Metagenome / Metatranscriptome Family F060081

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F060081
Family Type	Metagenome / Metatranscriptome
Number of Sequences	133
Average Sequence Length	104 residues
Representative Sequence	IPETSRLLATIPQADAIRDKLAEPLLFQHWDELTQRAIWIASDGSHVRCVTVTGLSVLEMADMWVSFNERLSRARFNLSPQLVREIIEAEIDVSVVLVN
Number of Associated Samples	88
Number of Associated Scaffolds	133

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	36.09 %
% of genes near scaffold ends (potentially truncated)	42.11 %
% of genes from short scaffolds (< 2000 bps)	75.94 %
Associated GOLD sequencing projects	72
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.63

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (66.165 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere (18.797 % of family members)
Environment Ontology (ENVO)	Unclassified (57.143 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (67.669 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 33.86% β-sheet: 20.47% Coil/Unstructured: 45.67%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.63
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.63
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 133 Family Scaffolds
PF00072	Response_reg	24.06
PF00076	RRM_1	19.55
PF00144	Beta-lactamase	4.51
PF13437	HlyD_3	2.26
PF05368	NmrA	1.50
PF00043	GST_C	1.50
PF13893	RRM_5	1.50
PF13460	NAD_binding_10	1.50
PF00691	OmpA	1.50
PF00196	GerE	0.75
PF13410	GST_C_2	0.75
PF00775	Dioxygenase_C	0.75
PF00903	Glyoxalase	0.75
PF07362	CcdA	0.75
PF07992	Pyr_redox_2	0.75
PF07715	Plug	0.75
PF14384	BrnA_antitoxin	0.75
PF04970	LRAT	0.75
PF01202	SKI	0.75
PF01479	S4	0.75
PF00348	polyprenyl_synt	0.75
PF13533	Biotin_lipoyl_2	0.75
PF12840	HTH_20	0.75
PF12697	Abhydrolase_6	0.75
PF02739	5_3_exonuc_N	0.75

COG ID	Name	Functional Category	% Frequency in 133 Family Scaffolds
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	4.51
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	4.51
COG2367	Beta-lactamase class A	Defense mechanisms [V]	4.51
COG0435	Glutathionyl-hydroquinone reductase	Energy production and conversion [C]	1.50
COG0625	Glutathione S-transferase	Posttranslational modification, protein turnover, chaperones [O]	1.50
COG0142	Geranylgeranyl pyrophosphate synthase	Coenzyme transport and metabolism [H]	0.75
COG0258	5'-3' exonuclease Xni/ExoIX (flap endonuclease)	Replication, recombination and repair [L]	0.75
COG3485	Protocatechuate 3,4-dioxygenase beta subunit	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.75
COG5302	Post-segregation antitoxin (ccd killing mechanism protein) encoded by the F plasmid	Mobilome: prophages, transposons [X]	0.75

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	66.17 %
Unclassified	root	N/A	33.83 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	66.17 %
Unclassified	root	N/A	33.83 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	66.17 %
Unclassified	root	N/A	33.83 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	37.59 %
Unclassified	root	N/A	33.83 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2.26 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.83 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	12.03 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.50 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1.50 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.75 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.83 %
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	9.02 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	1.50 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.50 %
Cellvibrionales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales	0.75 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.75 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.83 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	9.02 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.50 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.50 %
Cellvibrionaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Cellvibrionaceae	0.75 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	0.75 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.83 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	9.02 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.50 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.50 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.75 %
Cellvibrio	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Cellvibrionaceae → Cellvibrio	0.75 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.83 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	9.02 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.50 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.50 %
Micromonospora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora	0.75 %
unclassified Cellvibrio	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Cellvibrionaceae → Cellvibrio → unclassified Cellvibrio	0.75 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.83 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	9.02 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.50 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.50 %
Cellvibrio sp. BR	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Cellvibrionaceae → Cellvibrio → unclassified Cellvibrio → Cellvibrio sp. BR	0.75 %
Micromonospora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora	0.75 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.75 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_101468771	Not Available	1563	Open in IMG/M
3300002568\|C688J35102_120054891	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	861	Open in IMG/M
3300003316\|rootH1_10023488	All Organisms → cellular organisms → Bacteria → Proteobacteria	2622	Open in IMG/M
3300003323\|rootH1_10097870	All Organisms → cellular organisms → Bacteria	1330	Open in IMG/M
3300004800\|Ga0058861_12035056	All Organisms → cellular organisms → Bacteria → Proteobacteria	1162	Open in IMG/M
3300004803\|Ga0058862_12334360	All Organisms → cellular organisms → Bacteria	1156	Open in IMG/M
3300005260\|Ga0074072_1000017	All Organisms → cellular organisms → Bacteria → Proteobacteria	97885	Open in IMG/M
3300005260\|Ga0074072_1001363	All Organisms → cellular organisms → Bacteria	14825	Open in IMG/M
3300005260\|Ga0074072_1045478	Not Available	1327	Open in IMG/M
3300005329\|Ga0070683_100900803	Not Available	848	Open in IMG/M
3300005331\|Ga0070670_100421464	All Organisms → cellular organisms → Bacteria	1180	Open in IMG/M
3300005331\|Ga0070670_101390111	All Organisms → cellular organisms → Bacteria → Proteobacteria	643	Open in IMG/M
3300005335\|Ga0070666_10084308	All Organisms → cellular organisms → Bacteria	2175	Open in IMG/M
3300005337\|Ga0070682_100134000	All Organisms → cellular organisms → Bacteria	1680	Open in IMG/M
3300005347\|Ga0070668_101290633	Not Available	663	Open in IMG/M
3300005365\|Ga0070688_100677730	Not Available	796	Open in IMG/M
3300005367\|Ga0070667_101323765	All Organisms → cellular organisms → Bacteria → Proteobacteria	675	Open in IMG/M
3300005367\|Ga0070667_101969191	Not Available	550	Open in IMG/M
3300005436\|Ga0070713_100119547	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2309	Open in IMG/M
3300005436\|Ga0070713_101568709	Not Available	639	Open in IMG/M
3300005437\|Ga0070710_10710924	Not Available	710	Open in IMG/M
3300005439\|Ga0070711_101946439	Not Available	517	Open in IMG/M
3300005537\|Ga0070730_10941741	Not Available	540	Open in IMG/M
3300005548\|Ga0070665_100055469	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3974	Open in IMG/M
3300005548\|Ga0070665_101583229	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	663	Open in IMG/M
3300005573\|Ga0078972_1025152	All Organisms → cellular organisms → Bacteria → Proteobacteria	6858	Open in IMG/M
3300005577\|Ga0068857_100426415	All Organisms → cellular organisms → Bacteria → Proteobacteria	1237	Open in IMG/M
3300005614\|Ga0068856_101339346	Not Available	731	Open in IMG/M
3300005617\|Ga0068859_100807884	All Organisms → cellular organisms → Bacteria	1025	Open in IMG/M
3300005719\|Ga0068861_100519003	All Organisms → cellular organisms → Bacteria → Proteobacteria	1080	Open in IMG/M
3300005719\|Ga0068861_102474833	Not Available	522	Open in IMG/M
3300005842\|Ga0068858_100027613	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Cellvibrionaceae → Cellvibrio → unclassified Cellvibrio → Cellvibrio sp. BR	5272	Open in IMG/M
3300005843\|Ga0068860_100511282	All Organisms → cellular organisms → Bacteria	1200	Open in IMG/M
3300005844\|Ga0068862_100293375	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1494	Open in IMG/M
3300006237\|Ga0097621_100132651	All Organisms → cellular organisms → Bacteria → Proteobacteria	2121	Open in IMG/M
3300006237\|Ga0097621_100367295	All Organisms → cellular organisms → Bacteria	1283	Open in IMG/M
3300006904\|Ga0075424_100897937	Not Available	945	Open in IMG/M
3300006954\|Ga0079219_10734532	Not Available	759	Open in IMG/M
3300009093\|Ga0105240_10192937	All Organisms → cellular organisms → Bacteria → Proteobacteria	2394	Open in IMG/M
3300009093\|Ga0105240_11195861	Not Available	805	Open in IMG/M
3300009093\|Ga0105240_11364475	Not Available	746	Open in IMG/M
3300009093\|Ga0105240_11825881	Not Available	633	Open in IMG/M
3300009101\|Ga0105247_10029792	All Organisms → cellular organisms → Bacteria → Proteobacteria	3309	Open in IMG/M
3300009174\|Ga0105241_10246367	All Organisms → cellular organisms → Bacteria	1513	Open in IMG/M
3300009177\|Ga0105248_12590784	Not Available	578	Open in IMG/M
3300009545\|Ga0105237_10023356	All Organisms → cellular organisms → Bacteria → Proteobacteria	6338	Open in IMG/M
3300009545\|Ga0105237_10172210	All Organisms → cellular organisms → Bacteria	2165	Open in IMG/M
3300009545\|Ga0105237_10496672	Not Available	1227	Open in IMG/M
3300009545\|Ga0105237_11538038	Not Available	672	Open in IMG/M
3300009545\|Ga0105237_11550279	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	669	Open in IMG/M
3300009551\|Ga0105238_10119833	All Organisms → cellular organisms → Bacteria → Proteobacteria	2611	Open in IMG/M
3300009551\|Ga0105238_11083408	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	823	Open in IMG/M
3300009551\|Ga0105238_11312740	Not Available	750	Open in IMG/M
3300009553\|Ga0105249_10164925	All Organisms → cellular organisms → Bacteria → Proteobacteria	2144	Open in IMG/M
3300009553\|Ga0105249_11734878	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	697	Open in IMG/M
3300009553\|Ga0105249_12890056	Not Available	551	Open in IMG/M
3300010371\|Ga0134125_10235129	All Organisms → cellular organisms → Bacteria → Proteobacteria	2037	Open in IMG/M
3300010371\|Ga0134125_11629511	Not Available	702	Open in IMG/M
3300010371\|Ga0134125_12365575	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	578	Open in IMG/M
3300010375\|Ga0105239_10370930	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1617	Open in IMG/M
3300010375\|Ga0105239_10466991	All Organisms → cellular organisms → Bacteria → Proteobacteria	1433	Open in IMG/M
3300010375\|Ga0105239_11929377	All Organisms → cellular organisms → Bacteria	685	Open in IMG/M
3300010396\|Ga0134126_10786486	All Organisms → cellular organisms → Bacteria	1076	Open in IMG/M
3300010401\|Ga0134121_10648707	All Organisms → cellular organisms → Bacteria	994	Open in IMG/M
3300010401\|Ga0134121_12075218	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	602	Open in IMG/M
3300011119\|Ga0105246_11889640	Not Available	573	Open in IMG/M
3300011120\|Ga0150983_10012913	All Organisms → cellular organisms → Bacteria	1515	Open in IMG/M
3300012212\|Ga0150985_113912245	All Organisms → cellular organisms → Bacteria	1524	Open in IMG/M
3300012469\|Ga0150984_104035047	Not Available	718	Open in IMG/M
3300012469\|Ga0150984_116649028	All Organisms → cellular organisms → Bacteria	1265	Open in IMG/M
3300012982\|Ga0168317_1038731	All Organisms → cellular organisms → Bacteria	1255	Open in IMG/M
3300013105\|Ga0157369_11346357	Not Available	727	Open in IMG/M
3300013306\|Ga0163162_10048601	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4251	Open in IMG/M
3300013307\|Ga0157372_10711834	All Organisms → cellular organisms → Bacteria	1168	Open in IMG/M
3300013308\|Ga0157375_13394497	All Organisms → cellular organisms → Bacteria	530	Open in IMG/M
3300014168\|Ga0181534_10006853	All Organisms → cellular organisms → Bacteria	6302	Open in IMG/M
3300014968\|Ga0157379_11446946	All Organisms → cellular organisms → Bacteria	667	Open in IMG/M
3300017937\|Ga0187809_10035130	Not Available	1605	Open in IMG/M
3300021168\|Ga0210406_10584286	Not Available	874	Open in IMG/M
3300022894\|Ga0247778_1000774	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	25855	Open in IMG/M
3300022894\|Ga0247778_1008905	All Organisms → cellular organisms → Bacteria	2284	Open in IMG/M
3300022894\|Ga0247778_1180498	All Organisms → cellular organisms → Bacteria → Proteobacteria	587	Open in IMG/M
3300022897\|Ga0247764_1045111	All Organisms → cellular organisms → Bacteria	1388	Open in IMG/M
3300022897\|Ga0247764_1104002	Not Available	867	Open in IMG/M
3300022917\|Ga0247777_1000076	All Organisms → cellular organisms → Bacteria → Proteobacteria	29599	Open in IMG/M
3300022917\|Ga0247777_1038825	All Organisms → cellular organisms → Bacteria	1722	Open in IMG/M
3300022917\|Ga0247777_1050620	All Organisms → cellular organisms → Bacteria	1472	Open in IMG/M
3300023062\|Ga0247791_1045077	Not Available	690	Open in IMG/M
3300023268\|Ga0247765_1004078	All Organisms → cellular organisms → Bacteria → Proteobacteria	4474	Open in IMG/M
3300023270\|Ga0247784_1011832	All Organisms → cellular organisms → Bacteria → Proteobacteria	2017	Open in IMG/M
3300023270\|Ga0247784_1066566	All Organisms → cellular organisms → Bacteria → Proteobacteria	894	Open in IMG/M
3300025900\|Ga0207710_10000324	All Organisms → cellular organisms → Bacteria → Proteobacteria	36526	Open in IMG/M
3300025900\|Ga0207710_10018273	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2980	Open in IMG/M
3300025903\|Ga0207680_10611824	All Organisms → cellular organisms → Bacteria → Proteobacteria	779	Open in IMG/M
3300025911\|Ga0207654_10128764	All Organisms → cellular organisms → Bacteria	1599	Open in IMG/M
3300025911\|Ga0207654_10646779	Not Available	757	Open in IMG/M
3300025911\|Ga0207654_11245762	Not Available	542	Open in IMG/M
3300025912\|Ga0207707_10350395	Not Available	1272	Open in IMG/M
3300025913\|Ga0207695_10979306	Not Available	725	Open in IMG/M
3300025913\|Ga0207695_11257920	Not Available	620	Open in IMG/M
3300025914\|Ga0207671_10013250	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	6577	Open in IMG/M
3300025914\|Ga0207671_10030227	All Organisms → cellular organisms → Bacteria	4041	Open in IMG/M
3300025914\|Ga0207671_11324364	Not Available	560	Open in IMG/M
3300025921\|Ga0207652_10180252	All Organisms → cellular organisms → Bacteria → Proteobacteria	1898	Open in IMG/M
3300025924\|Ga0207694_10256402	Not Available	1432	Open in IMG/M
3300025925\|Ga0207650_10264253	All Organisms → cellular organisms → Bacteria	1397	Open in IMG/M
3300025928\|Ga0207700_10105738	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2255	Open in IMG/M
3300025942\|Ga0207689_10983815	All Organisms → cellular organisms → Bacteria	712	Open in IMG/M
3300025972\|Ga0207668_10347545	Not Available	1239	Open in IMG/M
3300025972\|Ga0207668_11677853	Not Available	574	Open in IMG/M
3300025986\|Ga0207658_10848342	Not Available	831	Open in IMG/M
3300025986\|Ga0207658_11336184	All Organisms → cellular organisms → Bacteria → Proteobacteria	655	Open in IMG/M
3300026035\|Ga0207703_10672484	Not Available	983	Open in IMG/M
3300026035\|Ga0207703_10821760	All Organisms → cellular organisms → Bacteria → Proteobacteria	888	Open in IMG/M
3300026035\|Ga0207703_11393079	Not Available	674	Open in IMG/M
3300026078\|Ga0207702_10489729	All Organisms → cellular organisms → Bacteria	1198	Open in IMG/M
3300026078\|Ga0207702_10520019	All Organisms → cellular organisms → Bacteria	1162	Open in IMG/M
3300027809\|Ga0209574_10137504	Not Available	733	Open in IMG/M
3300027809\|Ga0209574_10259409	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora	579	Open in IMG/M
3300027863\|Ga0207433_10179620	All Organisms → cellular organisms → Bacteria	1672	Open in IMG/M
3300027869\|Ga0209579_10546542	Not Available	629	Open in IMG/M
3300028379\|Ga0268266_10477969	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1187	Open in IMG/M
3300028380\|Ga0268265_10198253	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1739	Open in IMG/M
3300028381\|Ga0268264_10460834	All Organisms → cellular organisms → Bacteria	1233	Open in IMG/M
3300028381\|Ga0268264_11780073	All Organisms → cellular organisms → Bacteria → Proteobacteria	626	Open in IMG/M
3300028381\|Ga0268264_12069956	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	578	Open in IMG/M
3300028573\|Ga0265334_10022199	All Organisms → cellular organisms → Bacteria	2589	Open in IMG/M
3300031670\|Ga0307374_10351283	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	888	Open in IMG/M
3300031726\|Ga0302321_100463623	All Organisms → cellular organisms → Bacteria → Proteobacteria	1392	Open in IMG/M
3300031749\|Ga0315298_1030872	All Organisms → cellular organisms → Bacteria → Proteobacteria	4791	Open in IMG/M
3300031996\|Ga0308176_11802584	Not Available	653	Open in IMG/M
3300032829\|Ga0335070_10002284	All Organisms → cellular organisms → Bacteria → Proteobacteria	22348	Open in IMG/M
3300032954\|Ga0335083_10161833	All Organisms → cellular organisms → Bacteria → Proteobacteria	2097	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	63.16%
Environmental	Environmental	36.84%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	61.65%
Terrestrial	Environmental → Terrestrial	33.08%
Aquatic	Environmental → Aquatic	3.76%
Human	Host-Associated → Human	1.50%

Habitat	Taxonomy	Distribution
Rhizosphere	Host-Associated → Plants → Rhizosphere	42.11%
Soil	Environmental → Terrestrial → Soil	23.31%
Rhizoplane	Host-Associated → Plants → Rhizoplane	15.04%
Plant Litter	Environmental → Terrestrial → Plant Litter	8.27%
Thermal Springs	Environmental → Aquatic → Thermal Springs	2.26%
Freshwater	Environmental → Aquatic → Freshwater	1.50%
Digestive System	Host-Associated → Human → Digestive System	1.50%
Roots	Host-Associated → Plants → Roots	1.50%
Rhizome	Host-Associated → Plants → Rhizome	1.50%
Phylloplane	Host-Associated → Plants → Phylloplane	1.50%
Peat	Environmental → Terrestrial → Peat	0.75%
Geologic	Environmental → Terrestrial → Geologic	0.75%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	28.57%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	14.29%
Soil	Host-Associated → Plants → Rhizosphere → Soil	13.53%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	12.03%
Loam	Environmental → Terrestrial → Soil → Loam	9.02%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	8.27%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	2.26%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.50%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.50%
Large Intestine	Host-Associated → Human → Digestive System → Large Intestine	1.50%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	1.50%
Unclassified	Host-Associated → Plants → Rhizome → Unclassified	1.50%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified	1.50%
Clay	Environmental → Terrestrial → Soil → Clay	0.75%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.75%
Mine	Environmental → Terrestrial → Geologic → Mine	0.75%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.75%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	28.57%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	14.29%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	13.53%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	8.27%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	7.52%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	6.02%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	3.01%
Unclassified	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified	2.26%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.50%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.50%
Fecal	Host-Associated → Human → Digestive System → Large Intestine → Fecal	1.50%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	1.50%
Unclassified	Host-Associated → Plants → Rhizome → Unclassified → Unclassified	1.50%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified	1.50%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.75%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.75%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.75%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.75%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.75%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.75%
Unclassified	Environmental → Terrestrial → Soil → Clay → Unclassified	0.75%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.75%
Unclassified	Environmental → Terrestrial → Geologic → Mine → Unclassified	0.75%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.75%

Habitat	Taxonomy	Distribution
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	18.80%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	11.28%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	9.77%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	8.27%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	5.26%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	4.51%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	3.01%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	3.01%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	3.01%
Hot Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified → Hot Spring	1.50%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.50%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.50%
Host-Associated	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated	1.50%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	1.50%
Sugarcane Root And Bulk Soil	Host-Associated → Plants → Rhizome → Unclassified → Unclassified → Sugarcane Root And Bulk Soil	1.50%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.50%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	1.50%
Agave	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified → Agave	1.50%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.75%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.75%
Hot Spring Microbial Mat	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified → Hot Spring Microbial Mat	0.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.75%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.75%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.75%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.75%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.75%
Soil	Environmental → Terrestrial → Soil → Clay → Unclassified → Soil	0.75%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	0.75%
Weathered Mine Tailings	Environmental → Terrestrial → Geologic → Mine → Unclassified → Weathered Mine Tailings	0.75%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.75%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.75%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.75%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.75%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.75%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.75%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.75%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.75%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300003316	Sugarcane root Sample L1	Host-Associated	Open in IMG/M
3300003323	Sugarcane root Sample H1	Host-Associated	Open in IMG/M
3300004800	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-1 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300004803	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-2 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300005260	Microbial communities on the surface of kaolinite enhanced biochar from soil with fertiliser in Sydney, Australia	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005573	Hot spring thermophilic microbial communities from Obsidian Pool, Yellowstone National Park, USA - OP-RAMG-01 (SPADES assembly)	Environmental	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012982	Weathered mine tailings microbial communities from Hibbing, Minnesota, USA - DCWfield	Environmental	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014168	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_10_metaG	Environmental	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300017937	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_4	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300022894	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L049-202B-5	Environmental	Open in IMG/M
3300022897	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L051-202B-4	Environmental	Open in IMG/M
3300022917	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L154-409C-5	Environmental	Open in IMG/M
3300023062	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S081-202R-4	Environmental	Open in IMG/M
3300023268	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L106-311C-6	Environmental	Open in IMG/M
3300023270	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L169-409R-5	Environmental	Open in IMG/M
3300025900	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025913	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025924	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027809	Agave microbial communities from Guanajuato, Mexico - Mg.Ma.rz (SPAdes)	Host-Associated	Open in IMG/M
3300027863	Hot spring thermophilic microbial communities from Obsidian Pool, Yellowstone National Park, USA - OP-RAMG-01 (SPAdes)	Environmental	Open in IMG/M
3300027869	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028573	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG	Host-Associated	Open in IMG/M
3300031670	Soil microbial communities from Risofladan, Vaasa, Finland - OX-3	Environmental	Open in IMG/M
3300031726	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_1	Environmental	Open in IMG/M
3300031749	Extremophilic microbial mat communities from Washburn Hot Springs, YNP, Wyoming, USA - WHS_1_MG	Environmental	Open in IMG/M
3300031996	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2	Environmental	Open in IMG/M
3300032829	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3	Environmental	Open in IMG/M
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1014687713	3300000364	Soil	VLETARLLAEVPQLSQIREKLAEPLLFQHWDELTERAIWIASDGIQVRCVTVTGLSVHEMADMWVSVNERLSRAKFNLSPQLVREIIEAEIDVSVALVN*
C688J35102_1200548913	3300002568	Soil	VRIGWSLTSVAGPRPVADLQNRLQTRITSLSAALSDVPETSRLLATVPQADAIRDKLAEPLLFQHWDELTQRAIWIASDGNHVRCVTVTGLSVLELADMWVS
rootH1_100234886	3300003316	Sugarcane Root And Bulk Soil	LSAAISNATETARLLARVPQAADTLSEKLAEPLLFQHWDEPTQCAIWIASDGTHVRCVTVSGLSVLEMADMWVSFGERISRAGFNLSPQLFRDIIEAEIEVPVALVS*
rootH1_100978702	3300003323	Sugarcane Root And Bulk Soil	VPQAARSLSEKLGEPLLFQHWDDSTQRAVWIASDGIHVRCVTVTGLSVHEMADMWVSFGERVSRAKFNLSAQLVREIIEAEIDVAVTLVN*
Ga0058861_120350563	3300004800	Host-Associated	EPLLFQHWDHSRQCAIWIASDGTRVRCVTVTGLSGVEMADMWVSFGERISRAGFNLSAQLVRDIIEAEIDVSVALVH*
Ga0058862_123343602	3300004803	Host-Associated	VPQAADSLSEKLAEPLLFQHWDHSRQCAIWIASDGTRVRCVTVTGLSGVEMADMWVSFGERISRAGFNLSAQLVRDIIEAEIDVSVALVH*
Ga0074072_100001741	3300005260	Soil	LQSRLQTRITSLSAALSDAPETNRLLAEVPQAAAIREKLAEPLLFQHWDELTQRAIWIASDGTHVRCVTVTGLSVLEMADMWLSFNQRLSRAKFNLSPQLVREIIEAEIDVSVVLVS*
Ga0074072_10013638	3300005260	Soil	VPQLDQIRDKLSEPLLFQHWDEVTQRAIWIASDGSQVRCVTVTGLSVHEMADMWVSFNERLSRARFSLSPQLVREIIEAEIDVSVALVH*
Ga0074072_10454781	3300005260	Soil	AACREARIGRSLSSSTAGASRVVDLQSRSQTSIISLSAALSDAPETNRLLAEVPQAAAIREKLAEPLLFQHWDELTQRAIWIASDGTHVRCVTVTGLSVLEMADMWLSFNQRLSRAKFNLSPQLVREIIEAEIDVSVVLVS*
Ga0070683_1009008032	3300005329	Corn Rhizosphere	LLFQHWDHSRQCAIWIASDGTRVRCVTVTGLSGVEMADMWVSFGERISRAGFNLSAQLVRDIIEAEIDVSVALVH*
Ga0070670_1004214642	3300005331	Switchgrass Rhizosphere	LQNRLQTRITSLSAALCDIPETSRLLATIPQADAIRDKLAEPLLFQHWDELTQRAIWIASDGSHVRCVTVTGLSVLEMADMWVSFNERLSRARFNLSPQLVREIIEAEIDVSVVLVN*
Ga0070670_1013901112	3300005331	Switchgrass Rhizosphere	VSSLSAALCNGPETARLLARVPGAEGTLGEKLGEPLLFQHWDDSTQRAIWIASDGIHVRCVTVTGLSVFEMADMWVSFGERISRAKFNLSPQLVREIIEAEIEVSVLLVN*
Ga0070666_100843083	3300005335	Switchgrass Rhizosphere	VDSPTRAQTRIASLSAAISNVLETTRLLAEVPQAHEIREKLTEPLLFQHWDELTQRAIWIASDGSHVRCVTVTGLSAYEMADMWLSFNERIIRAAFNLSPQLVREIIEAEIDVPVALVN*
Ga0070682_1001340004	3300005337	Corn Rhizosphere	SSEHPLKGNSQARVSSLSAAVCNVPETTRLLAHVPQAADSLSEKLAEPLLFQHWDHSRQCAIWIASDGTRVRCVTVTGLSGVEMADMWVSFGERISRAGFNLSAQLVRDIIEAEIDVSVALVH*
Ga0070668_1012906332	3300005347	Switchgrass Rhizosphere	VLARVPQAAGSLGGKRTEPMLFQHWDDSTQRAIWLASDGIHVRCITITGLSVLEMGDMWVSFGERISRARFNLSPQLVREIIEAEIDVSVSLVN*
Ga0070688_1006777301	3300005365	Switchgrass Rhizosphere	WDELTQRAIWIASDGSRVRCVTVTGLSVYEMADMWLSFNERIIRAAFNLSPQLVREIIEAEIDVPVALVN*
Ga0070667_1013237652	3300005367	Switchgrass Rhizosphere	VSSLSAALCNGPETARLLARVPGAEGTLGEKLGEPLLFQHWDDSTQRAIWIASDGIRVRCVTVTGLSVLEMADMWVSFGERISRAKFNLSPQLVREIIEAEIEVSV
Ga0070667_1019691911	3300005367	Switchgrass Rhizosphere	IGRSLTSSTAGEPRVADLQSRLQTRITSLSAALSDAPETDRLLAEVPQAAAIREKLAEPLLFQHWDEPTQRAIWIASDGSHVRCVTVTGLSALEMADMWLSFNQRLLRAKFNLSAQLVREIIEAEIDVSVVLVS*
Ga0070713_1001195471	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	SNSQARVSSLSAAICNVPETSRLLACVPQAAGSLREKLAEPLLFQHWDDSTQCAIWIASDGTHVRCVTVAGLSMLEMADMWVSFGERISRARFNLSVQLVRDIIEAEIDVPVELVN*
Ga0070713_1015687091	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	PLLFQHWDDYTQCAIWIASNGTHVRCVTVTGLSGVEMADMWVSFGERISRARFNLSAQLVRDIIEAEIDVPVALVN*
Ga0070710_107109242	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	EIREKLTEPLLFQHWDELTQRAIWIASDGSHVRCVTVTGLSVHEMADMWVSFNERILRAAFNLSPQLMREIIEAEIDVSVALVN*
Ga0070711_1019464392	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	NSQARVASLSAAIGDVPETTRLLACVPQAADSLSEKLAEPLLFQHWDDSTQCAIWIASDGTHVRCVTVTGLSVLEMADMWVSFGERISRARFNLSAQLVRDIIEAEIDVSVALVN*
Ga0070730_109417411	3300005537	Surface Soil	TLSEKLAEPLLFQHWDDFAQCAIWIASDGTHVRCVTVTGLSVLEMADMWVSFGERISRAKFKLSPQLLRDIIEAEIDVSVALVN*
Ga0070665_1000554695	3300005548	Switchgrass Rhizosphere	MLFQHWDDSTQRAIWLASDGIHVRCITITGLSVLEMGDMWVSFGERISRARFNLSPQLVREIIEAEIDVSVSLVN*
Ga0070665_1015832291	3300005548	Switchgrass Rhizosphere	VPLAGEIREKLTEPLLFQHWDELTQRAIWIASDGSHVRCVTITGLSVHEMADMWLSFNERIIRAEFNLSPQLVREIIEAEIDVSVALVN*
Ga0078972_10251521	3300005573	Hot Spring	LEAAPHAAEIRDKLIEPLLVQHWDEPSQRAIWIASDGSRARCVTVSGLSTSEMADMWVSFNERLSRAKFNLSPQLVREIIEAEIDVSVVLVN*
Ga0068857_1004264151	3300005577	Corn Rhizosphere	VSSLSAALCNGPETARLLARVPGAEGTLGEKLGEPLLFQHWDDSTQRAIWIASDGIRVRCVTVTGLSVLEMADMWVSFGERISRAKFNLSPQLVREIIEAEIEVSVLLVN*
Ga0068856_1013393461	3300005614	Corn Rhizosphere	RVSSLSAAICNARETARLLARVPEAANTLSEKLAEPLLFQHWDESTQCAIWIASDGTHVRCVTVTGLSVLEMADMWVSFGQRISRARFNLSPQLLRDIIEAEIDISVALVN*
Ga0068859_1008078841	3300005617	Switchgrass Rhizosphere	VPETTRLLAEVPHLGQIREKLSQPLLFQHWDERTERAIWIASDGIHVRCVTVSGLSVLEMADMWVSFNERLSRAKFNLSPQLVREIIEAEIDVSVVLVN*
Ga0068861_1005190032	3300005719	Switchgrass Rhizosphere	LSAALCNGPETARLLARVPGAEGTLGEKLGEPLLFQHWDDSTQRAIWIASDGIRVRCVTVTGLSVLEMADMWVSFGERISRAKFNLSPQLVREIIEAEIEVSVLLVN*
Ga0068861_1024748331	3300005719	Switchgrass Rhizosphere	VRIGWSLTSAAGPRHVVDFQHRLQTRITSLSAALSDVPETSRLLATVPQADAIRDKLAEPLLFQHWDELTQRAIWIASDGSHVRCVTVTGLSVLEMADMWVSFNERLSRARFNLSPQLVREIIEAEIDVSVVL
Ga0068858_1000276136	3300005842	Switchgrass Rhizosphere	VRIGRSLTSAPGPRHVVDLQNRLQTRITSLSAALSDVPETSRLLATVPRADAIRDKLAEPLLFQHWDELTQRAIWIASDGNHVRCVTVTGLSVLELADMWVSFNERLSRARFNLSPQLVREIIEAEIDVSVVLVN*
Ga0068860_1005112821	3300005843	Switchgrass Rhizosphere	ITSLSAALCDIPETSRLLATIPQADAIRDKLAEPLLFQHWDELTQRAIWIASDGSHVRCVTVTGLSVLEMADMWVSFNERLSRARFNLSPQLVREIIEAEIDVSVVLVN*
Ga0068862_1002933753	3300005844	Switchgrass Rhizosphere	VLETTRLLAEVPQLSQIREKLAEPLLFQHWDEPTQRAIWIASDGIQVRCVTVTGLSVHEMADMWVSVNERLSRAKFNLSPQLVREIIEAEIDVSVALVN*
Ga0097621_1001326512	3300006237	Miscanthus Rhizosphere	VDLQNRSQTRITSLSAALCDVPETSRLLATVPQADAIRDKLSEPLLFQHWDELTQRAIWIASDGSHVRCVTVTGLSVLEMADMWVSFNERLSRARFNLSPQLVREIIEAEIDVSVVLVN*
Ga0097621_1003672953	3300006237	Miscanthus Rhizosphere	VGEIREKLAEPLLFQHWDDLTQRAIWIASDGSHVRCVTVTGLSALEMADMWVSFNVRIQRAAFNLSPQLVRDIIEAE
Ga0075424_1008979371	3300006904	Populus Rhizosphere	IREKLAEPLLFQHWDERAQRAIWIAGDGSYVRCVTVTGLSAHEMADMWVSFNERLSRAKFNLSPQLVREIIEAEIDVAVVLVN*
Ga0079219_107345321	3300006954	Agricultural Soil	LAAGLQNRSQTRITSLSAEISNVLETNRLLAEVPQFGQIREKLAEPLLFQHWDERSQRAIWIAGDGSHVRCVTVTGLSAHEMADMWVSFNERLSRAKFNLSPQLVREIIEAEIDVSVVLVN*
Ga0105240_101929371	3300009093	Corn Rhizosphere	VPQAAGTLSEKLAEPLLFQHWDDSTQCAIWIASDGTHVRCVTVTGLSMLEMADMWVSFGERISRARFNLSAQLVRDIIEAEIDVSVALVN*
Ga0105240_111958612	3300009093	Corn Rhizosphere	CVPQAAGSLRKKLAEPLLFQHWDDSTQCAIWIASDGTHVRCVTVTGLSALEMADMWVSFGERISRARFNLSAQLVRDIIEAEIDVSVALVN*
Ga0105240_113644752	3300009093	Corn Rhizosphere	VDSLNRPQTRISSLSATISNPVETSRLLAAAPQAAEIRGRLLEPLLFQHWDELAQRAIWIASDGSRARCVIVTGLSTSEMADMWVSFNERLSRAKFNLSPQLVREIIEAEIDVSVVLVN*
Ga0105240_118258812	3300009093	Corn Rhizosphere	PRVADLRSRLQTRITSLSAALCDASETSRLLAEVPQAAAIREKLAEPFLFQHWDDLTERAIWIASDGSHVRCVTVTGLSALEMADMWLSFNQRLSRAKFNLSPQLVREIIEAEIDVSVVLVS*
Ga0105247_100297922	3300009101	Switchgrass Rhizosphere	VDLQNRLQTRITSLSAALSDVPETSRLLATVPRADAIRDKLAEPLLFQHWDELTQRAIWIASDGNHVRCVTVTGLSVLELADMWVSFNERLSRARFNLSPQLVREIIEAEIDVSVVLVN*
Ga0105241_102463672	3300009174	Corn Rhizosphere	VRIGRGLTSAAGAGRVVDLRIRLQTRITSLSAALSDIPETSRLLATVPQAEAIRDKLAEPLLFQHWDELTERAIWIASDGSHLRCVTVTGLSVIEMADMWVSFNERLSRARFNLSPQLVREIIEAEIDVSVVLVN*
Ga0105248_125907841	3300009177	Switchgrass Rhizosphere	QHWDEPTQRAIWIASDGSHVRCVTVTGLSALEMADMWLSFNQRLLRAKFNLSAQLVREIIEAEIDVSVVLVS*
Ga0105237_100233565	3300009545	Corn Rhizosphere	VRIGWSLTSAAGPRDAVDLQTRLQTRITSLSAALSDVPETSRLLATIPQADAIRDKLAEPLLFQHWDELTQRAIWIASDGSHVRCVTVTGLSVLELADMWVSFNERLSRARFNLSPQLVREIIEAEIDVSVVLVN*
Ga0105237_101722103	3300009545	Corn Rhizosphere	VPQAAGSLRKKLAEPLLFQHWDDSTQCAIWIASDGTHVRCVTVTGLSALEMADMWVSFGERISRARFNLSAQLVRDIIEAEIDVSVALVN*
Ga0105237_104966722	3300009545	Corn Rhizosphere	VDLQKRLQTRITSLSAALSDIPETSRLLATVPQAGAIRDKLAEPLLFQHWDELTQRAIWIASDGSHVRCVTVTGLSVLEMADMWVSFNERLSRAKFNLSPQLVREIIEAEIDVSVVLVN*
Ga0105237_115380382	3300009545	Corn Rhizosphere	NRSQTRITSLSAALSDVPETSRLLATVPHADAIRDKLAEPLLFQHWDELTQRAIWIASDGNHVRCVTVTGLSVLELADMWVSFNERLSRARFNLSPQLVREIIEAEIDVSVVLVN*
Ga0105237_115502792	3300009545	Corn Rhizosphere	LKDRAQTRIASLSAALSSVPETARLLAEVPQLDQIRDKLAEPLLFQHWDELAQRAIWIASDGSQVRCVTVTGLSVHEMADMWLSFNQRLSRAGFNLSPQ
Ga0105238_101198332	3300009551	Corn Rhizosphere	LAEVPQLGQIREKLSQPLLFQHWDEITQRAIWVASDGSHWRCVTVTGLSVHEMADLWMSFNERLSRARFNLSPQLLREIIEAETDFSVALVN*
Ga0105238_110834082	3300009551	Corn Rhizosphere	LQSRSPTRITSLSAELSNVLETTRLLAEVPQLGQIREKLAEPLLFQHWDELTQRAIWIASDGSHVRCVTVSGLSVHEMADMWVSFNERLSRAKFNLSPQLVREIIEAEIDVSVALVC*
Ga0105238_113127401	3300009551	Corn Rhizosphere	VPQAAGSLRKKLAEPLLFQHWDDSTQCAIWIASDGTHVRCVTVTGLSVLEMADMWVSFGERISRARFNLSVQLVRDIIEAEIDVSVELVN*
Ga0105249_101649254	3300009553	Switchgrass Rhizosphere	VDSPTRAQTRIASLSAAISNVLETTRLLAEVPQAHEIRDKLTEPLLFQHWDELTQRAIWIASDGSRVRCVTVTGLSVYEMADMWLSFNERIIRAAFNLSPQLVREIIEAEIDVPVALVN*
Ga0105249_117348781	3300009553	Switchgrass Rhizosphere	VLETTRLLAEVPQLSQIREKLAEPLLFQHWDEPTQRAIWIASDGIQVRCVTVTGLSVHEMADMWVSVNERLSRAKFNLSPQLVREIIEAEIDVS
Ga0105249_128900562	3300009553	Switchgrass Rhizosphere	ITSLSAAISNVPETTRLLAEVPHLGQIREKLSQPLLFQHWDERTERAIWIASDGIHVRCVTVSGLSVLEMADMWVSFNERLSRAKFNLSPQLVREIIEAEIDVSVALVN*
Ga0134125_102351292	3300010371	Terrestrial Soil	VDSPTRAQTRIASLSAAISNVLETTRLLAEVPQAHEIREKLTEPLLFQHWDELTQRAIWIASDGSRVRCVTVTGLSVYEMADMWLSFNERIIRAAFNLSPQLVREIIEAEIDVPVALVN*
Ga0134125_116295111	3300010371	Terrestrial Soil	LLARVPQAADTLSEKLAEPLFFQHWDESTQCAIWIASDGTHVRCVTVTGLSVLEMADMWVSFDERISRAGFNLSPQLLRDIIEAEIEVSVALVN*
Ga0134125_123655752	3300010371	Terrestrial Soil	VPQVCEIREKLTEPLLFQHWDELTQRAIWIASDGSQVRCVTVTGLSVHEMADMWVSFNVRIRRAAFNLSPQLVREIIEAEIDVPVALVN*
Ga0105239_103709302	3300010375	Corn Rhizosphere	LQTRITSLTAALGDASETSRLLAEVPQAAAIREKLAEPFLFQHWDDLTERAIWIASDGSHVRCVTVTGLSALEMADMWLSFNQRLSRAKFNLSPQLVRDIIEAEIDVSVVLVS*
Ga0105239_104669912	3300010375	Corn Rhizosphere	VQSRSETRVTSLSAAISDTFETARLLADVPQIRDKLAERLLFQHWDEPTQRAIWIASDGSHVRRVTVTGLSVLEMADMWVSFNERLSRAKFNLSPQLVREIIEAEIDVSVTLVN*
Ga0105239_119293771	3300010375	Corn Rhizosphere	LQNRLQTRITSLSAALCDIPETSRLLATIPQADAIRDKLAEPLLFQHWDELTQRAIWIASDGSHVRCVTVTGLSVLELADMWVSFNERLSRARFNLSPQLVREIIEAEIDVSVVLVN*
Ga0134126_107864863	3300010396	Terrestrial Soil	AADTLSEKLAEPLFFQHWDESTQCAIWIASDGTHVRCVTVTGLSVLEMADMWVSFDERISRAGFNLSPQLLRDIIEAEIDVSVALVH*
Ga0134121_106487072	3300010401	Terrestrial Soil	DLQNRLQTRITSLSAALSDVPETSRLLATVPRADAIRDKLAEPLLFQHWDELTQRAIWIASDGNHVRCVTVTGLSVLELADMWVSFNERLSRARFNLSPQLVREIIEAEIDVSVVLVN*
Ga0134121_120752181	3300010401	Terrestrial Soil	LQNRAQTRISSLSAAVSNALETTRLLAEVPQVGEIREKLAEPLLFQHWDDLTQRAIWIASDGSHVRCVTVTGLSALEMADMWVSFNVRIQRAAFNLSPQLVRDIIEAEIDVSVALVN*
Ga0105246_118896401	3300011119	Miscanthus Rhizosphere	VGVQSRVQTRVTSLSAALSNGPETTRLLAEVPQAGAIREKLAEPLLFQHWDELTQRAIWIASDGTHVRCVTVSGLSVHEMADMWLSLNVRISRAKFNLSPQLVREIIEAEIDVSVALVN*
Ga0150983_100129132	3300011120	Forest Soil	VPQLDQIRDKLSEPLFFQHWDELTQRAIWIASDGSQVRCVTVTGLSVHEMADMWVSFNERLSRARFSLSPQLVREIIEAEIDVSVALVH*
Ga0150985_1139122452	3300012212	Avena Fatua Rhizosphere	VTLGEKLGEPLLFQHWDDSTERAIWIASDGIQVRCVTVTGLSVLEMADMWVSFGERISRAKFDLSAQLVRDIIEAEIDVSVSLVN*
Ga0150984_1040350472	3300012469	Avena Fatua Rhizosphere	CNGPETARLLARVPGAVGTLGEKLGEALLFQHWDDSTQRAIWIASDGIRVRCVTVTGLSVFEMADMWVSFGERISRAKFNLSPQLVREIIEAEIEVSVLLVN*
Ga0150984_1166490281	3300012469	Avena Fatua Rhizosphere	VTLGEKLGEPLLFQHWDDSTERAIWIASDGIHVRCVTVSGLSVLEMADMWVSFGERISRAKFDLSAQLVRDIIEAEIDVSVSLVN*
Ga0168317_10387312	3300012982	Weathered Mine Tailings	LFQHWDESTQCAIWIASDGTHVRCVTVTGLSVLEMADMWVSFGERISRARFNLTPQLLRDIIEAEIDVSVALVH*
Ga0157369_113463571	3300013105	Corn Rhizosphere	TTRLLAHVPQAADSLSEKLAEPLLFQHWDHSRQCAIWIASDGTRVRCVTVTGLSGVEMADMWVSFGERISRAGFNLSAQLVRDIIEAEIDVSVALVH*
Ga0163162_100486015	3300013306	Switchgrass Rhizosphere	VDSPTRAQTRIASLSAAISNVLETTRLLAEVPQAHEIREKLIEPLLFQHWDELTQRAIWIASDGSRVRCVTVTGLSVYEMADMWLSFNERIIRAAFNLSPQLVREIIEAEIDVPVALVN*
Ga0157372_107118342	3300013307	Corn Rhizosphere	WDELTQRAIWIASDGSHVRCVTVTGLSVLELADMWVSFNERLSRAKFNLSPQLVREIIEAEIDVSVVLVN*
Ga0157375_133944972	3300013308	Miscanthus Rhizosphere	IPETSRLLATIPQADAIRDKLAEPLLFQHWDELTQRAIWIASDGSHVRCVTVTGLSVLEMADMWVSFNERLSRARFNLSPQLVREIIEAEIDVSVVLVN*
Ga0181534_100068537	3300014168	Bog	VPEATDLQSKLTEPLLFQHWDEHRQRAIWIASDGIRVRCVTVSGLCALEMASMWVSFNERITRAHFNLSPQLVRDIIEAEIDVSVALVN*
Ga0157379_114469461	3300014968	Switchgrass Rhizosphere	TRAQTRIASLSAAISNVLETTRLLAEVPQAHEIREKLTEPLLFQHWDELTQRAIWIASDGSRVRCVTVTGLSVYEMADMWLSFNERIIRAAFNLSPQLVREIIEAEIDVPVALVN*
Ga0187809_100351302	3300017937	Freshwater Sediment	VDPLKRPQTRISSQSAAVSNPAETTRLLAETPHAAEIRARLIEPLLFQHWDELAQRAIWIASDGTQARCVTVTGLSTSEMADMWVSFNERLSRAKFNLSPQLVREIIEAEIDVSVVLVN
Ga0210406_105842861	3300021168	Soil	ETDRLLAEVPQAGAIREKLAEPLLFQHWDELTQRAIWIASDGSHVRCVTVTGLSVLEMADMWLSFNQRLSRAKFNLSPQLVREIIEAEIDVSVVLVS
Ga0247778_100077424	3300022894	Plant Litter	VPQVLNFRDKLGEPLLFQHWDDHTQRAIWIASDGNQVRCITVAGLTVHEMADMWLSFNQRISRAHFNLSPQLVREIIEAEIDVSVALVN
Ga0247778_10089053	3300022894	Plant Litter	LQDRTQTRISSLSAALSSVPETTRLLAEVPQLDQIRDKLAEPLLFQHWDELAQRAVWIASDGSQVRCVTVTGLSVHEMADMWLSFNQRLSRAGFNLSPQLVREIIEAEIDVSVALVN
Ga0247778_11804981	3300022894	Plant Litter	LQTRITSLSAALSDVTETTRLLAEVPQAGAIREKLAEPLLFQHWDELTERAIWIASDGSHVRCVTVTGLSVLEMADMWVSLNQRLSRAKFNLSPQLVREI
Ga0247764_10451114	3300022897	Plant Litter	LQTRITSLSAALSDVTETTRLLAEVPQAGAIREKLAEPLLFQHWDELTERAIWIASDGRHVRCVTVTGLSVLEMADMWVSLNQRLSRAKFNLSPQLVREIIEAEIDVSVVLVN
Ga0247764_11040022	3300022897	Plant Litter	DLQSRLQTRITSLSAALSDVTETTRLLAQVPQAGAIREKLAEPLLFQHWDELTQRAIWIASDGSHVRCVTVTGLSVLEMADMWLSFNQRLSRAKFNLSPQLVREIIEAEIDVSVVLVN
Ga0247777_100007627	3300022917	Plant Litter	LKDRAQTRIASLSAALSSVPETARLLAEVPQLDQIRDKLAEPLLFQHWDELAQRAIWIASDGSQVRCVTVTGLSVHEMADMWLSFNQRLSRAGFNLSPQLVREIIEAEIDVSVALVN
Ga0247777_10388252	3300022917	Plant Litter	LSATIGNGAETALILARVPEAAHSLGDKLGEPLLFQHWDDSTQRAIWIASDGIHVRCVTVAGLSVHEMADMWVSFGERISRAKFNLSPQLVREIIEAEIDVAVALVN
Ga0247777_10506204	3300022917	Plant Litter	VSSLSAALSDVPETTRLLAEVPQAEAIREKLAEPLLFQHWDELTERAIWIASDGSYVRCVTVTGLSAHEMADMWLSFNVRISRAKFNLSPQLVR
Ga0247791_10450772	3300023062	Soil	LCATRIGRSLTSAAGLSRVAVLKDRAQTRIASLSAALSSVPETARLLAEVPQLDQIRDKLAEPLLFQHWDELAQRAIWIASDGSQVRCVTVTGLSVHEMADMWLSFNQRLSRAGFNLSPQLVREIIEAEIDVSVALVN
Ga0247765_10040786	3300023268	Plant Litter	LQDRAQTRISSLSAALSSVPETTRLLAEVPQLDQIRDKLAEPLLFQHWDELAQRAVWIASDGSQVRCVTVTGLSVHEMADMWLSFNQRLSRAGFNLSPQLVREIIEAEIDVSVALVN
Ga0247784_10118321	3300023270	Plant Litter	QIRDKLAEPLLFQHWDELAQRAIWIASDGSQVRCVTVTGLSVHEMADMWLSFNQRLSRAGFNLSPQLVREIIEAEIDVSVALVN
Ga0247784_10665662	3300023270	Plant Litter	LQTRITSLSAALSDVTETTRLLAEVPQAGAIREKLAEPLLFQHWDELTERAIWIASDGSHVRCVTVTGLSVLEMADMWVSLNQRLSRAKFNLSPQLVREIIEAEIDVSVVLVN
Ga0207710_1000032433	3300025900	Switchgrass Rhizosphere	VDSPTRAQTRIASLSAAISNVLETTRLLAEVPQAHEIREKLTEPLLFQHWDELTQRAIWIASDGSHVRCVTVTGLSAYEMADMWLSFNERIIRAAFNLSPQLVREIIEAEIDVPVALVN
Ga0207710_100182732	3300025900	Switchgrass Rhizosphere	VRIGRSLTSAPGPRHVVDLQNRLQTRITSLSAALSDVPETSRLLATVPRADAIRDKLAEPLLFQHWDELTQRAIWIASDGNHVRCVTVTGLSVLELADMWVSFNERLSRARFNLSPQLVREIIEAEIDVSVVLVN
Ga0207680_106118242	3300025903	Switchgrass Rhizosphere	LQNRLQTRITSLSAALCDIPETSRLLATIPQADAIRDKLAEPLLFQHWDELTQRAIWIASDGSHVRCVTVTGLSVLEMADMWVSFNERLSRARFNLSPQLVREIIEAEIDVSVVLVN
Ga0207654_101287644	3300025911	Corn Rhizosphere	VDLRIRLQTRITSLSAALSDIPETSRLLATVPQAEAIRDKLAEPLLFQHWDELTERAIWIASDGSHLRCVTVTGLSVIEMADMWVSFNERLSRANFNLSPQLVREIIEAEIDVTVVLVN
Ga0207654_106467791	3300025911	Corn Rhizosphere	QAGAIRDKLAEPLLFQHWDELTQRAIWIASDGSHVRCVTVTGLSVLEMADMWVSFNERLSRAKFNLSPQLVREIIEAEIDVSVVLVN
Ga0207654_112457622	3300025911	Corn Rhizosphere	KSNSQARVASLSAAICDVPETTRLLACVPQAAGALSEKLAEPLLFQHWDDSTQCAIWIASDGTHVRCVTVTGLSVLEMADMWVSFGERISRARFNLSAQLVRDIIEAEIDVSVALVN
Ga0207707_103503953	3300025912	Corn Rhizosphere	VPQAADSLSEKLAEPLLFQHWDHSRQCAIWIASDGTRVRCVTVTGLSGVEMADMWVSFGERISRAGFNLSAQLVRDIIEAEIDVSVALVH
Ga0207695_109793062	3300025913	Corn Rhizosphere	KLAEPLLFQHWDDSTQCAIWIASDGTHVRCVTVTGLSVLEMADMWVSFGERISRASFNLSAQLVRDIIEAEIDVSVALVN
Ga0207695_112579201	3300025913	Corn Rhizosphere	DLRSRLQTRITSLSAALCDASETSRLLAEVPQAAAIREKLAEPFLFQHWDDLTERAIWIASDGSHVRCVTVTGLSALEMADMWLSFNQRLSRAKFNLSPQLVREIIEAEIDVSVVLVS
Ga0207671_100132505	3300025914	Corn Rhizosphere	VRIGWSLTSAAGPRDAVDLQTRLQTRITSLSAALSDVPETSRLLATIPQADAIRDKLAEPLLFQHWDELTQRAIWIASDGSHVRCVTVTGLSVLELADMWVSFNERLSRARFNLSPQLVREIIEAEIDVSVVLVN
Ga0207671_100302272	3300025914	Corn Rhizosphere	VDLQKRLQTRITSLSAALSDIPETSRLLATVPQAGAIRDKLAEPLLFQHWDELTQRAIWIASDGSHVRCVTVTGLSVLEMADMWVSFNERLSRAKFNLSPQLVREIIEAEIDVSVVLVN
Ga0207671_113243641	3300025914	Corn Rhizosphere	LSAAICNVPETTRLLACVPQAAGSLRKKLAEPLLFQHWDDSTQCAIWIASDGTHVRCVTVTGLSALEMADMWVSFGERISRARFNLSAQLVRDIIEAEIDVSVALVN
Ga0207652_101802524	3300025921	Corn Rhizosphere	LLAHVPQAADSLSEKLAEPLLFQHWDHSRQCAIWIASDGTRVRCVTVTGLSGVEMADMWVSFGERISRAGFNLSAQLVRDIIEAEIDVSVALVH
Ga0207694_102564022	3300025924	Corn Rhizosphere	LAEVPQLGQIREKLSQPLLFQHWDEITQRAIWVASDGSHWRCVTVTGLSVHEMADLWMSFNERLSRARFNLSPQLLREIIEAETDFSVALVN
Ga0207650_102642532	3300025925	Switchgrass Rhizosphere	LQNRLQTRITSLSAALCDIPETSRLLATIPQADAIRDKLAEPLLFQHWDELTQRAIWIASDGIHVRCVTVTGLSVFEMADMWVSFGERISRAKFNLSPQLVREIIEAEIEVSVLLVN
Ga0207700_101057382	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	VPQAAGSLREKLAEPLLFQHWDDSTQCAIWIASDGTHVRCVTVAGLSMLEMADMWVSFGERISRARFNLSVQLVRDIIEAEIDVPVELVN
Ga0207689_109838152	3300025942	Miscanthus Rhizosphere	LQYLSSLSAALCNGPETARLLARVPGAEGTLGEKLGEPLLFQHWDDSTQRAIWIASDGIRVRCVTVTGLSVLEMADMWVSFGERISRAKFNLSPQLVREIIEAEIEVSVLLVN
Ga0207668_103475454	3300025972	Switchgrass Rhizosphere	RTQNRSPTRITSLSAAISNVPETTRLLAEVPHLGQIREKLSQPLLFQHWDERTERAIWIASDGIHVRCVTVSGLSVLEMADMWVSFNERLSRAKFNLSPQLVREIIEAEIDVSVALVN
Ga0207668_116778532	3300025972	Switchgrass Rhizosphere	MLFQHWDDSTQRAIWLASDGIHVRCITITGLSVLEMGDMWVSFGERISRARFNLSPQLVREIIEAEIDVSVSLVN
Ga0207658_108483421	3300025986	Switchgrass Rhizosphere	MARVPGAEGTLGEKLGEPLLFQHWDDSTQRAIWIASDGIRVRCVTVTGLSVLEMADMWVSFGERISRAKFNLSPQLVREIIEAEIEVSVLLVN
Ga0207658_113361841	3300025986	Switchgrass Rhizosphere	SASGRPPTVDSPTRAQTRIASLSAAISNVLETTRLLAEVPQAHEIREKLTEPLLFQHWDELTQRAIWIASDGSRVRCVTVTGLSVYEMADMWLSFNERIIRAAFNLSPQLVREIIEAEIDVPVALVN
Ga0207703_106724842	3300026035	Switchgrass Rhizosphere	MFSPPRHPLKGDSQARVASLSAAICNAPETARLLARVPQAADTLSEKLAEPLFFQHWDESTQCAIWIASDGTHVRCVTVTGLSVLEMADMWVSFDERISRAGFNLSPQLLRDIIEAEIDVSVALVH
Ga0207703_108217601	3300026035	Switchgrass Rhizosphere	VSSLSAALCNGPETARLLARVPGAEGTLGEKLGEPLLFQHWDDSTQRAIWIASDGIRVRCVTVTGLSVLEMADMWVSFGERISRAKFNLSPQLVREIIEAEIEVSVLLVN
Ga0207703_113930792	3300026035	Switchgrass Rhizosphere	LSAEIANVLETNRLLAEVPQFGQIREKLAEPLLFQHWDERSQRAIWIAGDGSHVRCVTVTGLSAHEMADMWVSFNERLSRAKFNLSPQLVREIIEAEIDVSVVLVN
Ga0207702_104897291	3300026078	Corn Rhizosphere	LQNRLQTRITSLSAALCDIPETSRLLATIPQADAIRDKLAEPLLFQHWDELTQRAIWIASDGSHVRCVTVTGLSVLEMVDMWVSFNERLSRARFNLSPQLVREIIEAEIDVSVVLVN
Ga0207702_105200192	3300026078	Corn Rhizosphere	VPQAAGSLREKLAEPLLFQHWDDSTQCAIWIASDGTHVRCVTVTGLSVLEMADMWVSFGQRISRARFNLSPQLLRDIIEAEIDISVALVN
Ga0209574_101375042	3300027809	Agave	VDLQGRLQTRVTSLSAALSNIPETARLLAEVPQVGAIREKLAEPLLFQHWDELTERAIWIASNGSHVRCVTVTGLSVHEMADMWVSFNERLSRAKFNLSPQLVREIIEAEIDVSVALVN
Ga0209574_102594091	3300027809	Agave	VFEAEKLAEPLLFQHWDEPTQRAIWIASDGRHVRCVTVTGLSVHEMADMWVSFNERLSRAKFNLSPQLVREIIEAEIDVSVVLVN
Ga0207433_101796201	3300027863	Hot Spring	LEAAPHAAEIRDKLIEPLLVQHWDEPSQRAIWIASDGSRARCVTVSGLSTSEMADMWVSFNERLSRAKFNLSPQLVREIIEAEIDVSVVLVN
Ga0209579_105465421	3300027869	Surface Soil	VITNVPETTRLLAEVPQLDQIRDKLSEPLLFQHWDELTQRAIWIASDGSQVRCVTVTGLSVHEMADMWVSFNERLSRARFSLSPQLVREIIEAEID
Ga0268266_104779692	3300028379	Switchgrass Rhizosphere	VDSPTRAQTRIASLSAAISNVLETTRLLAEVPQAHEIREKLTEPLLFQHWDELTQRAIWIASDGSRVRCVTVTGLSVYEMADMWLSFNERIIRAAFNLSPQLVREIIEAEIDVPVALVN
Ga0268265_101982533	3300028380	Switchgrass Rhizosphere	VLETTRLLAEVPQLSQIREKLAEPLLFQHWDEPTQRAIWIASDGIQVRCVTVTGLSVHEMADMWVSVNERLSRAKFNLSPQLVREIIEAEIDVSVALVN
Ga0268264_104608341	3300028381	Switchgrass Rhizosphere	ITSLSAALCDIPETSRLLATIPQADAIRDKLAEPLLFQHWDELTQRAIWIASDGSHVRCVTVTGLSVLEMADMWVSFNERLSRARFNLSPQLVREIIEAEIDVSVVLVN
Ga0268264_117800732	3300028381	Switchgrass Rhizosphere	SAAISNVLETTRLLAEVPQAHEIREKLTEPLLFQHWDELTQRAIWIASDGSRVRCVTVTGLSVYEMADMWLSFNERIIRAAFNLSPQLVREIIEAEIDVPVALVN
Ga0268264_120699562	3300028381	Switchgrass Rhizosphere	VLETTRLLAEVPQLSQIREKLAEPLLFQHWDEPTQRAIWIASDGIQVRCVTVTGLSVHEMADMWVSVNERLSRAKFNLSPQLVREIIEAEI
Ga0265334_100221994	3300028573	Rhizosphere	VIANVPETTRLLAEVPQLDQIRDKLSEPLLFQHWDDLTQRAIWIASDGSQVRCVTVTGLSVHEMADMWVSFNERLSRARFSLSPQLVREIIEAEIDVSVALVH
Ga0307374_103512833	3300031670	Soil	EPLLFQHWDEHTQRAIWIASDGSRARCVTVSGLSTSEMADMWVSFNERLSRAKFNLSPQLVREIIEAEIDVSVVLVN
Ga0302321_1004636232	3300031726	Fen	LQSRLQTRITSLSAALSDAPETNRLLAEVPQAAAIREKLAEPLLFQHWDELTQRAIWIASDGTQVRCVTVTGLSALEMADMWLSFNQRLLRAKFNLSPQLVREIIEAEIDVSVVLVS
Ga0315298_10308725	3300031749	Hot Spring Microbial Mat	VETARLLEAAPHAAEIRDKLIEPLLVQHWDEPSQRAIWIASDGSRARCVTVSGLSTSEMADMWVSFNERLSRAKFNLSPQLVREIIEAEIDVSVVLVN
Ga0308176_118025841	3300031996	Soil	VDLHSRSPTRIASLSAAISNIPETTRLLAEVPQAGAIREKLTEPLLFQHWDELTQRAIWIASDGCHVRCVTVTGLSVHEMADMWLSFNERISRANFNLSPQLVREIIEAEIDVSVALVN
Ga0335070_100022843	3300032829	Soil	VCEIREKLAEPLLFQHWDELTQRAIWIAGDGSHVRCVTVTGLSSHEMADMWVSFNVRIIRAAFNLSPQLVRDIIESEIDVSVALVN
Ga0335083_101618335	3300032954	Soil	CVPQAVDSLSEKLVEPLLFQHWDDSTQCAIWIASDGTHVRCVTVTGLSVLEMADMWVSFGERISRARFNLSAQLVRDIIEAEIDVPVALVN

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F060081

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences