Metagenome / Metatranscriptome Family F060146

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F060146
Family Type	Metagenome / Metatranscriptome
Number of Sequences	133
Average Sequence Length	56 residues
Representative Sequence	EIAGFTVGQPHEIPGLVAGHIEAGADEVIFSFAFADTAGITAVGQAFGLGGQ
Number of Associated Samples	115
Number of Associated Scaffolds	133

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	6.98 %
% of genes near scaffold ends (potentially truncated)	90.23 %
% of genes from short scaffolds (< 2000 bps)	89.47 %
Associated GOLD sequencing projects	104
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.59

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (51.128 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil (13.534 % of family members)
Environment Ontology (ENVO)	Unclassified (28.571 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (59.398 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 28.75% β-sheet: 0.00% Coil/Unstructured: 71.25%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.59
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.59
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 133 Family Scaffolds
PF01411	tRNA-synt_2c	6.77
PF02358	Trehalose_PPase	2.26
PF11746	DUF3303	2.26
PF03190	Thioredox_DsbH	2.26
PF01047	MarR	2.26
PF03358	FMN_red	2.26
PF00496	SBP_bac_5	1.50
PF00903	Glyoxalase	1.50
PF00211	Guanylate_cyc	1.50
PF08031	BBE	1.50
PF00248	Aldo_ket_red	1.50
PF14026	DUF4242	1.50
PF07366	SnoaL	1.50
PF06262	Zincin_1	1.50
PF16925	TetR_C_13	1.50
PF00296	Bac_luciferase	0.75
PF04672	Methyltransf_19	0.75
PF04198	Sugar-bind	0.75
PF11716	MDMPI_N	0.75
PF05544	Pro_racemase	0.75
PF09339	HTH_IclR	0.75
PF11852	Pullul_strch_C	0.75
PF02913	FAD-oxidase_C	0.75
PF01425	Amidase	0.75
PF03976	PPK2	0.75
PF00501	AMP-binding	0.75
PF00196	GerE	0.75
PF13561	adh_short_C2	0.75
PF13828	DUF4190	0.75
PF12802	MarR_2	0.75
PF12680	SnoaL_2	0.75
PF02775	TPP_enzyme_C	0.75
PF05977	MFS_3	0.75
PF00440	TetR_N	0.75
PF00557	Peptidase_M24	0.75
PF01300	Sua5_yciO_yrdC	0.75
PF07969	Amidohydro_3	0.75
PF01715	IPPT	0.75
PF08659	KR	0.75
PF02776	TPP_enzyme_N	0.75

COG ID	Name	Functional Category	% Frequency in 133 Family Scaffolds
COG0013	Alanyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	6.77
COG1331	Uncharacterized conserved protein YyaL, SSP411 family, contains thoiredoxin and six-hairpin glycosidase-like domains	General function prediction only [R]	2.26
COG1877	Trehalose-6-phosphate phosphatase	Carbohydrate transport and metabolism [G]	2.26
COG0277	FAD/FMN-containing lactate dehydrogenase/glycolate oxidase	Energy production and conversion [C]	2.26
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	1.50
COG3824	Predicted Zn-dependent protease, minimal metalloprotease (MMP)-like domain	Posttranslational modification, protein turnover, chaperones [O]	1.50
COG0324	tRNA A37 N6-isopentenylltransferase MiaA	Translation, ribosomal structure and biogenesis [J]	0.75
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	0.75
COG2326	Polyphosphate kinase 2, PPK2 family	Energy production and conversion [C]	0.75
COG2390	DNA-binding transcriptional regulator LsrR, DeoR family	Transcription [K]	0.75
COG2814	Predicted arabinose efflux permease AraJ, MFS family	Carbohydrate transport and metabolism [G]	0.75
COG3938	Proline racemase/hydroxyproline epimerase	Amino acid transport and metabolism [E]	0.75
COG0154	Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase	Translation, ribosomal structure and biogenesis [J]	0.75

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	51.13 %
Unclassified	root	N/A	48.87 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	51.13 %
Unclassified	root	N/A	48.87 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	51.13 %
Unclassified	root	N/A	48.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.87 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	42.11 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.87 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	35.34 %
Candidatus Dormibacteraeota	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Candidatus Dormibacteraeota	0.75 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.75 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.87 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	21.05 %
Acidimicrobiia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	1.50 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.75 %
unclassified Candidatus Dormibacteraeota	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Candidatus Dormibacteraeota → unclassified Candidatus Dormibacteraeota	0.75 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.87 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	4.51 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	2.26 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	1.50 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	1.50 %
Acidimicrobiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales	1.50 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.75 %
Candidatus Dormibacteraeota bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Candidatus Dormibacteraeota → unclassified Candidatus Dormibacteraeota → Candidatus Dormibacteraeota bacterium	0.75 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.75 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	0.75 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.87 %
Treboniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae	3.01 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	2.26 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.50 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	1.50 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	1.50 %
Acidimicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae	1.50 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	0.75 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.75 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.75 %
Candidatus Dormibacteraeota bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Candidatus Dormibacteraeota → unclassified Candidatus Dormibacteraeota → Candidatus Dormibacteraeota bacterium	0.75 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.87 %
Trebonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia	3.01 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	2.26 %
Aciditerrimonas	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → Aciditerrimonas	1.50 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.50 %
Actinoplanes	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes	0.75 %
Nonomuraea	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Nonomuraea	0.75 %
Saccharopolyspora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharopolyspora	0.75 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	0.75 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.75 %
Candidatus Dormibacteraeota bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Candidatus Dormibacteraeota → unclassified Candidatus Dormibacteraeota → Candidatus Dormibacteraeota bacterium	0.75 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.87 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	3.01 %
Aciditerrimonas ferrireducens	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → Aciditerrimonas → Aciditerrimonas ferrireducens	1.50 %
unclassified Streptomyces	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces	1.50 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.50 %
Actinoplanes digitatis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes → Actinoplanes digitatis	0.75 %
Saccharopolyspora shandongensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharopolyspora → Saccharopolyspora shandongensis	0.75 %
Nonomuraea	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Nonomuraea	0.75 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	0.75 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.75 %
Candidatus Dormibacteraeota bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Candidatus Dormibacteraeota → unclassified Candidatus Dormibacteraeota → Candidatus Dormibacteraeota bacterium	0.75 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.87 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	3.01 %
Aciditerrimonas ferrireducens	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → Aciditerrimonas → Aciditerrimonas ferrireducens	1.50 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.50 %
Streptomyces sp. WAC07061	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. WAC07061	0.75 %
Streptomyces sp. WM6372	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. WM6372	0.75 %
Actinoplanes digitatis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes → Actinoplanes digitatis	0.75 %
Saccharopolyspora shandongensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharopolyspora → Saccharopolyspora shandongensis	0.75 %
Nonomuraea	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Nonomuraea	0.75 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	0.75 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.75 %
Candidatus Dormibacteraeota bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Candidatus Dormibacteraeota → unclassified Candidatus Dormibacteraeota → Candidatus Dormibacteraeota bacterium	0.75 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	0.75 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001408\|JGI20206J14855_1034714	Not Available	757	Open in IMG/M
3300003368\|JGI26340J50214_10102808	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	732	Open in IMG/M
3300004082\|Ga0062384_101100057	Not Available	573	Open in IMG/M
3300004082\|Ga0062384_101395129	Not Available	516	Open in IMG/M
3300004152\|Ga0062386_101210994	Not Available	628	Open in IMG/M
3300004463\|Ga0063356_106024778	Not Available	520	Open in IMG/M
3300005434\|Ga0070709_10912085	Not Available	695	Open in IMG/M
3300005435\|Ga0070714_101053177	Not Available	792	Open in IMG/M
3300005467\|Ga0070706_100070352	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3236	Open in IMG/M
3300005536\|Ga0070697_102068694	Not Available	510	Open in IMG/M
3300005712\|Ga0070764_10001182	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	11212	Open in IMG/M
3300005712\|Ga0070764_11088096	Not Available	506	Open in IMG/M
3300005764\|Ga0066903_106680135	Not Available	600	Open in IMG/M
3300006176\|Ga0070765_101330311	Not Available	677	Open in IMG/M
3300006573\|Ga0074055_11441382	Not Available	516	Open in IMG/M
3300006804\|Ga0079221_10149682	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1219	Open in IMG/M
3300009090\|Ga0099827_10964894	All Organisms → cellular organisms → Bacteria	739	Open in IMG/M
3300009090\|Ga0099827_11691606	Not Available	551	Open in IMG/M
3300009520\|Ga0116214_1015637	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2694	Open in IMG/M
3300009520\|Ga0116214_1236005	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	693	Open in IMG/M
3300009522\|Ga0116218_1159023	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1025	Open in IMG/M
3300009523\|Ga0116221_1456781	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	558	Open in IMG/M
3300009524\|Ga0116225_1158300	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1032	Open in IMG/M
3300009672\|Ga0116215_1148833	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1040	Open in IMG/M
3300009698\|Ga0116216_10684612	All Organisms → cellular organisms → Bacteria	616	Open in IMG/M
3300009839\|Ga0116223_10090213	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1948	Open in IMG/M
3300010048\|Ga0126373_10435384	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1343	Open in IMG/M
3300010366\|Ga0126379_12253810	Not Available	645	Open in IMG/M
3300010379\|Ga0136449_101388016	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1086	Open in IMG/M
3300011107\|Ga0151490_1066061	Not Available	632	Open in IMG/M
3300012096\|Ga0137389_11014613	Not Available	711	Open in IMG/M
3300012189\|Ga0137388_11436564	Not Available	628	Open in IMG/M
3300012208\|Ga0137376_11473940	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Candidatus Dormibacteraeota → unclassified Candidatus Dormibacteraeota → Candidatus Dormibacteraeota bacterium	571	Open in IMG/M
3300012209\|Ga0137379_10094299	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2879	Open in IMG/M
3300012210\|Ga0137378_11631982	Not Available	553	Open in IMG/M
3300012349\|Ga0137387_11229930	All Organisms → cellular organisms → Bacteria	527	Open in IMG/M
3300012359\|Ga0137385_11423599	Not Available	557	Open in IMG/M
3300012361\|Ga0137360_11129973	Not Available	677	Open in IMG/M
3300012363\|Ga0137390_10538170	Not Available	1139	Open in IMG/M
3300012971\|Ga0126369_12566883	Not Available	594	Open in IMG/M
3300014489\|Ga0182018_10455018	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	680	Open in IMG/M
3300014501\|Ga0182024_10830290	Not Available	1122	Open in IMG/M
3300014501\|Ga0182024_11680361	All Organisms → cellular organisms → Bacteria	716	Open in IMG/M
3300014658\|Ga0181519_10982481	Not Available	524	Open in IMG/M
3300014838\|Ga0182030_10338635	Not Available	1620	Open in IMG/M
3300016319\|Ga0182033_11808177	Not Available	555	Open in IMG/M
3300016445\|Ga0182038_10301604	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → Aciditerrimonas → Aciditerrimonas ferrireducens	1310	Open in IMG/M
3300017821\|Ga0187812_1009090	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharopolyspora → Saccharopolyspora shandongensis	3445	Open in IMG/M
3300017928\|Ga0187806_1023159	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1809	Open in IMG/M
3300017928\|Ga0187806_1388532	Not Available	502	Open in IMG/M
3300017932\|Ga0187814_10023990	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2283	Open in IMG/M
3300017932\|Ga0187814_10321617	Not Available	594	Open in IMG/M
3300017942\|Ga0187808_10133306	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1090	Open in IMG/M
3300017942\|Ga0187808_10606465	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. WM6372	508	Open in IMG/M
3300017946\|Ga0187879_10156836	Not Available	1286	Open in IMG/M
3300017955\|Ga0187817_10370539	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	914	Open in IMG/M
3300017959\|Ga0187779_10391822	Not Available	904	Open in IMG/M
3300017959\|Ga0187779_10881979	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	615	Open in IMG/M
3300017959\|Ga0187779_11384299	Not Available	500	Open in IMG/M
3300017961\|Ga0187778_10716247	Not Available	678	Open in IMG/M
3300017961\|Ga0187778_11127280	Not Available	547	Open in IMG/M
3300017970\|Ga0187783_10288169	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1198	Open in IMG/M
3300017970\|Ga0187783_11231017	Not Available	539	Open in IMG/M
3300017972\|Ga0187781_10791394	Not Available	688	Open in IMG/M
3300017975\|Ga0187782_11525738	Not Available	527	Open in IMG/M
3300018007\|Ga0187805_10202282	All Organisms → cellular organisms → Bacteria → Terrabacteria group	907	Open in IMG/M
3300018035\|Ga0187875_10244693	Not Available	980	Open in IMG/M
3300018058\|Ga0187766_10264341	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1104	Open in IMG/M
3300018060\|Ga0187765_10193810	Not Available	1170	Open in IMG/M
3300018064\|Ga0187773_10504146	Not Available	722	Open in IMG/M
3300018085\|Ga0187772_10092365	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1937	Open in IMG/M
3300018086\|Ga0187769_10990124	Not Available	636	Open in IMG/M
3300018090\|Ga0187770_10144867	Not Available	1806	Open in IMG/M
3300019787\|Ga0182031_1089236	Not Available	733	Open in IMG/M
3300020581\|Ga0210399_10789898	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	776	Open in IMG/M
3300021178\|Ga0210408_10679708	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes → Actinoplanes digitatis	812	Open in IMG/M
3300021180\|Ga0210396_10827759	Not Available	793	Open in IMG/M
3300021404\|Ga0210389_10861719	All Organisms → cellular organisms → Bacteria → Terrabacteria group	706	Open in IMG/M
3300022522\|Ga0242659_1006593	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1512	Open in IMG/M
3300022533\|Ga0242662_10271526	All Organisms → cellular organisms → Bacteria → Terrabacteria group	557	Open in IMG/M
3300024227\|Ga0228598_1071122	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	696	Open in IMG/M
3300025634\|Ga0208589_1031379	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1443	Open in IMG/M
3300025929\|Ga0207664_10921256	Not Available	784	Open in IMG/M
3300026489\|Ga0257160_1017925	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. WAC07061	1093	Open in IMG/M
3300027029\|Ga0208731_1039129	Not Available	521	Open in IMG/M
3300027604\|Ga0208324_1022535	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1934	Open in IMG/M
3300027662\|Ga0208565_1029652	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1873	Open in IMG/M
3300027684\|Ga0209626_1182012	All Organisms → cellular organisms → Bacteria → Terrabacteria group	557	Open in IMG/M
3300027703\|Ga0207862_1256123	Not Available	512	Open in IMG/M
3300027725\|Ga0209178_1271930	Not Available	617	Open in IMG/M
3300027854\|Ga0209517_10059862	All Organisms → cellular organisms → Bacteria	2788	Open in IMG/M
3300027882\|Ga0209590_10087239	All Organisms → cellular organisms → Bacteria	1836	Open in IMG/M
3300027889\|Ga0209380_10573277	All Organisms → cellular organisms → Bacteria	655	Open in IMG/M
3300027911\|Ga0209698_11365397	All Organisms → cellular organisms → Bacteria → Nitrospirae	517	Open in IMG/M
3300027986\|Ga0209168_10197307	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1008	Open in IMG/M
3300028762\|Ga0302202_10176957	All Organisms → cellular organisms → Bacteria	1116	Open in IMG/M
3300028783\|Ga0302279_10249586	Not Available	805	Open in IMG/M
3300029943\|Ga0311340_10982448	Not Available	695	Open in IMG/M
3300030007\|Ga0311338_10545741	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1205	Open in IMG/M
3300030007\|Ga0311338_12036203	Not Available	509	Open in IMG/M
3300030494\|Ga0310037_10149521	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1060	Open in IMG/M
3300030494\|Ga0310037_10264203	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	742	Open in IMG/M
3300030524\|Ga0311357_10699589	All Organisms → cellular organisms → Bacteria	921	Open in IMG/M
3300030659\|Ga0316363_10212931	Not Available	800	Open in IMG/M
3300030707\|Ga0310038_10097557	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1541	Open in IMG/M
3300030707\|Ga0310038_10108120	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1441	Open in IMG/M
3300030813\|Ga0265750_1005868	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1309	Open in IMG/M
3300031090\|Ga0265760_10111829	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	871	Open in IMG/M
3300031090\|Ga0265760_10366119	Not Available	517	Open in IMG/M
3300031128\|Ga0170823_12403639	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	575	Open in IMG/M
3300031258\|Ga0302318_10111767	Not Available	1234	Open in IMG/M
3300031572\|Ga0318515_10709949	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Nonomuraea	532	Open in IMG/M
3300031672\|Ga0307373_10069108	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3368	Open in IMG/M
3300031708\|Ga0310686_104564211	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1018	Open in IMG/M
3300031708\|Ga0310686_113651977	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	742	Open in IMG/M
3300031753\|Ga0307477_10389311	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	956	Open in IMG/M
3300031765\|Ga0318554_10852375	Not Available	509	Open in IMG/M
3300031769\|Ga0318526_10287185	Not Available	673	Open in IMG/M
3300031782\|Ga0318552_10676812	Not Available	526	Open in IMG/M
3300031798\|Ga0318523_10673351	Not Available	508	Open in IMG/M
3300031821\|Ga0318567_10832512	Not Available	523	Open in IMG/M
3300031910\|Ga0306923_10309287	All Organisms → cellular organisms → Bacteria	1805	Open in IMG/M
3300032055\|Ga0318575_10054495	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → Aciditerrimonas → Aciditerrimonas ferrireducens	1843	Open in IMG/M
3300032064\|Ga0318510_10238511	Not Available	744	Open in IMG/M
3300032064\|Ga0318510_10513824	Not Available	520	Open in IMG/M
3300032160\|Ga0311301_10401014	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2100	Open in IMG/M
3300032261\|Ga0306920_103744498	Not Available	557	Open in IMG/M
3300032898\|Ga0335072_10352118	All Organisms → cellular organisms → Bacteria	1612	Open in IMG/M
3300032954\|Ga0335083_10023169	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	7086	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.50%
Host-Associated	Host-Associated	1.50%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	84.21%
Aquatic	Environmental → Aquatic	14.29%
Plants	Host-Associated → Plants	1.50%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	78.20%
Freshwater	Environmental → Aquatic → Freshwater	13.53%
Peat	Environmental → Terrestrial → Peat	6.02%
Sediment	Environmental → Aquatic → Sediment	0.75%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.75%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.75%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	50.38%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	17.29%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	13.53%
Loam	Environmental → Terrestrial → Soil → Loam	9.77%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	6.02%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.75%
Clay	Environmental → Terrestrial → Soil → Clay	0.75%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.75%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.75%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	30.83%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	16.54%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	12.78%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	6.77%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	6.02%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.02%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	6.02%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	4.51%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.76%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.50%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	1.50%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.75%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.75%
Unclassified	Environmental → Terrestrial → Soil → Clay → Unclassified	0.75%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.75%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.75%

Habitat	Taxonomy	Distribution
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	13.53%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	12.03%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	11.28%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	9.02%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	6.77%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	3.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.01%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	3.01%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	3.01%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.26%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.26%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	2.26%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	1.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.50%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.50%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	1.50%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.50%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	1.50%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	1.50%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	1.50%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.50%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.50%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.50%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.75%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.75%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.75%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.75%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.75%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.75%
Soil	Environmental → Terrestrial → Soil → Clay → Unclassified → Soil	0.75%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.75%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.75%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.75%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001408	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F52-2 deep-092012	Environmental	Open in IMG/M
3300003368	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006573	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAC (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009520	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaG	Environmental	Open in IMG/M
3300009522	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG	Environmental	Open in IMG/M
3300009523	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaG	Environmental	Open in IMG/M
3300009524	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG	Environmental	Open in IMG/M
3300009672	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_2_FS metaG	Environmental	Open in IMG/M
3300009698	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG	Environmental	Open in IMG/M
3300009839	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300011107	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAC (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300014489	Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaG	Environmental	Open in IMG/M
3300014495	Permafrost microbial communities from Stordalen Mire, Sweden - 712P3M metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014658	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_10_metaG	Environmental	Open in IMG/M
3300014838	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017821	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_2	Environmental	Open in IMG/M
3300017928	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_1	Environmental	Open in IMG/M
3300017932	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_4	Environmental	Open in IMG/M
3300017942	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018007	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5	Environmental	Open in IMG/M
3300018035	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_10	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300018064	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_10_MG	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300019787	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (PacBio error correction)	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300022522	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-11-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022533	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-7-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300024227	Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU4	Host-Associated	Open in IMG/M
3300025412	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_10 (SPAdes)	Environmental	Open in IMG/M
3300025634	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-2 shallow-092012 (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300026489	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-11-A	Environmental	Open in IMG/M
3300027029	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF045 (SPAdes)	Environmental	Open in IMG/M
3300027604	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG (SPAdes)	Environmental	Open in IMG/M
3300027662	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_2_FS metaG (SPAdes)	Environmental	Open in IMG/M
3300027684	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027703	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 81 (SPAdes)	Environmental	Open in IMG/M
3300027725	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200 (SPAdes)	Environmental	Open in IMG/M
3300027854	Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300027986	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300028762	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N3_3	Environmental	Open in IMG/M
3300028783	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N3_3	Environmental	Open in IMG/M
3300029943	I_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300030007	I_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300030494	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG (v2)	Environmental	Open in IMG/M
3300030524	II_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300030659	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG (v2)	Environmental	Open in IMG/M
3300030707	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG (v2)	Environmental	Open in IMG/M
3300030813	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSE1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031090	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031128	Oak Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031258	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_1	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031672	Soil microbial communities from Risofladan, Vaasa, Finland - OX-2	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031769	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f24	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental	Open in IMG/M
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental	Open in IMG/M
3300033829	Peat soil microbial communities from Stordalen Mire, Sweden - 715 P2 1-5	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI20206J14855_10347141	3300001408	Arctic Peat Soil	EMRELLAASVPAGEISGFTVGQPHEIPGLIAGHIEAGADEVIFSVPFADAAAITAVAEAFRLNAH*
JGI26340J50214_101028081	3300003368	Bog Forest Soil	GSAEEIAGFTVGQPHEIPGLVAGHIEVGADEVIFSFPFADTAGITAVGEAFGLGGQ*
Ga0062384_1011000571	3300004082	Bog Forest Soil	AEVRQMVEASSSPEEVAAFLIGQPHEIPDQVAGHLMAGADEVIFSFAFADAAGIAAVGEAFGLTDSV*
Ga0062384_1013951291	3300004082	Bog Forest Soil	IAGFTVGQPHEIPGLVAGHIKAGADEVIFSFPFADTAAITAVGEVFGLGGQ*
Ga0062387_1005356691	3300004091	Bog Forest Soil	TREMVAASGSPEEVAGFTIGQPHEVPDLIAGHLAAGADEVLFSFPFADDRAITEVAGALSLHPLS*
Ga0062386_1012109942	3300004152	Bog Forest Soil	EQEIAGFTVGQPHEIPGLVAGHIEAGADEVIFSFPFADTTGITAVGEAFGLRGQ*
Ga0063356_1060247781	3300004463	Arabidopsis Thaliana Rhizosphere	AEQIAGFTVGQPHEIPGLVAGHIEAGADEVIFSSAFADTAGITAVGQAFGLGAR*
Ga0070709_109120851	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	TETAGFTVGQPHEIPDLIAGHIEAGADEVIFSVPFADASAIRAMGESLGLGTA*
Ga0070714_1010531772	3300005435	Agricultural Soil	MMNDLRRNWLLCAETRELLASVMPAEETAGFTIGQPHGIPGLVAGHIEAGADEVIFSLPFADAAGI
Ga0070706_1000703524	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	GSAEEIAGFTVGQPHEIPGLVAGHIEAGADEVIFSFAFADTAGITAVGEAFGLGRR*
Ga0070697_1020686941	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	EIAGFTVGQPHEIPGLVAGHIEAGADEVIFSFAFADTAGITAVGQAFGLGGQ*
Ga0070764_1000118215	3300005712	Soil	AGFTVGQPHEIPGLVAGHIEAGADEVIFSFAFADTDGIAAVAQAFGLSAG*
Ga0070764_110880961	3300005712	Soil	GFTVGQPHEIPDLVAGHIEAGAEEVIFSFAFADPAGIGAVGEAFGLGAS*
Ga0066903_1066801352	3300005764	Tropical Forest Soil	ENTEETKAMLSAAAGEEAGQFSVGQPTDIPGLVAGHIDAGVDEVIFSFPFATAADIRAVGEACLTPA*
Ga0070765_1013303111	3300006176	Soil	REMVAAAVPAEQIAGFTIGQPHEIPGLVAGHIEAGADEVIFSFAFADTAGITAVGEAFGLGRQ*
Ga0074055_114413821	3300006573	Soil	VREMLAAAASAEEIAGFTVGQPHEIPGLVAGHIEAGADEVIFSFAFADAAGITAVGQAFGLGAR*
Ga0079221_101496821	3300006804	Agricultural Soil	EVHEMLAAAASPEEIAGFTVGQPHEIPGLVAGHIEAGADEVIFSFAFADGAGISALGKAFGLAGH*
Ga0099827_109648941	3300009090	Vadose Zone Soil	MCNVTGDVSTLAGPAEEIAGFTVGQPREIPGLLAGHIEAGADEVIFSFPFADTAGITAVGKAFGLGGQ*
Ga0099827_116916061	3300009090	Vadose Zone Soil	REMLAAAGSAEEIAGFTVGQPHEIPGLVAGHIEAGADEVIFSFPFADTAGITAVGQAFGLGGQ*
Ga0116214_10156373	3300009520	Peatlands Soil	GSAGEIAGFTVGQPHEIPGLVAGHIEAGADEVIFSFPFADTAGITAVGEAFGLGGQ*
Ga0116214_12360051	3300009520	Peatlands Soil	GSAGEIAGFTVGQPHEIPGLVAGHIEAGADEVIFSFPFADIAGITAVGEAFGLGGQ*
Ga0116218_11590231	3300009522	Peatlands Soil	AGFTVGQPHEIPGLVAGHIEAGADEVIFSFPFADTAGITAVGEAFGLGGQ*
Ga0116221_14567812	3300009523	Peatlands Soil	REMLAAGGGSAGEIAGFTIGQPHEIPGLVAGHIEAGADEVIFSLPFADAAGITGVAEAFGLRGQ*
Ga0116225_11583001	3300009524	Peatlands Soil	EIAGFTIGQPHEVPGLVAGHIEAGADEVIFSFPFADTAGITAVGEAFGLGGQ*
Ga0116215_11488332	3300009672	Peatlands Soil	EMLAAGGGSAGEIAGFTIGQPHEIPGLVAGHIEAGADEVIFSFPFADTAGITAVGEAFGLGGQ*
Ga0116216_106846121	3300009698	Peatlands Soil	GFTVGQPHEIPDLVADHIGAGADEVIFSFAFADEAGIAAVGEAFGLGGMPAQ*
Ga0116223_100902131	3300009839	Peatlands Soil	FTVGQPHEIPGLVAGHIEAGADEVIFSFPFADTAGITAVGEAFGLGGQ*
Ga0126373_104353841	3300010048	Tropical Forest Soil	IGQPHEIPALVAGHIEAGATEVIFSVPFAGAEGIAAVAEAFGLRRS*
Ga0126379_122538101	3300010366	Tropical Forest Soil	EEIAGFTVGQPHEIPGLVAGHIEAGADEVIFSFAFADTAGIRAVGEALGLARQ*
Ga0136449_1013880161	3300010379	Peatlands Soil	EIAGFTVGQPHEIPGLVAGHIEAGADEVIFSLPFADAAGITGVAEAFGLRGQ*
Ga0151490_10660612	3300011107	Soil	AAGPAEQIAGFTVGQPHEIPGLVAGHIEAGADEVIFSSAFADTAGITAVGQAFGLGAR*
Ga0137389_110146132	3300012096	Vadose Zone Soil	REMLAAAGSAEEIAGFTVGQPDEIPSLVAGHIEAGADEVIFSFAFADAAGITAVGEALGLRGQ*
Ga0137388_114365642	3300012189	Vadose Zone Soil	AAAGSAEEIAGFTVGQPDEIPSLVAGHIEAGADEVIFSFAFADAAGITAVGEALGLRGQ*
Ga0137376_114739401	3300012208	Vadose Zone Soil	TREMLTAVGSAEEIAGFTVGQPHEIPGLVAGHIEAGADEVIFSFPFADTAGITAVAEAFGLGRQ*
Ga0137379_100942991	3300012209	Vadose Zone Soil	MCNVTGDVSTPAGSAEEIAGFTVGQPREIPGLLAGHIEAGADEVIFSFPFADTAGITAVGKAFGLGGQ*
Ga0137378_116319822	3300012210	Vadose Zone Soil	FTVGQPHEIPGLVAGHIEAGADDVIFSFAFADAAGITAVGEAFGLGGQ*
Ga0137387_112299301	3300012349	Vadose Zone Soil	MCNVTGDVSTPAGPAEEIAGFTVRQPREIPGLLAGHIEAGADEVIFSFPFADTAGITAVGKAFGLGGQ*
Ga0137385_114235991	3300012359	Vadose Zone Soil	MCNVTGDVSTPAGPAEEIAGFTVGQPREIPGLVAGHIEAGADEVIFGFPFADTAGITAVGKAFGLGGQ*
Ga0137360_111299731	3300012361	Vadose Zone Soil	MREMLAAAGSAEEIAGFTVGQPDEIPSLVAGHIEAGADEVIFSFAFADAAGITAVGEALGLRGQ*
Ga0137390_105381703	3300012363	Vadose Zone Soil	TVGEPHEIPGLVAGHIEAGADEVIFSFAFADTAGITAVSEAFGLRGQ*
Ga0126369_125668832	3300012971	Tropical Forest Soil	FTVGQPHEIPDLVAGHIDAGADEVIFSFAFADVAGITALGEAFRLAGR*
Ga0182018_104550182	3300014489	Palsa	TAAGSADEIAGFTVGQPHEIPGLVAGHIEAGADEVIFSFAFADTAGITAVGEAFGLIGQ*
Ga0182015_105356291	3300014495	Palsa	VGQPHQIPDLVAGHIDAGASEIIFSMPFTDTAGIAEVARAFGR*
Ga0182024_108302901	3300014501	Permafrost	EVAAFIIGQPHEVPDLVTGHIAAGADEVIFSFAFADAEGIAAVGKALGLTDSV*
Ga0182024_116803611	3300014501	Permafrost	SAEEVAGFTVGQPHQIPDLVAGHIEAGADEVVFSMPFANGAAIAEVGKAFAR*
Ga0181519_109824811	3300014658	Bog	NTEEVRQLLAASAPADEIAGFLVGQPDEIPDLVAGHLEAGADEIIFSAAFADADGIAALGAALGLR*
Ga0182030_103386353	3300014838	Bog	FIVGQPEEVPDLVAGHVAAGADEVIFSFAFADPAGIGAVGRALGLAGA*
Ga0182033_118081771	3300016319	Soil	FTVGQPHEIPGLVAGHIEAGADEVIFSVPFADTAGITAVAEAFGLGGR
Ga0182038_103016041	3300016445	Soil	AGFTVGQPHEIPGLVAGHIEAGADEVIFSFAFADTAGITAVGKALRLGGR
Ga0187812_10090901	3300017821	Freshwater Sediment	EVAGFTVGQPYEIPGLVAGHIEAGADEVIFSFPFADTAGITAVGEAFGLGGQ
Ga0187806_10231591	3300017928	Freshwater Sediment	AGFTVGQPHEIPGLVAGHIEAGADEVIFSFAFADTAGITAVGKAFGLGGH
Ga0187806_13885321	3300017928	Freshwater Sediment	AETREMLAAAVPAEQIAGFTIGQPHEIPGLVAGHIEAGADEVIFSFPFADTAGITAVGKAFALGG
Ga0187814_100239902	3300017932	Freshwater Sediment	MLTAAASAEEIAGFTVSQPHEIPDLVASHIEAGGDEVIFSFAFADTAGIAAVAGAFGLGR
Ga0187814_103216171	3300017932	Freshwater Sediment	TAEVRQMLAAAASAEEIAGFTVGQPHEIPDLVAGHIAAGADEVIFSFAFADTAGIAAVGKAFGLARQ
Ga0187808_101333063	3300017942	Freshwater Sediment	MLTAAASAEEIAGFTVSQPHEIPDLVASHIEAGGDEVSFSFAFADTAGIA
Ga0187808_106064651	3300017942	Freshwater Sediment	EMVAAAVPAEQIAGFTIGQPHEIPGLVAGHIEAGADEVIFSFAFADTAGITAVGEAFGLGGQ
Ga0187879_101568363	3300017946	Peatland	LAASATAEEVAGFVVGQPQDIPDLVAGHIAAGADEVIFSFAFADRPGIAAVGQALGLPGA
Ga0187817_103705391	3300017955	Freshwater Sediment	EVREMLAAIGSAEEIAGFTVGQPHEIPGLVAGHIEAGADEVIFSFAFADTAGITAVGKAFGLGGH
Ga0187779_103918221	3300017959	Tropical Peatland	GFTVGQPHEIPGLVAGHIEAGADEVIFSFPFADTAGITAVGKALGLGGH
Ga0187779_108819792	3300017959	Tropical Peatland	GFTVGQPHEIPGLVAGHIEAGAAEVIFSFAFADTAGIIAVGEAFGLGGR
Ga0187779_113842992	3300017959	Tropical Peatland	AAAVPAEQIAGFTVGQPHEIPGLVAGHIEAGADEVIFSFPFADTAGITAVGKAFELGG
Ga0187778_107162471	3300017961	Tropical Peatland	QIAGFTVGQPHEIPGLVAGHIEAGADEVIFSFPFADTAGITAVGKALGLD
Ga0187778_111272801	3300017961	Tropical Peatland	ETAGFTVGQPHEIPELVAGHIDAGADEVIFSFAFADTPGIAAVGKALGLGRQ
Ga0187783_102881692	3300017970	Tropical Peatland	ESPDEVAGFTVGQPHEIPDLVAGHVEAGASEIIFSFPFADQGAICSLGQAFGR
Ga0187783_112310172	3300017970	Tropical Peatland	SAEETAGFTIGQPHEIPGLVAGHIDAGADEVIFSFPFADAAGIAAVSRALGLNGRQ
Ga0187781_107913942	3300017972	Tropical Peatland	FTVGQPHEIPGLVAGHIEAGADEVIFSFPFADTAGITAVGKAFGLGGP
Ga0187782_115257382	3300017975	Tropical Peatland	FTVGQPHEIPGLVAGHIEAGADEVIFSFAFADTAGITAVAEAFGLGGR
Ga0187805_102022821	3300018007	Freshwater Sediment	AASAEEIAGFTVGQPHEIPDLVASHIEAGGDEVIFSFAFADTAGIAAVAGAFGLGRL
Ga0187875_102446932	3300018035	Peatland	GQPHEIPEMVAHHIAAGADEVIFSFAFADTVGISAVGEAFGLGGVSRP
Ga0187766_102643411	3300018058	Tropical Peatland	TAEVHEMLAAAGSAEEIAGFTIGQPHEIPGLVAGHIEAGADEVIFSFAFADTAGITAVGEALGLGGR
Ga0187765_101938102	3300018060	Tropical Peatland	REMLAAAVPAEEIAGFTVGQPHEIPGLVAGHIEAGADEVIFSFAFADTAGITAVAEALGLGRD
Ga0187773_105041461	3300018064	Tropical Peatland	AGFTVGQPHEIPGLVAGHIEAGADEVIFSFAFADTAGITAVGEAFGLGRQ
Ga0187772_100923653	3300018085	Tropical Peatland	MLAAAVTAEQTAGFTVGQPHEIPGLVAGHIEAGADEVIFSFPFADTAGITAVGKAFGLGR
Ga0187769_109901241	3300018086	Tropical Peatland	GFTVGQPHEIPGLIAGYIEAGAGEVIFSFPFADTAGITAVGKALGLGGH
Ga0187770_101448671	3300018090	Tropical Peatland	VPAEQTAGFTVGQPHEIPGLVAGHIEAGADEVIFSFPFADTAGITAVAEAFGLGR
Ga0182031_10892362	3300019787	Bog	GSAQEIAGFTVGQPREIPDLVAAHIDAGADEVIFSLAFADKAGIAAVGAACGLSGMPTP
Ga0210399_107898981	3300020581	Soil	PAEQIAGFTIGQPHEIPGLVAGHIEAGADEVIFSFAFADTAGITAVGEAFGLGGQ
Ga0210408_106797081	3300021178	Soil	AEVRQMLSAAASAEETAGFTVGQPQEIPDLVADHIEAGADEVIFSFAFADAAGIGAVAQAFGLGRQ
Ga0210396_108277592	3300021180	Soil	AEVREMVAAAVPAEQIAGFTIGQPHEIPGLVAGHIEAGADEVIFSVPFADTAGLTAVGEAFGLGGH
Ga0210389_108617191	3300021404	Soil	VGQPHEIPGLVAGHIEAGAEEVIFSFAFADTDGIAAVAQAFGLSAG
Ga0242659_10065931	3300022522	Soil	TAEVHEMLAAAASAEEIAGFTVGQPHEIAALVAGHIEAGADEVIFSFAFADTAGITALGEALGLSGR
Ga0242662_102715261	3300022533	Soil	AGFTVGQPHEIPGLIAGHIEAGADEVIFSHAFADTAGITALGDVLGLGGQ
Ga0228598_10711222	3300024227	Rhizosphere	EVREMVAAAVPAEQIAGFTIGQPHEIPGLVAGHIEAGADEVIFSFAFADTAGIAAVGAAFGLGGQ
Ga0208194_10787781	3300025412	Peatland	GQPHEIPDLVAGHIEAGADEVIFSFAFADVAGITAVGEAFDLGGRLRT
Ga0208589_10313793	3300025634	Arctic Peat Soil	AASVPAGEISGFTVGQPHEIPGLIAGHIEAGADEVIFSVPFADAAAITAVAEAFRLNAH
Ga0207664_109212561	3300025929	Agricultural Soil	AEQIAGFTIGQPHEIPGLVAGHIEAGADEVIFSFAFADTAGITAVGEALGLGGQ
Ga0257160_10179251	3300026489	Soil	AAAASAEETAGFTVGQPHEIPGMVAGHIEAGADEVIFSFAFADAAGMAAVGEAFGLGRQ
Ga0208731_10391291	3300027029	Forest Soil	EVREMLAAAGSAEETAGFTVGQPHEIPGLVAGHVEAGADEVIFSVPFADTAGITAVGEAFGLGGH
Ga0208324_10225353	3300027604	Peatlands Soil	GFTIGQPHEIPGLVAGHIEAGADEVIFSFPFADTAGITAVGEAFGLGGQ
Ga0208565_10296522	3300027662	Peatlands Soil	AGFTVGQPHEIPGLVAGHIEAGADEVIFSFPFADTAGITAVGEAFGLGGQ
Ga0209626_11820122	3300027684	Forest Soil	TVGQPHEIPGLIAGHIEAGADEVIFSHAFADTAGITALGDALGLGGQ
Ga0207862_12561232	3300027703	Tropical Forest Soil	GQPHEVPELLADHIGAGVDEVIFSFAFPDPAAVASVAQALGLGARSPA
Ga0209178_12719302	3300027725	Agricultural Soil	EVHEMLAAAASPEEIAGFTVGQPHEIPGLVAGHIEAGADEVIFSFAFADGAGISALGKAFGLAGH
Ga0209517_100598621	3300027854	Peatlands Soil	AGFTVGQPQEIPGLVAGHIEAGADEVIFSFPFADTAGITAVGEAFGLGGQ
Ga0209590_100872391	3300027882	Vadose Zone Soil	MCNMTGDVSTLVGPAEEIAGFTVGQPREIPGLLAGHIEAGADEVIFSFPFADTAGITAVGKAFGLGGQ
Ga0209380_105732771	3300027889	Soil	GSAEQVAGFTVGQPHEIPGLVAGHIEAGADEVIFSFAFADTAGITAVGEAFGLGAALER
Ga0209698_113653971	3300027911	Watersheds	SEETAGFTIGQAHEIPDLVAGHIAAGADEVIFSFAFADAAGIAAVAQAFGLGNAVRPGHR
Ga0209168_101973071	3300027986	Surface Soil	VAAAVPAEQIAGFTIGQPHEIPGLVAGHIEAGADEVIFSFAFADTAGITAVGEAFGLGGQ
Ga0302202_101769572	3300028762	Bog	GAPPEERAAFIVGQPDEVPDLVAGAIAAGADEVIFSFAFADRDGIAAVGRALGLGGA
Ga0302279_102495861	3300028783	Bog	GFTVGQPHEVPALIADHIAAGADEVIFSFAFADAAGIRAVGEAFGLTR
Ga0311340_109824482	3300029943	Palsa	LAAAASAEEIAGFTVGQAHEIPDLVAGHIEAGADEVIFSFPFADAASIAAVGQVFELSSS
Ga0311338_105457411	3300030007	Palsa	MHELLAASAPASETAGFTVGQPHQIPELIAPHIEAGADEVIFSAPFADPAAIAALAQALKLPR
Ga0311338_120362032	3300030007	Palsa	GILAAAASAEEIVGFTVGQAHEIPDLVAGHIEAGADEVIFSFPFADAASIAAVGQVFELSSS
Ga0310037_101495213	3300030494	Peatlands Soil	AAGSAEEIAGFTVGQPHEIPALVAGHIEAGADEVIFSFAFADSAGIAAVGEALGLDRQ
Ga0310037_102642032	3300030494	Peatlands Soil	FTVGQPHEIPGLVAGHIEAGADEVIFSFPFADIAGITAVGEAFGLGGQ
Ga0311357_106995891	3300030524	Palsa	AGAPPDARAGFIVGQPDEIPELVAGHIEAGADQVIFSFVSADEAGIAEVGRALGLTDA
Ga0316363_102129311	3300030659	Peatlands Soil	AVGSAEEIAGFTVGQPQEIPGLVAGHIEAGADEVIFSFPFADTAGITAVGEAFGLGGQ
Ga0310038_100975571	3300030707	Peatlands Soil	FTVGQPHEIPGLVAGHIEAGADEVIFSFPFADTAGITAVGEAFGLGGQ
Ga0310038_101081201	3300030707	Peatlands Soil	EEIAGFTVGQPHEIPGLVAGHIEAGADEVIFSLPFADAAGITGVAEAFGLRGQ
Ga0265750_10058681	3300030813	Soil	EEIAGFTVGQPHEIADLVAGHIEAGADEVIFSFAFADTAEITALGEALGLSGR
Ga0265760_101118292	3300031090	Soil	AASPEEIAGFTVGQPHEIADLVAGHIEAGADEVIFSFAFADTAEITALGEALGLSGR
Ga0265760_103661191	3300031090	Soil	VAAIAVLIAGTRCGAIEMLAAGSAGETAGFTVGQPHEIPGLVAGHIEAGADEVIFSFPFADTAGITAVGQAFGLGGQ
Ga0170823_124036392	3300031128	Forest Soil	AAASPEEIAGFTVGQPHEIPDLVASHIEAGADEVIFSFAFADSAGIAALGKAFGLGGL
Ga0302318_101117673	3300031258	Bog	EIAGFTVGQPREIPDLVAAHIDAGADEVIFSLAFADKAGIAAVGAACGLSGMPTP
Ga0318515_107099492	3300031572	Soil	SVGQPHEIPGLVAGHIEAGADEVIFSFPFADTAGITAVAEAFGLGGRSSAAGAG
Ga0307373_100691081	3300031672	Soil	EVAGFIVGQPDEVPGLLAGHLDAGADEVIFSFAFGDRAGIAALGQALALGGT
Ga0310686_1045642111	3300031708	Soil	EMVAAAVPAEQIAGFTIGQPHQIPGLVAGHIDAGADEVIFSFAFADTAGITAVGKAFGLSGH
Ga0310686_1136519772	3300031708	Soil	AEEIAGFTVGQPHEIPGLVAGHIEAGADEVIFSFAFADTAGIAAVGKAFGLGGH
Ga0307477_103893111	3300031753	Hardwood Forest Soil	AAAVPAEQVAGFTIGQPHEIPGLIAGHIEAGADEVIFSFAFADTAGITAVGEAFGLGGQ
Ga0318554_108523751	3300031765	Soil	AVVSPEQIAGFTVGQPHEIPGLVAGHIEAGADEVIFSFAFADTAGITAVGKAFGLGGR
Ga0318526_102871851	3300031769	Soil	FTVGQPHEIPGLVAGHIEAGADEVIFSFAFADTAGITAVGQAFGLGGR
Ga0318552_106768122	3300031782	Soil	VGSAEQTAGFTVGQPHEIPGLVAGHIEAGADEVIFSFPFADTAGITAVGEAFGLGR
Ga0318523_106733511	3300031798	Soil	VEVHEMLAAVGSAEQTAGFTVGQPHEIPGLVAGHIEAGADEVIFSFPFADTAGITAVGEAFGLGR
Ga0318567_108325121	3300031821	Soil	EQIAGFTVGQPHEIPGLVAGHIEAGADEVIFSFAFADTAGITAVGKALGLGGR
Ga0306923_103092871	3300031910	Soil	GFTVGQPHEIPGLVAGHIEAGADEVIFSFPFADTAGITAVGKAFGLGG
Ga0318575_100544952	3300032055	Soil	EQIAGFTVGQPHEIPGLVAGHIEAGADEVIFSFAFADTAGITAVGKALRLGGR
Ga0318510_102385112	3300032064	Soil	PAVGSAEQTAGFTVGQPHEIPGLVAGHIEAGADEVIFSFPFADTAGITAVGEAFGLGR
Ga0318510_105138241	3300032064	Soil	EMLAAAGSAEQIAGFTVGQPHEIPGLVAGHIEAGADEVIFSFAFADTAGITAVGKALRLGGR
Ga0311301_104010141	3300032160	Peatlands Soil	GGSAGEIAGFTVGQPHEIPGLVAGHIEAGADEVIFSFPFADTAGITAVGEAFGLGGQ
Ga0306920_1037444981	3300032261	Soil	AGFTVGQPHEIPDLLAGHLAAGVDEVIFSFAFADPVAIASVGQALGLGARSPV
Ga0335072_103521181	3300032898	Soil	GFTVGQPGEIPDLVAAHIEAGADEVIFSLPFADAAGVAAVAQALGLSGQ
Ga0335083_1002316911	3300032954	Soil	TAEVHEMLSAAASPAEIAGFTVGQPHEIPDLVAGHIDAGADEVIFSFAFADGAGITALGEAFRLAGR
Ga0334854_117155_499_639	3300033829	Soil	VGQAHEIPDLVAGHIEAGADEVIFSFPFADAASIAAVGEVLGLPSS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F060146

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences