG/M
3300005713\|Ga0066905_100808732	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	813	Open in IMG/M
3300005764\|Ga0066903_101917431	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1135	Open in IMG/M
3300005764\|Ga0066903_107108114	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	580	Open in IMG/M
3300006028\|Ga0070717_10145428	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2047	Open in IMG/M
3300006031\|Ga0066651_10643197	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	566	Open in IMG/M
3300006049\|Ga0075417_10181662	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	990	Open in IMG/M
3300006049\|Ga0075417_10293172	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	788	Open in IMG/M
3300006050\|Ga0075028_100300342	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	895	Open in IMG/M
3300006163\|Ga0070715_10343789	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	812	Open in IMG/M
3300006173\|Ga0070716_101272791	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	593	Open in IMG/M
3300006791\|Ga0066653_10182765	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1052	Open in IMG/M
3300006794\|Ga0066658_10208457	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1036	Open in IMG/M
3300006845\|Ga0075421_100017414	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	8989	Open in IMG/M
3300006854\|Ga0075425_101337085	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	812	Open in IMG/M
3300006854\|Ga0075425_101582681	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	739	Open in IMG/M
3300006871\|Ga0075434_100282113	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1680	Open in IMG/M
3300006871\|Ga0075434_100836408	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	936	Open in IMG/M
3300009012\|Ga0066710_101674972	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	969	Open in IMG/M
3300009012\|Ga0066710_102518303	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	743	Open in IMG/M
3300009100\|Ga0075418_10081296	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3446	Open in IMG/M
3300009137\|Ga0066709_100001178	All Organisms → cellular organisms → Bacteria	16661	Open in IMG/M
3300009137\|Ga0066709_102099788	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	781	Open in IMG/M
3300009137\|Ga0066709_102720517	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	659	Open in IMG/M
3300009143\|Ga0099792_11207217	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	513	Open in IMG/M
3300009147\|Ga0114129_10426017	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1744	Open in IMG/M
3300009147\|Ga0114129_10545039	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1509	Open in IMG/M
3300009147\|Ga0114129_11356444	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	879	Open in IMG/M
3300010046\|Ga0126384_12454594	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	505	Open in IMG/M
3300010047\|Ga0126382_10881322	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	772	Open in IMG/M
3300010122\|Ga0127488_1098719	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	510	Open in IMG/M
3300010303\|Ga0134082_10009607	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3475	Open in IMG/M
3300010323\|Ga0134086_10182899	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	777	Open in IMG/M
3300010325\|Ga0134064_10052408	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1253	Open in IMG/M
3300010359\|Ga0126376_13232720	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	504	Open in IMG/M
3300010360\|Ga0126372_10759953	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	955	Open in IMG/M
3300010371\|Ga0134125_10068633	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3944	Open in IMG/M
3300010396\|Ga0134126_11999445	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	634	Open in IMG/M
3300010403\|Ga0134123_10268301	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1496	Open in IMG/M
3300012022\|Ga0120191_10001756	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1912	Open in IMG/M
3300012198\|Ga0137364_10326393	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1142	Open in IMG/M
3300012201\|Ga0137365_10392306	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1024	Open in IMG/M
3300012203\|Ga0137399_11552160	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	550	Open in IMG/M
3300012204\|Ga0137374_10008634	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	12049	Open in IMG/M
