Metagenome / Metatranscriptome Family F060293

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F060293
Family Type	Metagenome / Metatranscriptome
Number of Sequences	133
Average Sequence Length	76 residues
Representative Sequence	MTTQFDDVVKDAKRSAKEEIAEYLKRQNGSSTVIDKLIKAVSDIHQNKQLDEPTIQELLVLLSCIERLSDDLLAWAKTP
Number of Associated Samples	95
Number of Associated Scaffolds	133

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	77.44 %
% of genes near scaffold ends (potentially truncated)	35.34 %
% of genes from short scaffolds (< 2000 bps)	91.73 %
Associated GOLD sequencing projects	85
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (64.662 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (31.579 % of family members)
Environment Ontology (ENVO)	Unclassified (51.128 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (60.150 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 79.75% β-sheet: 0.00% Coil/Unstructured: 20.25%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 133 Family Scaffolds
PF00582	Usp	11.28
PF03061	4HBT	6.77
PF01068	DNA_ligase_A_M	3.01
PF13545	HTH_Crp_2	2.26
PF00571	CBS	2.26
PF13742	tRNA_anti_2	0.75
PF09361	Phasin_2	0.75
PF00027	cNMP_binding	0.75
PF03459	TOBE	0.75
PF13442	Cytochrome_CBB3	0.75
PF13333	rve_2	0.75
PF00034	Cytochrom_C	0.75
PF01471	PG_binding_1	0.75
PF00589	Phage_integrase	0.75
PF03358	FMN_red	0.75
PF00325	Crp	0.75
PF09994	DUF2235	0.75
PF00391	PEP-utilizers	0.75

COG ID	Name	Functional Category	% Frequency in 133 Family Scaffolds
COG1423	ATP-dependent RNA circularization protein, DNA/RNA ligase (PAB1020) family	Replication, recombination and repair [L]	3.01
COG1793	ATP-dependent DNA ligase	Replication, recombination and repair [L]	3.01

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	64.66 %
Unclassified	root	N/A	35.34 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	64.66 %
Unclassified	root	N/A	35.34 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	64.66 %
Unclassified	root	N/A	35.34 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	51.88 %
Unclassified	root	N/A	35.34 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	39.85 %
Unclassified	root	N/A	35.34 %

Name	Rank	Taxonomy	Distribution
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	36.84 %
Unclassified	root	N/A	35.34 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.34 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	33.08 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	1.50 %
Brucellaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Brucellaceae	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.34 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	24.81 %
Rhizobium/Agrobacterium group	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group	1.50 %
Brucella/Ochrobactrum group	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Brucellaceae → Brucella/Ochrobactrum group	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.34 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	3.01 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	2.26 %
Rhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium	1.50 %
Brucella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Brucellaceae → Brucella/Ochrobactrum group → Brucella	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.34 %
Bradyrhizobium sp. CCGUVB23	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. CCGUVB23	2.26 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	2.26 %
Bradyrhizobium sp. Ai1a-2	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Ai1a-2	0.75 %
Rhizobium leguminosarum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium leguminosarum	0.75 %
unclassified Rhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → unclassified Rhizobium	0.75 %
Brucella intermedia	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Brucellaceae → Brucella/Ochrobactrum group → Brucella → Brucella intermedia	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.34 %
Bradyrhizobium sp. CCGUVB23	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. CCGUVB23	2.26 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	2.26 %
Brucella intermedia 229E	strain	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Brucellaceae → Brucella/Ochrobactrum group → Brucella → Brucella intermedia → Brucella intermedia 229E	0.75 %
Rhizobium sp. R693	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → unclassified Rhizobium → Rhizobium sp. R693	0.75 %
Bradyrhizobium sp. Ai1a-2	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Ai1a-2	0.75 %
Rhizobium leguminosarum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium leguminosarum	0.75 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002568\|C688J35102_119076336	All Organisms → cellular organisms → Bacteria → Proteobacteria	634	Open in IMG/M
3300003505\|JGIcombinedJ51221_10176235	Not Available	866	Open in IMG/M
3300004114\|Ga0062593_101519910	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	722	Open in IMG/M
3300005434\|Ga0070709_10404654	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1020	Open in IMG/M
3300005764\|Ga0066903_100351753	Not Available	2382	Open in IMG/M
3300005764\|Ga0066903_104340625	All Organisms → cellular organisms → Bacteria	758	Open in IMG/M
3300005764\|Ga0066903_106794062	Not Available	594	Open in IMG/M
3300006050\|Ga0075028_100452533	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	743	Open in IMG/M
3300006173\|Ga0070716_100016475	All Organisms → cellular organisms → Bacteria	3815	Open in IMG/M
3300006173\|Ga0070716_100356251	Not Available	1037	Open in IMG/M
3300006173\|Ga0070716_101603272	Not Available	535	Open in IMG/M
3300006175\|Ga0070712_100766161	Not Available	826	Open in IMG/M
3300006354\|Ga0075021_11044986	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	534	Open in IMG/M
3300009551\|Ga0105238_12508227	Not Available	552	Open in IMG/M
3300010361\|Ga0126378_12331822	Not Available	611	Open in IMG/M
3300010366\|Ga0126379_12246508	Not Available	646	Open in IMG/M
3300010371\|Ga0134125_12276557	Not Available	589	Open in IMG/M
3300011120\|Ga0150983_14530321	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. CCGUVB23	790	Open in IMG/M
3300012951\|Ga0164300_10331781	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	809	Open in IMG/M
3300012955\|Ga0164298_10302517	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Brucellaceae → Brucella/Ochrobactrum group → Brucella → Brucella intermedia → Brucella intermedia 229E	991	Open in IMG/M
3300012957\|Ga0164303_10378130	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	866	Open in IMG/M
3300012957\|Ga0164303_10937901	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. CCGUVB23	610	Open in IMG/M
3300012958\|Ga0164299_10280897	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1012	Open in IMG/M
3300012971\|Ga0126369_10652471	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1126	Open in IMG/M
3300012984\|Ga0164309_10862238	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. CCGUVB23	735	Open in IMG/M
3300012986\|Ga0164304_10814890	Not Available	722	Open in IMG/M
3300015371\|Ga0132258_12600083	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1265	Open in IMG/M
3300015374\|Ga0132255_102569049	All Organisms → cellular organisms → Bacteria	778	Open in IMG/M
3300016270\|Ga0182036_10770407	All Organisms → cellular organisms → Bacteria	782	Open in IMG/M
3300016270\|Ga0182036_11886580	Not Available	507	Open in IMG/M
3300016294\|Ga0182041_10439466	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1119	Open in IMG/M
3300016294\|Ga0182041_11324496	Not Available	659	Open in IMG/M
3300016319\|Ga0182033_10469517	All Organisms → cellular organisms → Bacteria → Proteobacteria	1076	Open in IMG/M
3300016319\|Ga0182033_10947191	Not Available	764	Open in IMG/M
3300016341\|Ga0182035_12028125	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	523	Open in IMG/M
3300016341\|Ga0182035_12035849	Not Available	522	Open in IMG/M
3300016357\|Ga0182032_10108671	All Organisms → cellular organisms → Bacteria	1975	Open in IMG/M
3300016357\|Ga0182032_11152720	Not Available	666	Open in IMG/M
3300016371\|Ga0182034_10366261	All Organisms → cellular organisms → Bacteria → Proteobacteria	1174	Open in IMG/M
3300016371\|Ga0182034_10457130	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1058	Open in IMG/M
3300016371\|Ga0182034_10557140	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	963	Open in IMG/M
3300016387\|Ga0182040_11344449	Not Available	604	Open in IMG/M
3300016404\|Ga0182037_10403579	All Organisms → cellular organisms → Bacteria → Proteobacteria	1127	Open in IMG/M
3300016404\|Ga0182037_11078925	Not Available	702	Open in IMG/M
3300016422\|Ga0182039_10412232	All Organisms → cellular organisms → Bacteria	1149	Open in IMG/M
3300016445\|Ga0182038_11593456	Not Available	587	Open in IMG/M
3300016445\|Ga0182038_12197446	Not Available	500	Open in IMG/M
3300017947\|Ga0187785_10056772	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1480	Open in IMG/M
3300017947\|Ga0187785_10112691	All Organisms → cellular organisms → Bacteria → Proteobacteria	1102	Open in IMG/M
3300017974\|Ga0187777_10168309	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1468	Open in IMG/M
3300020579\|Ga0210407_10542966	Not Available	907	Open in IMG/M
3300020580\|Ga0210403_10009593	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	7920	Open in IMG/M
3300020583\|Ga0210401_10051939	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3868	Open in IMG/M
3300020583\|Ga0210401_10349373	Not Available	1340	Open in IMG/M
3300021405\|Ga0210387_10404583	Not Available	1209	Open in IMG/M
3300021405\|Ga0210387_11669912	Not Available	540	Open in IMG/M
3300021479\|Ga0210410_10088692	Not Available	2723	Open in IMG/M
3300022529\|Ga0242668_1056756	Not Available	712	Open in IMG/M
3300025927\|Ga0207687_11595767	All Organisms → cellular organisms → Bacteria	560	Open in IMG/M
3300025939\|Ga0207665_10475362	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	962	Open in IMG/M
3300026833\|Ga0207728_106813	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1110	Open in IMG/M
3300026835\|Ga0207782_106737	All Organisms → cellular organisms → Bacteria	991	Open in IMG/M
3300026868\|Ga0207818_1016270	Not Available	664	Open in IMG/M
3300026872\|Ga0207785_1010615	Not Available	834	Open in IMG/M
3300026879\|Ga0207763_1009613	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1021	Open in IMG/M
3300026887\|Ga0207805_1027386	Not Available	558	Open in IMG/M
3300026927\|Ga0207744_1019729	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	630	Open in IMG/M
3300026997\|Ga0207784_1012922	All Organisms → cellular organisms → Bacteria	893	Open in IMG/M
3300027010\|Ga0207839_1043057	Not Available	511	Open in IMG/M
3300027011\|Ga0207740_1006435	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1838	Open in IMG/M
3300027039\|Ga0207855_1034837	All Organisms → cellular organisms → Bacteria	680	Open in IMG/M
3300027042\|Ga0207766_1023831	Not Available	690	Open in IMG/M
3300027104\|Ga0208095_1006740	Not Available	788	Open in IMG/M
3300027313\|Ga0207780_1016210	All Organisms → cellular organisms → Bacteria	1451	Open in IMG/M
3300027516\|Ga0207761_1008313	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2405	Open in IMG/M
3300027703\|Ga0207862_1114407	All Organisms → cellular organisms → Bacteria	811	Open in IMG/M
3300030935\|Ga0075401_11075680	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	587	Open in IMG/M
3300031474\|Ga0170818_111453278	All Organisms → cellular organisms → Bacteria → Proteobacteria	1252	Open in IMG/M
3300031544\|Ga0318534_10446341	Not Available	741	Open in IMG/M
3300031545\|Ga0318541_10347292	All Organisms → cellular organisms → Bacteria → Proteobacteria	829	Open in IMG/M
3300031561\|Ga0318528_10742639	Not Available	525	Open in IMG/M
3300031573\|Ga0310915_10064425	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2399	Open in IMG/M
3300031573\|Ga0310915_10190713	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1431	Open in IMG/M
3300031573\|Ga0310915_10192990	All Organisms → cellular organisms → Bacteria → Proteobacteria	1422	Open in IMG/M
3300031573\|Ga0310915_10237519	Not Available	1281	Open in IMG/M
3300031573\|Ga0310915_10597226	Not Available	782	Open in IMG/M
3300031668\|Ga0318542_10297078	All Organisms → cellular organisms → Bacteria → Proteobacteria	826	Open in IMG/M
3300031718\|Ga0307474_10356567	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1133	Open in IMG/M
3300031736\|Ga0318501_10682696	Not Available	566	Open in IMG/M
3300031744\|Ga0306918_10991742	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	653	Open in IMG/M
3300031753\|Ga0307477_10571392	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	764	Open in IMG/M
3300031768\|Ga0318509_10588243	Not Available	620	Open in IMG/M
3300031820\|Ga0307473_11086184	Not Available	589	Open in IMG/M
3300031833\|Ga0310917_11053881	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	544	Open in IMG/M
3300031879\|Ga0306919_10167300	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1616	Open in IMG/M
3300031879\|Ga0306919_11194561	Not Available	578	Open in IMG/M
3300031890\|Ga0306925_10112862	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2902	Open in IMG/M
3300031890\|Ga0306925_10552132	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → unclassified Rhizobium → Rhizobium sp. R693	1221	Open in IMG/M
3300031890\|Ga0306925_10898290	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	911	Open in IMG/M
3300031910\|Ga0306923_10074442	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Ai1a-2	3797	Open in IMG/M
3300031910\|Ga0306923_10311138	All Organisms → cellular organisms → Bacteria → Proteobacteria	1799	Open in IMG/M
3300031910\|Ga0306923_12044246	All Organisms → cellular organisms → Bacteria	580	Open in IMG/M
3300031941\|Ga0310912_10135791	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1845	Open in IMG/M
3300031941\|Ga0310912_10710172	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	779	Open in IMG/M
3300031941\|Ga0310912_10986558	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	646	Open in IMG/M
3300031942\|Ga0310916_10822314	Not Available	781	Open in IMG/M
3300031942\|Ga0310916_10991179	Not Available	701	Open in IMG/M
3300031942\|Ga0310916_11132142	All Organisms → cellular organisms → Bacteria → Proteobacteria	649	Open in IMG/M
3300031942\|Ga0310916_11266202	Not Available	608	Open in IMG/M
3300031947\|Ga0310909_10016618	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	5201	Open in IMG/M
3300031947\|Ga0310909_10521946	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	995	Open in IMG/M
3300031947\|Ga0310909_10575531	All Organisms → cellular organisms → Bacteria	942	Open in IMG/M
3300031947\|Ga0310909_11674364	Not Available	503	Open in IMG/M
3300031954\|Ga0306926_10343924	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1845	Open in IMG/M
3300031954\|Ga0306926_11094327	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	943	Open in IMG/M
3300031954\|Ga0306926_11243859	All Organisms → cellular organisms → Bacteria	872	Open in IMG/M
3300031959\|Ga0318530_10075801	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1309	Open in IMG/M
3300031962\|Ga0307479_11273245	Not Available	697	Open in IMG/M
3300031981\|Ga0318531_10136911	All Organisms → cellular organisms → Bacteria → Proteobacteria	1093	Open in IMG/M
3300032001\|Ga0306922_10109687	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2927	Open in IMG/M
3300032039\|Ga0318559_10330880	All Organisms → cellular organisms → Bacteria → Proteobacteria	708	Open in IMG/M
3300032052\|Ga0318506_10338968	All Organisms → cellular organisms → Bacteria → Proteobacteria	667	Open in IMG/M
3300032059\|Ga0318533_10252500	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium leguminosarum	1273	Open in IMG/M
3300032067\|Ga0318524_10707084	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	532	Open in IMG/M
3300032076\|Ga0306924_11543200	Not Available	702	Open in IMG/M
3300032076\|Ga0306924_11555968	Not Available	699	Open in IMG/M
3300032090\|Ga0318518_10552215	All Organisms → cellular organisms → Bacteria	589	Open in IMG/M
3300032091\|Ga0318577_10459436	All Organisms → cellular organisms → Bacteria → Proteobacteria	608	Open in IMG/M
3300032174\|Ga0307470_10063459	All Organisms → cellular organisms → Bacteria	1957	Open in IMG/M
3300032180\|Ga0307471_102573613	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	644	Open in IMG/M
3300032261\|Ga0306920_101876768	All Organisms → cellular organisms → Bacteria → Proteobacteria	843	Open in IMG/M
3300033289\|Ga0310914_10366355	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1303	Open in IMG/M
3300033289\|Ga0310914_10507075	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1091	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	96.99%
Host-Associated	Host-Associated	3.01%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	95.49%
Plants	Host-Associated → Plants	3.01%
Aquatic	Environmental → Aquatic	1.50%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	95.49%
Sediment	Environmental → Aquatic → Sediment	1.50%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.50%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.50%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	72.18%
Loam	Environmental → Terrestrial → Soil → Loam	21.05%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.26%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.50%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.50%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.50%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	63.16%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	15.79%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	8.27%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.51%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.26%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.50%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.50%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.50%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.75%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.75%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	31.58%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	26.32%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	13.53%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.26%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.51%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.51%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.26%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	2.26%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.26%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.50%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.50%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.75%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.75%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.75%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.75%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.75%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006354	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012	Environmental	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017947	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_4_20_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300022529	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026833	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 54 (SPAdes)	Environmental	Open in IMG/M
3300026835	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 60 (SPAdes)	Environmental	Open in IMG/M
3300026868	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 32 (SPAdes)	Environmental	Open in IMG/M
3300026872	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 74 (SPAdes)	Environmental	Open in IMG/M
3300026879	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 50 (SPAdes)	Environmental	Open in IMG/M
3300026887	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 49 (SPAdes)	Environmental	Open in IMG/M
3300026927	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 56 (SPAdes)	Environmental	Open in IMG/M
3300026997	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 66 (SPAdes)	Environmental	Open in IMG/M
3300027010	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 64 (SPAdes)	Environmental	Open in IMG/M
3300027011	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 29 (SPAdes)	Environmental	Open in IMG/M
3300027039	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 14 (SPAdes)	Environmental	Open in IMG/M
3300027042	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 68 (SPAdes)	Environmental	Open in IMG/M
3300027104	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF024 (SPAdes)	Environmental	Open in IMG/M
3300027313	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 45 (SPAdes)	Environmental	Open in IMG/M
3300027516	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 34 (SPAdes)	Environmental	Open in IMG/M
3300027703	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 81 (SPAdes)	Environmental	Open in IMG/M
3300030935	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - OA7 SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032067	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
C688J35102_1190763361	3300002568	Soil	MITQFDDVVNDDKRLAKDEIVAYLERQNGSTVIDKLIKAVVDIHANKQLDEPTIQELLVLLSCIERLSDDLLAWAKRP*
JGIcombinedJ51221_101762354	3300003505	Forest Soil	MTTQFDDVVKDAKRSAKEEIAEYLKRQNGSSTVIDKLIKAVNDIHQNKQLDEPTIQELLVLLSCIERLSDDLLAWAETP*
Ga0062593_1015199101	3300004114	Soil	MTTQFDDVVKDAKRSAKEEIAEYLKRQNGSSSVIEKLIKAVVDIHQNKQLDEPTIQQLLVLLSCIERLSDDLLAWAKTP*
Ga0070709_104046542	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MTTQFDDVVKDAKRSAKEEIAELLKRQNGSSTVIDKLIKAVSDIHQNKQLDEPTIQELLVLLSCIERLSDDLLAWAKTP*
Ga0066903_1003517538	3300005764	Tropical Forest Soil	MTTQFDDVVKDAKRSAREEIAEYLKRKNGSSTIIDKLIKAVSDIHQNKQLDEPTIQELLVLLSCIERLSDDLLAWAKTP*
Ga0066903_1043406252	3300005764	Tropical Forest Soil	TQFDDVVKDAKRSAKEEIAELPKRQNGSSTVIDKLLKAVNDIHQNKQLDEPSIQELLVLLSCIERFSDDLLAWAETP*
Ga0066903_1067940622	3300005764	Tropical Forest Soil	MTTQFDDVVKDAKRSAKEEIAEYLKRQNGSSTVIDKLIKAVNDIHQNKQLDEPTIQELLVLLSCIERLSDDLLAWA
Ga0075028_1004525332	3300006050	Watersheds	MTTQFDDVVKDAKRSAKEEIAEYLKRQNGSSTVIDKLIKAVSDIHQNKQLDEPTIQELLVLLSCIERLSDDLLAWAKTP*
Ga0070716_1000164754	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MTTQFDDIVKDAKRSAKEEIAEYLKRQNGSSTVIDKLIKAVSDIHQNKQLDEPTIQELLVLLSCIERLSDDLLAWA
Ga0070716_1003562511	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MTTQFDDVVKDAKRSAKEEIAELLKRQNGSSTVIDKLIKAVSDIHQNKQLDEPTIQELLVLLSCIERLSDDLLAWA
Ga0070716_1016032722	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MTTQFDDVVKDAKQSAKEEIAEYLKRQNGSSTVIDKLIKAVSDIHQNKQLDEPTIQELLVLLSCIERLSDDLLAWA
Ga0070712_1007661612	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	AKRSAKEEIAEYLKRQNGSSTVIDKLIKAVSDIHQNKQLDEPTIQELLVLLSCIERLSDDLLAWAETP*
Ga0075021_110449861	3300006354	Watersheds	TQFDDVVKDAKRSAKEEIAEYLKRQNGSSTVIDKLIKAVSDIHQNKQLDEPTIQELLVLLSCIERLSDDLLAWAKTP*
Ga0105238_125082272	3300009551	Corn Rhizosphere	MPPQFDDVVKDAKRSAKEEIAEYLKRQNGSSSVIEKLIKAVVDIHQNKQLDEPTIQQLLVLLSCIERLSDDLLAWAKTP*
Ga0126378_123318221	3300010361	Tropical Forest Soil	MTTQFDDVVKDAKRSAREEIAEYLKRKNGSSTIIGKLIKAVSDIHQNKQLDEPTIQELFVLLSCIERLSDDLLAWAKTP*
Ga0126379_122465081	3300010366	Tropical Forest Soil	MTFDDVVKDAKRSAREEIAEYLKRKNGSSTIIDKLIKAVSDIHQNKQLDEPTIQELLVLLSCIERLSDDLLAWAKTP*
Ga0134125_122765571	3300010371	Terrestrial Soil	MTTQFDDVVKDAKRSAKEEIAEYLKRQNGSSSVIDKLIKAVVDIHQNKQLDEPTIQQLLVLLSCIERLSDDLLAWAKTP*
Ga0150983_145303212	3300011120	Forest Soil	MTTQFDDVVKDAKLGAKEEIAELLKRQNGSSTVIDKLIKAVSDIHQNKQLDEPTIQELLVLLSCIERLSDDLLAWAKTP*
Ga0164300_103317811	3300012951	Soil	MTTQFDDVVKDAKRSAKEEIAEYLKRQNGSSSVIEKLIKAVVDIHQNKQLDEPTIQELLVLLSCI
Ga0164298_103025172	3300012955	Soil	MTTQFDDVVKDAKRSAKEEIAEYLKRQNGSSSVIEKLIMAVVDIHQNKQLDEPTIQPLLVLLSCIERLSDDLLAWAKTP*
Ga0164303_103781302	3300012957	Soil	MTTQFDDVVKDAKRSAKEEIAEYLKRQNGSSTVIDKLIKAVSDIHQNKQLDEPTIQELLVLLSCIER
Ga0164303_109379012	3300012957	Soil	MTTQFDDVVKDAKLGAKEEIAELLKRQTGSSTVIDKLIKAVSDIHQNKQLDEPTTQELLVLLSCIERLSDDLLAWAKTP*
Ga0164299_102808972	3300012958	Soil	LLRQSRHNPDEREKIPTQFDDVVKDAKRSAKEEIAEYLKRQNGSSSVIEKLIKAVVDIHQNKQLDEPTIQELLVLLSCIERLSDDLLAWAKTP*
Ga0126369_106524713	3300012971	Tropical Forest Soil	MEHACHAEARRQRVGNRALRQSRHNPEEREMTFDDVVKDAKRSAREEIAEYLKRKNGSSTIIDKLIKAVRDIHQNKQLDEPTIQELLVLLSCIERLSDDLLAWAKTP*
Ga0164309_108622382	3300012984	Soil	AKEEIAEYLKRQNGSSTVIDKLIKAVSDIHQNKQLDEPTIQELLVLLSCIERLSDDLLAWAKTP*
Ga0164304_108148901	3300012986	Soil	MTTQFDDVVKDAKRSAKEEIAELLKRQNGSSTVIDKLIKAVNDIHQNKQLDEPTIQQLLVLLSCIERLSDDLLAWAKTP*
Ga0132258_126000831	3300015371	Arabidopsis Rhizosphere	MMDQQTFKRPRAATLLRESRHNPEEREMTTQFDDVVKDAKRSAKEEIAEYLKRQNGSSTVIDKLIKAVSDIHQNKQLDEPTIQQLLVLLSCIERLSDDLQAWAKTP*
Ga0132255_1025690492	3300015374	Arabidopsis Rhizosphere	MTTQFDDVVNDAKRDAKEQFAGYLERNEASSFNVIDKLIKDVSDIRQNKQLNDSSIKELLILLSCIERLSDDLLAWAKTS*
Ga0182036_107704072	3300016270	Soil	MTTQFDDVVKDAKRSAKEEIAEYLKRQNGSSTVIDKLIKAVNDIHQNKQLDEPAIQELLVLLSCIERLSDDLLAWAETP
Ga0182036_118865801	3300016270	Soil	VTTQFDDVVEDAKRSAKEEIAEYLKRQNGSSTVIDKLIRAVSDIHQNKQLDEPTIQKLLVLLSCIARLSDDL
Ga0182041_104394662	3300016294	Soil	MTTQFDDVVKDAKRSAKEEIAEYLKRQNGSSTVIDKLIKAVNDIHQNKQLDEPTIQEFLVPLSCIER
Ga0182041_113244962	3300016294	Soil	QFDDVVKDAKRSAKEEIAGYLRRQNGSSTVIDKLIKAVNDIHHNKQLDEPTIQELLVLLSCIERLSDDLLAWAKTP
Ga0182033_104695173	3300016319	Soil	VVKDAKRSAKEEIAAYLERQNGSSTVDKLIKAISDIHQNKQLDEPTIQHLLVLLSCIERLSDDLLTWAKAP
Ga0182033_109471911	3300016319	Soil	KMTTQFDDVVKDAKRSAKEEIAEYLKQQNGSSTVIDKLIKAVSDTHQNKQLDEPTIQELLVLLSCIERLSDDLLAWAKTP
Ga0182035_120281251	3300016341	Soil	MPTQFDDVVNDAKRDARKKIAEYLKQQNGSSSVIDKLVKAVSDMHQTKQLDEPTIQELLILLSCIERLSDDLVAWAKTP
Ga0182035_120358491	3300016341	Soil	MTFDDVVKDAKRSAKEEIAAYLERQNGSSTVDKLIKAISDIHQNKQLDEPTIQKLLVLLSCIERLSDDLLAWAKAP
Ga0182032_101086713	3300016357	Soil	MTTQFDDVVKDAKRSAKEENAEYLKRQNGSSTVIDKLIKAVNDIHQNKQLDEPTIQEFLVLLSCIERLSDDLLAWAKTP
Ga0182032_111527202	3300016357	Soil	KDAKRSAKEEIAGYLKRQNGSSTVIDKLIKAVSDVHQNKQLDEPTIQELLVLLSCIERLSDDLLAWAKTP
Ga0182034_103662612	3300016371	Soil	MTTQFDVVKDAKRSAKEEIAGYLRRQNGSSTVIDKLIKAVNDIHHNKQLDEPTIQELLVLLSCIER
Ga0182034_104571302	3300016371	Soil	VTTQFDDVVEDAKRSAKEEIAEYLKRQNGSSTVIDKLIKAVSDIHQNKQLDEPAIQKLLVLLSCIARLSDDLLAWAKTP
Ga0182034_105571402	3300016371	Soil	ARKMTTQFDDVVKDAKRSAKEEIAEYLKRQDGSSTVIDKLIKAVSDIHQNKQLDEPTIQELLVLLSCIERLSDDLLAWAKTP
Ga0182040_113444492	3300016387	Soil	MATQFDDVVKDAKRSAKEEIAGYLKRQNGSSTVIDKLIKAVSDVHQNKQLDEPTTQELLVLLSCIE
Ga0182037_104035792	3300016404	Soil	VTTQFDDVVEDAKRSAKEEIAKYLKRQNGSSTAIDKLIKAVSDIHQNKQLDEPTIQKLLVLLSCIERLSDDLLAWAKTP
Ga0182037_110789251	3300016404	Soil	DVVKDAKRSAKEEIAEYLKQQNGSSTVIDKLIKAVSDIHQNKQLDEPTIQELLVLLSCIERLSDDLLAWAKTP
Ga0182039_104122322	3300016422	Soil	MATQFDDVVKDAKRSAKEEIAGYLKRQNGSSTVIDKLIKAVSDIHQNKQLDEPTIQELLVLLRRIVRLSDDLLAWAKTP
Ga0182038_115934562	3300016445	Soil	MTTQFDDVVKDAKRSAKEEIAEYLKRQDGSSTVIDKLIKAVSDIHQNKQLDEPTIQELLVLLSCIERLSDDLLAWAKTP
Ga0182038_121974461	3300016445	Soil	MPTQFDDVVNDAKRDAREKIAEYLKQQNGSSSVIDKLVKAVSDIHQTKQLDEPTIQELLILLSCIERLSDDLVAWAKTP
Ga0187785_100567722	3300017947	Tropical Peatland	MATQFDDVVKDAKRSAKEEIAGYLKRQNGSSTVIDKLIKAVSDIHQNKQLDEPTIQELLVLLSCIERLSDDLLAWAKTS
Ga0187785_101126912	3300017947	Tropical Peatland	MTTQFDDVVKDAKRSAKEEIAGYLRRQNGSSTVIDKLIKAVNDIHHNKQLDEPTIQELLVLLSCIERLSDDLLAWAKTP
Ga0187777_101683092	3300017974	Tropical Peatland	MATQFDDVVKDAKRSAKEEIAGYLKRQNGSSTVIDKLIKAVSDIHQNKQLDEPTIQELLVLLSCIERLSDDLLAWAKTP
Ga0210407_105429663	3300020579	Soil	AKEEIAELLKRQNGSSTVIDKLIKAVSDIHQNKQLDEPTIQELLVLLSCIERLSDDLLAWAKTP
Ga0210403_100095932	3300020580	Soil	MTTQFDDVVKDAKLGAKEEIAELLKRQNGSSTVIDKLIKAVSDIHQNKQLDEPTIQELLVLLSCIERLSDDLLAWAKTP
Ga0210401_100519391	3300020583	Soil	MTTQFDDVVKDAKRSAKEEIAEYLKRQNGSSTVIDKLIKAVSDIHQNKQLDEPTIQELLVLLSCI
Ga0210401_103493734	3300020583	Soil	MTTQFDDVVKDAKRSAKEEIAELLKRQNGSSTVIDKLIKAVSDIHQNKQLDEPTIQELLVLLSCI
Ga0210387_104045833	3300021405	Soil	KRSAKEEIAELLKRQNGSSTVIDKLIKAVSDIHQNKQLDEPTIQELLVLLSCIERLSDDLLAWAKTP
Ga0210387_116699121	3300021405	Soil	MTTQFDDVVKDAKRSAKEEIAELLKRQNGSSTIIDKLIKAVSDIHQNKQLDEPTIQELLVLLSCIERLSDDLLAWAKTP
Ga0210410_100886921	3300021479	Soil	MTTQFDDVVKDAKRSAKEEIAELLKRQNGSSTVIDKLIKAVSDIHQNKQLDEPTIQELLVLLSCIERLSDDL
Ga0242668_10567561	3300022529	Soil	MTTQFDDVVKDAKLGAKEEIAELLKRQNGSSTVIDKLIKAVSDIHQNKQLDEPTIQELLVLLSCIERLSDDLLAWAETP
Ga0207687_115957673	3300025927	Miscanthus Rhizosphere	KRSAKDEIAEYLKRQNGGSTVIDQLIKAVNDIHQNKQLDESTIQKLLVLLSYIERVSDELLMWAQTP
Ga0207665_104753621	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	VKDAKRSAKEEIAEYLKRQNGSSTVIDKLIKAVSDIHQNKQLDEPTIQELLVLLSCIERLSDDLLAWAKTP
Ga0207728_1068132	3300026833	Tropical Forest Soil	MTTQFDDVVKDAKRSAKEEIAEYLKRQNGSSTVIDKLIKAVNDIHQNKQLDEPTIQELLVLLSCIERLSDDLLAWAKTP
Ga0207782_1067372	3300026835	Tropical Forest Soil	MTTQFDDVVKDAKRSAKEEIAEYLKRQNGSSTVIDKLIKAVSDIHQNKHLDEPTIQELLVLLSCIERLSDDLLAWAKTP
Ga0207818_10162702	3300026868	Tropical Forest Soil	MTTQFDDVVKDAKRSVKEEIAEYLKRQDGSSTVIDKLIKAVNDIHQNKQLDEPTIQELLVLLSCIERLSDDLLVWAKTP
Ga0207785_10106151	3300026872	Tropical Forest Soil	MATQFDDVVKDAKRSAKEEIAGYLKRQNGSSTVIDKLIKAVSDIHQNKKLDEPTIQELLVLLSCIERLSDDLLTWARTP
Ga0207763_10096132	3300026879	Tropical Forest Soil	MTTQFDDVVKDAKRSAKQEIAEYLKRQNGSSTVIDKLIKAVNDIHQNKQLDEPTIQELLVLLSCIERLSDDLLVWAKTP
Ga0207805_10273861	3300026887	Tropical Forest Soil	MTTQFDDVVKDAKRSAKEEIAGYLKRQNGSSTVIDKLIKAVSDIHQNKQLDEPTIQELLVLLSCIERLSDDLLAWAKTP
Ga0207744_10197292	3300026927	Tropical Forest Soil	MTTQFDDVVKDAKRSAKEEIAEYLKRQNGSSTVIDKLIKAVNDIHQNKQLDEPTIQELLVLLSCIERLSDDLLVWAKTP
Ga0207784_10129222	3300026997	Tropical Forest Soil	MATQFDDVVKDAKRSVKEEIAEYLKRQNGSSTVIDKLIKAVSDIHQNKHLDEPTIQELLVLLSCIERLSDDLLAWAKTP
Ga0207839_10430571	3300027010	Tropical Forest Soil	MATQFDDVVKDAKRSAKEEIAGYLKRQNGSSTVIDKLIKAVSDIHQNKHLDEPTIQELLVLLSCIERLSDDLLAWVKAP
Ga0207740_10064355	3300027011	Tropical Forest Soil	MTTQFDDVVKDAKRSAKEEIAGYLKRQNGSSTVIDKLIKAVNDIHQNKQLDEPTIQELLVLLSCIERLSDDLLVWAKTP
Ga0207855_10348372	3300027039	Tropical Forest Soil	MTTQFDDVVKDAKRSAKEEIAEYLKQKNGSSTIIDKLIKAVSDIHQNKQLDEPTIQELLVLLSCIERLSDDLLVWAKTP
Ga0207766_10238311	3300027042	Tropical Forest Soil	MATQFDDVVKDAKRSAKEEIAGYLKRQNGSSTVIDKLIKAVSDIHQNKKLDEPTIQELLVLLSCIERLSDDLLAWAKTP
Ga0208095_10067401	3300027104	Forest Soil	MTTQFDDVVKDAKRSAKEEIAELLKRQNGSSTVIDKLIKAVSDIHQNKQLDEPTIQELLVLLSCIERLSDDLLAWAETP
Ga0207780_10162102	3300027313	Tropical Forest Soil	MATQFDDVVKDAKRSAKEEIAGYLKRQNGSSTVIDKLIKAVSDIHQNKQLDEPTIQELLVLLSCIERLSDDLLVWAKTP
Ga0207761_10083135	3300027516	Tropical Forest Soil	MTTQFDDVVKDAKRSAKEQIAEYLKRQNGSSTVIDKLIKAVSDIHENEQLDEPTIQELLVLLSCIERLSDDLLAWAKTP
Ga0207862_11144072	3300027703	Tropical Forest Soil	MTTQFDDVVKDAKRSVKEEIAEYLKRQNGSSTVIDKLIKAVNDIHQNKQLDEPTIQELLVLLSCIERLSDDLLVWAKTP
Ga0075401_110756801	3300030935	Soil	MTTQFDDVVKDAKLSAKEEIAELLKRQNGSSTVIDKLIKAVSDIHQNKQLDEPTIQELLVLLSCIERLRDDLLAWAKTP
Ga0170818_1114532783	3300031474	Forest Soil	MTTQFDDVVKDAKRSAKEEIAELLKRQNGSSTVIDKLIKAVSDIHQNKQLDEPTIQELLVLLSCIERLSDDLLAWAETS
Ga0318534_104463412	3300031544	Soil	MTTQFDDVVKDAKRSAKEEIAEYLKQQNGSSTVIDKLIKAVSDIHQNKQLDEPTIQELLVLLSCIERLSDDLLAWAKTP
Ga0318541_103472923	3300031545	Soil	MTTQFDDVVKDAKRSAKEEIAEYLKQKNGSSTVIDKLIKAVSDIHHNKQLDETTIQELLVLLSCIERLSDDLLAWAKTP
Ga0318528_107426391	3300031561	Soil	MTFDDVVKDAKRSAKEEIAAYLERQNGSSTVDKLIKAISDIHQNKQLDEPTIQHLLVLLSCIERLSDDLLTWAKAP
Ga0310915_100644256	3300031573	Soil	MTTQFDDVVKDAKRSAKEEIAEYLKRQNGSSTIIDKLIKAVSDIHQNKQLDEPIIQQLLVLLSCIERLSDDLLAWAKTP
Ga0310915_101907133	3300031573	Soil	DAKRSAKEEIAGYLRRQNGSSTVIDKLIKAVNDIHHNKQLDEPTIQELLVLLSCIERLSDDLLAWAKTP
Ga0310915_101929901	3300031573	Soil	VTTQFDDVVEDAKRSAKEEIAEYLKRQNGSSTVIDKLIRAVSDIHQNKQLDEPTIQKLLVLLSCIARLSDDLLAWAKTP
Ga0310915_102375191	3300031573	Soil	MTTQFDDVVKDAKRSAKEEIAEYLKQQNGSSTVIDKLIKAVSDIHQNKQLDEPTIQELLVLLSCIERLSDDLLA
Ga0310915_105972261	3300031573	Soil	MTTQFDDVVKDAKRSAKEEIAKYLKRQNGSSTAIDKLIKAVSDIHQNKQLDEPTIQKLLVLLSCIERLSDDLLAWAKTP
Ga0318542_102970782	3300031668	Soil	MTTQFDDVVKDAKRSAKEEIAKYLKRQNGSSTAIDKLIKAVSDIHQNKQLDEPTIQKLLVLLSCIERLSD
Ga0307474_103565672	3300031718	Hardwood Forest Soil	MTTQFDDVVKDAKRSAKEEIAELLKRQNGSSTVIDKLIKAVSDIHQNKQLDEPTIQELLVLLSCIERLSDDLLAWAEMP
Ga0318501_106826962	3300031736	Soil	DAKRSAKEEIAEYLKRRNGSSTVIDKLIKAVSDIHQNKQLDEPTIQELLVLLSCIERLSDDLLAWAKTP
Ga0306918_109917422	3300031744	Soil	QFDDVVNDAKRDARKKIAEYLKQQNGSSSVIDKLVKAVSDMHQTKQLDEPTIQELLILLSCIERLSDDLVAWAKTP
Ga0307477_105713921	3300031753	Hardwood Forest Soil	MTTQFDDVVKDAKQSAKEEIAEYLKRQNGSSTVIDKLIKAVSDIHQNKQLDEPTIQELLVLLSCIERLSDDLLAWAKTP
Ga0318509_105882431	3300031768	Soil	MTTQFDDVVKDAKRSAKEEIAEYLKRQNGSSTVIDKLIKAVSDIHQNKQLDEPTIQKLLVLLSCIER
Ga0307473_110861842	3300031820	Hardwood Forest Soil	MTTQFDDIVKDAKRSAKEDIAEYLKRQNGSSTVIDKLIKAVSDIHQNKQLDEPTIQELLVLLSCIERLSDDLLAWAKTP
Ga0310917_110538812	3300031833	Soil	MTTQFDDVVKDAKRSAKEEIAEYLKRQDGSSTVIDKLIKAVSDIHQNKQLDEPTIQELLVLLSCIERLSDDLRAWAETP
Ga0306919_101673002	3300031879	Soil	MTTQFDDVVKDAKRSAKEEIAEYLKRQNGSSTVIDKLVKAVNDIHQNKQLDEPTIQELLVLLSCIERLSDDLLAWAKTP
Ga0306919_111945611	3300031879	Soil	MHTQFDDVVNDAKRDARKKIAEYLKQQNGSSSVIDKLVKAVSDIHQTKQLDEPTIQELLILLSCIERLSDDLVAWAKTP
Ga0306925_101128622	3300031890	Soil	MTTQFDDVVKDAKRSAKEEIAEYLKRQNGSSTVIDKLIKAVNDIHQNKQLDESTIQELLVLLSCIERLGDDLLAWAKTP
Ga0306925_105521323	3300031890	Soil	MTTQFDVVKDAKRSAKEEIAGYLRRQNGSSTVIDKLIKAVNDIHHNKQLDEPTIQELLVLLSCIERLSDDLLAWAKTP
Ga0306925_108982902	3300031890	Soil	VTTQFDDVVEDAKRSAKEEIAEYLKRQNGSSTVIDKLIKAVSDIHQNKQLDEPTIQKLLVLLSCIERLSDDLLAWAKAP
Ga0306923_100744423	3300031910	Soil	MTTQFDDVVKDAKRSAKEEIAEYLKRQNGSSTVIDKLIKAVNDIHQNKQLDEPTIQEFLVLLSCIERLSDDLLAWAKTP
Ga0306923_103111385	3300031910	Soil	VTTQFDDVVEDAKRSAKEEIAEYLKRQNGSSTVIDKLIKAVSDIHQNKQLDEPTIQKLLVLLSCIARLSDDLLAWAKTP
Ga0306923_120442463	3300031910	Soil	KIHLTRRSEKMTTQFDDVAKDAKRSAKEEIAEYLKRQNGSSTVIDKLIKAVNDTHQNKQLDESTIQELLVLLSCIERLSDDLLAWAKTP
Ga0310912_101357913	3300031941	Soil	MATQFDDVVKDAKRSAKEEIAGYLKRQNGSSTVIDKLIKAVSDVHQNKQLDEPTTQELLVLLSCIERLSDDLLAWAKTP
Ga0310912_107101722	3300031941	Soil	MPTQFDDVVNDAKRDARKKIAEYLKQQNGSSSVIDKLVKAVSDIHQTKQLDEPTIQELLILLSCIERLSDDLVAWAKTP
Ga0310912_109865581	3300031941	Soil	MTTQFDDVVKDAKRSAKEEIAEYLKRQNGSSTVIDKLIKAVNDTHQNKQLDESTIQELLVLLSCIERLSDDLLAWAKTP
Ga0310916_108223142	3300031942	Soil	MTTQFDDVVKDAKRSAKEEIAEYLKRRNGSSTVIDKLIKAVSDIHQNKQLDEPTIQELLVLLSCIERLSDDLLAWAKTP
Ga0310916_109911791	3300031942	Soil	MTTQFDDVVKDAKRSAKEEIAEYLKQQNGSSTVIDKLIKAVSDIHQNKQLDEPTIQELLVLLSCI
Ga0310916_111321421	3300031942	Soil	MTTQFDDVVKDAKRSAKEEIAEYLKRKNGSSTVIDKLIKAVSDTHQNKQLDEPTIQELLVLLSCIERLSDDLLAWAKTP
Ga0310916_112662023	3300031942	Soil	MTTQFDDVVKDAKRSAREEIAEYLKRKNGSSTIIDKLIKAVSDIHQNKQLDEPIIQQLLVLLSCIERLSDDLLAWAKTP
Ga0310909_1001661810	3300031947	Soil	MTTQFDDVVKDAKRIAKEEIAEYLKRQNGSSTVIDKLIKAVNDIHQNKQLDEPTIQEFLVLLSCIERLSDDLLAWAKTP
Ga0310909_105219463	3300031947	Soil	MTTQFDDVVKDAKRSAKEEIAEYLKRQNGSSTVIDKLIKAVNDTHQNKQLDESTIQELLVLLSCIERLGDDLLAWAKTP
Ga0310909_105755311	3300031947	Soil	MTTQFDDVVKDAKRSAKEEIADYLKRQNGSSTVIDNLIKAVSDIHQNKELDEPIIQQLLVLLSCIERLSDDLLAWAKAP
Ga0310909_116743642	3300031947	Soil	TTQFDDVVKDAKRSAKEEIAEYLKRQNGSSTIIDKLIKAVSDIHQNKQLDEPIIQQLLVLLSCIERLSDDLLAWAKTP
Ga0306926_103439243	3300031954	Soil	MHTQFDDVVNDAKRDARKKIAEYLKQQNGSSSVIDKLVKAVSDMHQTKQLDEPTIQELLILLSCIERLSDDLVAWAKTP
Ga0306926_110943272	3300031954	Soil	MATQFDDVVKDAKRSAKEEIAGYLKRQNGSSTVIDKLIKAVSDIHQNKQLDEPTIQELLVLLSCIE
Ga0306926_112438591	3300031954	Soil	AKDAKRSAREEIAEYLKRQNGSSTVIDKLIKAVNDTHQNKQLDESTIQELLVLLSCIERLSDDLLAWAKTP
Ga0318530_100758014	3300031959	Soil	MTTQFDDVVKDAKRSAKEEIAKYLKRQNGSSTAIDKLIKAVSDIHQNKQLDEPTIQELLVLLSCIERLSDDLLAWAKTP
Ga0307479_112732452	3300031962	Hardwood Forest Soil	MTTQFDDVVKDAKRSAKEEIAEYLKRQNGSSTVIDKLIKAVSDIHQNKQLDEPTIQELLVLLSCIGRLSDDLLAWAK
Ga0318531_101369112	3300031981	Soil	VTTQFDDVVEDAKRSAKEEIAEYLKRQNGSSTVIDKLIKAVSDIHQNKQLDEPTIQELLVLLSCIERLSDDLLAWAKTP
Ga0306922_101096871	3300032001	Soil	MTTQFDDVVKDAKRSAKEEIAEYLKRQNGSSTVIDKLIKAVSDIHQNKQLDEPTIQKLLVLLSCIERLSDDLLAGAKTP
Ga0318559_103308802	3300032039	Soil	MTFDDVVKDAKRSAQEEIAEYLKRQNGSSTVIDKLIKAVNDTHQNKQLDESTIQELLVLLSCIERLSDDLLAWAKTP
Ga0318506_103389681	3300032052	Soil	MTTQFDDVVKDAKRSAKEEIAEYLKRQNGSSTIIDKLIKAVSDIHQNKQLDEPTIQKLLVLLSCIERLSDDLLAWAKTP
Ga0318533_102525001	3300032059	Soil	MTTQFDDVVKDAKGSAKEEIAEYLKQKNGSSTVIDKLIKAVSDIHHNKQLDETTIQELLVLLSCIERLSDDLLAWAKTP
Ga0318524_107070842	3300032067	Soil	MTTQFDDVAKDAKRSAKEEIAEYLKRQNGSSTVIDKLIKAVNDTHQNKQLDESTIQELLVLLSCIERLSDDLLAWAKTP
Ga0306924_115432001	3300032076	Soil	MTTQFDDVVKDAKRSAKEEIAEYLKQQNGSSTVIDKLIKAVSDIHQNKQLDEPTIQELLVLLSCIERLSDD
Ga0306924_115559682	3300032076	Soil	MTTQFDDVVKDAKRSAKQEIAEYLKRQNGSSTVIDKLIKAVNDIHQNKQLDEPTIQELLVLLSC
Ga0318518_105522152	3300032090	Soil	VKDAKRSAREEIAEYLKRKNGSSTIIDKLIKAVSDIHQNKQLDEPTIQELLVLLSCIERLSDDLLAWAKTP
Ga0318577_104594361	3300032091	Soil	MTTQFDDVVKDAKRSAKEEIAEYLKRRNGSSTVIDKLIKAVSDIHQNKQLDEPTIQELLVLLSCIERLSDDLLAWAKT
Ga0307470_100634593	3300032174	Hardwood Forest Soil	MTTQFDDIVKDAKRSAKEEIAEYLKRQNGSSTVIDKLIKAVSDIHQNKQLDEPTIQELLVLLSCIERLSDDLLAWAKTP
Ga0307471_1025736132	3300032180	Hardwood Forest Soil	KDAKRSAKEDIAEYLKRQNGSSTVIDKLIKAVSDIHQNKQLDEPTIQELLVLLSCIERLSDDLLAWAKTP
Ga0306920_1018767682	3300032261	Soil	MHTQFDDVVNDAKRDARKKIAEYLKQQNGSSSVIDKLVKAVSDMHQTKQLDEPTIQELLILLSCI
Ga0310914_103663552	3300033289	Soil	VTTQFDDVVEDAKRSAKEEIAEYLKRQNGSSTVIDKLIKAVSDIHQNKQLDEPTIQKLLVLLSCIARLSDDLLAWAKAP
Ga0310914_105070752	3300033289	Soil	SAKEEIAEYLKRQNGSSTVIDKLIKAVNDIHQNKQLDEPTIQEFLVLLSCIERLSDDLLAWAKTP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F060293

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences