NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F060323

Metagenome Family F060323

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F060323
Family Type Metagenome
Number of Sequences 133
Average Sequence Length 85 residues
Representative Sequence VEFYAALVLALTLAAIAGVLYFYAMFLEARTRQQKKYIAGLERANAELRGELAQTRALLDRELEHSRALWPELLDDAGDLSRN
Number of Associated Samples 97
Number of Associated Scaffolds 133

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 86.47 %
% of genes near scaffold ends (potentially truncated) 23.31 %
% of genes from short scaffolds (< 2000 bps) 75.19 %
Associated GOLD sequencing projects 90
AlphaFold2 3D model prediction Yes
3D model pTM-score0.53

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (93.985 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil
(13.534 % of family members)
Environment Ontology (ENVO) Unclassified
(30.827 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(48.872 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 71.17%    β-sheet: 0.00%    Coil/Unstructured: 28.83%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.53
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 133 Family Scaffolds
PF00722Glyco_hydro_16 12.03
PF01436NHL 5.26
PF13905Thioredoxin_8 3.01
PF00107ADH_zinc_N 2.26
PF16912Glu_dehyd_C 1.50
PF00903Glyoxalase 1.50
PF01713Smr 1.50
PF13517FG-GAP_3 1.50
PF01381HTH_3 1.50
PF02627CMD 0.75
PF0563523S_rRNA_IVP 0.75
PF13519VWA_2 0.75
PF12802MarR_2 0.75
PF027373HCDH_N 0.75
PF02384N6_Mtase 0.75
PF12399BCA_ABC_TP_C 0.75
PF00578AhpC-TSA 0.75
PF01189Methyltr_RsmB-F 0.75
PF03544TonB_C 0.75
PF13155Toprim_2 0.75
PF05762VWA_CoxE 0.75
PF01895PhoU 0.75
PF01872RibD_C 0.75
PF12950TaqI_C 0.75
PF08240ADH_N 0.75
PF00483NTP_transferase 0.75
PF01663Phosphodiest 0.75
PF01584CheW 0.75
PF14310Fn3-like 0.75

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 133 Family Scaffolds
COG2273Beta-glucanase, GH16 familyCarbohydrate transport and metabolism [G] 12.03
COG014416S rRNA C967 or C1407 C5-methylase, RsmB/RsmF familyTranslation, ribosomal structure and biogenesis [J] 0.75
COG0240Glycerol-3-phosphate dehydrogenaseEnergy production and conversion [C] 0.75
COG0262Dihydrofolate reductaseCoenzyme transport and metabolism [H] 0.75
COG0287Prephenate dehydrogenaseAmino acid transport and metabolism [E] 0.75
COG0599Uncharacterized conserved protein YurZ, alkylhydroperoxidase/carboxymuconolactone decarboxylase familyGeneral function prediction only [R] 0.75
COG0677UDP-N-acetyl-D-mannosaminuronate dehydrogenaseCell wall/membrane/envelope biogenesis [M] 0.75
COG0810Periplasmic protein TonB, links inner and outer membranesCell wall/membrane/envelope biogenesis [M] 0.75
COG1004UDP-glucose 6-dehydrogenaseCell wall/membrane/envelope biogenesis [M] 0.75
COG12503-hydroxyacyl-CoA dehydrogenaseLipid transport and metabolism [I] 0.75
COG1748Saccharopine dehydrogenase, NADP-dependentAmino acid transport and metabolism [E] 0.75
COG1985Pyrimidine reductase, riboflavin biosynthesisCoenzyme transport and metabolism [H] 0.75
COG20843-hydroxyisobutyrate dehydrogenase or related beta-hydroxyacid dehydrogenaseLipid transport and metabolism [I] 0.75
COG2128Alkylhydroperoxidase family enzyme, contains CxxC motifInorganic ion transport and metabolism [P] 0.75

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms96.99 %
UnclassifiedrootN/A3.01 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300002896|JGI24802J43972_1009190All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium719Open in IMG/M
3300002899|JGIcombinedJ43975_10080061All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Haloferacales → Haloferacaceae → Haloplanus → Haloplanus natans579Open in IMG/M
3300003203|JGI25406J46586_10255345All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Negativicutes → Selenomonadales → Selenomonadaceae → Anaerovibrio → unclassified Anaerovibrio → Anaerovibrio sp. RM50515Open in IMG/M
3300003321|soilH1_10138021All Organisms → Viruses → Predicted Viral4517Open in IMG/M
3300004016|Ga0058689_10025622All Organisms → cellular organisms → Bacteria → Acidobacteria989Open in IMG/M
3300005167|Ga0066672_10286529All Organisms → cellular organisms → Bacteria → Acidobacteria1068Open in IMG/M
3300005175|Ga0066673_10602452All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium639Open in IMG/M
3300005184|Ga0066671_10015848All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae3201Open in IMG/M
3300005184|Ga0066671_10195782All Organisms → cellular organisms → Bacteria1212Open in IMG/M
3300005184|Ga0066671_10315330All Organisms → cellular organisms → Bacteria → Acidobacteria985Open in IMG/M
3300005184|Ga0066671_10388485All Organisms → cellular organisms → Bacteria891Open in IMG/M
3300005184|Ga0066671_11050469All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium510Open in IMG/M
3300005354|Ga0070675_102038121All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium529Open in IMG/M
3300005466|Ga0070685_10595174All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium795Open in IMG/M
3300005554|Ga0066661_10068433All Organisms → cellular organisms → Bacteria2069Open in IMG/M
3300005560|Ga0066670_10139116All Organisms → cellular organisms → Bacteria → Acidobacteria1407Open in IMG/M
3300005561|Ga0066699_10915962All Organisms → cellular organisms → Bacteria611Open in IMG/M
3300005569|Ga0066705_10880131All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium532Open in IMG/M
3300005575|Ga0066702_10349251All Organisms → cellular organisms → Bacteria900Open in IMG/M
3300005587|Ga0066654_10455431All Organisms → cellular organisms → Bacteria700Open in IMG/M
3300005607|Ga0070740_10004585All Organisms → cellular organisms → Bacteria13468Open in IMG/M
3300005985|Ga0081539_10075572All Organisms → cellular organisms → Bacteria1789Open in IMG/M
3300006169|Ga0082029_1278967All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium648Open in IMG/M
3300006800|Ga0066660_10103039All Organisms → cellular organisms → Bacteria2025Open in IMG/M
3300006800|Ga0066660_10538244All Organisms → cellular organisms → Bacteria → Acidobacteria981Open in IMG/M
3300006876|Ga0079217_10065982All Organisms → cellular organisms → Bacteria1513Open in IMG/M
3300006876|Ga0079217_11641043All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium515Open in IMG/M
3300006918|Ga0079216_10287384All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium964Open in IMG/M
3300007004|Ga0079218_12144336All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium646Open in IMG/M
3300007790|Ga0105679_10554140All Organisms → Viruses → Predicted Viral3387Open in IMG/M
3300009098|Ga0105245_11269286All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium785Open in IMG/M
3300010036|Ga0126305_10074175All Organisms → cellular organisms → Bacteria1990Open in IMG/M
3300010036|Ga0126305_10125027All Organisms → cellular organisms → Bacteria1575Open in IMG/M
3300010037|Ga0126304_10069574All Organisms → cellular organisms → Bacteria → Acidobacteria2175Open in IMG/M
3300010038|Ga0126315_10811387All Organisms → cellular organisms → Bacteria617Open in IMG/M
3300010038|Ga0126315_10835752All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium609Open in IMG/M
3300010040|Ga0126308_10719568All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium687Open in IMG/M
3300010040|Ga0126308_10803447All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium652Open in IMG/M
3300010041|Ga0126312_10951899All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium627Open in IMG/M
3300010042|Ga0126314_10996114All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium622Open in IMG/M
3300010044|Ga0126310_10528447All Organisms → cellular organisms → Bacteria867Open in IMG/M
3300010045|Ga0126311_10000866All Organisms → cellular organisms → Bacteria14146Open in IMG/M
3300010045|Ga0126311_10295781All Organisms → cellular organisms → Bacteria1217Open in IMG/M
3300010045|Ga0126311_11255981All Organisms → cellular organisms → Bacteria614Open in IMG/M
3300010166|Ga0126306_10046276All Organisms → cellular organisms → Bacteria2999Open in IMG/M
3300010166|Ga0126306_10440382All Organisms → cellular organisms → Bacteria1024Open in IMG/M
3300010166|Ga0126306_10972505All Organisms → cellular organisms → Bacteria691Open in IMG/M
3300012469|Ga0150984_116463034All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium692Open in IMG/M
3300014487|Ga0182000_10057354All Organisms → cellular organisms → Bacteria1187Open in IMG/M
3300014487|Ga0182000_10218799All Organisms → cellular organisms → Bacteria742Open in IMG/M
3300014487|Ga0182000_10431421All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium593Open in IMG/M
3300014488|Ga0182001_10155278All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium786Open in IMG/M
3300014488|Ga0182001_10362758All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium615Open in IMG/M
3300014488|Ga0182001_10531670All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium549Open in IMG/M
3300015357|Ga0134072_10465988All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium513Open in IMG/M
3300018433|Ga0066667_10899626All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium761Open in IMG/M
3300018465|Ga0190269_10028522All Organisms → cellular organisms → Bacteria2527Open in IMG/M
3300018465|Ga0190269_10220578All Organisms → cellular organisms → Bacteria1044Open in IMG/M
3300018465|Ga0190269_10687491All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia712Open in IMG/M
3300018466|Ga0190268_10105374All Organisms → cellular organisms → Bacteria1323Open in IMG/M
3300018466|Ga0190268_10908725All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium686Open in IMG/M
3300018468|Ga0066662_10008116All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes5320Open in IMG/M
3300018468|Ga0066662_10165485All Organisms → cellular organisms → Bacteria1696Open in IMG/M
3300018482|Ga0066669_10686138All Organisms → cellular organisms → Bacteria902Open in IMG/M
3300018890|Ga0193595_1089335All Organisms → cellular organisms → Bacteria → Acidobacteria927Open in IMG/M
3300018890|Ga0193595_1116076All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium767Open in IMG/M
3300018920|Ga0190273_10929451All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium708Open in IMG/M
3300019377|Ga0190264_11943721All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium536Open in IMG/M
3300019767|Ga0190267_10204309All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium929Open in IMG/M
3300019767|Ga0190267_10881293All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium609Open in IMG/M
3300020146|Ga0196977_1017603All Organisms → Viruses → Predicted Viral1725Open in IMG/M
3300020202|Ga0196964_10497373All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium595Open in IMG/M
3300020215|Ga0196963_10180289All Organisms → cellular organisms → Bacteria909Open in IMG/M
3300020215|Ga0196963_10404556Not Available612Open in IMG/M
3300021067|Ga0196978_1000003All Organisms → cellular organisms → Bacteria565541Open in IMG/M
3300021184|Ga0196959_10140655All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium585Open in IMG/M
3300021265|Ga0213906_100067All Organisms → cellular organisms → Bacteria2608Open in IMG/M
3300021290|Ga0213902_100190All Organisms → cellular organisms → Bacteria1846Open in IMG/M
3300021362|Ga0213882_10364726All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium608Open in IMG/M
3300021362|Ga0213882_10508210All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium516Open in IMG/M
3300021374|Ga0213881_10187369All Organisms → cellular organisms → Bacteria912Open in IMG/M
3300021384|Ga0213876_10000011All Organisms → cellular organisms → Bacteria414473Open in IMG/M
3300021384|Ga0213876_10000205All Organisms → cellular organisms → Bacteria59996Open in IMG/M
3300021445|Ga0182009_10798118All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium516Open in IMG/M
3300026295|Ga0209234_1017094All Organisms → cellular organisms → Bacteria2749Open in IMG/M
3300026300|Ga0209027_1176076All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium704Open in IMG/M
3300026312|Ga0209153_1016927All Organisms → cellular organisms → Bacteria2369Open in IMG/M
3300026312|Ga0209153_1171371All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium786Open in IMG/M
3300026552|Ga0209577_10519074All Organisms → cellular organisms → Bacteria → Acidobacteria780Open in IMG/M
3300026552|Ga0209577_10642964All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium615Open in IMG/M
3300027002|Ga0209110_1011454Not Available1006Open in IMG/M
3300027307|Ga0209327_1073529All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium505Open in IMG/M
3300027706|Ga0209581_1003869All Organisms → cellular organisms → Bacteria12509Open in IMG/M
3300027750|Ga0209461_10001212All Organisms → cellular organisms → Bacteria5086Open in IMG/M
3300028778|Ga0307288_10230105All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium722Open in IMG/M
3300030496|Ga0268240_10055086All Organisms → cellular organisms → Bacteria861Open in IMG/M
3300030510|Ga0268243_1082271All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium732Open in IMG/M
3300030510|Ga0268243_1181649All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium519Open in IMG/M
3300030513|Ga0268242_1117452All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium565Open in IMG/M
3300030515|Ga0268254_10217436Not Available626Open in IMG/M
3300031901|Ga0307406_10450034All Organisms → cellular organisms → Bacteria1033Open in IMG/M
3300032004|Ga0307414_10364932All Organisms → cellular organisms → Bacteria1244Open in IMG/M
3300032005|Ga0307411_10951177All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium766Open in IMG/M
3300032159|Ga0268251_10288310All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium677Open in IMG/M
3300033988|Ga0334909_040834All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium592Open in IMG/M
3300034000|Ga0334918_052671All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium575Open in IMG/M
3300034002|Ga0334920_000309All Organisms → cellular organisms → Bacteria21534Open in IMG/M
3300034006|Ga0334934_002420All Organisms → cellular organisms → Bacteria2833Open in IMG/M
3300034007|Ga0334936_000002All Organisms → cellular organisms → Bacteria429137Open in IMG/M
3300034007|Ga0334936_057004All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium807Open in IMG/M
3300034008|Ga0334942_014909All Organisms → cellular organisms → Bacteria1967Open in IMG/M
3300034009|Ga0334944_030858All Organisms → cellular organisms → Bacteria1022Open in IMG/M
3300034009|Ga0334944_053944All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium764Open in IMG/M
3300034024|Ga0334927_000550All Organisms → cellular organisms → Bacteria18928Open in IMG/M
3300034025|Ga0334940_000261All Organisms → cellular organisms → Bacteria17267Open in IMG/M
3300034026|Ga0334946_000014All Organisms → cellular organisms → Bacteria279578Open in IMG/M
3300034026|Ga0334946_003808All Organisms → cellular organisms → Bacteria2313Open in IMG/M
3300034030|Ga0334952_000777All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes14786Open in IMG/M
3300034135|Ga0334929_003481All Organisms → cellular organisms → Bacteria → Acidobacteria4220Open in IMG/M
3300034137|Ga0334943_023631All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1156Open in IMG/M
3300034143|Ga0334961_089816All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium541Open in IMG/M
3300034145|Ga0334963_000886All Organisms → cellular organisms → Bacteria9490Open in IMG/M
3300034172|Ga0334913_031179All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1156Open in IMG/M
3300034173|Ga0334925_003461All Organisms → cellular organisms → Bacteria3723Open in IMG/M
3300034221|Ga0334937_008748All Organisms → cellular organisms → Bacteria2471Open in IMG/M
3300034221|Ga0334937_075044Not Available930Open in IMG/M
3300034221|Ga0334937_184010All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium578Open in IMG/M
3300034268|Ga0372943_0754772All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium644Open in IMG/M
3300034268|Ga0372943_0837601All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium610Open in IMG/M
3300034376|Ga0334923_001332All Organisms → cellular organisms → Bacteria → Acidobacteria4227Open in IMG/M
3300034376|Ga0334923_028037All Organisms → cellular organisms → Bacteria1185Open in IMG/M
3300034377|Ga0334931_000093All Organisms → cellular organisms → Bacteria57032Open in IMG/M
3300034391|Ga0334917_017934All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1134Open in IMG/M


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil13.53%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil12.03%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil9.77%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil9.02%
BiocrustEnvironmental → Terrestrial → Soil → Soil Crust → Unclassified → Biocrust7.52%
Sub-Biocrust SoilEnvironmental → Terrestrial → Soil → Unclassified → Desert → Sub-Biocrust Soil6.02%
Hypolithic BiocrustEnvironmental → Terrestrial → Soil → Soil Crust → Unclassified → Hypolithic Biocrust6.02%
SoilEnvironmental → Terrestrial → Soil → Sand → Desert → Soil5.26%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil4.51%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil3.01%
Exposed RockEnvironmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Exposed Rock2.26%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere2.26%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil1.50%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil1.50%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil1.50%
SoilEnvironmental → Terrestrial → Soil → Sand → Desert → Soil1.50%
Tabebuia Heterophylla RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere1.50%
Plant RootsHost-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots1.50%
AgaveHost-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface → Unclassified → Agave1.50%
AgaveHost-Associated → Plants → Phylloplane → Unclassified → Unclassified → Agave1.50%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil0.75%
Termite NestEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Termite Nest0.75%
Sugarcane Root And Bulk SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil0.75%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Desert → Soil0.75%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil0.75%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere0.75%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.75%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere0.75%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere0.75%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300002896Soil microbial communities from Manhattan, Kansas, USA - Sample 300um NexteraEnvironmentalOpen in IMG/M
3300002899Soil microbial communities from Manhattan, Kansas, USA - Combined assembly of Kansas soil 100-500um Nextera (ASSEMBLY_DATE=20140607)EnvironmentalOpen in IMG/M
3300003203Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2Host-AssociatedOpen in IMG/M
3300003321Sugarcane bulk soil Sample H1EnvironmentalOpen in IMG/M
3300004016Agave microbial communities from Guanajuato, Mexico - As.Ma.rzHost-AssociatedOpen in IMG/M
3300005167Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121EnvironmentalOpen in IMG/M
3300005175Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122EnvironmentalOpen in IMG/M
3300005184Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120EnvironmentalOpen in IMG/M
3300005354Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaGHost-AssociatedOpen in IMG/M
3300005466Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaGEnvironmentalOpen in IMG/M
3300005554Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110EnvironmentalOpen in IMG/M
3300005560Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119EnvironmentalOpen in IMG/M
3300005561Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148EnvironmentalOpen in IMG/M
3300005569Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154EnvironmentalOpen in IMG/M
3300005575Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151EnvironmentalOpen in IMG/M
3300005587Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103EnvironmentalOpen in IMG/M
3300005607Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen15_06102014_R2EnvironmentalOpen in IMG/M
3300005985Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2Host-AssociatedOpen in IMG/M
3300006169Termite nest microbial communities from Madurai, IndiaEnvironmentalOpen in IMG/M
3300006800Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109EnvironmentalOpen in IMG/M
3300006876Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200EnvironmentalOpen in IMG/M
3300006918Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100EnvironmentalOpen in IMG/M
3300007004Agricultural soil microbial communities from Utah to study Nitrogen management - NC CompostEnvironmentalOpen in IMG/M
3300007790Microbial communities of desert soil contaminated with blood from dead anthrax infected zebra in Etosha National Park, Namibia. Combined Assembly of 14 sequencing projectsEnvironmentalOpen in IMG/M
3300009098Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaGHost-AssociatedOpen in IMG/M
3300010036Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26EnvironmentalOpen in IMG/M
3300010037Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25EnvironmentalOpen in IMG/M
3300010038Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106EnvironmentalOpen in IMG/M
3300010040Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55EnvironmentalOpen in IMG/M
3300010041Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104AEnvironmentalOpen in IMG/M
3300010042Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105BEnvironmentalOpen in IMG/M
3300010044Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60EnvironmentalOpen in IMG/M
3300010045Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61EnvironmentalOpen in IMG/M
3300010166Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27EnvironmentalOpen in IMG/M
3300012469Combined assembly of Soil carbon rhizosphereHost-AssociatedOpen in IMG/M
3300014487Bulk soil microbial communities from Mexico - Magueyal (Ma) metaGEnvironmentalOpen in IMG/M
3300014488Bulk soil microbial communities from Mexico - San Felipe (SF) metaGEnvironmentalOpen in IMG/M
3300015357Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_0_1 metaGEnvironmentalOpen in IMG/M
3300018433Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116EnvironmentalOpen in IMG/M
3300018465Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 ISEnvironmentalOpen in IMG/M
3300018466Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 TEnvironmentalOpen in IMG/M
3300018468Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111EnvironmentalOpen in IMG/M
3300018482Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118EnvironmentalOpen in IMG/M
3300018890Soil crust microbial communities from Colorado Plateau, Utah, USA - mid-late stage, bundles v1EnvironmentalOpen in IMG/M
3300018920Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 ISEnvironmentalOpen in IMG/M
3300019377Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 TEnvironmentalOpen in IMG/M
3300019767Populus adjacent soil microbial communities from riparian zone of Oak Creek, Arizona, USA - 239 TEnvironmentalOpen in IMG/M
3300020146Soil microbial communities from Anza Borrego desert, Southern California, United States - S3+v_10-13CEnvironmentalOpen in IMG/M
3300020202Soil microbial communities from Anza Borrego desert, Southern California, United States - S1_10EnvironmentalOpen in IMG/M
3300020215Soil microbial communities from Anza Borrego desert, Southern California, United States - S1_5EnvironmentalOpen in IMG/M
3300021067Soil microbial communities from Anza Borrego desert, Southern California, United States - S3+v_20-13CEnvironmentalOpen in IMG/M
3300021184Soil microbial communities from Anza Borrego desert, Southern California, United States - S1+v_20EnvironmentalOpen in IMG/M
3300021265Switchgrass-associated microbial communities from reclaimed mine lands soil in West Virginia, United States ? Hobet_Shaw_3EnvironmentalOpen in IMG/M
3300021290Switchgrass-associated microbial communities from reclaimed mine lands soil in West Virginia, United States ? Hobet_Cave_2EnvironmentalOpen in IMG/M
3300021362Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R09EnvironmentalOpen in IMG/M
3300021374Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R08EnvironmentalOpen in IMG/M
3300021384Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9Host-AssociatedOpen in IMG/M
3300021445Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaGEnvironmentalOpen in IMG/M
3300026295Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026300Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026312Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120 (SPAdes)EnvironmentalOpen in IMG/M
3300026552Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)EnvironmentalOpen in IMG/M
3300027002Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM2H0_O1 (SPAdes)EnvironmentalOpen in IMG/M
3300027307Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_O2 (SPAdes)EnvironmentalOpen in IMG/M
3300027706Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen15_06102014_R2 (SPAdes)EnvironmentalOpen in IMG/M
3300027750Agave microbial communities from Guanajuato, Mexico - As.Ma.rz (SPAdes)Host-AssociatedOpen in IMG/M
3300028778Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_142EnvironmentalOpen in IMG/M
3300030496Bulk soil microbial communities from Mexico - Penjamo (Pe) metaG (v2)EnvironmentalOpen in IMG/M
3300030510Bulk soil microbial communities from Mexico - Magueyal (Ma) metaG (v2)EnvironmentalOpen in IMG/M
3300030513Bulk soil microbial communities from Mexico - San Felipe (SF) metaG (v2)EnvironmentalOpen in IMG/M
3300030515Agave microbial communities from Guanajuato, Mexico - Or.Sf.rz (v2)Host-AssociatedOpen in IMG/M
3300031901Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2Host-AssociatedOpen in IMG/M
3300032004Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3Host-AssociatedOpen in IMG/M
3300032005Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1Host-AssociatedOpen in IMG/M
3300032159Agave microbial communities from Guanajuato, Mexico - As.Ma.e (v2)Host-AssociatedOpen in IMG/M
3300033988Soil microbial communities from Mojave Desert, California, United States - 5NOCEnvironmentalOpen in IMG/M
3300034000Biocrust microbial communities from Mojave Desert, California, United States - 14HMCEnvironmentalOpen in IMG/M
3300034002Biocrust microbial communities from Mojave Desert, California, United States - 16HMCEnvironmentalOpen in IMG/M
3300034006Biocrust microbial communities from Mojave Desert, California, United States - 30SMCEnvironmentalOpen in IMG/M
3300034007Biocrust microbial communities from Mojave Desert, California, United States - 32SMCEnvironmentalOpen in IMG/M
3300034008Biocrust microbial communities from Mojave Desert, California, United States - 38SMCEnvironmentalOpen in IMG/M
3300034009Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 40SMSEnvironmentalOpen in IMG/M
3300034024Biocrust microbial communities from Mojave Desert, California, United States - 23HNCEnvironmentalOpen in IMG/M
3300034025Biocrust microbial communities from Mojave Desert, California, United States - 36SMCEnvironmentalOpen in IMG/M
3300034026Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 42SMSEnvironmentalOpen in IMG/M
3300034030Biocrust microbial communities from Mojave Desert, California, United States - 48SNCEnvironmentalOpen in IMG/M
3300034135Biocrust microbial communities from Mojave Desert, California, United States - 25HNCEnvironmentalOpen in IMG/M
3300034137Biocrust microbial communities from Mojave Desert, California, United States - 39SMCEnvironmentalOpen in IMG/M
3300034143Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 57SNSEnvironmentalOpen in IMG/M
3300034145Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 59SNSEnvironmentalOpen in IMG/M
3300034172Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 9HMSEnvironmentalOpen in IMG/M
3300034173Biocrust microbial communities from Mojave Desert, California, United States - 21HNCEnvironmentalOpen in IMG/M
3300034221Biocrust microbial communities from Mojave Desert, California, United States - 33SMCEnvironmentalOpen in IMG/M
3300034268Forest soil microbial communities from Eldorado National Forest, California, USA - SNFC_MG_FRD_1.2EnvironmentalOpen in IMG/M
3300034376Biocrust microbial communities from Mojave Desert, California, United States - 19HNCEnvironmentalOpen in IMG/M
3300034377Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 27HNSEnvironmentalOpen in IMG/M
3300034391Biocrust microbial communities from Mojave Desert, California, United States - 13HMCEnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI24802J43972_100919023300002896SoilVEFYAALVLALALAAIAGVLYFYAMFLEARTRQQKTYIAGLERANAELRRELQQTRVLLDRELEHSRTLWPELLDETGDLSRN*
JGIcombinedJ43975_1008006113300002899SoilMNQTDKKGIQGKKVVEFYAALVLALALAAIAGVLYFYVMFLEGRARQMKRHISELERSNEELRRDLQQTRALLDRELEHSRTLWPELLDDAGDVSRN*
JGI25406J46586_1025534513300003203Tabebuia Heterophylla RhizosphereVEFYAALILALTLAAVAAVLYFYVMFLEARSRQQKRHIAELERANAELSKELRQTKTLLEREIENGQDLWPELLDETGDPSHN*
soilH1_1013802143300003321Sugarcane Root And Bulk SoilVEFYAALVLALTLAAVACVLYFYTMFLEARSRQQRKYIQGLERANSELQKELAETRSLLERELEHSRALWPETLDGTGDFSRN*
Ga0058689_1002562223300004016AgaveVEFYAALVLALTLAAIAGVLYFYAMFLEARTRQQKKYIAGLERANAELRTELARTRALLDRELEHSRALWPELLDETNDLSRN*
Ga0066672_1028652913300005167SoilVEFYVALVLALALAAVAAVLFFYSMFLEARARQMKKQIAELERANAELLKELRQTKALLERELEHSRALWPEVLDESGDLSRN*
Ga0066673_1060245213300005175SoilVEFYAALVLALALAAVAAVLFFYSMFLEARGRQMKKHIAGLERTNADLLKELRQTKALLERELEHSRALWPEVLDESGDLSRN*
Ga0066671_1001584813300005184SoilVEFYAALVLALTLAAAAGVLYFYSMFLEARGRQMKKHISELERANAELLKELHQTKALLERELERGRELWPELIDESGDLSRN*
Ga0066671_1019578213300005184SoilVEFYAALVLALTLAAVAGVLYFYSMFLEARGRQMKKHIAELERANAELSKELRQTKALLERELERGRELWPELLDETGGLSRN*
Ga0066671_1031533013300005184SoilVEFYAALILALTLAAVAAVLFFYSMFLEVRARQMKKQIAELERANAELLKELRQTKALLERELEHSRALWP
Ga0066671_1038848513300005184SoilNRQAGKTAVEFYAALVLALALAAVAAVLFFYSMFLEARARQMKKHIAELERANAELLKELRQTKSLLERELKHSRALWPEVLDESGDLSRN*
Ga0066671_1105046913300005184SoilNRQAGKTAVEFYAALVLALALAAVAAVLFFYSMFLEARARQMKKHIAELERANADLLKELRQTKALLERELEHSRALWPEVLDESGDLSRN*
Ga0070675_10203812123300005354Miscanthus RhizosphereMQAGKKAVEFYAALVLALTLAAVACVLYFYTMFLEARSRQQKKYIAGLERANAELQKELAETRSLLERELEQSRALWPETLDNTGDFSRN*
Ga0070685_1059517413300005466Switchgrass RhizosphereMNQTKTQGSQGKKAVEFYAALVLALALAAIACVLYFYVMFLEGRARQMKRHIGEIERSNEELRRELQQTRTLLDRELEHSRTLWPELLDDAGDVSRN*
Ga0066661_1006843323300005554SoilVEFYAALVLALTLAAVAGVLYFYSMFLEARGRQMKKHITELERANAETLEELRQTKALLERELERSRELWPDVLDETGDLSRN*
Ga0066670_1013911613300005560SoilVEFYAALVLALALAAVAAVLFFYSMFLEARARQMKKHIAELERANAELLKELRQTKSLLERELEHSRALWPEVLDESGDLSRN*
Ga0066699_1091596213300005561SoilALALAAVAAVLFFYSMFLEARARQMKKHIAELERANADLLKELRQTKSLLERELEHSRALWPEVLDESGDLSRN*
Ga0066705_1088013113300005569SoilSGRNLVNRQAGKTAVEFYAALVLALALAAVAAVLFFYSMFLEARARQMKKHIAELERANAELLKELRQTKSLLERELEHSRALWPEVLDESGDLSRN*
Ga0066702_1034925123300005575SoilVEFYAALVLALTLAAVAAVLFFYSMFLEARARQMKKQIAELERANAELLKELRQMKALLERELEHSRALWPEVLDESGDLSHN*
Ga0066654_1045543113300005587SoilALALAAVAAVLFFYSMFLEVRARQMKKQIAELERANAELLKELRQTKALLERELEHSRALWPEVLDESGDLSRN*
Ga0070740_1000458523300005607Surface SoilVEFYAALVLALTLAAVAAVLFYYAMFLEARGRQMKKHMADLERVNLALAAELQQTKAQLEREVERSRALWPEVLDESGDFSHN*
Ga0081539_1007557233300005985Tabebuia Heterophylla RhizosphereVEFYAALVLALTLAAIAGVLYFYAMFLEARTRQQKKYIAGLERANAELRTELARTRALLDRELEHSRALWPELLDDAGDLSRN*
Ga0082029_127896713300006169Termite NestVEFYAALVLALALAAIAGVLYFYVMFLEGRARQMKRHINELERSNEELRRDLEQTRALLDRELEHSRTLWPELLDDAGDVSRN*
Ga0066660_1010303923300006800SoilVEFYAALVLALTLAAAAGVLYFYSMFLEARGRQMKKHITELERANAETLEELRQTKALLERELERSRELWPDVLDETGDLSRN*
Ga0066660_1053824413300006800SoilVEFYAALVLALALAAVAAVLFFYSMFLEVRARQMKKQIAELERANAELLKELRQTKALLERELEHSRALWPEVLDESGDLSRN*
Ga0079217_1006598233300006876Agricultural SoilVEFYAALVLALTLAAVAGVLYFYVMFLEARTRQQKRHIAGLERSNEELRRELEQTRSLLERELEHSRALWPEMLDDAGGLSRN*
Ga0079217_1164104313300006876Agricultural SoilQQPGRKSGKKAVEFYAALVLALTLAAVAGVLYFYVMFLEARTRQQKRHIAGLERSNEELRRELDQTRSLLDRELEHSRALWPEMLDDAGGLSRN*
Ga0079216_1028738423300006918Agricultural SoilVEFYAALVLALTLAAVAGVLYFYVMFLEARTRQQKRHIAGLERSNEELRRELEQTRSLLDRELEHSRALWPEMLDDAGGLSR
Ga0079218_1214433623300007004Agricultural SoilVEFYAALVLALTLAAIAGVLYFYSMFLEARTRQQKKHIDHLERANSELQRELRRTRALLDRELEHSRALWPELLDDAGSR
Ga0105679_1055414013300007790SoilFYAALVLALTLAAVACVLYFYTMFLEARSRQQRKYIAELERSNAELGRELSETRSLLERELEHSRAFWPETLDGTGDFSRN*
Ga0105245_1126928623300009098Miscanthus RhizosphereVEFYAALVLALTLAAIAGVLYFYAMFLEGRARQQRRHIAGLERSNEELRRELQQTRALLDRELEHSRTLWPELLDETGDLSRN*
Ga0126305_1007417533300010036Serpentine SoilVEFYAALVLALALAAIAGVLYFYVMFLEGRARQMKGHIAGLERSNGELRRELEQTRALLDRELEHSRTLWPELLDETGDLSRN*
Ga0126305_1012502713300010036Serpentine SoilVEFYAALVLALTLAAIAGVLYFYAMFLEARTRQQKTYIAGLERAKAELQRELRQTRALLDRELEHSRALWPELLDDAGDLSRN*
Ga0126304_1006957423300010037Serpentine SoilVEFYAALVLALTLAAIAGVLYFYAMFLEARTRQQKTYIAGLERAKAELQREPPQTRALLDRELEHSRALWPELLDDAGGLSRN*
Ga0126315_1081138723300010038Serpentine SoilAAIAGVLYFYVMFLEARTRQQKNHIARLERAKQELEGELRQTRALLERELEHSRALWPELLDETGDLSRN*
Ga0126315_1083575223300010038Serpentine SoilMNQTNKQGRQGKKAVEFYAALVLALALAAVAGVLYFYVMFLEGRSRQMKRYIGELERSNEELRGELEQTRALLDRELEHSRTLWPELLDDAGDVSRN*
Ga0126308_1071956813300010040Serpentine SoilVEFYAALVLALALAAIAGVLYFYVMFLEGRARQYKRHIAGLERSNGELRRELEQTRALLDRELEHSRTLWPELLDDAGDLSRN*
Ga0126308_1080344713300010040Serpentine SoilMGQNDKQGIQGKKAVEFYAALVLALALAAIAGVLYFYAMFLEARTRQQRTYIAGLERANAELRRELEQTRALLDRELEHSRALWPELLDE
Ga0126312_1095189913300010041Serpentine SoilVEFYAALVLALALAAAAGVLYFYVMFLEGRARQMKRHIGELERSNAELRRELEQTRSLLDRELEHSRTLWPELLDETGDISRN*
Ga0126314_1099611413300010042Serpentine SoilMNQTNKQGRQGKKAVEFYAALVLALALAAVAGVLYFYVMFLEGRSRQMKRHINELERSNGELRRDLEQTRALLDRELEHSRTLWPELLEDTGDVSRN*
Ga0126310_1052844723300010044Serpentine SoilMGQNDKQGIQGKKAVEFYAALVLALALAAVACVLYFYVMFLEGRSRQQRRHISELERSNGELRRDLEQTRAQLDRELEHSRTLWPELLDETGDLSRN*
Ga0126311_10000866143300010045Serpentine SoilVEFYAALVLALTLAAVACVLYFYTMFLEARSRQQRNHIAGLERANAELRRELSETRTLLERELEHSRAFWPETLDGSGDFSRN*
Ga0126311_1029578123300010045Serpentine SoilVEFYAALVLALTLAAMAGVLYFYSMFLEARTRQQKKHIERLERANAELQSELRRTRALLDRELEHSRALWPELLDDAGSRN*
Ga0126311_1125598113300010045Serpentine SoilTDKQGIQGKKAVEFYAALVLALALAAIAGVLYFYVMFLEGRARQMKRHITELERSNGELRRELEQTRALLDRELEHSRTLWPELLDDAGDVSRN*
Ga0126306_1004627633300010166Serpentine SoilVEFYAALVLALTLAAVAGVLYFYTMFLEARSRQQWKYIAGLERANAELRRELNETRSLLERELEQSRAFWPETLDGSGDLSRN*
Ga0126306_1044038223300010166Serpentine SoilVENDKQGSQGKKAVEFYAALVLALALAAAAGVLYFYVMFLEGRARQMKRHIGELERSNAELRRELEQTRALLDRELEHSRTLWPELLDETGDISRN*
Ga0126306_1097250513300010166Serpentine SoilSQGKKAVEFYAALVLALALAAIAGVLYFYVMFLEGRARQMRRHIGELERSNEELRRDLEQTRALLDRELEHSRTLWPELLDETGDLSRN*
Ga0150984_11646303423300012469Avena Fatua RhizosphereNESNQPTGKKAVEFYAALVLALALAAIAGVLYFYVMFLEGRSRQLKRHIGELERSNQELRRELEQTRALLDRELEHSRTLWPELLDDAGDLSRN*
Ga0182000_1005735413300014487SoilVEFYAALVLALTLAAIAGVLYFYVMFLEARTRQQKRYIAGLERANAELRSELNETRALLDRELEHSRALWPELLDETNDLSRN*
Ga0182000_1021879913300014487SoilMNQNDKQGRQGEKAVEFYAALVLALALAAIAGVLYFYVMFLEGRSRLMKRHINDLERSNGELRRELEQTRALLDRELEHSRTLWPELLDDAGDLSRN*
Ga0182000_1043142113300014487SoilVEFYAALVLALTLAAVAGVLYFYSMFLEARGRQMKKHITELERANAELSKELRQTKALLERELERDRELWPELLDETGGLSRN*
Ga0182001_1015527823300014488SoilVEFYAALVLALTLAAIAGVLYFYVMFLEARTRQQKKYIAGLERAHAELQRELRRTRALLDRELEHSRAFWPELLDDAGDLSRN*
Ga0182001_1036275823300014488SoilVEFYAALVLALTLAAVAGVLYFYSMFLEARARQMKRHISELERANAELSKELRQTKALLERELERSRELWPELLDEPGGLSRN*
Ga0182001_1053167023300014488SoilVEFYAALVLALTLAAIAGVLYFYSMFLEARTRQQKRYIAGLEHANAELRTELAQTRALLDRELEHSRALWPELLDETNDLSR
Ga0134072_1046598813300015357Grasslands SoilVEFYAALVLALALAAVAAVLFFYSMFLEARARQMKKHIAELERANAELLKELRQTKALLERELEHSRALWPEVLDESGDLSRN*
Ga0066667_1089962613300018433Grasslands SoilVEFYAALVLALALAAAAAVLFFYSMFLEARARQMKKHIAELERANAELLKELRQTKALLERELEHSRALWPEVLDESGDLSRN
Ga0190269_1002852213300018465SoilLALTLAAVAGVLYFYVMFLEARTRQQKRHIAGLERSNGELRRELEQTRALLDRELEHSRTLWPELLDDAGDLSRN
Ga0190269_1022057823300018465SoilVEFYAALVLALALAAIAGVLYFYVMFLEGRARQQRRHITELERSNEELRRELEQTRALLDRELEHSRTLWPELLDDAGDVSRN
Ga0190269_1068749113300018465SoilVEFYAALVLALTLAAIAGVLYFYAMFLEARTRQQKKYIDGLERAHAELQRELRRTRALLDRELEHSRALWPELLDDAGDL
Ga0190268_1010537423300018466SoilMNQTNKQGSQGKKAVEFYAALVLALALAAIAGVLYFYAMFLEAQGRRQREHIAGLERSNEELRRELQQTRALLDQELEHNRTLWPELLDETGDLSRN
Ga0190268_1090872513300018466SoilVEFYAALVLALTLAAIAGVLYFYSMFLEARTRQQKKHIDHLERANAELQRELRRTRALLDQELEHSRALWPELLDDAGSRN
Ga0066662_1000811613300018468Grasslands SoilVEFYAALVLALTLAAAAGVLYFYSMFLEARGRQMKKHITELERANAETLEELRQTKALLERELERSRELWPDVLDETGDLSRN
Ga0066662_1016548523300018468Grasslands SoilVEFYAALVLALTLAAVAGVLYFYSMFLEARGRQMKKHIAELERANAELSKELRQTKALLERELERGRELWPELLDETGGLSRN
Ga0066669_1068613813300018482Grasslands SoilVEFYAALVLALALAAVAAVLFFYSMFLEARGRQMKKHIAGLERTNADLLKELRQTKALLERELEHSRALWPEVLDESGDLSRN
Ga0193595_108933523300018890SoilVEFYAALVLALALAAVAGVLYFYVMFLEGRSRQMRRHINGLERSNEELRRELEQTRALLDRELEHSRTLWPELLDETGDLSRN
Ga0193595_111607623300018890SoilVEFYAALVLALTLAAIAAVLYFYAMFLEARTRQQKTHIARLERSNTELLIELRESRALLERELEHSRAFWPEVLDETGDLSRN
Ga0190273_1092945123300018920SoilVEFYAALVLALTLAAVAGVLYFYTMFLEARSRQQRKYIAGLERANAELRRELNETRSLLERELEHSRAFWPETLDGSGDLSRN
Ga0190264_1194372113300019377SoilMRQTDKQGRQGKKAVEFYAAIVLALALAAIAGVLYFYVMFLEGRARQQKRHIADLERSNEELRRELAETRARLDRELEHSRTLWPELLDDAGDVSRN
Ga0190267_1020430913300019767SoilVEFYAALVLALTLAAIAGVLYFYSMFLEARTRQQKQHIDHLERANAELQRELRRTRALLDQELEHSRALWPELLDDAGSRN
Ga0190267_1088129313300019767SoilVEFYVALVLALTLAAIAGVLYFYAMFLEARTRQQKKHIAGLERANAELTAELAQTRALLDRELEHSRALWPELLDETRN
Ga0196977_101760323300020146SoilMNQTDKQGSQGKKVVEFYAALVLALALAAIAGVLYFYVMFLEGRSRQMKRHIAELERSNEELRRDLEQTRALLDRELEHSRTLWPELLDDAGDVSRN
Ga0196964_1049737313300020202SoilVEFYAALVLALTLAAIAGVLYFYVMFLEARTRQQKRYIAGLERANAELRRELGETRALLDRELEYSRAFWPELLDETGDLSRN
Ga0196963_1018028923300020215SoilVEFYAALVLALTLAAVAAVLYFYAMFLEARTRQQKRHIAGLERDNEELRGELARTRALLERELEHSRALWPELLDETHN
Ga0196963_1040455613300020215SoilMRQTDKQGIQGKKAVEFYAALVLALALAAVAGVLYFYVMFLEGRARQMKRHITELERSNEGLRRELEQTRALLDRELEH
Ga0196978_1000003413300021067SoilMKQTDKQGIQGKKVVEFYAALVLALALAAIAGVLYFYVMFLEGRSRQMKRHINELERSNEELRRDLEQTRALLDRELEHSRTLWPELLDDAGDVSRN
Ga0196959_1014065523300021184SoilMSQTYKQGSQGKKVVEFYAALVLALALAAIAGVLYFYVMFLEGRSRQMKRHIAELERSNEELRRDLEQTRALLDRELEHSRTLWPELLDDAGDVSRN
Ga0213906_10006723300021265SoilVEFYAALVLALTLAAIAGVLYFYAMFLEARTRQQKKYIAGLERANAELRGELAQTRALLDRELEHSRALWPELLDDAGDLSRN
Ga0213902_10019023300021290SoilVEFYAALVLALALAAIAGVLYFYVMFLEGRSRQMKGHIADLERSNEGLRRELEETRALLDRELEHSRTLWPELLDDAGDVSRN
Ga0213882_1036472613300021362Exposed RockVEFYAALVLALTLAAVAAVLFYYAMFLEARGRQMKKHMADLERVNLALAAELQQTKARLEREVEQSRGLWPEVLDESGDFSRN
Ga0213882_1050821013300021362Exposed RockGKKAVEFYAALVLALTLAAIAGVLYFYVMFLEGRSRQMKGHINELERSNTELRRELEQTRALLDRELEHSRTLWPELLDDAGDVSRN
Ga0213881_1018736913300021374Exposed RockMNQKAKQGSQGKKAVEFYAALVLALTLAAIAGVLYFYVMFLEGRSRQMKRHIKDLERSNEALRRELKQTRLLLDRELEHS
Ga0213876_100000113163300021384Plant RootsVEFYAALVLALTLAAIAGVLYFYVMFLEGRSRQMKGHINELERSNTELRRELEQTRALLDRELEHSRTLWPELLDDAGDVSRN
Ga0213876_10000205373300021384Plant RootsVEFYAALVLALALAAIAGVLYFYVMFLEGRARQMKRHINDLERSNEELRRELEQTRALLDRELEHSRTLWPELLDDAGDLSRN
Ga0182009_1079811823300021445SoilMRGKGCNESNQQTGKKAVEFYAALVLALALAAIAGVLYFYVMFLEGRSRQMKRHIGELERSNQELRRELAQTRDLLDRELEHSRTLWPELLDDAGDVSRN
Ga0209234_101709423300026295Grasslands SoilVEFYAALVLALTLAAVAAVLFFYSMFLEARARQMKKQIAELERANAELLKELRQTKALLERELEHSRALWPEVLDESGDLSRN
Ga0209027_117607623300026300Grasslands SoilVEFYAALVLALALAAVAAVLFFYSMFLEARAHQMKKHIAELERANADLLKELRQTKSLLERELEHSRALWPEVLDESGDLSRN
Ga0209153_101692723300026312SoilVEFYAALVLALTLAAAAGVLYFYSMFLEARGRQMKKHISELERANAELLKELHQTKALLERELERGRELWPELIDESGDLSRN
Ga0209153_117137123300026312SoilVEFYAALVLALALAAVAAVLFFYSMFLEARARQMKKHIAELERANADLLKELRQTKALLERELEHSRALWPEVLDESGDLSRN
Ga0209577_1051907413300026552SoilVEFYAALVLALALAAVAAVLFFYSMFLEVRARQMKKQIAELERANAELLKELRQTKALLERELEHSRALWPEVLDESGDLSRN
Ga0209577_1064296413300026552SoilVEFYAALVLALALAAVAAVLFFYSMFLEARARQMKKHIAELERANADLLKELRQTKSLLERELEHSRALWPEVLDESGDLSRN
Ga0209110_101145413300027002Forest SoilVEFYAALVLALTLAAVAAILYYYAMFLEARGRQMKKHLADLERVNIALSKELQQTKAQLEREVEQSRALWPEVLDESGDFAKRVNTQMVGIEKLE
Ga0209327_107352923300027307Forest SoilVEFYAALVLALTLAAVAAVLYYYAMFLEARGRQMKKHLADLERVNIALSKELQQTKAQLEREVEQSRALWPEVLDESGDLSRN
Ga0209581_1003869103300027706Surface SoilVEFYAALVLALTLAAVAAVLFYYAMFLEARGRQMKKHMADLERVNLALAAELQQTKAQLEREVERSRALWPEVLDESGDFSHN
Ga0209461_1000121253300027750AgaveVEFYAALVLALTLAAIAGVLYFYAMFLEARTRQQKKYIAGLERANAELRTELARTRALLDRELEHSRALWPELLDETNDLSRN
Ga0307288_1023010523300028778SoilMRQTDKQGSQGKKAVEFYAALVLALALAAIAGVLYFYAMFLEARARQQRKHIAGLERSNEELRRELQQTRALLDRELEHSRTLWPELLDETGDLSRN
Ga0268240_1005508613300030496SoilMNQTDKQGIQGKKVVEFYAALVLALALAAIAGVLYFYVMFLEGRARQMKRHITELERSNEELRRDLAQTRALLDRELEHSRTLWPELLDDAGDVSRN
Ga0268243_108227113300030510SoilVEFYAALVLALALAAIAGVLYFYVMFLEGRSRQMKRHIADLERSNGELRRELEQTRALLDRELEHSRTLWPELLDVAGDVSRN
Ga0268243_118164913300030510SoilKSAGRGSNVENQQAGKKAVEFYAALVLALTLAAIAGVLYFYVMFLEARTRQQKRYIAGLERANAELRSELNETRALLDRELEHSRALWPELLDDAGDLSRN
Ga0268242_111745223300030513SoilVEFYAALVLALTLAAVAGVLYFYSMFLEARARQMKRHISELERANAELSKELRQTKALLERELERSRELWPELLDEPGGLSRN
Ga0268254_1021743613300030515AgaveVEFYAALVLALTLAAIAAVLYFYAMFLEARTRQQKKYIAGLERTNAELCTELAQTRALLDRELEHSRALWPELLDETNDLSRN
Ga0307406_1045003413300031901RhizosphereMKQTDKQGSKGKKVVEFYAALVLALALAAIAGVLYFYVMFLEGRSRRQKKYIAELERSNGELRRELEQTRALLDRELEHSRTFWPELLDDAGDLSRN
Ga0307414_1036493223300032004RhizosphereMKQTDKQGSKGKKVVEFYAALVLALALAAIAGVLYFYVMFLEGRSRQQKKYIAELERSNGELRRELEQTRALLDRELEHSRTFWPELLDDAGDLSRN
Ga0307411_1095117723300032005RhizosphereVEFYAALVLALTLAAIAGVLYFYAMFLEARTRQQKTYIAGLERANAELQRELGQTRALLDRELEHSRALWPELLDETGDLSKK
Ga0268251_1028831023300032159AgaveMNQNDKQGRQGEKAVEFYAALVLALALAAIAGVLYFYVMFLEGRSRQMKRHIGELERSNEGLRGELEQTRALLDRELEHSRTLW
Ga0334909_040834_18_2693300033988SoilVEFYAALVLALTLAAMAGVLYFYAMFLEARTRQQKRHIAELERSNTDLRAELAQTRALLDRELEHSRALWPELLDETNDLSRN
Ga0334918_052671_3_2453300034000Hypolithic BiocrustVEFYAALVLALTLAAIAGVLYFYVMFLEGRSRQMKRHIAELERSNEELRRELDQTRALLDRELEHSRTLWPELLDDAGDVS
Ga0334920_000309_5543_58273300034002Hypolithic BiocrustMWKTKQAGKKAVEFYAALVLALTLAAIAAVLYFYAMFLEARTRQQKRYIAGLERANAELQAELRGTRSLLERELEHSRALWPELLDDAGDPSRN
Ga0334934_002420_1642_18933300034006BiocrustVEFYAALVLALALAAIAGVLYFYVMFLEGRSRQMKRHIGELERSNGELRLELQQTRALLDRELEHSRTLWPELLDETGDISRN
Ga0334936_000002_419206_4194573300034007BiocrustVEFYAALVLALTLAAIAGVLYFYAMFLEARTRQQKKYIADLERSQAELQAELQRTRALLDRELEHSRALWPELLDDAGDLSRN
Ga0334936_057004_63_3143300034007BiocrustVEFYAALVLALALAAIAGVLYFYVMFLEGRSRHQKRHIAGLERSNAELRRELEQTRALLDRELEHSRTLWPELLDETGDLSRN
Ga0334942_014909_1325_15763300034008BiocrustVEFYAALVLALALAAVAGVLYFYVMFLEGRSRQMRRHLNGLERSNEELRRELEQTRALLDRELEHSRTLWPELLDETGDLSRN
Ga0334944_030858_459_7403300034009Sub-Biocrust SoilVENQPAGKKAVEFYAALVLALTLAAIAGVLFFYAMFLEARTRQQKRYIAGLERANAELQSELRRTRARLERELEYSRAFWPELLDDAGDLSPN
Ga0334944_053944_26_2773300034009Sub-Biocrust SoilVEFYVALVLALTLAAIAGVLYFYAMFLEARTRQQKKYIAGLERYNEELRAELARTGALLERELEHSRALWPELLDETNDISRN
Ga0334927_000550_15871_161223300034024Hypolithic BiocrustVEFYAALVLALALAAVAGVLYFYVMFLEGRSRHQTRHIAELERSNGELRRELEQTRALLDRELEHSRTLWPELLDETGDLSRN
Ga0334940_000261_2519_27703300034025BiocrustVEFYAALVLALTLAAIAGALYFYAMFLEARTRQQKTYIAGLERSNSELQRELRRTRALLDRELEHSRAFWPEILDETGDLSRN
Ga0334946_000014_16036_162873300034026Sub-Biocrust SoilVEFYAALVLALTLAAIAGLLYFYAMFLEARTRQQKAHIARLERANAELQAELRRTRAELDRELEHSRALWPDLLDETGDLSRN
Ga0334946_003808_1069_13443300034026Sub-Biocrust SoilVENQPAGKKAVEFYAALVLALTLAAIAGVLFFYAMFLEARTRQQRRYIAGLERANAELQSELRRTRARLERELEYSRAFWPELLDDAGLKQ
Ga0334952_000777_13548_137993300034030BiocrustVEFYAALVLALTLAAIAAVLYFYAMFLEARTRQQRDYIAGLERSNRELQRELRETRELLDRELEHSRALWPELLDDAGDLSRN
Ga0334929_003481_963_12143300034135Hypolithic BiocrustVEFYAALVLALTLAAIAAVLYFYAMFLEARTRQQKTHIARLERSNSELLRELREARAQLERELEHSRAFWPELLDETGDLSRN
Ga0334943_023631_845_10903300034137BiocrustVEFYAALVLALTLAAVAAVLYFYVMFLEARTRQQKKYIAELERSNRELRGELDETRARLDRELEYSRALWPELLDDAELGK
Ga0334961_089816_1_2313300034143Sub-Biocrust SoilVEFYAALVLALTLAAIAGVLYFYAMFLEARTRQQKKHIAELERSDAELRAELARTRALLDRELEHSRALWPELLDET
Ga0334963_000886_7915_81993300034145Sub-Biocrust SoilMGKTKQAGKKAVEFYAALVLALTLAAIAAVLYFYAMFLEARTRQQRRHIAGLERSNAELQDELRSTRALLERELEHSRALWPEMLDDAGDPSRN
Ga0334913_031179_49_3003300034172Sub-Biocrust SoilVEFYAALVLALTLAAIAGVLYFYVMFLEGRSRQMKRHIAELERSNEELRRELDQTRALLDRELEHSRTLWPELLDDAGDVSRN
Ga0334925_003461_1170_14213300034173Hypolithic BiocrustVEFYAALVLALALAAIAGVLYFYAMFLEARARQQRKHIAGLERSNEELRRELEQTRALLDRELEHSRTLWPELLDETGDLSRN
Ga0334937_008748_2208_24593300034221BiocrustVEFYAALVLALALAAVAGVLYFYVMFLEGRSRQMKRHIAALERSNEELRRELEQTRALLDRELEHSRTLWPELLDETGDLSRN
Ga0334937_075044_604_8553300034221BiocrustVEFYAALVLALTLAAVAGVLYFYTMFLEARARQQRRHLAGLERANEELRQELARTRSLLERELEHSRAFWPEVLDGSGDLSRN
Ga0334937_184010_1_2343300034221BiocrustVEFYAALVLALTLAAVACVLYFYTMFLEARSRQQRNHIAGLERANAELRRELSETRALLERELEHSRALWPETLDGTG
Ga0372943_0754772_95_3853300034268SoilMRQTEQGRQGKKAVEFYAALVLALALAAIAGVLYFYVMFLEGRSRQMKRHIGELERSNQELRRELAQTRALLDRELEHSRTLWPELLDDAGDVSRN
Ga0372943_0837601_310_5613300034268SoilVEFYAALVLALTLAAAAGVLYFYSMFLEARGRQMKKHIAELERANAAMLEELRQTKTLLERELERSRELWPEVLDESGDLSRN
Ga0334923_001332_2724_29753300034376Hypolithic BiocrustVEFYAALVLALTLAAIAGVLYFYAMFLEARTRQQKSYIAGLERANSELQRELRQTRALLDRELEHSRALWPELLDETGDLSRN
Ga0334923_028037_935_11833300034376Hypolithic BiocrustMSQTDKQGIQGKKAVEFYAALVLALALAAVAGVLYFYVMFLEARSRQMKRHITELERSNGELRRDLEETRALLDRELEHSRTL
Ga0334931_000093_10273_105243300034377Sub-Biocrust SoilVEFYAALVLALALAAIAGVLYFYVMFLEGRSRQMKRHIGELERSNGELRLELRQTRALLERELEHSRTLWPELLDETGDLSRN
Ga0334917_017934_729_9803300034391Hypolithic BiocrustVEFYAALVLALALAAIAGVLYFYVMFLEGRSRQMKRHITELERSNGELRRELEQTRALLDRELEHSRTLWPELLDDAGDPSRN

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.