3300012205\|Ga0137362_10033636	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4083	Open in IMG/M
3300012206\|Ga0137380_10807707	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	809	Open in IMG/M
3300012206\|Ga0137380_11127045	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	668	Open in IMG/M
3300012208\|Ga0137376_10769836	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	829	Open in IMG/M
3300012209\|Ga0137379_10607802	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1000	Open in IMG/M
3300012209\|Ga0137379_11035731	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	726	Open in IMG/M
3300012211\|Ga0137377_10254511	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1686	Open in IMG/M
3300012211\|Ga0137377_11005742	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	764	Open in IMG/M
3300012349\|Ga0137387_10405269	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	989	Open in IMG/M
3300012350\|Ga0137372_10291517	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1268	Open in IMG/M
3300012355\|Ga0137369_10057603	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3357	Open in IMG/M
3300012355\|Ga0137369_10313804	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1158	Open in IMG/M
3300012358\|Ga0137368_10326264	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1029	Open in IMG/M
3300012359\|Ga0137385_10741432	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	819	Open in IMG/M
3300012582\|Ga0137358_10382083	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	953	Open in IMG/M
3300012915\|Ga0157302_10579806	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	500	Open in IMG/M
3300012923\|Ga0137359_11623450	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	534	Open in IMG/M
3300012951\|Ga0164300_10013302	All Organisms → cellular organisms → Bacteria → Proteobacteria	2666	Open in IMG/M
3300012957\|Ga0164303_10016577	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2734	Open in IMG/M
3300012958\|Ga0164299_10006528	All Organisms → cellular organisms → Bacteria → Proteobacteria	4036	Open in IMG/M
3300012971\|Ga0126369_12638906	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	587	Open in IMG/M
3300012987\|Ga0164307_10965945	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	690	Open in IMG/M
3300012989\|Ga0164305_10052355	All Organisms → cellular organisms → Bacteria → Proteobacteria	2397	Open in IMG/M
3300015356\|Ga0134073_10016561	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1721	Open in IMG/M
3300015357\|Ga0134072_10054238	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1124	Open in IMG/M
3300015371\|Ga0132258_13400436	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1093	Open in IMG/M
3300018431\|Ga0066655_10064071	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1945	Open in IMG/M
3300018431\|Ga0066655_10109251	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1566	Open in IMG/M
3300018433\|Ga0066667_10484500	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1016	Open in IMG/M
3300018433\|Ga0066667_10599349	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	918	Open in IMG/M
3300018482\|Ga0066669_11038847	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	740	Open in IMG/M
3300020199\|Ga0179592_10240346	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	815	Open in IMG/M
3300020579\|Ga0210407_10105064	All Organisms → cellular organisms → Bacteria	2148	Open in IMG/M
3300020579\|Ga0210407_10679923	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	799	Open in IMG/M
3300020580\|Ga0210403_10100989	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2339	Open in IMG/M
3300021168\|Ga0210406_10709492	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	774	Open in IMG/M
3300021560\|Ga0126371_10592955	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1257	Open in IMG/M
3300025905\|Ga0207685_10077493	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1366	Open in IMG/M
3300025915\|Ga0207693_10146051	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1860	Open in IMG/M
3300025916\|Ga0207663_10975570	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	679	Open in IMG/M
3300025939\|Ga0207665_11090823	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	636	Open in IMG/M
3300026295\|Ga0209234_1292188	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	523	Open in IMG/M
3300026317\|Ga0209154_1033595	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2345	Open in IMG/M
3300026326\|Ga0209801_1030840	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2540	Open in IMG/M
3300026343\|Ga0209159_1043213	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2278	Open in IMG/M
3300026557\|Ga0179587_10633180	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	704	Open in IMG/M
3300027643\|Ga0209076_1222798	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	512	Open in IMG/M
3300027873\|Ga0209814_10045438	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1830	Open in IMG/M
3300027873\|Ga0209814_10059122	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1604	Open in IMG/M
3300027903\|Ga0209488_11092013	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	545	Open in IMG/M
3300027909\|Ga0209382_10016840	All Organisms → cellular organisms → Bacteria → Proteobacteria	8909	Open in IMG/M
3300027909\|Ga0209382_10185243	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2393	Open in IMG/M
3300028791\|Ga0307290_10123765	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	946	Open in IMG/M
3300028881\|Ga0307277_10004475	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5364	Open in IMG/M
3300031720\|Ga0307469_10033202	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3028	Open in IMG/M
3300031740\|Ga0307468_100602099	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	897	Open in IMG/M
3300032159\|Ga0268251_10615454	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	501	Open in IMG/M
3300032180\|Ga0307471_100585252	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1274	Open in IMG/M
3300032205\|Ga0307472_100462090	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1082	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	84.96%
Host-Associated	Host-Associated	14.29%
Engineered	Engineered	0.75%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	84.21%
Plants	Host-Associated → Plants	14.29%
Aquatic	Environmental → Aquatic	0.75%
Solid Waste	Engineered → Solid Waste	0.75%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	84.21%
Rhizosphere	Host-Associated → Plants → Rhizosphere	12.03%
Phylloplane	Host-Associated → Plants → Phylloplane	1.50%
Sediment	Environmental → Aquatic → Sediment	0.75%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.75%
Grass	Engineered → Solid Waste → Grass	0.75%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	66.17%
Loam	Environmental → Terrestrial → Soil → Loam	18.05%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	11.28%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified	1.50%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.75%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.75%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.75%
Composting	Engineered → Solid Waste → Grass → Composting	0.75%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	37.59%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	22.56%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	12.03%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	11.28%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	6.02%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.51%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.50%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified	1.50%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.75%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.75%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.75%
Bioreactor	Engineered → Solid Waste → Grass → Composting → Bioreactor	0.75%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	18.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	12.78%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	11.28%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	11.28%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	9.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.02%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	5.26%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	4.51%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	4.51%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.01%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.01%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.26%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.50%
Agave	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified → Agave	1.50%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.75%
Terrestrial	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial	0.75%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.75%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.75%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.75%
Sugar Cane Bagasse Incubating Bioreactor	Engineered → Solid Waste → Grass → Composting → Bioreactor → Sugar Cane Bagasse Incubating Bioreactor	0.75%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090014	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
2124908045	Soil microbial communities from Great Prairies - Kansas assembly 1 01_01_2011	Environmental	Open in IMG/M
3300000156	Sugar cane bagasse incubating bioreactor microbial communities from Sao Carlos, Brazil, that are aerobic and semianaerobic	Engineered	Open in IMG/M
3300000443	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.2B clc assemly	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300002906	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm	Environmental	Open in IMG/M
3300002911	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005562	Agave microbial communities from Guanajuato, Mexico - As.Ma.e	Host-Associated	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010122	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_2_4_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300010323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaG	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300012022	Terrestrial microbial communites from a soil warming plot in Okalahoma, USA - C6	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012915	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S103-311B-2	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300015356	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015357	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_0_1 metaG	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300017657	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09212015	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026295	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026317	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121 (SPAdes)	Environmental	Open in IMG/M
3300026326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127 (SPAdes)	Environmental	Open in IMG/M
3300026343	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144 (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027643	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3 (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028791	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_144	Environmental	Open in IMG/M
3300028881	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300032159	Agave microbial communities from Guanajuato, Mexico - As.Ma.e (v2)	Host-Associated	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPIPI_01004320	2088090014	Soil	MKTGPFLFEAKSGKSRYTRLFACISEEEDGYTVQVGLSNETKPDNNAWGEEIVDSFETASELVAALAGEFSIAQACIEIEIRMHNHKHGTRH
KansclcFeb2_10097600	2124908045	Soil	MKASPFLLEASGESRYTRLFACISEEEGGYTVQVRLSSERNPEDSAWGEEIVDSFETASGLVTALAGEFSIAQACIKLEIRMHDHKQGTRH
NODE_05136332	3300000156	Sugar Cane Bagasse Incubating Bioreactor	MTASPFLLESKSGKSRYTRLFACISEEEDGYTVQVRLCNERKPENSAWGEDTVDSFETASELVAALAGEFSIAQACIKIEIRMHNHKHXXXXCATRGSRKTALGAKK*
F12B_101344421	3300000443	Soil	VAQKASPFLFEAKSGKPRFTRLFACISEEEDGYMVQVSLSNERKPGNSAWGEEIVDSFETASELVAALAGEFSIARECIEIEIRMHNHKHGTRH
F12B_101344431	3300000443	Soil	VKASPFLLEASRESRYTRLFACISEEEGGYTVQVRLSSEMNPEDSAWGEEIVDSFETASGLVAALAGEFSIAQACIKLEIRMHDHKQGTRH*
JGI10216J12902_1142379581	3300000956	Soil	MKTTPLFFEAKSGRSPYTKLFACISEEEDGYMVEVRLFDERKPENSAWGEEIADSFETASELVAALAGEFSIGQGGIEIEIRMHNHKHGTRH*
JGI25614J43888_100094465	3300002906	Grasslands Soil	MKASPFLVESPSESRYTRLFACISEEEDGYTVQVRLSNELNPEDSAWGEEIVDSFETASGLVAALAGEFSIAQACIKIEIRMHNHKHGTRH*
JGI25390J43892_101748361	3300002911	Grasslands Soil	MKASPFLFESKSGASRYTRLFACISEEEGGYTVQVRLSNEMNPEDSAWGEEIVDSFETASGLVTALAGEFSIAQACIKLEIRMHDHKQGTRH*
Ga0066674_100858103	3300005166	Soil	VAQKTGPFRFETPAGKSRYTKLFACISEEEDGYVVQVRLSNEKKPENSAWGEEMVDSFERASELVAALAGEFSIAQAGIEIEIRMHNHKHGTRH*
Ga0066672_104568931	3300005167	Soil	MTVAQKTGPFRFETPAGKSRYTKLFACISEEEDGYVVQVRLSNEKKPENSAWGEEMVDSFERASELVAALAGEFSIAQAGIEIEIRMHNHKHGTRH*
Ga0066676_101704044	3300005186	Soil	TVAQKTGPFRFETPAGKSRYTKLFACISEEEDGYVVQVRLSNEKKPENSAWGEEMVDSFERASELVAALAGEFSIAQAGIEIEIRMHNHKHGTRH*
Ga0066388_1001114254	3300005332	Tropical Forest Soil	MKSGPFRFESASGKARYTKLFASISEEEDGYMVQIRLSNEAKPESGAWGEEIVDSFETASELVAALAGEFSIAQSCIEIEIRMHDHKHGTRH*
Ga0066388_1008455853	3300005332	Tropical Forest Soil	MTVAQKTGPFRFETPAGKSHYTRLFACISEEEDGYTVQVRLSNEKRPEDIAWDEEIVDSFETASELVSALAGEFSIAQAGMVIKIRMHGHKRAPDTDPPCGDEGNSAA*
Ga0070668_1005774882	3300005347	Switchgrass Rhizosphere	MKTGPFLFEAKSGKSRYTRLFACISEEEDGYTVQVGLSNETKPDNNAWGEEIVDSFETASELVAALAGEFSIAQACIEIEIRMHNHKHGTRH*
Ga0070709_100126703	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MKTGPFLFEAKSGKSRYTRLFACISEEEDGYTVQVALSNEMKPDNNAWGEELVDSFETASELVAALAGEFSIAQACIEIEIRMHNHKHGTRH*
Ga0070714_1009840111	3300005435	Agricultural Soil	MKAGPFLFEAKSGKSRYTRLFACISEEEDGYTVQVALSNETRPDNNAWGEEIVDSFETASELVAALAGEFSIAQPCIEIEIRMHNHKHGTRH*
Ga0070713_1000783881	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	GPFLFEAKSGKSRYTRLFACISEEEDGYTVQVALSNEMKPDNNAWGEELVDSFETASELVAALAGEFSIAQACIEIEIRMHSHKHGTRH*
Ga0070713_1001579264	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	AGPFLFEAKSGKSRYTRLFACISEEEDGYTVQVALSNETRPDNNAWGEEIVDSFETASELVAALAGEFSIAQPCIEIEIRMHNHKHGTRH*
Ga0070710_100572772	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MKTGPFLFEAKSGKSRYTRLFACISEEEDGYTVQVALSNEMKPDNNAWGEELVDSFETASELVAALAGEFSIAQACIEIEIRMHSHKHGTRH*
Ga0070711_1000847891	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	FLFEAKSGKSRYTRLFACISEEEDGYTVQVGLSNETKPDNNAWGEEIVDSFETASELVAALAGEFSIAQACIEIEIRMHNHKHGTRH*
Ga0070708_1004549132	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MKASPFLLESSSESRYTRLFACISEEEDGYTVQVRLSNELNPEDSAWGEEIVDSFETASGLVAALAGEFSIAQACIKIEIRMHNHKHGTRH*
Ga0066682_108873181	3300005450	Soil	GPPRRHYRITKLQGMTVAQKTGPFRFETPAGKSRYTKLFACISEEEDGYVVQVRLSNEKKPENSAWGEEMVDSFERASELVAALAGEFSIAQAGIEIEIRMHNHKHGTRH*
Ga0070707_1015824051	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MRASPFLLESSSESRYTRLFACISEEEDGYTVQVRLSNELNPEDSAWGEEIVDSFETASGLVAALAGEFSIAQACIKIEIRMHNHKHGTRH*
Ga0070697_1001658171	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MKASPFLLESSSESRYTRLFACISEEEDGYMVQIRLSNEAKPENGAWGEEIVDSFETASELVAALAGEFSIAQSSIQIEIRMHNNKHGTRH*
Ga0066692_103415772	3300005555	Soil	VAQKTGPFRFETPAGKSRYTKLFACISEEEDGYVVQVRLSNEKKPENSAWGEEIVDSFESASELVAALAGEFSIAQAGIEIEIRMHNHKHGTRH*
Ga0066699_101343291	3300005561	Soil	VAQKTGPFRFETPAGKSRYTKLFACISEEEDGYVVQVRLSNEKKPENSAWGEEMVDSFERASELVAALAGEFSIAQAGIEIEIRMH
Ga0058697_104320842	3300005562	Agave	ESSRGSRYTRLFACISEEESGYTVQVRLSSEMNPEDSAWGEEIVDSFDTASGLVAALAGEFSIAQACIKLEIRMHDHKQGTRP*
Ga0066705_104008632	3300005569	Soil	VAQKTGPFRFETPAGKSRYTKLSACISEEEDGYVVQVRLSNEKKPENSAWGEEMVDSFERASELVAALAGEFSIAQAGIEIEIRMHNHKHGTRH*
Ga0066691_102098462	3300005586	Soil	VAQKTGPFRFETPAGKSRYTKLFACISEEEDGYVVQFRLSNEKKPEKSAWGEEIVDSFETASELVAGLAGEFSIAQAGIEIEIRMHNHKHGTRH*
Ga0066905_1001840912	3300005713	Tropical Forest Soil	MKADPFLFESTSGKARYTKLFACISEEEDGYTVQIRLSNEAKPESGAWGEEIVDSFETASELVAALAGEFSIAQASIKIEIRMHDHKHGTRH*
Ga0066905_1008087322	3300005713	Tropical Forest Soil	MKSDRFQFEPTSGKARYTKLFACISEEEDGYMVQIRLSNEAKPESGAWGEEIVDSFETASELVAALAGEFSIAQSSIEIEIRMHNHKHGTRH*
Ga0066903_1019174313	3300005764	Tropical Forest Soil	MTVAQKTGPFRFDSPAGKSRYTRLYACISEEEDGYMVQVRLSNEKKPEDNAWGEEIVDSFEAASELVSALAGEFSIAQAGIEIEIRMHNHKHGTRH*
Ga0066903_1071081142	3300005764	Tropical Forest Soil	VVQKTGPFRFETSADNSRYTKLFACISEEEDGYMVQIRLSNEAKPESGAWGEEIVDSFETASELVAALAGEFSIAQSSIEIEIRMHNHKHGTRH*
Ga0070717_101454285	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	GPFLFEAKSGKSRYTRLFACISEEEDGYTVQVALSNETRPDNNAWGEEIVDSFETASELVAALAGEFSIAQPCIEIEIRMHNHKHGTRH*
Ga0066651_106431971	3300006031	Soil	MTVAQKTGPFRFETPAGKSRYTKLFACISEEEDGYVVQVRLSNEKKPENSAWGEEMVDSFERASELVAALAGEFSIAQAGIEIEIRMHNHKHG
Ga0075417_101816622	3300006049	Populus Rhizosphere	VLQKTGPFRFETSVDKSRYTKLFACISEEEDGYMVQVRLSDEKKPENNAWGEEIVDSFETASELVAALAGEFSIAQAGIEIEIRMHNHTHGTRH*
Ga0075417_102931721	3300006049	Populus Rhizosphere	MKASPFLLESSRESRYTRLFACISEEEGGYTVQVRLSSEMNPEDSAWGEEIVDSFETASGLVAALAGEFSIAQACIKLEIRMHDHKQGTRH*
Ga0075028_1003003421	3300006050	Watersheds	MKASPFLLESSSESRYTRLFACISEEEDGYTVQVRLSNELNPEDSAWGEEIVDSFETASGLVAALAGEFSIAQACIKIEIRMHNHKH
Ga0070715_103437891	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MKTGPFLFEAKSGKSRYTRLFACISEEEDGYTVQVALSNETRPDNNAWGEEIVDSFETASELVAALAGEFSIAQPCIEIEIRMHNHKHGTRH*
Ga0070716_1012727912	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	VTQKASPFLFEAKSGKSRYTKLFACISEEEDGYTVEVRLFDETKPESSAWGEELVDSFETASELVAALAGEFSIGQAGIEIEIRMHNHKHGTRH*
Ga0066653_101827651	3300006791	Soil	KERLCRMKASPFLFESKSGASRYTRLFACISEEEGGYTVQVRLSNEMNPEDSAWGEEIVDSFETASGLVTALAGEFSIAQACIKLEIRMHDHKQGTRH*
Ga0066658_102084572	3300006794	Soil	VAQKTGPFRFETPAGKSRYTKLFACISEEEDGYVVQVRLSNEKKPENSAWGEEMVDSFETASELVAGLAGEFSIAQAGIEIEIRMHNHKHGTRH*
Ga0075421_10001741411	3300006845	Populus Rhizosphere	VLQKTGPFRFETSVDKSRYTKLFACISEEEDGYMVQVRLSDEKKPENNAWGEEIVDSFETASELVAALASEFSIAQAGIEIEIRMHNHTHGTRH*
Ga0075425_1013370852	3300006854	Populus Rhizosphere	MKAGPFLFEAKSGKSRYTRLFACISEEEDGYTVQVALSNEMKPDNNAWGEELVDSFETASELVAALAGEFSIAQACIEIEIRMHSHKHGTRH*
Ga0075425_1015826811	3300006854	Populus Rhizosphere	MKSGPFRFESALGKARYTKLFACISEEEDGYMVQIRLSNEAKPENGAWGEEIVDSFETASELVAALAGEFSIAQSSIEIEIRMHNHKHGTRH*
Ga0075434_1002821132	3300006871	Populus Rhizosphere	MKTGPFLFEAKSGKSRYTRLFACISEEEDGYTVQVALSNEMKPDNSAWGEEIVDSFETASELVAALAGEFSIAQACIEIEIRMHNHKHGTRH*
Ga0075434_1008364082	3300006871	Populus Rhizosphere	MKSGPFRFESASGKARYTKLFACISEEEDGYMVQIRLSNEAKPENGAWGEEIVDSFETASELVAALAGEFSIAQSSIEIEIRMHNHKHGTRH*
Ga0066710_1016749721	3300009012	Grasslands Soil	RITKLQGMTVAQKTGPFRFETPAGKSRYTKLFACISEEEDGYVVQVRLSNEKKPENSAWGEEMVDSFERASELVAALAGEFSIAQAGIEIEIRMHNHKHGTRH
Ga0066710_1025183032	3300009012	Grasslands Soil	VAQKTGPFRFETPAGKSRYTKLSACISEEEDGYVVQFRLSNEKKPEKSAWGEEIVDSFETASELVAGLAGEFSIAQAGIEIEIRMHNHKHGTRH
Ga0075418_100812962	3300009100	Populus Rhizosphere	VTVLQKTGPFRFETSVDKSRYTKLFACISEEEDGYMVQVRLSDEKKPENNAWGEEIVDSFETASELVAALASEFSIAQAGIEIEIRMHNHIHGTRH*
Ga0066709_10000117811	3300009137	Grasslands Soil	LARCFWARFDETCRNGGVFTSQSCKERLWRMKASPFLFESKSGASRYTRLFACISEEEGGYTVQVRLSNEMNPEDSAWGEEIVDSFETASGLVTALAGEFSIAQACIKLEIRMHDHKQGTRH*
Ga0066709_1020997882	3300009137	Grasslands Soil	LIRDGPPRRHYRITKLQGITVAQKTGPFRFETPAGKSRYTKLSACISEEEDGYVVQFRLSNEKKPEKSAWGEEIVDSFETASELVAGLAGEFSIAQAGIEIEIRMHNHKHGTRH*
Ga0066709_1027205171	3300009137	Grasslands Soil	RITKLQGMTVAQKTGPFRFETPAGKSRYTKLFACISEEEDGYVVQVRLSNEKKPENSAWGEEMVDSFERASELVAALAGEFSIAQAGIEIEIRMHNHKHGTRH*
Ga0099792_112072171	3300009143	Vadose Zone Soil	QKASPFLFEAKSGKSRYTKLFACISEEEDGYTVEVRLFDETKPESSAWGEELVDSFETASELVAALAGEFSIGQAGIEIEIRMHNHKHGTRH*
Ga0114129_104260173	3300009147	Populus Rhizosphere	MTASPFLFESKSGKSRYTRLFACISEEEDGYTVQVRLSNERNPEDSAWGEEIVDSFETASELVATLAGEFSIAQTCIQIEIRMHNHKHGTRH*
Ga0114129_105450392	3300009147	Populus Rhizosphere	VTVLQKTGPFRFETSVDKSRYTKLFACISEEEDGYMVQVRLSDEKKPENNAWGEEIVDSFETASELVAALASEFSIAQAGIEIEIRMHNHTHGTRH*
Ga0114129_113564442	3300009147	Populus Rhizosphere	GPFLFEAKSGKSRYTRLFACISEEEDGYTVQVALSNEMKPDNSAWGEEIVDSFETASELVAALAGEFSIAQACIEIEIRMHNHKHGTRH*
Ga0126384_124545941	3300010046	Tropical Forest Soil	MTVAQKTGPFRFESPAGKSRYTRLFACISEEEDGYTVQVRLSNEKRPEDNAWGEEIVDSFETASELVAALAGEFSIAQA
Ga0126382_108813221	3300010047	Tropical Forest Soil	MTVAHKTGLFRFETPAGRPHYTKLFACISEEEDGYMVQIRLSNEAKPESGAWGEEIVDSFETASELVAALAGEFSIAQSCIEIEIRMHDHKHGTRH*
Ga0127488_10987191	3300010122	Grasslands Soil	MKASPFLFESKSGASRYTRLFACISEEEDGYVVQVRLSNEKKPENSAWGEEMVDSFERASELVAALAGEFSIAQAGIEIEIRMHNHKHGTRH*
Ga0134082_100096077	3300010303	Grasslands Soil	LIRDGPPRRHYRITKLQGITVAQKTGPFRFETPAGKSRYTKLFACISEEEDGYVVQVRLSNEKKPENSAWGEEMVDSFERASELVAALAGEFSIAQAGIEIEIRMHNHKHGTRH*
Ga0134086_101828991	3300010323	Grasslands Soil	QGMTVAQKTGPFRFETPAGKSRYTKLFACISEEEDGYVVQVRLSNEKKPENSAWGEEMVDSFERASELVAALAGEFSIAQAGIEIEIRMHNHKHGTRH*
Ga0134064_100524083	3300010325	Grasslands Soil	MTVAQKTGPFRFETPAGKSRYTKLFACISEEEDGYVVQVRLSNEKKPENSAWGEEMVDSFERASELVAALAGEFSIAQAGIEIEIRMHN
Ga0126376_132327201	3300010359	Tropical Forest Soil	MKSGPFRFESASGKARYTKLFASISEEEDGYMVQIRLSNEAKPESGAWGEEIVDSFETASELVAALAGEFSIAQSSIEIEIR
Ga0126372_107599534	3300010360	Tropical Forest Soil	ETPAGKSHYTRLFACISEEEDGYTVQVRLSNEKRPEDIAWDEEIVDSFETASELVSALAGEFSIAQAGMVIKIRMHGHKRAPDTDPPCGDEGNSAA*
Ga0134125_100686334	3300010371	Terrestrial Soil	MKTGPFLFEAKSGKSRYTRLFACISEEEDGYTVQVGLSNETKPDNNAWGEEIVDSFETASELVAALAGEFSIAQPCIEIEIRMHNHKHGTRH*
Ga0134126_119994452	3300010396	Terrestrial Soil	GPFLFEAKSGKSRYTRLFACISEEEDGYTVQVALSNETRPDNNAWGEEIVDSFETASELVAALAGEFSIAQACIEIEIRMHNHKHGTRH*
Ga0134123_102683012	3300010403	Terrestrial Soil	MKTGPFLFEAKSGKSRYTRLFACISEEEDGYTVQVGLSNGTKPDNNAWGEEIVDSFETASELVAALAGEFSIAQACIEIEIRMHNHKHGTRH*
Ga0120191_100017562	3300012022	Terrestrial	MKASPFLLEPSRESRYTRLFACISEEEGGYTVQVRLSSEMNPEDSAWGEEIVDSFETASGLVAALAGEFSIAQACIKLEIRMHDHKQGTRH*
Ga0137364_103263932	3300012198	Vadose Zone Soil	MWPRPDTRLFACISEEEDCYTVQVRLSNETSRKTALGAKKFETASELVAALAGEFSIVQACIKIEIRMHNHKHGTRH*
Ga0137365_103923062	3300012201	Vadose Zone Soil	MTVAQKASPFLFEAKSGKPRFTRLFACISEEEDGYMVQVSLSNERKPGNSAWGEEIVDSFETASELVAALAGEFSIARECIEIEIRMHNHKHGTRH*
Ga0137399_115521601	3300012203	Vadose Zone Soil	MKASPFLVESPSESRYTRLFACISEEEDGYTVQVRLSNELNPEDSAWGEEIVDSFETASGLVAALAGEFSIAQACITIEIRMHNHKHGTRH*
Ga0137374_1000863415	3300012204	Vadose Zone Soil	MKASPFLFESKSGASRYTRLFACISEEEGGYTVQVRLSNEMHPEDSAWGEEIVDSFETASGLVTALAGEFSIAQACIKLEIRMHDHKQGTRH*
Ga0137362_100336367	3300012205	Vadose Zone Soil	ESPSESRYTRLFACISEEEDGYTVQVRLSNELNPEDSAWGEEIVDSFETASGLVAALAGEFSIAQACIKIEIRMHNHKHGTRH*
Ga0137380_108077072	3300012206	Vadose Zone Soil	VAQKTGPFRFETPAGKSRYTKLSACISEEEDGYFVQFRVTNEKKPEKSAWGEEIVDSFETASELVAGLAGEFSIAQAGIEIEIRMHNHKHGTRH*
Ga0137380_111270452	3300012206	Vadose Zone Soil	MTVAQKTGPFRFETPAGKSRYTKLFACISEEEDGYVVQVRLSNEKKPENSAWGEEMVDSFERASELVAALAGEFSIAQAGIEIEI
Ga0137376_107698362	3300012208	Vadose Zone Soil	MTVAHKTGPFRFETPAGRSHYTRLFACISEEEDGYMVQVRLSNEKRPENNAWGEEIVDSFETASELVAALAGAFSIAQAGIEMEIRMHNHKEGTRH*
Ga0137379_106078022	3300012209	Vadose Zone Soil	VAQKTGPFRFETPAGKSRYTKLSACISEEEDGYVVQFRLSNEKKPEKSAWGEEIVDSFETASELVAGLAGEFSIAQAGIEIEIRMHNHKHGTRH*
Ga0137379_110357312	3300012209	Vadose Zone Soil	MWPRPDTRLFACISEEEDCYTVQVRLSNETKPEDSAWGEEIVDSFETASELVAALAGEFSIVQACIKIEIRMHNHKHGTRH*
Ga0137377_102545113	3300012211	Vadose Zone Soil	MRDASQRRRFHVTKSQGMTVAHDLESPSESRYTRLFACISEEEDGYTVQVRLSNELNPEDSAWGEEIVDSFETASGLVAALAGEFSIAQACIKIEIRMHNHKHGTRH*
Ga0137377_110057422	3300012211	Vadose Zone Soil	QKTGPFRFETPAGKSRYTKLFACISEEEDGYVVQVRLSNEKKPENSAWGEEMVDSFERASELVAALAGEFSIAQAGIEIEIRMHNHKHGTRH*
Ga0137387_104052692	3300012349	Vadose Zone Soil	MTVAQKTGPFRFETPAGKSRYTKLFACISEEEDGYVVQVRLSNEKKPENSAWGEEIVDSFETASELVAGLAGEFSIAQAGIEIEIRMHNHKHGTRH*
Ga0137372_102915171	3300012350	Vadose Zone Soil	MTVAQKASPFLFEAKSGKPRFTRLFACISEEEDGYMVQVSLSNERKPGNSAWGEEIVDSFETASELVAALAGEFSIVQACIKIEIRMHNHKHGTRH*
Ga0137369_100576033	3300012355	Vadose Zone Soil	MKASPFLLEASGESRYTRLFACISEEEGGYTVQVRLSSEMNPEDSAWGEEIVDSFETASGLVAALAGEFSIAQACIKLEIRMHDHKQGTRH*
Ga0137369_103138041	3300012355	Vadose Zone Soil	MWPRPDTRLFACISEEEDCYTVQVRLSNETSRKTALGAKKFETDSELVAALAGEFSIVQACIKIEIRMHNHKHGTRH*
Ga0137368_103262642	3300012358	Vadose Zone Soil	MTASPFLFESKSGKSRYTRLFACISEEEDCYTVQVRLSNETKPEDSAWGEEIVDSFETASELVAALAGEFSIVQACIKIEIRMHNHKHGTRH*
Ga0137385_107414323	3300012359	Vadose Zone Soil	QRRRSRITKLQGMSVAQKTGPFRFETPAGKSRYTKLSACISEEEDGYVVQFRLSNEKKPEKSAWGEEIVDSFETASELVAGLAGEFSIAQAGIEIEIRMHNHKHGTRH*
Ga0137358_103820832	3300012582	Vadose Zone Soil	MTVTQKASPFLFEAKSGKSRYTKLFACISEEEDGYTVEVRLFDETKPESSAWGEELVDSFETASELVAALAGEFSIGQAGIEIEIRMHNHKHGTRH*
Ga0157302_105798061	3300012915	Soil	MKAGPFLFEANSGKSRYTRLFACISEEEDGYTVEVRLFDETKPESSAWGEELVDSFETASELVAALAGEFSIGQAGIEIEIRMHNHKHGT
Ga0137359_116234501	3300012923	Vadose Zone Soil	MTVAHKTGPFRFETPAGRSHYTRLFACISEEEDGYMVQVRLSNEKRPENNAWGEEIVDSFETASELVAALAGAFSIAQAGIEMEIRMHNHKQGTRH*
Ga0164300_100133023	3300012951	Soil	MKAGPFLFEAKSGKSRYTRLFACISEEEDGYTVQVGLSNETKPDNNAWGEEIVDSFETASELVAALAGEFSIAQPCIEIEIRMHNHKHGTRH*
Ga0164303_100165772	3300012957	Soil	MKAGPFLFEAKSGKSRYTRLFACISEEEDGYTVQVALSNETRPDNNAWGEEIVDSFETASELVAALAGEFSIAQACIEIEIRMHNHKHGTRH*
Ga0164299_100065281	3300012958	Soil	MKTGPFLFEAKSGKSRYTRLFACISEEEDGYTVQVALSNETRPDNNAWGEEIVDSFETASELVAALAGEFSIAQACIEIEIRMHNHKHGTRH*
Ga0126369_126389062	3300012971	Tropical Forest Soil	GPFRFETPAGKSHYTRLFACISEEEDGYTVQVRLSNEKRPEDIAWDEEIVDSFETASELVSALAGEFSIAQAGMVIKIRMHGHKRAPDTDPPCGDEGNSAA*
Ga0164307_109659451	3300012987	Soil	MKTGPFLFEAKSGKSRYTRLFACISEEEDGYTVQVALSNETKPDNNAWGEEIVDSFETASELVAALAGEFSIAQTCIEIEIRMHNHKHGTRH*
Ga0164305_100523555	3300012989	Soil	MKAGPFLFEAKSGKSRYTRLFACISEEEDGYTVQVGLSNETKPDNNAWGEEIVDSFETASELVAALAGEFSIAQACIEIEIRMHNHKHGTRH*
Ga0134073_100165614	3300015356	Grasslands Soil	MSVAQKTGPFRFETPAGKSRYTKLFACISEEEDGYVVQVRLSNEKKPENSAWGEEMVDSFERASELVAALAGEFSIAQAGIEIEIRMHNHKHGTRH*
Ga0134072_100542381	3300015357	Grasslands Soil	MTVAQKTGPFRFETPAGKSRYTKLFACISEEEDGYVVQVRLSNEKKPENSAWGEEMVDSFERASELVAALAGEFSIAQAGIEIEIRMHNHKHGT
Ga0132258_134004363	3300015371	Arabidopsis Rhizosphere	MTVAQKTGPFRFETSAEKSGYTKLFACISEEEDGYMVQVRLSNEKKPENNAWGEETVDSFETASELVSALAGEFSIAQAGIEIEIRMHDHKHGTRH*
Ga0134074_13733262	3300017657	Grasslands Soil	VAQKTGPFRFETPAGKSRYTKLFACISEEEDGYVVQVRLSNEKKPENSAWGEEMVDSFERASELVAALAGEFSIAQA
Ga0066655_100640713	3300018431	Grasslands Soil	MKASPFLFESKSGASRYTRLFACISEEEGGYTVQVRLSNEMNPEDSAWGEEIVDSFETASGLVTALAGEFSIAQACIKLEIRMHDHKQGTRH
Ga0066655_101092513	3300018431	Grasslands Soil	VAQKTGPFRFETPAGKSRYTKLFACISEEEDGYVVQVRLSNEKKPENSAWGEEMVDSFERASELVAALAGEFSIAQAGIEIEIRMHNHKHGTRH
Ga0066667_104845002	3300018433	Grasslands Soil	YRITKLQGMTVAQKTGPFRFETPAGKSRYTKLFACISEEEDGYVVQVRLSNEKKPENSAWGEEMVDSFERASELVAALAGEFSIAQAGIEIEIRMHNHKHGTRH
Ga0066667_105993491	3300018433	Grasslands Soil	ETPAGKSRYTKLSACISEEEDGYVVQFRLSNEKKPEKSAWGEEIVDSFETASELVAGLAGEFSIAQAGIEIEIRMHNHKHGTRH
Ga0066669_110388472	3300018482	Grasslands Soil	WRMKASPFLFESKSGASRYTRLFACISEEEGGYTVQVRLSNEMNPEDSAWGEEIVDSFETASGLVTALAGEFSIAQAGIEIEIRMHNHKHGTRH
Ga0179592_102403461	3300020199	Vadose Zone Soil	MKASPFLVESPSESRYTRLFACISEEEDGYTVQVRLSNELNPEDSAWGEEIVDSFETASGLVAALAGEFSIAQACIKIEIRMHNHKHGTRH
Ga0210407_101050643	3300020579	Soil	MKAGPFLFEAKSGKSRYTRLFACISEEEDGYTVQVGLSNETKPDNNAWGEEIVDSFETASELVAALAGEFSIAQACIEIEIRMHNHKHGTRH
Ga0210407_106799231	3300020579	Soil	MTVTLKASPFLFEGKSGKSRYTKLFACISEEEDGYTVEVRLFDETKPENSAWGEELVDSFETASELVAALAGEFSIGQA
Ga0210403_101009893	3300020580	Soil	MTVTLKASPFLFEGKSGKSRYTKLFACISEEEDGYTVEVRLFDETKPENSAWGEELVDSFETASELVAALAGEFSIGQAGIEIEIRMHNHKHGTRH
Ga0210406_107094921	3300021168	Soil	MTASPFLFESKSGKSRYTRLFACISEEEDCYTVQVRLSNETKPEDSAWGEEIVDSFETASEFVAALAGEFSIAQACIQIEIRMHNHKHGTRH
Ga0126371_105929554	3300021560	Tropical Forest Soil	MTVAQKTGPFRFETPAGKSHYTRLFACISEEEDGYTVQVRLSNEKRPEDIAWDEEIVDSFETASELVSALAGEFSIAQAGMVIKIRMHGHKRAPDTDPPCGDEGNSAA
Ga0207685_100774931	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	KTGPFLFEAKSGKSRYTRLFACISEEEDGYTVQVGLSNETKPDNNAWGEEIVDSFETASELVAALAGEFSIAQPCIEIEIRMHNHKHGTRH
Ga0207693_101460512	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MKAGPFLFEAKSGKSRYTRLFACISEEEDGYTVQVALSNETRPDNNAWGEEIVDSFETASELVAALAGEFSIAQPCIEIEIRMHNHKHGTRH
Ga0207663_109755701	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MKTGPFLFEAKSGKSRYTRLFACISEEEDGYTVQVALSNETRPDNNAWGEEIVDSFETASELVAALAGEFSIAQACIEIEIRM
Ga0207665_110908231	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	VTQKASPFLFEAKSGKSRYTKLFACISEEEDGYTVEVRLFDETKPESSAWGEELVDSFETASELVAALAGEFSIGQAGIEIEIRMHNHKHGTRH
Ga0209234_12921881	3300026295	Grasslands Soil	MKTGPFLFEAKSGKSRYTRLFACISEEEDGYMVQVRLSDEMNPENSAWGEEIVDSFETASGLVTALAGEFSIAQACIKLEIRMHDHKQGTRH
Ga0209154_10335951	3300026317	Soil	PRRHYRITKLQGMTVAQKTGPFRFETPAGKSRYTKLFACISEEEDGYVVQVRLSNEKKPENSAWGEEMVDSFERASELVAALAGEFSIAQAGIEIEIRMHNHKHGTRH
Ga0209801_10308406	3300026326	Soil	MTVAQKTGPFRFETPAGKSRYTKLFACISEEEDGYVVQVRLSNEKKPENSAWGEEMVDSFERASELVAALAGEFSIAQAGIEIEIRMHNHKHGTRH
Ga0209159_10432131	3300026343	Soil	RYTKLFACISEEEDGYVVQVRLSNEKKPENSAWGEEMVDSFERASELVAALAGEFSIAQAGIEIEIRMHNHKHGTRH
Ga0179587_106331802	3300026557	Vadose Zone Soil	KLQGMTVTQKASPFLFEAKSGKSRYTKLFACISEEEDGYTVEVRLFDETKPENSAWGEELVDSFETASELVAALAGEFSIGQAGIEIEIRMHNHKHGTRH
Ga0209076_12227982	3300027643	Vadose Zone Soil	MKASPFLVESPSESRYTRLFACISEEEDGYTVQVRLSNELNPEDSAWGEEIVDSFETASGLVAALAGEFSIAQACIKIEIRMHNHKHGTR
Ga0209814_100454381	3300027873	Populus Rhizosphere	MKASPFLLESSRESRYTRLFACISEEEGGYTVQVRLSSEMNPEDSAWGEEIVDSFETASGLVAALAGEFSIAQACIKL
Ga0209814_100591221	3300027873	Populus Rhizosphere	VLQKTGPFRFETSVDKSRYTKLFACISEEEDGYMVQVRLSDEKKPENNAWGEEIVDSFETASELVAALASEFSIAQAGIEIEIRMHNHIHGTRH
Ga0209488_110920131	3300027903	Vadose Zone Soil	TQKASPFLFEAKSGKSRYTKLFACISEEEDGYTVEVRLFDETKPESSAWGEELVDSFETASELVAALAGEFSIGQAGIEIEIRMHNHKHGTRH
Ga0209382_100168404	3300027909	Populus Rhizosphere	MKASPFLLESSRESRYTRLFACISEEEGGYTVQVRLSSEMNPEDSAWGEEIVDSFETASGLVAALAGEFSIAQACIKLEIRMHDHKQGTRH
Ga0209382_101852431	3300027909	Populus Rhizosphere	VLQKTGPFRFETSVDKSRYTKLFACISEEEDGYMVQVRLSDEKKPENNAWGEEIVDSFETASELVAALASEFSIAQAGIEIEIRMHNHTHGTRH
Ga0307290_101237652	3300028791	Soil	MKAGPFLFEAKSGKSRYTRLFACISEEDDGYTVQVALSNETKPDNSAWGEEIVDSFETASELVAALAGEFSIAQACIEIEIRMHNHKHGTRH
Ga0307277_100044751	3300028881	Soil	MKAGPFLFEAKSGKSRYTRLFACISEEEDGYTVQVALSNETKPDNSAWGEEIVDSFETASELVAALAGEFSIAQACIEIEIRMHNHKHGTRH
Ga0307469_100332021	3300031720	Hardwood Forest Soil	ASWRMKTGPFLFEAKSGKSRYTRLFACISEEEDGYTVQVGLSNETKPDNNAWGEEIVDSFETASELVAALAGEFSIAQACIEIEIRMHNHKHGTRH
Ga0307468_1006020992	3300031740	Hardwood Forest Soil	MKTGPFLFEAKSGKSRYTRLFACISEEEDGYTVQVGLSNETKPDNNAWGEEIVDSFETASELVAALAGEFSITQACIEIEIRMHNHKHGTRH
Ga0268251_106154542	3300032159	Agave	SRYTRLFACISEEESGYTVQVRLSSEMNPEDSAWGEEIVDSFDTASGLVAALAGEFSIAQACIKLEIRMHDHKQGTRP
Ga0307471_1005852521	3300032180	Hardwood Forest Soil	MKASPFLLESSSESRYTRLFACISEEEDGYTVQVRLSNELNPEDSAWGEEIVDSFETASGLVAALAGEFSIAQACIKIEIRMHNHKHGTRH
Ga0307472_1004620902	3300032205	Hardwood Forest Soil	MKSGPFRFESASGKARYTKLFACISEEEDGYMVQIRLSNEAKPENGAWGEEIVDSFETASELVAALAGEFSIAQSSIEIEIRMHNHKHGTRH

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F060389

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences