Metagenome / Metatranscriptome Family F060311

Basic Information
Family ID	F060311
Family Type	Metagenome / Metatranscriptome
Number of Sequences	133
Average Sequence Length	53 residues
Representative Sequence	AAFVVETGPIGYIALMVSKAQRIVLVDHTRLPWRFFGRLTAVQAGL
Number of Associated Samples	113
Number of Associated Scaffolds	133

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	22.14 %
% of genes near scaffold ends (potentially truncated)	45.11 %
% of genes from short scaffolds (< 2000 bps)	81.95 %
Associated GOLD sequencing projects	104
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.32

Most Common Taxonomy
Group	Bacteria (75.188 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere (9.774 % of family members)
Environment Ontology (ENVO)	Unclassified (21.053 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (35.338 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 39.19% β-sheet: 0.00% Coil/Unstructured: 60.81%
Feature Viewer

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Pfam ID	Name	% Frequency in 133 Family Scaffolds
PF00330	Aconitase	57.14
PF01245	Ribosomal_L19	27.07
PF01746	tRNA_m1G_MT	6.02
PF06262	Zincin_1	2.26
PF05239	PRC	1.50
PF03992	ABM	1.50
PF00486	Trans_reg_C	0.75
PF00497	SBP_bac_3	0.75
PF00482	T2SSF	0.75
PF04055	Radical_SAM	0.75
PF03301	Trp_dioxygenase	0.75
PF00849	PseudoU_synth_2	0.75

COG ID	Name	Functional Category	% Frequency in 133 Family Scaffolds
COG0335	Ribosomal protein L19	Translation, ribosomal structure and biogenesis [J]	27.07
COG3824	Predicted Zn-dependent protease, minimal metalloprotease (MMP)-like domain	Posttranslational modification, protein turnover, chaperones [O]	2.26
COG0564	Pseudouridine synthase RluA, 23S rRNA- or tRNA-specific	Translation, ribosomal structure and biogenesis [J]	0.75
COG1187	Pseudouridylate synthase RsuA, specific for 16S rRNA U516 and 23S rRNA U2605	Translation, ribosomal structure and biogenesis [J]	0.75
COG3483	Tryptophan 2,3-dioxygenase (vermilion)	Amino acid transport and metabolism [E]	0.75

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	76.69 %
Unclassified	root	N/A	23.31 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	76.69 %
Unclassified	root	N/A	23.31 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	75.19 %
Unclassified	root	N/A	23.31 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	1.50 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	63.16 %
Unclassified	root	N/A	23.31 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	5.26 %
Viridiplantae	kingdom	All Organisms → cellular organisms → Eukaryota → Viridiplantae	1.50 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	63.16 %
Unclassified	root	N/A	23.31 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	5.26 %
Streptophyta	phylum	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta	1.50 %

Name	Rank	Taxonomy	Distribution
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	40.60 %
Unclassified	root	N/A	23.31 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	5.26 %
Streptophytina	subphylum	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina	1.50 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	23.31 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	10.53 %
Bacteroidia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia	5.26 %
Xanthobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae	3.76 %
Embryophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	1.50 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	0.75 %
Rhodobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	23.31 %
Bacteroidales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales	5.26 %
Pseudolabrys	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys	3.01 %
Afipia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia	3.01 %
Tracheophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta	1.50 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.75 %
Rhodopseudomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Rhodopseudomonas	0.75 %
Rhodovulum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Rhodovulum	0.75 %
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	23.31 %
Rikenellaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Rikenellaceae	5.26 %
unclassified Pseudolabrys	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys	3.01 %
Euphyllophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta	1.50 %
unclassified Rhodovulum	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Rhodovulum → unclassified Rhodovulum	0.75 %
unclassified Rhodoplanes	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes	0.75 %
Rhodopseudomonas palustris	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Rhodopseudomonas → Rhodopseudomonas palustris	0.75 %
unclassified Afipia	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → unclassified Afipia	0.75 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	23.31 %
Alistipes	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Rikenellaceae → Alistipes	5.26 %
Pseudolabrys sp. Root1462	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462	3.01 %
Spermatophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta	1.50 %
Afipia sp. P52-10	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → unclassified Afipia → Afipia sp. P52-10	0.75 %
Rhodovulum sp. PH10	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Rhodovulum → unclassified Rhodovulum → Rhodovulum sp. PH10	0.75 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	0.75 %
Rhodopseudomonas palustris	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Rhodopseudomonas → Rhodopseudomonas palustris	0.75 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	23.31 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Rikenellaceae → Alistipes → environmental samples	5.26 %
Pseudolabrys sp. Root1462	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462	3.01 %
Magnoliopsida	class	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida	1.50 %
Afipia sp. P52-10	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → unclassified Afipia → Afipia sp. P52-10	0.75 %
Rhodovulum sp. PH10	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Rhodovulum → unclassified Rhodovulum → Rhodovulum sp. PH10	0.75 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	0.75 %
Rhodopseudomonas palustris	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Rhodopseudomonas → Rhodopseudomonas palustris	0.75 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	23.31 %
Alistipes finegoldii CAG:68	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Rikenellaceae → Alistipes → environmental samples → Alistipes finegoldii CAG:68	5.26 %
Pseudolabrys sp. Root1462	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462	3.01 %
Mesangiospermae	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae	1.50 %
Afipia sp. P52-10	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → unclassified Afipia → Afipia sp. P52-10	0.75 %
Rhodovulum sp. PH10	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Rhodovulum → unclassified Rhodovulum → Rhodovulum sp. PH10	0.75 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	0.75 %
Rhodopseudomonas palustris	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Rhodopseudomonas → Rhodopseudomonas palustris	0.75 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	23.31 %
Alistipes finegoldii CAG:68	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Rikenellaceae → Alistipes → environmental samples → Alistipes finegoldii CAG:68	5.26 %
Pseudolabrys sp. Root1462	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462	3.01 %
eudicotyledons	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons	1.50 %
Afipia sp. P52-10	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → unclassified Afipia → Afipia sp. P52-10	0.75 %
Rhodovulum sp. PH10	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Rhodovulum → unclassified Rhodovulum → Rhodovulum sp. PH10	0.75 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	0.75 %
Rhodopseudomonas palustris	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Rhodopseudomonas → Rhodopseudomonas palustris	0.75 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	23.31 %
Alistipes finegoldii CAG:68	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Rikenellaceae → Alistipes → environmental samples → Alistipes finegoldii CAG:68	5.26 %
Pseudolabrys sp. Root1462	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462	3.01 %
Gunneridae	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae	1.50 %
Afipia sp. P52-10	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → unclassified Afipia → Afipia sp. P52-10	0.75 %
Rhodovulum sp. PH10	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Rhodovulum → unclassified Rhodovulum → Rhodovulum sp. PH10	0.75 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	0.75 %
Rhodopseudomonas palustris	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Rhodopseudomonas → Rhodopseudomonas palustris	0.75 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	23.31 %
Alistipes finegoldii CAG:68	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Rikenellaceae → Alistipes → environmental samples → Alistipes finegoldii CAG:68	5.26 %
Pseudolabrys sp. Root1462	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462	3.01 %
Pentapetalae	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae	1.50 %
Afipia sp. P52-10	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → unclassified Afipia → Afipia sp. P52-10	0.75 %
Rhodovulum sp. PH10	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Rhodovulum → unclassified Rhodovulum → Rhodovulum sp. PH10	0.75 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	0.75 %
Rhodopseudomonas palustris	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Rhodopseudomonas → Rhodopseudomonas palustris	0.75 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	23.31 %
Alistipes finegoldii CAG:68	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Rikenellaceae → Alistipes → environmental samples → Alistipes finegoldii CAG:68	5.26 %
Pseudolabrys sp. Root1462	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462	3.01 %
rosids	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids	1.50 %
Afipia sp. P52-10	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → unclassified Afipia → Afipia sp. P52-10	0.75 %
Rhodovulum sp. PH10	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Rhodovulum → unclassified Rhodovulum → Rhodovulum sp. PH10	0.75 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	0.75 %
Rhodopseudomonas palustris	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Rhodopseudomonas → Rhodopseudomonas palustris	0.75 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	23.31 %
Alistipes finegoldii CAG:68	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Rikenellaceae → Alistipes → environmental samples → Alistipes finegoldii CAG:68	5.26 %
Pseudolabrys sp. Root1462	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462	3.01 %
malvids	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → malvids	1.50 %
Afipia sp. P52-10	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → unclassified Afipia → Afipia sp. P52-10	0.75 %
Rhodovulum sp. PH10	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Rhodovulum → unclassified Rhodovulum → Rhodovulum sp. PH10	0.75 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	0.75 %
Rhodopseudomonas palustris	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Rhodopseudomonas → Rhodopseudomonas palustris	0.75 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	23.31 %
Alistipes finegoldii CAG:68	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Rikenellaceae → Alistipes → environmental samples → Alistipes finegoldii CAG:68	5.26 %
Pseudolabrys sp. Root1462	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462	3.01 %
Malvales	order	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → malvids → Malvales	1.50 %
Afipia sp. P52-10	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → unclassified Afipia → Afipia sp. P52-10	0.75 %
Rhodovulum sp. PH10	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Rhodovulum → unclassified Rhodovulum → Rhodovulum sp. PH10	0.75 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	0.75 %
Rhodopseudomonas palustris	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Rhodopseudomonas → Rhodopseudomonas palustris	0.75 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	23.31 %
Alistipes finegoldii CAG:68	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Rikenellaceae → Alistipes → environmental samples → Alistipes finegoldii CAG:68	5.26 %
Pseudolabrys sp. Root1462	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462	3.01 %
Malvaceae	family	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → malvids → Malvales → Malvaceae	1.50 %
Afipia sp. P52-10	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → unclassified Afipia → Afipia sp. P52-10	0.75 %
Rhodovulum sp. PH10	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Rhodovulum → unclassified Rhodovulum → Rhodovulum sp. PH10	0.75 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	0.75 %
Rhodopseudomonas palustris	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Rhodopseudomonas → Rhodopseudomonas palustris	0.75 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	23.31 %
Alistipes finegoldii CAG:68	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Rikenellaceae → Alistipes → environmental samples → Alistipes finegoldii CAG:68	5.26 %
Pseudolabrys sp. Root1462	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462	3.01 %
Malvoideae	subfamily	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → malvids → Malvales → Malvaceae → Malvoideae	1.50 %
Afipia sp. P52-10	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → unclassified Afipia → Afipia sp. P52-10	0.75 %
Rhodovulum sp. PH10	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Rhodovulum → unclassified Rhodovulum → Rhodovulum sp. PH10	0.75 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	0.75 %
Rhodopseudomonas palustris	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Rhodopseudomonas → Rhodopseudomonas palustris	0.75 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	23.31 %
Alistipes finegoldii CAG:68	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Rikenellaceae → Alistipes → environmental samples → Alistipes finegoldii CAG:68	5.26 %
Pseudolabrys sp. Root1462	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462	3.01 %
Gossypium	genus	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → malvids → Malvales → Malvaceae → Malvoideae → Gossypium	1.50 %
Afipia sp. P52-10	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → unclassified Afipia → Afipia sp. P52-10	0.75 %
Rhodovulum sp. PH10	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Rhodovulum → unclassified Rhodovulum → Rhodovulum sp. PH10	0.75 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	0.75 %
Rhodopseudomonas palustris	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Rhodopseudomonas → Rhodopseudomonas palustris	0.75 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	23.31 %
Alistipes finegoldii CAG:68	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Rikenellaceae → Alistipes → environmental samples → Alistipes finegoldii CAG:68	5.26 %
Pseudolabrys sp. Root1462	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462	3.01 %
Gossypium hirsutum	species	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → malvids → Malvales → Malvaceae → Malvoideae → Gossypium → Gossypium hirsutum	1.50 %
Afipia sp. P52-10	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → unclassified Afipia → Afipia sp. P52-10	0.75 %
Rhodovulum sp. PH10	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Rhodovulum → unclassified Rhodovulum → Rhodovulum sp. PH10	0.75 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	0.75 %
Rhodopseudomonas palustris	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Rhodopseudomonas → Rhodopseudomonas palustris	0.75 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.75 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000890\|JGI11643J12802_12184819	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1230	Open in IMG/M
3300001867\|JGI12627J18819_10231180	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Rhodopseudomonas → Rhodopseudomonas palustris	745	Open in IMG/M
3300003996\|Ga0055467_10078974	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	904	Open in IMG/M
3300004479\|Ga0062595_100523105	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	899	Open in IMG/M
3300004633\|Ga0066395_10894392	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	537	Open in IMG/M
3300005168\|Ga0066809_10219749	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Rhodovulum → unclassified Rhodovulum → Rhodovulum sp. PH10	520	Open in IMG/M
3300005293\|Ga0065715_10113004	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2507	Open in IMG/M
3300005327\|Ga0070658_10353266	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1258	Open in IMG/M
3300005330\|Ga0070690_101597133	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	529	Open in IMG/M
3300005332\|Ga0066388_100020612	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → unclassified Afipia → Afipia sp. P52-10	5757	Open in IMG/M
3300005332\|Ga0066388_106819939	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	575	Open in IMG/M
3300005341\|Ga0070691_10242243	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	964	Open in IMG/M
3300005364\|Ga0070673_101871536	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	569	Open in IMG/M
3300005366\|Ga0070659_100371747	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1203	Open in IMG/M
3300005367\|Ga0070667_101067324	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	754	Open in IMG/M
3300005436\|Ga0070713_100129921	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2220	Open in IMG/M
3300005437\|Ga0070710_10054988	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia	2247	Open in IMG/M
3300005438\|Ga0070701_10919761	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	605	Open in IMG/M
3300005439\|Ga0070711_100142450	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1799	Open in IMG/M
3300005439\|Ga0070711_100476306	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1025	Open in IMG/M
3300005439\|Ga0070711_101071203	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	694	Open in IMG/M
3300005439\|Ga0070711_101594790	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	571	Open in IMG/M
3300005719\|Ga0068861_100243853	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1530	Open in IMG/M
3300006041\|Ga0075023_100008680	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2584	Open in IMG/M
3300006047\|Ga0075024_100180349	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	979	Open in IMG/M
3300006048\|Ga0075363_100699847	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	612	Open in IMG/M
3300006050\|Ga0075028_100690294	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	614	Open in IMG/M
3300006050\|Ga0075028_100905480	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	543	Open in IMG/M
3300006057\|Ga0075026_100001636	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	9380	Open in IMG/M
3300006057\|Ga0075026_100156833	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1171	Open in IMG/M
3300006172\|Ga0075018_10047570	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1775	Open in IMG/M
3300006172\|Ga0075018_10766697	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	526	Open in IMG/M
3300006354\|Ga0075021_10546219	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	737	Open in IMG/M
3300006576\|Ga0074047_11929638	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	847	Open in IMG/M
3300006579\|Ga0074054_11691370	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	549	Open in IMG/M
3300006638\|Ga0075522_10000077	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	56156	Open in IMG/M
3300006950\|Ga0075524_10115208	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1154	Open in IMG/M
3300009053\|Ga0105095_10360698	Not Available	801	Open in IMG/M
3300009093\|Ga0105240_11642399	All Organisms → cellular organisms → Bacteria	672	Open in IMG/M
3300009153\|Ga0105094_10946910	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	510	Open in IMG/M
3300009167\|Ga0113563_12502211	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	623	Open in IMG/M
3300009545\|Ga0105237_10339285	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia	1507	Open in IMG/M
3300009684\|Ga0114958_10427728	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	639	Open in IMG/M
3300010360\|Ga0126372_12261571	Not Available	593	Open in IMG/M
3300010361\|Ga0126378_10952972	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	963	Open in IMG/M
3300010361\|Ga0126378_12102265	Not Available	644	Open in IMG/M
3300010362\|Ga0126377_11214840	Not Available	825	Open in IMG/M
3300010371\|Ga0134125_10172758	All Organisms → cellular organisms → Bacteria	2408	Open in IMG/M
3300010371\|Ga0134125_10287132	All Organisms → cellular organisms → Bacteria	1827	Open in IMG/M
3300010373\|Ga0134128_12172273	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	611	Open in IMG/M
3300010885\|Ga0133913_13256919	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1070	Open in IMG/M
3300011264\|Ga0151623_1313892	Not Available	611	Open in IMG/M
3300012004\|Ga0120134_1088147	Not Available	572	Open in IMG/M
3300012909\|Ga0157290_10277443	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	607	Open in IMG/M
3300012931\|Ga0153915_10403952	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1547	Open in IMG/M
3300012931\|Ga0153915_12137219	Not Available	655	Open in IMG/M
3300012940\|Ga0164243_10032540	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6474	Open in IMG/M
3300012942\|Ga0164242_10460404	Not Available	919	Open in IMG/M
3300012943\|Ga0164241_11409431	Not Available	513	Open in IMG/M
3300012964\|Ga0153916_10494646	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1293	Open in IMG/M
3300012971\|Ga0126369_10517751	Not Available	1253	Open in IMG/M
3300015360\|Ga0163144_10750966	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462	1000	Open in IMG/M
3300015371\|Ga0132258_13400161	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1093	Open in IMG/M
3300017652\|Ga0182746_1006924	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6303	Open in IMG/M
3300017930\|Ga0187825_10121799	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Rikenellaceae → Alistipes → environmental samples → Alistipes finegoldii CAG:68	911	Open in IMG/M
3300017937\|Ga0187809_10008001	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae	3674	Open in IMG/M
3300017944\|Ga0187786_10394380	Not Available	599	Open in IMG/M
3300017944\|Ga0187786_10477785	Not Available	560	Open in IMG/M
3300017947\|Ga0187785_10036633	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	1795	Open in IMG/M
3300017947\|Ga0187785_10142091	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1000	Open in IMG/M
3300017959\|Ga0187779_10000179	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462	46590	Open in IMG/M
3300017973\|Ga0187780_10106479	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1932	Open in IMG/M
3300017973\|Ga0187780_10849058	Not Available	662	Open in IMG/M
3300017974\|Ga0187777_10414403	Not Available	933	Open in IMG/M
3300018060\|Ga0187765_10858748	Not Available	611	Open in IMG/M
3300020157\|Ga0194049_1167261	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	597	Open in IMG/M
3300021478\|Ga0210402_10071422	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3072	Open in IMG/M
3300021519\|Ga0194048_10057192	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1558	Open in IMG/M
3300021602\|Ga0194060_10352685	Not Available	715	Open in IMG/M
3300025509\|Ga0208848_1040468	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Rikenellaceae → Alistipes → environmental samples → Alistipes finegoldii CAG:68	1005	Open in IMG/M
3300025679\|Ga0207933_1002361	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462	12345	Open in IMG/M
3300025909\|Ga0207705_10133861	All Organisms → cellular organisms → Bacteria	1846	Open in IMG/M
3300025916\|Ga0207663_10136274	Not Available	1704	Open in IMG/M
3300025916\|Ga0207663_11557171	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	532	Open in IMG/M
3300025920\|Ga0207649_10106594	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1864	Open in IMG/M
3300025921\|Ga0207652_10897326	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Rikenellaceae → Alistipes → environmental samples → Alistipes finegoldii CAG:68	783	Open in IMG/M
3300025921\|Ga0207652_11490275	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	580	Open in IMG/M
3300025922\|Ga0207646_10244810	All Organisms → cellular organisms → Bacteria	1620	Open in IMG/M
3300025928\|Ga0207700_10514402	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Rikenellaceae → Alistipes → environmental samples → Alistipes finegoldii CAG:68	1060	Open in IMG/M
3300025939\|Ga0207665_10272325	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Rikenellaceae → Alistipes → environmental samples → Alistipes finegoldii CAG:68	1258	Open in IMG/M
3300025981\|Ga0207640_12059803	Not Available	517	Open in IMG/M
3300026372\|Ga0256804_1019151	Not Available	655	Open in IMG/M
3300026452\|Ga0256821_1000270	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3548	Open in IMG/M
3300026711\|Ga0207489_102094	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	504	Open in IMG/M
3300026751\|Ga0207594_102552	All Organisms → cellular organisms → Bacteria	748	Open in IMG/M
3300026900\|Ga0207444_1016288	Not Available	524	Open in IMG/M
3300027456\|Ga0207482_104026	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → malvids → Malvales → Malvaceae → Malvoideae → Gossypium → Gossypium hirsutum	621	Open in IMG/M
3300027460\|Ga0207506_1016582	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → malvids → Malvales → Malvaceae → Malvoideae → Gossypium → Gossypium hirsutum	570	Open in IMG/M
3300027543\|Ga0209999_1044767	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Rikenellaceae → Alistipes → environmental samples → Alistipes finegoldii CAG:68	832	Open in IMG/M
3300027560\|Ga0207981_1085356	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	581	Open in IMG/M
3300027717\|Ga0209998_10001282	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6148	Open in IMG/M
3300027731\|Ga0209592_1298885	Not Available	551	Open in IMG/M
3300027874\|Ga0209465_10607714	Not Available	541	Open in IMG/M
3300027910\|Ga0209583_10006098	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3440	Open in IMG/M
3300027915\|Ga0209069_10342195	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia	805	Open in IMG/M
3300028791\|Ga0307290_10013668	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2769	Open in IMG/M
3300028800\|Ga0265338_10445495	All Organisms → cellular organisms → Bacteria	917	Open in IMG/M
3300028802\|Ga0307503_10412516	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Rikenellaceae → Alistipes → environmental samples → Alistipes finegoldii CAG:68	708	Open in IMG/M
3300029987\|Ga0311334_11003766	Not Available	694	Open in IMG/M
3300031122\|Ga0170822_11231905	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1136	Open in IMG/M
3300031235\|Ga0265330_10152823	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	981	Open in IMG/M
3300031238\|Ga0265332_10183737	Not Available	871	Open in IMG/M
3300031241\|Ga0265325_10000141	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462	50291	Open in IMG/M
3300031241\|Ga0265325_10066127	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1824	Open in IMG/M
3300031247\|Ga0265340_10064334	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1748	Open in IMG/M
3300031595\|Ga0265313_10024494	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3222	Open in IMG/M
3300031938\|Ga0308175_101409776	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	777	Open in IMG/M
3300032770\|Ga0335085_10108257	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3575	Open in IMG/M
3300032782\|Ga0335082_10075162	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3410	Open in IMG/M
3300032829\|Ga0335070_10212887	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1917	Open in IMG/M
3300032829\|Ga0335070_10379070	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1357	Open in IMG/M
3300032893\|Ga0335069_11396139	Not Available	758	Open in IMG/M
3300033004\|Ga0335084_12373835	Not Available	511	Open in IMG/M
3300033158\|Ga0335077_10707077	All Organisms → cellular organisms → Bacteria	1037	Open in IMG/M
3300033433\|Ga0326726_11216279	Not Available	733	Open in IMG/M
3300033433\|Ga0326726_11704834	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	614	Open in IMG/M
3300033513\|Ga0316628_103361054	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	580	Open in IMG/M
3300034127\|Ga0370489_0095167	Not Available	868	Open in IMG/M
3300034169\|Ga0370480_0051415	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1436	Open in IMG/M
3300034820\|Ga0373959_0024305	All Organisms → cellular organisms → Bacteria	1183	Open in IMG/M
3300034820\|Ga0373959_0224570	Not Available	505	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	81.20%
Host-Associated	Host-Associated	18.80%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	58.65%
Aquatic	Environmental → Aquatic	22.56%
Plants	Host-Associated → Plants	18.80%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	56.39%
Freshwater	Environmental → Aquatic → Freshwater	13.53%
Rhizosphere	Host-Associated → Plants → Rhizosphere	13.53%
Sediment	Environmental → Aquatic → Sediment	8.27%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.51%
Peat	Environmental → Terrestrial → Peat	2.26%
Marine	Environmental → Aquatic → Marine	0.75%
Roots	Host-Associated → Plants → Roots	0.75%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	25.56%
Loam	Environmental → Terrestrial → Soil → Loam	15.79%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	15.04%
Soil	Host-Associated → Plants → Rhizosphere → Soil	11.28%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	8.27%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	6.02%
Lake	Environmental → Aquatic → Freshwater → Lake	4.51%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.01%
Sediment	Environmental → Aquatic → Freshwater → Sediment	2.26%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	2.26%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.26%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.50%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.75%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.75%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	0.75%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	15.04%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	14.29%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	12.03%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	11.28%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	8.27%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	4.51%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	4.51%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	3.76%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.76%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	3.01%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	3.01%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.01%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	2.26%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	2.26%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.26%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.50%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.50%
Acid Mine Drainage	Environmental → Aquatic → Freshwater → Groundwater → Acid Mine Drainage	0.75%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.75%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.75%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.75%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	0.75%

Habitat	Taxonomy	Distribution
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	9.77%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	8.27%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	6.77%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	6.77%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	5.26%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	4.51%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.01%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.01%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	3.01%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.01%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	3.01%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	2.26%
Anoxic Zone Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Anoxic Zone Freshwater	2.26%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	2.26%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.26%
Compost	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Compost	2.26%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.26%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	1.50%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Sediment	1.50%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.50%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	1.50%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.50%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	1.50%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	1.50%
Rhizosphere Soil	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil	1.50%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.50%
Freshwater Microbial Mat	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Microbial Mat	0.75%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.75%
Sediment	Environmental → Aquatic → Freshwater → Groundwater → Acid Mine Drainage → Sediment	0.75%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.75%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	0.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.75%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.75%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.75%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.75%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	0.75%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.75%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.75%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.75%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.75%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	0.75%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000890	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300003996	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailB_D2	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005168	Soil and rhizosphere microbial communities from Laval, Canada - mgLPC	Environmental	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005327	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG	Host-Associated	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300006041	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014	Environmental	Open in IMG/M
3300006047	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013	Environmental	Open in IMG/M
3300006048	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3	Host-Associated	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006057	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2012	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006354	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012	Environmental	Open in IMG/M
3300006576	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006579	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006638	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostL2-A	Environmental	Open in IMG/M
3300006950	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE Permafrost154B-one	Environmental	Open in IMG/M
3300009053	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009153	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 10-12cm March2015	Environmental	Open in IMG/M
3300009167	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG - Illumina Assembly (version 2)	Environmental	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009684	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130208_EF_MetaG	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010885	northern Canada Lakes Co-assembly	Environmental	Open in IMG/M
3300011264	Acid mine drainage microbial communities from Malanjkhand copper mine, India - M16 k-mer 63	Environmental	Open in IMG/M
3300012004	Permafrost microbial communities from Nunavut, Canada - A30_5cm_6M	Environmental	Open in IMG/M
3300012909	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S149-409B-1	Environmental	Open in IMG/M
3300012931	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaG	Environmental	Open in IMG/M
3300012940	Organic Plus compost microbial communities from Emeryville, California, USA - Original compost - Organic plus compost (OP)	Environmental	Open in IMG/M
3300012942	Miracle-Growth compost microbial communities from Emeryville, California, USA - Original compost - Miracle growth compost (MG)	Environmental	Open in IMG/M
3300012943	Backyard soil microbial communities from Emeryville, California, USA - Original compost - Back yard soil (BY)	Environmental	Open in IMG/M
3300012964	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 4 metaG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300015360	Freshwater microbial mat bacterial communities from Lake Vanda, McMurdo Dry Valleys, Antarctica - Oligotrophic Lake LV.19.BULKMAT1	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300017652	Enriched Organic Plus compost microbial communities from Emeryville, California, USA - eDNA 3rd pass 30_C BE-Lig OP (version 2)	Environmental	Open in IMG/M
3300017930	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_5	Environmental	Open in IMG/M
3300017937	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_4	Environmental	Open in IMG/M
3300017944	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_10_20_MG	Environmental	Open in IMG/M
3300017947	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_4_20_MG	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300020157	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Jun2016-L224-25m	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021519	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Jun2016-L222-5m	Environmental	Open in IMG/M
3300021602	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Sep2016-L222-5m	Environmental	Open in IMG/M
3300025509	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-1 shallow-072012 (SPAdes)	Environmental	Open in IMG/M
3300025679	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-3 deep-092012 (SPAdes)	Environmental	Open in IMG/M
3300025909	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026372	Sediment microbial communities from tidal freshwater marsh on Altamaha River, Georgia, United States - 10-16 F5	Environmental	Open in IMG/M
3300026452	Sediment microbial communities from tidal freshwater marsh on Altamaha River, Georgia, United States - 7-17 PU4	Environmental	Open in IMG/M
3300026711	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G09A2-10 (SPAdes)	Environmental	Open in IMG/M
3300026751	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G05A2w-12 (SPAdes)	Environmental	Open in IMG/M
3300026900	Soil microbial communities from Kellog Biological Station, Michigan, USA - Nitrogen cycling UWRJ-G01K4-12 (SPAdes)	Environmental	Open in IMG/M
3300027456	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-ROWE17-E (SPAdes)	Environmental	Open in IMG/M
3300027460	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-ROWE17-C (SPAdes)	Environmental	Open in IMG/M
3300027543	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 AM (SPAdes)	Host-Associated	Open in IMG/M
3300027560	Soil and rhizosphere microbial communities from Laval, Canada - mgLPC (SPAdes)	Environmental	Open in IMG/M
3300027717	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Endophyte Co-N S PM (SPAdes)	Host-Associated	Open in IMG/M
3300027731	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 19-21cm March2015 (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027910	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014 (SPAdes)	Environmental	Open in IMG/M
3300027915	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013 (SPAdes)	Environmental	Open in IMG/M
3300028791	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_144	Environmental	Open in IMG/M
3300028800	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG	Host-Associated	Open in IMG/M
3300028802	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 17_S	Environmental	Open in IMG/M
3300029987	I_Fen_E3 coassembly	Environmental	Open in IMG/M
3300031122	Oak Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031235	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG	Host-Associated	Open in IMG/M
3300031238	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG	Host-Associated	Open in IMG/M
3300031241	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG	Host-Associated	Open in IMG/M
3300031247	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG	Host-Associated	Open in IMG/M
3300031595	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG	Host-Associated	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032829	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M
3300033004	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M
3300033513	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D5_C	Environmental	Open in IMG/M
3300034127	Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_05D_16	Environmental	Open in IMG/M
3300034169	Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_02D_15	Environmental	Open in IMG/M
3300034820	Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_2	Host-Associated	Open in IMG/M

Geographical Distribution

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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.32
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.32
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F060311

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI11643J12802_121848191	3300000890	Soil	GVKGPPWRPFFFIRPFVVGGRMISYITVMVSKAQRIVLVDHARLPWRFFGRLTAAVQAGL
JGI12627J18819_102311801	3300001867	Forest Soil	VLRCARFVVETKPIGYIAAMVSRAQRIILADHARLPWRFFGRLTAVQAGL*
Ga0055467_100789742	3300003996	Natural And Restored Wetlands	LRARVLLIVADGPIGYITLMVSKVQRIILVDHARLPWRFFGRLTAVQAGL*
Ga0062595_1005231052	3300004479	Soil	VKGPLWRPFFFARPFVVGGSMIGYITVMVSKAQRIVLVDHARLPWRFFGRLTAAVQAGL*
Ga0066395_108943922	3300004633	Tropical Forest Soil	FSYLGFVVETHRIGYIPLMVSEAQRIVLVDHARLPWRFFGRLTAVQAGL*
Ga0066809_102197492	3300005168	Soil	MAFVVEPGSIGYITGMVSKAQRIVLVDHARLPWRFFGRLTAVQAGL*
Ga0065715_101130041	3300005293	Miscanthus Rhizosphere	PLWRPFFFARPFVVGGGMIGYITVMVSKAQRIVLVDHARLPWRFFGRLTAAVQAGL*
Ga0070658_103532662	3300005327	Corn Rhizosphere	WLLFIVAVEAIGYIGRMISKALRIVLADHARLPWRFFGRLTAVQAGL*
Ga0070690_1015971332	3300005330	Switchgrass Rhizosphere	LRLRNASRGRRSAPFSRLELGLPFVVEPGISGYINAMISKAHRIILSDHARLPWRFFGRLTAVQAGL*
Ga0066388_1000206122	3300005332	Tropical Forest Soil	MREGGRMRPLFLNRRFVVEAGSIGYIVVMISRAQRIILVDHARLPWRFFGRLTAVQAGL*
Ga0066388_1068199392	3300005332	Tropical Forest Soil	MGPFFFVGFVVETHRIGYIPLMVSEAQRIVLVDHARLPWRFFGRLTAVQAGL*
Ga0070691_102422432	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	MPAPFFIYAAFVVEPGPIGYIALMVSKAQRIVLVDHTRLPWRFFGRLTAVQAGL*
Ga0070673_1018715362	3300005364	Switchgrass Rhizosphere	FIYAAFVVEPGPIGYIALMVSKAQRILLVDHTRLPWRFFGRLTAVQAGL*
Ga0070659_1003717471	3300005366	Corn Rhizosphere	MPAPFFICAAFVVEPGPIGYIALMVSKAQRIVLVDHTRLPWRFFGRLTAVQAGL*
Ga0070667_1010673242	3300005367	Switchgrass Rhizosphere	MPAPFFICAAFVVETGPIGYIALMVSKAQRIVLVDHTRLPWRFFGRLTAVQAGL*
Ga0070713_1001299211	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	GRLPAPFFISGDFVVEAGSIGYITLMISRAQRIVLVDHALLPWRFFGRLTAVQAGL*
Ga0070710_100549882	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MPAPFFIYAAFVVEPGPIGYIALMVSKAQRILLVDHTRLPWRFFGRLTAVQAGL*
Ga0070701_109197612	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	GEEQRGRMPAPFFIYAAFVVEPGPIGYIALMVSKAQRIVLVDHTRLPWRFFGRLTAVQAGL*
Ga0070711_1001424503	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MRAAMQRRDAAFVVGTIPIDYIASMVSKAQRIILADHTRLPWRFFGRLTAVQAGL*
Ga0070711_1004763062	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MCAAFVVETGPIGYIALMVSKAQRIVLVDHTRLPWRFFGRLTAVQAGL*
Ga0070711_1010712031	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MKGPPVGPFFMSGDFVVEAGSIGYITLMVSKAQRIVLADHARLPWRFFGRLTAVQAGL*
Ga0070711_1015947902	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MKGPIAGPFFYSGDFVVEAGSIGYITLMISRAQRIVLVDHARLPWRFFGRLT
Ga0068861_1002438531	3300005719	Switchgrass Rhizosphere	MPAPFFICAAFVVETGPIGYIALMVSKAQRIVLVDHTRLPWRFFGRLTAVQAG
Ga0075023_1000086803	3300006041	Watersheds	MGLPFIVETAAIGYIASMVSRAQRIVLVDHTRLPWRFFGRLTAVQAGL*
Ga0075024_1001803492	3300006047	Watersheds	MSAPFSWTPFIVETTAIGYITSMVSKAQRIVLVDHARLPWRFFGRLTAVQAGL*
Ga0075363_1006998471	3300006048	Populus Endosphere	RPLFVVRVPRYIVLMASKRIILADHKRLPARFFGRLTAVQVGL*
Ga0075028_1006902942	3300006050	Watersheds	MDLPFIVETAAIGYIASMVSRAQRIVLADHARLPWRFFGRLTAVQAGL*
Ga0075028_1009054802	3300006050	Watersheds	MKGPFIGPFFMFAGFVVEAGSIGYITRMVSKAQRIVLVDHARLPWRFFGRLTAVQAGL*
Ga0075026_1000016364	3300006057	Watersheds	MGLPFIVETAAIGYIASMVSRAQRIVLVDHRRLPWRFFGRLTAVQAGL*
Ga0075026_1001568332	3300006057	Watersheds	MSAPFSWAPFIVETTAIGYITSMVSKAQRIVLVDHARLPWRFFGRLTAVQAGL*
Ga0075018_100475702	3300006172	Watersheds	MDLPFIVETAAIGYIASMVSRAQRIVLVDHRRLPWRFFGRLTAVQAGL*
Ga0075018_107666972	3300006172	Watersheds	AFVVETGPIGYIALMVSKAQRIVLVDHTRLPWRFFGRLTAVQAGL*
Ga0075021_105462191	3300006354	Watersheds	MKGPHVGPFFIRTAFVVGSEPIGYITGMVSQAQRIVLADHTRLPWRFFGRLTAVQAGL
Ga0074047_119296382	3300006576	Soil	VWMAFVVEPGSIGYITGMVSKAQRIVLVDHARLPWRFFGRLTAVQAGL*
Ga0074054_116913701	3300006579	Soil	GRMSAPFFMCAAFVVETGPIGYIALMVSKAQRIVLVDHTRLPWRFFGRLTAVQAGL*
Ga0075522_100000779	3300006638	Arctic Peat Soil	LLWRYAATFVVEAGISGYIAIMISKARRIILADHARLPWRFFGRLTAVQAGL*
Ga0075524_101152082	3300006950	Arctic Peat Soil	GAGIRFIVGAGSIGYISPMVSKARRIILSDHTRLPWRFFGRLTAVQAGL*
Ga0105095_103606982	3300009053	Freshwater Sediment	SPAPQCMKGPYTGPFFISGAFVVEAGSISYIPPMVSKAQRIILVDHARLPWRFFGRLTAVQAGL*
Ga0105240_109127172	3300009093	Corn Rhizosphere	VVEPGPIGYIALMVSKAQRIVLVDHTRLPWRFFGRLTAVQAGL*
Ga0105240_116423992	3300009093	Corn Rhizosphere	LGGGFVVEARPIGYIPAMISETQRIVLVDHARLPWRFFGRLTAVQAGL*
Ga0105094_109469102	3300009153	Freshwater Sediment	MKGPYTGPFFISGAFVVEAGSISYIPPMVSKAQRIILVDHARLPWRFFGRLTAVQAGL*
Ga0113563_125022112	3300009167	Freshwater Wetlands	GLLTPHTAFVVGTIPIDYIAAMVSKACRIILADHTRLPWRFFGRLTAVQAGL*
Ga0105237_103392853	3300009545	Corn Rhizosphere	LGGGFVVEARPIGYIQAMISETQRIVLVDHARLPWRFFGRLTAVQAGL*
Ga0114958_104277281	3300009684	Freshwater Lake	EAGRRRIPFVVGTIPIDYIASMVSKACRIILADHTRLPWRFFGRLTAVQAGL*
Ga0126372_122615711	3300010360	Tropical Forest Soil	PKVPKRVRANKITAIRGTKKGPHAGPLFSCVRFVVETRRIGYIPFMISKAQRIVLVDHARLPWRFFGRLTAVQSGL*
Ga0126378_109529722	3300010361	Tropical Forest Soil	LAHFLDGGFVVGTESIGYITIMVSKAQRIILVDHARLPWRFFGRLTAVQAGL*
Ga0126378_121022651	3300010361	Tropical Forest Soil	VRFVVETPRIGYIPIMISKAQRIVLVDHARLPCRFFGRLTA
Ga0126377_112148401	3300010362	Tropical Forest Soil	MRPLFLNRRFVVEAGSIGYIVVMISRAQRIILVDHARLPWRFFGRLTAVQAGL*
Ga0134125_101727581	3300010371	Terrestrial Soil	AAFVVETGPIGYIALMVSKAQRIVLVDHTRLPWRFFGRLTAVQAGL*
Ga0134125_102871322	3300010371	Terrestrial Soil	VVETGPIGYIALMVSKAQRIVLVDHTRLPWRFFGRLTAVQAGL*
Ga0134128_121722731	3300010373	Terrestrial Soil	RLFVVARDATGYIGGMITKAHRIVLADHARLPWRFFGRLTAAVLAGL*
Ga0133913_132569192	3300010885	Freshwater Lake	MRAGHAAFVVGTIPIDYIAAMVSKACRIILADHTRLPWRFFGRLTAVQAGL*
Ga0151623_13138922	3300011264	Sediment	AEKGPAFGPFFFSRPSGYIAPMVSKAQRIILADHTRLPWRFFGRLTAVQAVL*
Ga0120134_10881472	3300012004	Permafrost	IPECMKGPPSGPFFFGDAFVVGSGSNGYITPMVFKAQQIILCDHARLPWRFFGRLTAVQAGL*
Ga0157290_102774432	3300012909	Soil	VKGPQWRPFFFARLFVVGGTMIGYITIMVSKAQRIVLVDHARLPWRFFGRLTAAVQAGL*
Ga0153915_104039522	3300012931	Freshwater Wetlands	MQSMKGPLAGPFCIFAGFIVEAGSIGYITRMVSKAQRIVLVDHTRLPWRFFGRLTAVQAGL*
Ga0153915_121372192	3300012931	Freshwater Wetlands	MKGPAFGPFFVFVVEGSASRYTTPMVSKAQRIILCDHARLPWRFFGRLTAVQAGL*
Ga0164243_1003254010	3300012940	Compost	LIVARPAIGYIAAMLSRAQRIIIADHARLPWRFFGRLTAVQVGLRAGL*
Ga0164242_104604041	3300012942	Compost	AECPLFVVAPAPKVYISAMISKALRIVLADHARLPWRFFGRLTAVQAGL*
Ga0164241_114094312	3300012943	Soil	MQNRAAGFVVGMIPIDYIAAMVSKAQRIILADHTRLPWRFFGRLTAVQAGL*
Ga0153916_104946461	3300012964	Freshwater Wetlands	MKGPAFGPFFVFVVEAGTSGYISAMVSKAQRIILCDHARLPWRFFGRLTA
Ga0126369_105177511	3300012971	Tropical Forest Soil	GPKKGAGCRAPFSYVRFVVETPRIGYIPTMISKAQRIVLVDHARLPCRFFGRLTAVQAGL
Ga0163144_107509662	3300015360	Freshwater Microbial Mat	MRGLLTPHAAFVVGTIPIDYIAAMVSKACRIILADHTRLPWRFFGRLTAVQAGL*
Ga0132258_134001612	3300015371	Arabidopsis Rhizosphere	LPAFVVGGRTIGYITGMVSKAQRIVLVDHARLPWRFFGRLTAAVQAGL*
Ga0182746_10069245	3300017652	Compost	LIVARPAIGYIAAMLSRAQRIIIADHARLPWRFFGRLTAVQVGLRAGL
Ga0187825_101217991	3300017930	Freshwater Sediment	LGGGFVVEARPIGYIPAMISETQRIVLVDHARLPWRFFGRLTAVQAGL
Ga0187809_100080012	3300017937	Freshwater Sediment	LRRSAAGRAQFVVAPAAKVYIGRMMSKALRIVLADHARLPWRFFGRLTAVQAGL
Ga0187786_103943801	3300017944	Tropical Peatland	RVQSIADQRAACRPFLIRPFIVGPGPIGYISAMVSKAQRIILVDHARLPWRFFGRLTAVQAGL
Ga0187786_104777852	3300017944	Tropical Peatland	AGRKTQSMKGPLAGPFFIFGGFVVEAASIGYITLMVSKAQRIVLVDHARLPWRFFGRLTAVQAGL
Ga0187785_100366331	3300017947	Tropical Peatland	MAGGFVVEAGSIGYITPMISKAQRIVLVDHARLPWRFFGRLTAVQAGL
Ga0187785_101420913	3300017947	Tropical Peatland	MKGPLAGPFFTSGEFVVEARPIGYITIMVSKAQRIVLVDHARLPWRFFGRLTAVQAGL
Ga0187779_1000017922	3300017959	Tropical Peatland	MRGPSLLRAFVVGTGPIGYINPMIARTRRIILVDHARLPWRFFGRLTSVQAGL
Ga0187780_101064792	3300017973	Tropical Peatland	MKGPLAGPFFMAGEFVVEGRSIGYITLMVSKAQRIVLVDHARLPWRFFGRLTAVQAGL
Ga0187780_108490583	3300017973	Tropical Peatland	MRKEGPHAAPFSYPEFVVEAGLIGYISGMVSEAQRIVLVDHARLPWRFFGRL
Ga0187777_104144033	3300017974	Tropical Peatland	MRKEGPHAAPFSYPEFVVEAGLIGYISGMVSEAQRIVLVDHARLPWRFFGRLTAVQAGL
Ga0187765_108587481	3300018060	Tropical Peatland	MHAAFVVGSGPIGYIPAMVSKAQRIILVDHARLPWRFFGRLTAVQAGL
Ga0194049_11672612	3300020157	Anoxic Zone Freshwater	MRAGHAAFVVGTIPIDYIAAMVSKACRIILADHTRLPWRFFGRLTAVQAGL
Ga0210402_100714222	3300021478	Soil	MCAAFVVETGPIGYIALMVSKAQRIVLVDHTRLPWRFFGRLTAVQAGL
Ga0194048_100571922	3300021519	Anoxic Zone Freshwater	MRAGHAAFVVGTIPIDYIAAMVSKACRIILGDHTRLPWRFFGRLTAVQAGL
Ga0194060_103526851	3300021602	Anoxic Zone Freshwater	MRAGHAAFVVGTIPIDYIAAMVSKACRIILADHTRLPWRFFGRLTAVQAG
Ga0208848_10404682	3300025509	Arctic Peat Soil	MTCSEGPPSGPFFFGFAFIVGTGPNGYITAMVFKAQQIILCDHARLPWRFFGRLTAVQAG
Ga0207933_10023614	3300025679	Arctic Peat Soil	LLWRYAATFVVEAGISGYIAIMISKARRIILADHARLPWRFFGRLTAVQAGL
Ga0207705_101338611	3300025909	Corn Rhizosphere	RLRRSEAKWLLFIVAVEAIGYIGRMISKALRIVLADHARLPWRFFGRLTAVQAGL
Ga0207663_101362742	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MQRRDAAFVVGTIPIDYIASMVSKAQRIILADHTRLPWRFFGRLTAVQAGL
Ga0207663_115571711	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	ISGRKRGRMSAPFFMCAAFVVETGPIGYIALMVSKAQRIVLVDHTRLPWRFFGRLTAVQAGL
Ga0207649_101065944	3300025920	Corn Rhizosphere	MPAPFFIYAAFVVEPGPIGYIALMVSKAQRILLVDHTRLPWRFFGRLTAVQAGL
Ga0207652_108973262	3300025921	Corn Rhizosphere	FFARLFVVGGRMIGYITVMVSKAQRIVLVDHARLPWRFFGRLTAAVQAGL
Ga0207652_114902752	3300025921	Corn Rhizosphere	MRAAMQRRDAAFVVGTIPIDYIASMVSKAQRIILADHTRLPWRFFGRLTAVQAGL
Ga0207646_102448102	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MPAPFFIYAAFVVEPGPIGYIALMVSKAQRIVLVDHTRLPWRFFGRLTAVQAGL
Ga0207700_105144021	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	AAFVVETRPIGYIALMVSKAQRIVLVDHTRLPWRFFGRLTAVQAGL
Ga0207665_102723252	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	ICAAFVVETGPIGYIALMVSKAQRIVLVDHTRLPWRFFGRLTAVQAGL
Ga0207640_120598032	3300025981	Corn Rhizosphere	PFFIYAAFVVEPGPIGYIALMVSKAQRILLVDHTRLPWRFFGRLTAVQAGL
Ga0256804_10191511	3300026372	Sediment	MKGPLTGPFFMFADFVVQARSIGYITRMVSKAQRIVLVDHARLPWRFFGRLTAVQAGL
Ga0256821_10002701	3300026452	Sediment	LFMRGACVVEVGLIGYIARMVSSAQPIVMVDHLRLPWRFFGRMTAVQAGL
Ga0207489_1020942	3300026711	Soil	PLRRPFFFARPFVVGGRMIDYITDMVSKAQRIVLVDHARLPWRFFGRLTAVQAGL
Ga0207594_1025521	3300026751	Soil	FFFARPFVVGGSMIGYITVMVSKAQRIVLVDHARLPWRFFGRLTAVQAGL
Ga0207444_10162882	3300026900	Soil	FVVGGRMIDYITDMVSKAQRIVLVDHARLPWRFFGRLTAVQAGL
Ga0207482_1040262	3300027456	Soil	PLFLGRRFVVEPKSIGYIPVMVLTAQRIVLADHARLPWRFFGRLTAVQAGL
Ga0207506_10165822	3300027460	Soil	FLGRRFVVEPKSIGYIPVMVLRAQRIVLADHARLPWRFFGRLTAVQAGL
Ga0209999_10447672	3300027543	Arabidopsis Thaliana Rhizosphere	FLCPPFVVRGRMIGYITDMVSKARRIVLVDHARLPWRFFGRLTAAVQAGL
Ga0207981_10853562	3300027560	Soil	MAFVVEPGSIGYITGMVSKAQRIVLVDHARLPWRFFGRLTAVQAGL
Ga0209998_100012821	3300027717	Arabidopsis Thaliana Rhizosphere	GQRVIFRLFGVKGPLRRPFFFARPFVVGGRMIDYITDMVSKAQRIVLVDHARLPWRFFGRLTAVQAGL
Ga0209592_12988852	3300027731	Freshwater Sediment	FVVEAGSISYIPPMVSKAQRIILVDHARLPWRFFGRLTAVQAGL
Ga0209465_106077141	3300027874	Tropical Forest Soil	FSYLGFVVETHRIGYIPLMVSEAQRIVLVDHARLPWRFFGRLTAVQAGL
Ga0209583_100060983	3300027910	Watersheds	MGLPFIVETAAIGYIASMVSRAQRIVLVDHTRLPWRFFGRLTAVQAGL
Ga0209069_103421952	3300027915	Watersheds	MSAPFSWAPFIVETTAIGYITSMVSKAQRIVLVDHARLPWRFFGRLTAVQAGL
Ga0307290_100136685	3300028791	Soil	PPRRNSASELQTCIKGPPRGPFFPGRRFVVEPGPIGYIAAMVFRAQRIVLADHALLPWRFFGRLTAVQAGL
Ga0265338_104454952	3300028800	Rhizosphere	FFLGASFVVGTGLNGYIAGMVSEAQRVTLSDHARLPWRFFGRLTAVQAGL
Ga0307503_104125162	3300028802	Soil	MSAPFFMCAAFVVETGPIGYIALMVSKAQRIVLVDHTRLPWRFFGRLTAVQAGL
Ga0311334_110037661	3300029987	Fen	MAFIVLPGSRVYIAAMVSKAHRIILSDHARLPWRFFGRL
Ga0170822_112319053	3300031122	Forest Soil	MSAPFFMCAAFVVETGPIGYIALMVSKAQRIVLVDRTRLPWRFFGRLTAVQAGL
Ga0265330_101528231	3300031235	Rhizosphere	MCAAMQRRGAAFVVGTIPIDYIASMVSKAQRIILADHTRLPWRFFGRLTAVQAGL
Ga0265332_101837372	3300031238	Rhizosphere	PFFMAATHLPFIVEARARGYITDMVSKAQRIILCDHARLPWRFFGRLTAVQAGL
Ga0265325_1000014144	3300031241	Rhizosphere	MPVTKGPLVGPFFIFARFIVEAETIGYITRMISGAQRIVLVDHARLPWRFFGRLTAVQAG
Ga0265325_100661272	3300031241	Rhizosphere	MRAGHAAFVVGTIAIDYIAAMVSKACRIILADHTRLPWRFFGRLTAVQAGL
Ga0265340_100643343	3300031247	Rhizosphere	MCAAMQRRDAAFVVGTIPIDYIASMVSKAQRIILADHTRLPWRFFGRLTAVQAGL
Ga0265313_100244946	3300031595	Rhizosphere	MPVTKGPLVGPFFIFARFIVEAETIGYITRMISRAQRIVLVDHARLPWRFFGRLTAVQAG
Ga0308175_1014097762	3300031938	Soil	MKGPLTGPFFISGAFVVEGGSIGYITSMISKAQRIVLADHARLPWRFFGRLTAVQAGL
Ga0335085_101082576	3300032770	Soil	MKGPLTGPFFMFADLVVQVRSIGYITRMVSKAQRIVLVDHARLPWRFFGRLTAVQAG
Ga0335082_100751621	3300032782	Soil	KGPLTGPFFMFADLVVQVRSIGYITRMVSKAQRIVLVDHARLPWRFFGRLTAVQAGL
Ga0335078_102516133	3300032805	Soil	MSYGSSGTTERGRRRGPFLFAGTKGYIALMVSRDQRIILADHARLPWRFFGRLTAVQAGL
Ga0335070_102128872	3300032829	Soil	MKGPLTGPFFMFADFVVQVRSIGYITRMVSKAQRIVLVDHARLPWRFFGRLTAVQAGL
Ga0335070_103790702	3300032829	Soil	MRKGGRTRPLFYICEFVVEVGLIGYITNMVSEAQRIVLADHARLPWRFFGRLTAVQAGL
Ga0335069_113961392	3300032893	Soil	MRKEGPHAAPFSYPEFVVEAGSIGYISAMVSEAQRIVLVDHARLPWRFFGRLTAVQAGL
Ga0335084_123738352	3300033004	Soil	FFMFADLVVQVRSIGYITRMVSKAQRIVLVDHARLPWRFFGRLTAVQAGL
Ga0335077_107070771	3300033158	Soil	VKGPLIGPFFIFGEFVVEARSIGYITVMVSKAQRIVLVDHARLPWRFFGRLTAVQAGL
Ga0326726_112162792	3300033433	Peat Soil	MSGDFVVEAGSIGYITPMVSKAQRIVLVDHARLPWRFFGRLTAVQAGL
Ga0326726_117048342	3300033433	Peat Soil	MKGPLTGPFFMFADFVVEARSIGYITRMVSKAQRIVLVDHARLPWRFFGRLTAVQAGL
Ga0316628_1033610542	3300033513	Soil	LRRSAAECRVFVVAPAPKVYIGRMISKALRIVLADHARLPWRFFGRLTAVQAGL
Ga0370489_0095167_644_799	3300034127	Untreated Peat Soil	MSAPRAAFVVGTIPIDYIAAMVSKAQRIILADHTRLPWRFFGRLTAVQAGL
Ga0370480_0051415_512_676	3300034169	Untreated Peat Soil	MRGLLTPHAAFVVGTIPIDYIASMVSKACRIILADHTRLPWRFFGRLTAVQAGL
Ga0373959_0024305_1006_1182	3300034820	Rhizosphere Soil	VKGPLRRPFFFARPFVVGGRMIDYITDMVSKAQRIVLVDHARLPWRFFGRLTAVQAGL
Ga0373959_0224570_2_139	3300034820	Rhizosphere Soil	AFVVETGPIGYIALMVSKAQRIVLVDHTRLPWRFFGRLTAVQAGL

Hidden Markov Model


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