Metagenome Family F060198

Basic Information
Family ID	F060198
Family Type	Metagenome
Number of Sequences	133
Average Sequence Length	50 residues
Representative Sequence	MLALTLLVAIAALVAWALLIFGGVTTAGVTHLLLAVGIVLLVRWWALRA
Number of Associated Samples	117
Number of Associated Scaffolds	133

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	90.91 %
% of genes near scaffold ends (potentially truncated)	16.54 %
% of genes from short scaffolds (< 2000 bps)	88.72 %
Associated GOLD sequencing projects	110
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.75

Most Common Taxonomy
Group	Bacteria (58.647 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (12.030 % of family members)
Environment Ontology (ENVO)	Unclassified (29.323 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (33.835 % of family members)

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 55.84% β-sheet: 0.00% Coil/Unstructured: 44.16%
Feature Viewer

Powered by Feature Viewer

SCOP family	SCOP domain	Representative PDB	TM-score
a.62.1.0: automated matches	d6ygia_	6ygi	0.85669
a.2.17.3: VPS37 C-terminal domain-like	d2f66c1	2f66	0.84154
a.25.3.0: automated matches	d2vs0a_	2vs0	0.83592
a.25.1.1: Ferritin	d2fjca1	2fjc	0.82638
a.102.1.0: automated matches	d3qrya_	3qry	0.81949

Pfam ID	Name	% Frequency in 133 Family Scaffolds
PF01242	PTPS	24.06
PF02397	Bac_transf	21.80
PF01227	GTP_cyclohydroI	7.52
PF00106	adh_short	3.01
PF00535	Glycos_transf_2	0.75
PF00685	Sulfotransfer_1	0.75

COG ID	Name	Functional Category	% Frequency in 133 Family Scaffolds
COG0720	6-pyruvoyl-tetrahydropterin synthase	Coenzyme transport and metabolism [H]	24.06
COG2148	Sugar transferase involved in LPS biosynthesis (colanic, teichoic acid)	Cell wall/membrane/envelope biogenesis [M]	21.80

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	58.65 %
Unclassified	root	N/A	41.35 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	58.65 %
Unclassified	root	N/A	41.35 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	58.65 %
Unclassified	root	N/A	41.35 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.35 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	30.08 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.35 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	27.07 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	3.01 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.35 %
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	18.05 %
Gemmatimonadetes	class	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes	9.02 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	3.01 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.35 %
Gemmatimonadetes bacterium HGW-Gemmatimonadetes-1	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium HGW-Gemmatimonadetes-1	18.05 %
Gemmatimonadales	order	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	9.02 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	3.01 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.35 %
Gemmatimonadetes bacterium HGW-Gemmatimonadetes-1	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium HGW-Gemmatimonadetes-1	18.05 %
unclassified Gemmatimonadales	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales	8.27 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	3.01 %
Gemmatimonadaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.35 %
Gemmatimonadetes bacterium HGW-Gemmatimonadetes-1	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium HGW-Gemmatimonadetes-1	18.05 %
Gemmatimonadales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	8.27 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	3.01 %
Gemmatirosa	genus	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.35 %
Gemmatimonadetes bacterium HGW-Gemmatimonadetes-1	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium HGW-Gemmatimonadetes-1	18.05 %
Gemmatimonadales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	8.27 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	3.01 %
Gemmatirosa kalamazoonesis	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	0.75 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2199352024\|deeps__Contig_188396	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	1064	Open in IMG/M
3300000891\|JGI10214J12806_12545005	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	784	Open in IMG/M
3300002568\|C688J35102_119988907	Not Available	837	Open in IMG/M
3300003321\|soilH1_10022797	All Organisms → cellular organisms → Bacteria	1719	Open in IMG/M
3300003321\|soilH1_10048849	All Organisms → cellular organisms → Bacteria	1810	Open in IMG/M
3300003323\|rootH1_10257397	All Organisms → cellular organisms → Bacteria	1017	Open in IMG/M
3300003990\|Ga0055455_10031076	All Organisms → cellular organisms → Bacteria	1381	Open in IMG/M
3300004020\|Ga0055440_10013757	All Organisms → cellular organisms → Bacteria	1502	Open in IMG/M
3300004157\|Ga0062590_100203012	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium HGW-Gemmatimonadetes-1	1435	Open in IMG/M
3300004463\|Ga0063356_100366351	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	1832	Open in IMG/M
3300004479\|Ga0062595_100819622	Not Available	770	Open in IMG/M
3300004479\|Ga0062595_100822542	Not Available	769	Open in IMG/M
3300004479\|Ga0062595_100885345	All Organisms → cellular organisms → Bacteria	750	Open in IMG/M
3300004643\|Ga0062591_101067066	Not Available	775	Open in IMG/M
3300004778\|Ga0062383_10070386	All Organisms → cellular organisms → Bacteria	1431	Open in IMG/M
3300004781\|Ga0062379_10084601	Not Available	710	Open in IMG/M
3300005175\|Ga0066673_10785325	Not Available	545	Open in IMG/M
3300005434\|Ga0070709_10150311	All Organisms → cellular organisms → Bacteria	1609	Open in IMG/M
3300005439\|Ga0070711_100088384	All Organisms → cellular organisms → Bacteria	2226	Open in IMG/M
3300005439\|Ga0070711_100718866	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	842	Open in IMG/M
3300005440\|Ga0070705_100253403	All Organisms → cellular organisms → Bacteria	1237	Open in IMG/M
3300005445\|Ga0070708_100189170	All Organisms → cellular organisms → Bacteria	1925	Open in IMG/M
3300005455\|Ga0070663_100822642	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium HGW-Gemmatimonadetes-1	798	Open in IMG/M
3300005458\|Ga0070681_10098490	All Organisms → cellular organisms → Bacteria	2870	Open in IMG/M
3300005536\|Ga0070697_100589307	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	977	Open in IMG/M
3300005546\|Ga0070696_101701349	Not Available	544	Open in IMG/M
3300005547\|Ga0070693_100108584	All Organisms → cellular organisms → Bacteria	1703	Open in IMG/M
3300005553\|Ga0066695_10545919	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium HGW-Gemmatimonadetes-1	705	Open in IMG/M
3300005564\|Ga0070664_102107718	Not Available	535	Open in IMG/M
3300005577\|Ga0068857_101274602	Not Available	713	Open in IMG/M
3300005764\|Ga0066903_107313996	Not Available	571	Open in IMG/M
3300005841\|Ga0068863_101514066	Not Available	679	Open in IMG/M
3300005841\|Ga0068863_102429067	Not Available	534	Open in IMG/M
3300005874\|Ga0075288_1079439	Not Available	534	Open in IMG/M
3300005885\|Ga0075284_1016192	Not Available	887	Open in IMG/M
3300005887\|Ga0075292_1041600	Not Available	651	Open in IMG/M
3300006034\|Ga0066656_10135791	All Organisms → cellular organisms → Bacteria	1527	Open in IMG/M
3300006175\|Ga0070712_101366688	Not Available	618	Open in IMG/M
3300006755\|Ga0079222_10095750	All Organisms → cellular organisms → Bacteria	1544	Open in IMG/M
3300006755\|Ga0079222_10140841	All Organisms → cellular organisms → Bacteria	1352	Open in IMG/M
3300006755\|Ga0079222_10708352	All Organisms → cellular organisms → Bacteria	799	Open in IMG/M
3300006846\|Ga0075430_100860343	Not Available	747	Open in IMG/M
3300006847\|Ga0075431_101897186	Not Available	551	Open in IMG/M
3300006852\|Ga0075433_10037341	All Organisms → cellular organisms → Bacteria	4190	Open in IMG/M
3300006854\|Ga0075425_100613756	All Organisms → cellular organisms → Bacteria	1251	Open in IMG/M
3300006871\|Ga0075434_102187429	Not Available	557	Open in IMG/M
3300006954\|Ga0079219_10002982	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	4706	Open in IMG/M
3300007076\|Ga0075435_101266439	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	646	Open in IMG/M
3300009012\|Ga0066710_104902913	Not Available	501	Open in IMG/M
3300009090\|Ga0099827_10129991	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium HGW-Gemmatimonadetes-1	2039	Open in IMG/M
3300009100\|Ga0075418_10283973	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium HGW-Gemmatimonadetes-1	1763	Open in IMG/M
3300009137\|Ga0066709_100873388	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium HGW-Gemmatimonadetes-1	1308	Open in IMG/M
3300010039\|Ga0126309_10133454	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	1316	Open in IMG/M
3300010041\|Ga0126312_10525692	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium HGW-Gemmatimonadetes-1	848	Open in IMG/M
3300010041\|Ga0126312_10691431	Not Available	736	Open in IMG/M
3300010044\|Ga0126310_10650390	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	793	Open in IMG/M
3300010045\|Ga0126311_11876615	Not Available	509	Open in IMG/M
3300010373\|Ga0134128_13066671	Not Available	513	Open in IMG/M
3300010396\|Ga0134126_10696186	All Organisms → cellular organisms → Bacteria	1155	Open in IMG/M
3300010397\|Ga0134124_11221765	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium HGW-Gemmatimonadetes-1	772	Open in IMG/M
3300011431\|Ga0137438_1021687	All Organisms → cellular organisms → Bacteria	1850	Open in IMG/M
3300011438\|Ga0137451_1228995	Not Available	587	Open in IMG/M
3300011444\|Ga0137463_1023875	All Organisms → cellular organisms → Bacteria	2206	Open in IMG/M
3300012201\|Ga0137365_11053617	Not Available	588	Open in IMG/M
3300012204\|Ga0137374_10615192	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium HGW-Gemmatimonadetes-1	826	Open in IMG/M
3300012208\|Ga0137376_11341414	Not Available	606	Open in IMG/M
3300012212\|Ga0150985_120740420	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	769	Open in IMG/M
3300012353\|Ga0137367_10396674	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium HGW-Gemmatimonadetes-1	978	Open in IMG/M
3300012355\|Ga0137369_10899305	Not Available	595	Open in IMG/M
3300012668\|Ga0157216_10218919	Not Available	896	Open in IMG/M
3300012917\|Ga0137395_10432152	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium HGW-Gemmatimonadetes-1	945	Open in IMG/M
3300012929\|Ga0137404_11600404	Not Available	604	Open in IMG/M
3300012931\|Ga0153915_13202212	Not Available	532	Open in IMG/M
3300012937\|Ga0162653_100043960	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium HGW-Gemmatimonadetes-1	679	Open in IMG/M
3300012957\|Ga0164303_10033943	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	2126	Open in IMG/M
3300012957\|Ga0164303_10522504	Not Available	765	Open in IMG/M
3300012957\|Ga0164303_11371485	Not Available	527	Open in IMG/M
3300012958\|Ga0164299_10239779	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	1076	Open in IMG/M
3300012986\|Ga0164304_10524523	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	870	Open in IMG/M
3300012987\|Ga0164307_10245904	All Organisms → cellular organisms → Bacteria	1245	Open in IMG/M
3300012989\|Ga0164305_11780842	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	555	Open in IMG/M
3300014314\|Ga0075316_1018586	All Organisms → cellular organisms → Bacteria	1340	Open in IMG/M
3300015371\|Ga0132258_12576693	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium HGW-Gemmatimonadetes-1	1271	Open in IMG/M
3300017695\|Ga0180121_10057184	All Organisms → cellular organisms → Bacteria	1379	Open in IMG/M
3300018000\|Ga0184604_10174730	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium HGW-Gemmatimonadetes-1	722	Open in IMG/M
3300018000\|Ga0184604_10223027	Not Available	654	Open in IMG/M
3300018028\|Ga0184608_10015048	All Organisms → cellular organisms → Bacteria	2714	Open in IMG/M
3300018054\|Ga0184621_10144246	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium HGW-Gemmatimonadetes-1	857	Open in IMG/M
3300018056\|Ga0184623_10156552	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium HGW-Gemmatimonadetes-1	1053	Open in IMG/M
3300018059\|Ga0184615_10708015	Not Available	511	Open in IMG/M
3300018066\|Ga0184617_1023303	All Organisms → cellular organisms → Bacteria	1400	Open in IMG/M
3300018071\|Ga0184618_10051542	All Organisms → cellular organisms → Bacteria	1498	Open in IMG/M
3300018429\|Ga0190272_10260444	All Organisms → cellular organisms → Bacteria	1310	Open in IMG/M
3300018466\|Ga0190268_11026994	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium HGW-Gemmatimonadetes-1	661	Open in IMG/M
3300018920\|Ga0190273_10285078	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium HGW-Gemmatimonadetes-1	1094	Open in IMG/M
3300021080\|Ga0210382_10163184	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium HGW-Gemmatimonadetes-1	959	Open in IMG/M
3300021090\|Ga0210377_10789373	Not Available	514	Open in IMG/M
3300021413\|Ga0193750_1039798	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium HGW-Gemmatimonadetes-1	1030	Open in IMG/M
3300021445\|Ga0182009_10468418	Not Available	660	Open in IMG/M
3300022756\|Ga0222622_10275182	All Organisms → cellular organisms → Bacteria	1150	Open in IMG/M
3300025313\|Ga0209431_11243266	Not Available	506	Open in IMG/M
3300025326\|Ga0209342_10638441	Not Available	862	Open in IMG/M
3300025538\|Ga0210132_1028372	Not Available	794	Open in IMG/M
3300025552\|Ga0210142_1004480	All Organisms → cellular organisms → Bacteria	2556	Open in IMG/M
3300025910\|Ga0207684_11361825	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium HGW-Gemmatimonadetes-1	582	Open in IMG/M
3300025939\|Ga0207665_10686516	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium HGW-Gemmatimonadetes-1	804	Open in IMG/M
3300025945\|Ga0207679_12052980	Not Available	520	Open in IMG/M
3300026020\|Ga0208531_1000838	All Organisms → cellular organisms → Bacteria	2513	Open in IMG/M
3300026088\|Ga0207641_11380413	Not Available	705	Open in IMG/M
3300026095\|Ga0207676_10086533	All Organisms → cellular organisms → Bacteria	2560	Open in IMG/M
3300027716\|Ga0209682_10002616	All Organisms → cellular organisms → Bacteria	5269	Open in IMG/M
3300027735\|Ga0209261_10056290	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium HGW-Gemmatimonadetes-1	990	Open in IMG/M
3300027882\|Ga0209590_10646666	Not Available	679	Open in IMG/M
3300028380\|Ga0268265_12523921	Not Available	520	Open in IMG/M
3300028718\|Ga0307307_10051824	All Organisms → cellular organisms → Bacteria	1204	Open in IMG/M
3300028799\|Ga0307284_10343471	Not Available	604	Open in IMG/M
3300028803\|Ga0307281_10415969	Not Available	516	Open in IMG/M
3300028809\|Ga0247824_10135049	All Organisms → cellular organisms → Bacteria	1319	Open in IMG/M
(restricted) 3300031197\|Ga0255310_10231006	Not Available	522	Open in IMG/M
(restricted) 3300031248\|Ga0255312_1123133	Not Available	639	Open in IMG/M
(restricted) 3300031248\|Ga0255312_1170922	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium HGW-Gemmatimonadetes-1	544	Open in IMG/M
3300031548\|Ga0307408_101033900	Not Available	759	Open in IMG/M
3300031548\|Ga0307408_101618195	Not Available	615	Open in IMG/M
3300031548\|Ga0307408_102122285	Not Available	542	Open in IMG/M
3300031824\|Ga0307413_11849248	Not Available	541	Open in IMG/M
3300031824\|Ga0307413_12167276	Not Available	504	Open in IMG/M
3300031938\|Ga0308175_100012048	All Organisms → cellular organisms → Bacteria	6555	Open in IMG/M
3300031965\|Ga0326597_11009132	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	840	Open in IMG/M
3300032002\|Ga0307416_100067989	All Organisms → cellular organisms → Bacteria	2942	Open in IMG/M
3300032421\|Ga0310812_10069553	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1397	Open in IMG/M
3300033486\|Ga0316624_12052599	Not Available	531	Open in IMG/M
3300034817\|Ga0373948_0195800	Not Available	525	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	78.95%
Host-Associated	Host-Associated	21.05%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	60.90%
Plants	Host-Associated → Plants	21.05%
Aquatic	Environmental → Aquatic	18.05%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	60.15%
Rhizosphere	Host-Associated → Plants → Rhizosphere	13.53%
Sediment	Environmental → Aquatic → Sediment	9.02%
Rhizoplane	Host-Associated → Plants → Rhizoplane	6.77%
Freshwater	Environmental → Aquatic → Freshwater	6.02%
Marine	Environmental → Aquatic → Marine	3.01%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	0.75%
Rhizome	Host-Associated → Plants → Rhizome	0.75%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	40.60%
Loam	Environmental → Terrestrial → Soil → Loam	12.78%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	9.77%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	9.02%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	5.26%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.51%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	3.76%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.76%
Wetlands	Environmental → Aquatic → Marine → Wetlands	3.01%
Sand	Environmental → Terrestrial → Soil → Sand	2.26%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.50%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.50%
Ice	Environmental → Aquatic → Freshwater → Ice	0.75%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	0.75%
Unclassified	Host-Associated → Plants → Rhizome → Unclassified	0.75%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	27.07%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	9.77%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	9.02%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	9.02%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	8.27%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	5.26%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	4.51%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	3.76%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.76%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.76%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	3.01%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	2.26%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.50%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.50%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.50%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	1.50%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.50%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	0.75%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.75%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	0.75%
Unclassified	Host-Associated → Plants → Rhizome → Unclassified → Unclassified	0.75%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	12.03%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	8.27%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	6.77%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	6.02%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	5.26%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	4.51%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	3.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	3.76%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	3.76%
Wetland Sediment	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment	3.01%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	3.01%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	3.01%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	3.01%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	3.01%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	2.26%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.26%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.26%
Sandy Soil	Environmental → Terrestrial → Soil → Sand → Unclassified → Sandy Soil	2.26%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	1.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.50%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	1.50%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.50%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.50%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	1.50%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.75%
Polar Desert Sand	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand	0.75%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.75%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.75%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.75%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.75%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.75%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.75%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	0.75%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.75%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.75%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.75%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.75%
Sugarcane Root And Bulk Soil	Host-Associated → Plants → Rhizome → Unclassified → Unclassified → Sugarcane Root And Bulk Soil	0.75%
Rhizosphere Soil	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil	0.75%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2199352024	Bare-fallow DEEP SOIL	Environmental	Open in IMG/M
3300000891	Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soil	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300003321	Sugarcane bulk soil Sample H1	Environmental	Open in IMG/M
3300003323	Sugarcane root Sample H1	Host-Associated	Open in IMG/M
3300003990	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Goodyear_PhragC_D2	Environmental	Open in IMG/M
3300004020	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleC_D2	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300004778	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare3Fresh	Environmental	Open in IMG/M
3300004781	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T0Bare2Fresh	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005874	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_0N_404	Environmental	Open in IMG/M
3300005885	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_10C_80N_401	Environmental	Open in IMG/M
3300005887	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_80N_403	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300010039	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300011431	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT157_2	Environmental	Open in IMG/M
3300011438	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT500_2	Environmental	Open in IMG/M
3300011444	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT800_2	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012668	Arctic soils microbial communities. Combined Assembly of 23 SPs	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012931	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaG	Environmental	Open in IMG/M
3300012937	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t5i015	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300014314	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_TuleA_D2	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300017695	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ540 (21.06) (version 2)	Environmental	Open in IMG/M
3300018000	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_coex	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018054	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1	Environmental	Open in IMG/M
3300018056	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_b1	Environmental	Open in IMG/M
3300018059	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_65_coex	Environmental	Open in IMG/M
3300018066	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_b1	Environmental	Open in IMG/M
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental	Open in IMG/M
3300018429	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018920	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 IS	Environmental	Open in IMG/M
3300021080	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo	Environmental	Open in IMG/M
3300021090	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_65_b1 redo	Environmental	Open in IMG/M
3300021413	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c1	Environmental	Open in IMG/M
3300021445	Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaG	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025313	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_3 (SPAdes)	Environmental	Open in IMG/M
3300025326	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 16_2 (SPAdes)	Environmental	Open in IMG/M
3300025538	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleC_D2 (SPAdes)	Environmental	Open in IMG/M
3300025552	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Goodyear_PhragC_D2 (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026020	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_80N_403 (SPAdes)	Environmental	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027716	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T0Bare2Fresh (SPAdes)	Environmental	Open in IMG/M
3300027735	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T0Bare1Fresh (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028718	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_194	Environmental	Open in IMG/M
3300028799	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_123	Environmental	Open in IMG/M
3300028803	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_120	Environmental	Open in IMG/M
3300028809	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_PalmiticAcid_Day48	Environmental	Open in IMG/M
3300031197 (restricted)	Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH1_T0_E1	Environmental	Open in IMG/M
3300031248 (restricted)	Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH5_T0_E5	Environmental	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031824	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2	Host-Associated	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300031965	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT100D185	Environmental	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032421	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NN3	Environmental	Open in IMG/M
3300033486	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_N3_C1_D5_A	Environmental	Open in IMG/M
3300034817	Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_1	Host-Associated	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
deeps_03562710	2199352024	Soil	MMALTLVTAIVSLVAWAVLIFGGITTSGVTHLLLALGTVLLVRWWALRG
JGI10214J12806_125450051	3300000891	Soil	MLPLTLAGAILALLAWAFIIFGGIATSGVTHLLLAVGTVLLVRWWALRA*
C688J35102_1199889072	3300002568	Soil	MLPQLSLIVSIVALVAWAFLIFGGVTTSGVTHLLLAVGTVLFVRWWALRA*
soilH1_100227973	3300003321	Sugarcane Root And Bulk Soil	MASTSLAPTLLAGLAALISWAILIFGGITSSGVTHLLLAVGTVLLVRWWALRT*
soilH1_100488493	3300003321	Sugarcane Root And Bulk Soil	MALLFVALAALVAWAILIFGGITTSGVTHLLLAVGTVLIVRWWALRA*
rootH1_102573972	3300003323	Sugarcane Root And Bulk Soil	MSALTLALAALVAWAILIFGGITTSGVTHLLLAVGTVLIVRWWALRA*
Ga0055455_100310763	3300003990	Natural And Restored Wetlands	MLSPLTLIVSIVALVAWAFLIFGGVTTSGVTHLLLAVGTVLFVRWWALRA*
Ga0055440_100137572	3300004020	Natural And Restored Wetlands	MPAPTFLAAIVAIVAWAILVFGGVTTSGVTHLLLALGAVLLVRWWALRA*
Ga0062590_1002030121	3300004157	Soil	MASTLLTPTLLAGLAALITWAWLIFGGVTTAGVTHLLLAVGSVLLVRWWALRA*
Ga0063356_1003663513	3300004463	Arabidopsis Thaliana Rhizosphere	MLPLTLAGAILALLAWAFLIFGGITTSGVTHLLLAVGTVLLVRWWALRA*
Ga0062595_1008196222	3300004479	Soil	MASTLLAPSLVAGVAALIIWAVLIFGGITSSGVTHLLLAVGTVLLVRWWALRA*
Ga0062595_1008225421	3300004479	Soil	MASTLLAPTLLAGLAALIIWAVLVYGGITSSGVTHLLLAVGTVLLVRWWALRG*
Ga0062595_1008853452	3300004479	Soil	MASTLLAPTLIAGVAALIMWAVLIFGGITSSGVTHLLLALGTVLLVRWWALRG*
Ga0062591_1010670662	3300004643	Soil	VILASTLLAPTLLAGAAALIAWAFLIFGGVTSSGVTHLLLAVGTVLLVRWWALRG*
Ga0062383_100703862	3300004778	Wetland Sediment	MLPLTLLGAIVALVAWAFIIFGGVATSGVTHLLLAIGTVLLVRWWALRA*
Ga0062379_100846012	3300004781	Wetland Sediment	MTKATLAGAIAALVAWAFLIFGGVTSAGVTHLLLAVGTVLLVRWWALRA*
Ga0066673_107853251	3300005175	Soil	MLALTLLVAIAALVAWALLIFGGVTTAGVTHLLLAVGIVLLVRWWALRA*
Ga0070709_101503111	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MMALTLVTAIVSLVAWAVLIFGGITTSGVTHLLLALGTVLLVRWWALRV*
Ga0070711_1000883842	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	VESTDEDEPIMASTLLAPTLIAGILALLAWAILIFGGITSSGVTHLLLAVGTVLLVRWWALRA*
Ga0070711_1007188661	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MMALTLVTAIVSLVAWAVLIFGGITTSGVTHLLLAVGTVLLVRWWALRV*
Ga0070705_1002534031	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MLPQLTLIVAIVALVAWAFLIFGGVTTSGVTHLLLAVGTVLFVRWWALRA*
Ga0070708_1001891702	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MLAPTLLLAIAALVAWALLIFGGVTTAGVTHLLLAVGIVLLVRWWALRA*
Ga0070663_1008226422	3300005455	Corn Rhizosphere	MLPQLTLIVSIAALLAWAFLIFGGVTTSGVTHLLLAVGTVLFVRWWALRA*
Ga0070681_100984901	3300005458	Corn Rhizosphere	MLPQLTLIVSIAALLAWAFLIFGGVTTSGVTHLLLAVGTVLFVRWW
Ga0070697_1005893072	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MALTLLAAIVSLAAWALLIFGGMTTSGVTHLLLAVGTVLLVRWWALRA*
Ga0070696_1017013491	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	VILASTLLAPTLLAGAAALIAWAFLIFGGVTSSGVTHLLLAVGTV
Ga0070693_1001085843	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	MMAPTLLTAVVALLAWVVLVFGRVTTSGVTHLLLAIAAVCFVRWWALRA*
Ga0066695_105459191	3300005553	Soil	MLAPTLLLAIAALVAWALLIFGGVTTAGVTHLLLAVGIVLLVRWWAL
Ga0070664_1013344492	3300005564	Corn Rhizosphere	MLPLTLAGAILALLAWAFLIFGGITTSGVTHLLLAVGTVL
Ga0070664_1021077182	3300005564	Corn Rhizosphere	MASTLLAPTLLAGLAALIAWAWLIFGGVTSAGVTHLLLAVGSVLLVRWWALRA*
Ga0068857_1012746021	3300005577	Corn Rhizosphere	MASTLLAPTLLAGLAALIAWAWLIFGGVTTSGVTHLLLAVGSVLLVRWWALRA*
Ga0066903_1073139962	3300005764	Tropical Forest Soil	QTESTDKAEPIMASTFVTPTLLAGILALLTWAILIFGGITSSGVTHLLLAVGTVLLVRWWALRA*
Ga0068863_1015140662	3300005841	Switchgrass Rhizosphere	LLAGLAALIAWAWLIFGGVTTSGVTHLLLAVGSVLLVRWWALRA*
Ga0068863_1024290672	3300005841	Switchgrass Rhizosphere	MASTLLTPTLLAGLAALITWAWLIFGGVTTAGVTHLLLAAGSVLLVRWWALRA*
Ga0075288_10794392	3300005874	Rice Paddy Soil	MLALTLLAAVASLVAWAVLIFGGVTTRPVTHLLLALGTILLVRWWALRD*
Ga0075284_10161922	3300005885	Rice Paddy Soil	MALLFVALAALVAWAVLIFGGIATSGATPLLLAVGTVLIVRWWALRA*
Ga0075292_10416002	3300005887	Rice Paddy Soil	MALLFVALTALVAWAVLIFGGITTSGATHLLLAVGTVLIVRWWALRA*
Ga0066656_101357912	3300006034	Soil	MLAPTLLVAIAALVAWALLIFGGVTTAGVTHLLLAVGIVLLVRWWALRA*
Ga0070712_1013666881	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MASTLLTSTLVAAITALVAWAFLIFGGLTTSGVTHLLLAVGSVLLVRWWALRA*
Ga0079222_100957502	3300006755	Agricultural Soil	MAPRLLGPTLFVAITALIAWAVLIFGGITSSGVTHLLLAVGTVLLVRWWALRV*
Ga0079222_101408413	3300006755	Agricultural Soil	ASTLLAPSLVAGVAALIIWAVLIFGGITSSGVTHLLLAVGTVLLVRWWALRA*
Ga0079222_107083522	3300006755	Agricultural Soil	MDEDERIMASTLLAPTLLAGLAALILWAVLVFGGITSSGVTHLLLAVGTVLLVRWWALRA
Ga0075430_1008603431	3300006846	Populus Rhizosphere	MAPTLLAALVALVAWAVLLFGGITTSGVTHLLLAIGTVLLVRWWALRA*
Ga0075431_1018971861	3300006847	Populus Rhizosphere	TLRIARTLIMAPTLLAALVALVAWAVLLFGGITTSGVTHLLLAIGTVLLVRWWALRA*
Ga0075433_100373415	3300006852	Populus Rhizosphere	MASTLLTPTLLTAIAALVAWALLIFGGVTSSGVTHLLLPVGTVLLVRWWALRA*
Ga0075425_1006137562	3300006854	Populus Rhizosphere	MASTLLTPTLLTAIAALVAWALLIFGGVASSGVTHLLLPVGTVLLVRWWALRA*
Ga0075434_1021874291	3300006871	Populus Rhizosphere	VILASTLLAPTLLAALVALLAWAILIFGGVTTSGVTHLLLAVGSVLLVRWWALRA*
Ga0079219_100029823	3300006954	Agricultural Soil	MASTLLAPSLLAGVAALIIWAVLIFGGITSSGVTHLLLAVGTVLLVRWWALRA*
Ga0075435_1012664393	3300007076	Populus Rhizosphere	VILASTLLAPTLLAALVALLAWAILIFGGVTTSGVTHLLLAVGSVLLVR
Ga0066710_1049029131	3300009012	Grasslands Soil	MLAPTLLVAIAALVAWALLIFGGVTTAGVTHLLLAVGIVLLVRWWALRA
Ga0099827_101299913	3300009090	Vadose Zone Soil	MPSLTLVAAVVALIAWAFLIFGGVATAGVTHLLLALGSVLLVRWWALRA*
Ga0075418_102839733	3300009100	Populus Rhizosphere	MAPTLLAALVALVAWAVLIFGGITTSGVTHLLLAIGTVLLVRWWALRA*
Ga0066709_1008733882	3300009137	Grasslands Soil	MPSLTLVAAVVALVAWAFLIFGGVTTAGVTHLLLALGSVLLVRWWALRA*
Ga0126309_101334542	3300010039	Serpentine Soil	MLPQLPLIVSIVALVAWAFLIFGGVTTSGVTHLLLAIGAVLFVRWWALRA*
Ga0126312_105256922	3300010041	Serpentine Soil	MAPTLLAAIVALLAWAVLLFGGITTSGVTHLLLAVGTILLVRWWALRA*
Ga0126312_106914312	3300010041	Serpentine Soil	MLLLTLLGAIIALVAWSFIIFGGVATSGVTHLLLAAGTVLLVRWWALRA*
Ga0126310_106503901	3300010044	Serpentine Soil	MASTLLLAIGALVAWTVLIFGSITTSGVTHLLLAVGTVLLVRWWALRA*
Ga0126311_118766151	3300010045	Serpentine Soil	MMLLTLFGGIAALVAWAFITFGGVAASGVTHLLLAVGTVLLVRWWALRA*
Ga0134128_130666711	3300010373	Terrestrial Soil	MASTLLAPSLVVGVAALIIWAVLIFGGITSSGVTHLLLAVGT
Ga0134126_106961862	3300010396	Terrestrial Soil	MRRMMAPTLLTAVVALLAWVVLVFGRVTTSGVTHLLLAIAAVCFVRWWALRA*
Ga0134124_112217651	3300010397	Terrestrial Soil	MASTLLAPTLLAGLAALIAWAWLIFGGVTTSGVTHLLLAVGSVLLVRWWALRACCCSGLRVPCG
Ga0137438_10216872	3300011431	Soil	MLPHLTLIVSIVALVAWAFLIFGGVTTSGVTHLLLAVGTVLFVRWWALRA*
Ga0137451_12289951	3300011438	Soil	MLPQLTLIVSIVALVAWAFLIFGGVTTSGVTHLLLAAGTVLLVRWWALRA*
Ga0137463_10238752	3300011444	Soil	MLPQLTLIVSIVALVAWAFLIFGGVTTSGVTHLLLAVGTVLFVRWWALRA*
Ga0137365_110536171	3300012201	Vadose Zone Soil	MPSLTLVAAVVALVTWAFLIFGGVTTAGVTHLLLALGSVLLVRWWALRA*
Ga0137374_106151921	3300012204	Vadose Zone Soil	MMAPTLLAAIAALVAWVLLIFGGVTTSGVTHLLLAVGTVLLVRWWALRA*
Ga0137376_113414142	3300012208	Vadose Zone Soil	MPSLTLVAALVALVTWAFLIFGGVTTAGVTHLLLALGSVLLVRWWALRA*
Ga0150985_1207404201	3300012212	Avena Fatua Rhizosphere	MMAPTLLMALAALLAWAVLIFGGITTAGVTHLLLAVGSVLLVRWWALRA*
Ga0137367_103966742	3300012353	Vadose Zone Soil	MPSLTLVAAVVALVAWAFLIFGGVTNAGVTHLLLALGSVLLVRWWALRA*
Ga0137369_108993051	3300012355	Vadose Zone Soil	MPSLTLVTAVVALVAWAFLIFGGVTTAGVTHLLLALGSVLLVRWWALRA*
Ga0157216_102189192	3300012668	Glacier Forefield Soil	MAPTLLLALVALIAWAVLLFGGVTTSGVTHLLLTAGTILLVRWWALRA*
Ga0137395_104321521	3300012917	Vadose Zone Soil	MPLLTLVAAVVALITWAFLIFGGVTTAGVTHLLLALGSVLLVRWWALRA
Ga0137404_116004041	3300012929	Vadose Zone Soil	MALTLLAAIISLVAWALLIFGGMTTSGVTHLLLAVGTVLLVRWWALRA*
Ga0153915_132022121	3300012931	Freshwater Wetlands	MLAPTLLAALVAIVAWAILVFAGITTAGVTHLLLALGTVLLVRWWALRA*
Ga0162653_1000439602	3300012937	Soil	MLPRLTLIVSIVALVAWAILIFGGVTTSGVTHLLLALGTVLFVRWWALRA
Ga0164303_100339431	3300012957	Soil	TAVILASTLLAPTLLAALVALLAWAILIFGGVTTSGVTHLLLAVGSVLLVRWWALRA*
Ga0164303_105225042	3300012957	Soil	MASTLLAPTLIAGILALLAWAILIFGGITSSGVTHLLLAVGTVLLVRWWALRA*
Ga0164303_113714851	3300012957	Soil	MASTLLAPTLLAGLAALIAWAFLVFGGVTTSGVTHLLLAVGSVLLVRWRALRA*
Ga0164299_102397792	3300012958	Soil	MASTLLALTLLAGLAALIAWAWLVFGGVTTSGVTHLLLAAGSVLLVRWWALRA*
Ga0164304_105245232	3300012986	Soil	MASTLLAPTLLAGLAALIAWAWLVFGGVTTSGVTHLLLAAGSVLLVRWWALRA*
Ga0164307_102459041	3300012987	Soil	LTFTLVAAITALVTWAFLIFGGLTTSGVTHLLLAVGSVLLVRWWALRA*
Ga0164305_117808421	3300012989	Soil	MASRLLAPTLLAGLAALIAWAFLVFGGVTTSGVTHLLLALGSVLLVRWWALRA*
Ga0075316_10185862	3300014314	Natural And Restored Wetlands	MLALTLLAAVASLVAWAVLIFGGVTTLPVTHLLLAVGTILLVRWWALRA*
Ga0132258_125766932	3300015371	Arabidopsis Rhizosphere	MASTLLTFTLVAAITALVTWAFLIFGGLTTSGVTHLLLAVGSVLLVRWWALRA*
Ga0180121_100571843	3300017695	Polar Desert Sand	MMAPTLLTAIVTLVAWTILVFGGVVTSGVTHLLLALGTVLLVRWWALRA
Ga0184604_101747302	3300018000	Groundwater Sediment	MLPQLTLIVSIVALVAWAFIIFGGVATSGVTHLLLAIGTVLLVRWWALRA
Ga0184604_102230272	3300018000	Groundwater Sediment	CDMMALTLLTAIIAIAAWAVLLFGGITTSGVTHLLLAVGTVLLVRWWALRA
Ga0184608_100150484	3300018028	Groundwater Sediment	MLPHLTLIVSIVALVAWAFLIFGGVTTSGVTHLLLAVGTVLFVRWWALRA
Ga0184621_101442461	3300018054	Groundwater Sediment	MLPHLTLIVSIVALVAWAFLIFGGVTTSGVTHLLLAVGTGLLVRLWALRA
Ga0184623_101565523	3300018056	Groundwater Sediment	MLPHLTLIVSIVALVAWAFLIFGGVTTSGVTHLLLAVGTVLLVRWWALRA
Ga0184615_107080151	3300018059	Groundwater Sediment	MLPLTLLGAIVALVAWAFIIFGGVATSGVTHLLLAISTVLFVRWWALRA
Ga0184617_10233031	3300018066	Groundwater Sediment	MLPQLTLIVSIVALVAWAFLIFGGVTTSGVTHLLLAVGTVLFVRWWALRA
Ga0184618_100515422	3300018071	Groundwater Sediment	MLPQLTLIVSIVALVAWGFLIFGGVTTSGVTHLLLAVGTVLFVRWWALRA
Ga0190272_102604441	3300018429	Soil	MLPHLTLIVSIVALVAWAFLIFGGVTTSGVTHSLLAVGTVLFVRWWALRA
Ga0190268_110269941	3300018466	Soil	MMAPTLLTAIVALVAWAVLIFGGLTTSGVTHLLLAVGTLLLVR
Ga0190273_102850782	3300018920	Soil	MLPLALSMTLPLTLLAGILALVAWAFIIFGGIAASGVTHLLLAVGTVLLVRWWALRA
Ga0210382_101631841	3300021080	Groundwater Sediment	MPSLTLVVAVVALIAWAFLIFGGVTTAGATHLLLALGSGLLVRWWALRA
Ga0210377_107893732	3300021090	Groundwater Sediment	MLPQLTLIVSLVALVAWAFLIFGGVTTSGVTHLLLAAGTVLLVRWWALRA
Ga0193750_10397981	3300021413	Soil	MLAPTLLIAIVALFAWAVLIFGGVTSAGVTHLLLAVGIVLLVRWWALRA
Ga0182009_104684181	3300021445	Soil	MASTLLAPTLLAGLAALIIWAVLVYGGITSSGVTHLLLAVGTVLLVRWWALRG
Ga0222622_102751821	3300022756	Groundwater Sediment	MLPQLTLIVSIVALVAWAFLIFGGVTSSGVTHLLLAVGTVLLVRWWALRA
Ga0209431_112432662	3300025313	Soil	MTKATLAGAIAALVAWAFLIFGGVTDSGVTHLLLAVGSVLLVRWWALRA
Ga0209342_106384411	3300025326	Soil	MTKATLAGAIAALVAWAFLIFGGVTDSGVTHLLLAVGSVLLVRWWALR
Ga0210132_10283722	3300025538	Natural And Restored Wetlands	MPAPTFLAAIVAIVAWAILVFGGVTTSGVTHLLLALGAVLLVRWWALRA
Ga0210142_10044801	3300025552	Natural And Restored Wetlands	MLSPLTLIVSIVALVAWAFLIFGGVTTSGVTHLLLAVGTVLFVRWWALRA
Ga0207684_113618252	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MLAPTLLLAIAALVAWALLIFGGVTTAGVTHLLLAVGIVLLVRWW
Ga0207665_106865161	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MLAPTLLVAIAALVAWAWLIFGGVTTAAVTHLLLAVGIVLLVRWWALRA
Ga0207679_120529801	3300025945	Corn Rhizosphere	MASTLLAPTLLAGLAALIAWAWLIFGGVTSAGVTHLLLAVGSVLLVRWWALRA
Ga0208531_10008381	3300026020	Rice Paddy Soil	MALLFVALTALVAWAVLIFGGITTSGATHLLLAVGTVLIVRWWALRA
Ga0207641_113804132	3300026088	Switchgrass Rhizosphere	WIMASTLLAPTLLAGLAALIAWAWLIFGGVTTSGVTHLLLAVGSVLLVRWWALRA
Ga0207676_100865332	3300026095	Switchgrass Rhizosphere	MASTLLAPTLLAGLAALIAWAWLIFGGVTTSGVTHLLLAVGSVLLVRWWALRA
Ga0209682_100026166	3300027716	Wetland Sediment	MTKATLVGAIAALVAWAFLIFGGVTSAGVTHLLLAVGTVLLVRWWALRA
Ga0209261_100562901	3300027735	Wetland Sediment	MTKATLAGAIAALVAWAFLIFGGVTSAGVTHLLLAVGTVLLVRWWALRA
Ga0209590_106466661	3300027882	Vadose Zone Soil	MPSLTLVAAVVALIAWAFLIFGGVATAGVTHLLLALGSVLLVRWWALRA
Ga0268265_125239211	3300028380	Switchgrass Rhizosphere	MLPQLSLIVSIVALVAWAFLIFGGVTTSGVTHLLLAVGTVLFVRWWALRA
Ga0307307_100518242	3300028718	Soil	SERGVYMPSLTLIAAVVALVVWAFLIFGGVTTAGVTHLLLAVGSVLLVRWWALRA
Ga0307284_103434711	3300028799	Soil	MPSLTLIAAVVALVVWAFLIFGGVTTAGVTHLLLAVGSVLLVRWWALRA
Ga0307281_104159691	3300028803	Soil	MLPQLTLIVSLVALVAWAFLIFGGVTTSGVTHLLLAAGTVLFVRWWALRA
Ga0247824_101350492	3300028809	Soil	MMSLTLLGGIAALVAWAFIIFGGVATSGVTHLLLAVGTVLLVRWWALRA
(restricted) Ga0255310_102310061	3300031197	Sandy Soil	MLALTLLGAIVALVAWVVLVFGGVSSSGVTHLLLAAGTMLFVRWWALRA
(restricted) Ga0255312_11231331	3300031248	Sandy Soil	MLALTLLGAIVALVAWVILVFGGVSSSGVTHLLLAAGTMLFVRWWALRA
(restricted) Ga0255312_11709222	3300031248	Sandy Soil	MLPQLTLIVAIVALVAWAFLIFGGVTTSGVTHLLLAVGTVLFVR
Ga0307408_1010339002	3300031548	Rhizosphere	MLLLTLIAAIAALVAWSFIIFGGVSSAGVTHLLLALGTVLLVRWWALRA
Ga0307408_1016181952	3300031548	Rhizosphere	MSALTLVASVASLAAWALLIFGGVTTAAVTHLLLAAGTILFVRWWALRA
Ga0307408_1021222851	3300031548	Rhizosphere	MLPLTLAGAILALLAWAFLIFGGITTSGVTHLLLAVGTVLLVRWWALRA
Ga0307413_118492481	3300031824	Rhizosphere	MLALTLLAAVVSLVVWAVLIFGGVTTLPITHLLLAIGTILFVRWWALRA
Ga0307413_121672761	3300031824	Rhizosphere	MLLLTLIAAVAALVAWSFIIFGGVSSAGVTHLLLALGTVLLVRWWALRA
Ga0308175_1000120488	3300031938	Soil	MESTDEDEPIMASTLLAPTLLAGLTALILWAVLIFGGITSSGVTHLLLAVGTVLLVRWWALRG
Ga0326597_110091321	3300031965	Soil	MTTATLPAAIAALVAWAFLIFGGVTDSGVTHLLLAVGSVLLVRWWALRA
Ga0307416_1000679892	3300032002	Rhizosphere	MSALTLVASVASLAAWALLIFSGVTTAAVTHLLLAAGTILLVRWWALRA
Ga0310812_100695532	3300032421	Soil	MASTLLAPTLLAGLAALIAWAWLIFGGVTSAGVTPLLLAVGSVLLVRWWALRA
Ga0316624_120525992	3300033486	Soil	LAPTLLAALVAIVAWAILVFGGITTAGVTHLLLALGTVLLVRWWALRA
Ga0373948_0195800_105_257	3300034817	Rhizosphere Soil	MLPQLTLIISIVALVAWAFLIFGGVTTSGVTHLLLAVGTVLFVRWWALRA

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.75
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.75
Powered by PDBe Molstar

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters