Metagenome Family F060050

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F060050
Family Type	Metagenome
Number of Sequences	133
Average Sequence Length	47 residues
Representative Sequence	MTDTQKLERLAFLANLPYCKHTSEDWDEELRLECELQDHPQYKSFLDQ
Number of Associated Samples	71
Number of Associated Scaffolds	133

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	68.42 %
% of genes near scaffold ends (potentially truncated)	24.06 %
% of genes from short scaffolds (< 2000 bps)	69.17 %
Associated GOLD sequencing projects	61
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.69

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (31.579 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine (38.346 % of family members)
Environment Ontology (ENVO)	Unclassified (87.970 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (95.489 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 48.68% β-sheet: 0.00% Coil/Unstructured: 51.32%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.69
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.69
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 133 Family Scaffolds
PF14090	HTH_39	21.05
PF09588	YqaJ	17.29
PF03837	RecT	4.51
PF10263	SprT-like	3.01
PF01695	IstB_IS21	1.50
PF14549	P22_Cro	1.50
PF03237	Terminase_6N	1.50
PF09811	Yae1_N	0.75
PF00583	Acetyltransf_1	0.75
PF12236	Head-tail_con	0.75

COG ID	Name	Functional Category	% Frequency in 133 Family Scaffolds
COG3723	Recombinational DNA repair protein RecT	Replication, recombination and repair [L]	4.51
COG1484	DNA replication protein DnaC	Replication, recombination and repair [L]	1.50

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	69.92 %
Unclassified	root	N/A	30.08 %

Name	Rank	Taxonomy	Distribution
Viruses	superkingdom	All Organisms → Viruses	38.35 %
cellular organisms	root	All Organisms → cellular organisms	31.58 %
Unclassified	root	N/A	30.08 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	31.58 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	30.83 %
Unclassified	root	N/A	30.08 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	6.77 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	30.83 %
Unclassified	root	N/A	30.08 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	21.05 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	6.77 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	3.76 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	30.83 %
Unclassified	root	N/A	30.08 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	12.03 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	8.27 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	6.77 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	3.76 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	30.83 %
Unclassified	root	N/A	30.08 %
Pseudomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales	12.03 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	8.27 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	6.77 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	3.76 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	30.83 %
Unclassified	root	N/A	30.08 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	8.27 %
Marinobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Marinobacteraceae	8.27 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	3.76 %
unclassified Pseudomonadales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → unclassified Pseudomonadales	3.76 %
Caudovirales	order	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	3.01 %
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	1.50 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	30.83 %
Unclassified	root	N/A	30.08 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	8.27 %
Marinobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Marinobacteraceae → Marinobacter	8.27 %
Pseudomonadales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → unclassified Pseudomonadales → Pseudomonadales bacterium	3.76 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	3.76 %
Siphoviridae	family	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Siphoviridae	3.01 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1.50 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	30.83 %
Unclassified	root	N/A	30.08 %
unclassified Marinobacter	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Marinobacteraceae → Marinobacter → unclassified Marinobacter	8.27 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	8.27 %
Pseudomonadales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → unclassified Pseudomonadales → Pseudomonadales bacterium	3.76 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	3.76 %
unclassified Siphoviridae	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Siphoviridae → unclassified Siphoviridae	3.01 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1.50 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	30.83 %
Unclassified	root	N/A	30.08 %
Marinobacter sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Marinobacteraceae → Marinobacter → unclassified Marinobacter → Marinobacter sp.	8.27 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	8.27 %
Pseudomonadales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → unclassified Pseudomonadales → Pseudomonadales bacterium	3.76 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	3.76 %
Synechococcus phage S-CBS4	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Siphoviridae → unclassified Siphoviridae → Synechococcus phage S-CBS4	3.01 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1.50 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001957\|GOS2250_1001021	All Organisms → Viruses → Predicted Viral	1394	Open in IMG/M
3300001962\|GOS2239_1000685	All Organisms → Viruses → Predicted Viral	1181	Open in IMG/M
3300001967\|GOS2242_1028627	All Organisms → Viruses → Predicted Viral	2592	Open in IMG/M
3300002040\|GOScombined01_100157429	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1757	Open in IMG/M
3300002040\|GOScombined01_101295349	All Organisms → Viruses → Predicted Viral	1214	Open in IMG/M
3300002176\|JGI24820J26691_1000078	Not Available	23571	Open in IMG/M
3300002482\|JGI25127J35165_1004735	All Organisms → cellular organisms → Bacteria	3618	Open in IMG/M
3300002482\|JGI25127J35165_1018594	Not Available	1699	Open in IMG/M
3300002482\|JGI25127J35165_1044665	All Organisms → cellular organisms → Bacteria	976	Open in IMG/M
3300002482\|JGI25127J35165_1091524	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Marinobacteraceae → Marinobacter → unclassified Marinobacter → Marinobacter sp.	618	Open in IMG/M
3300002482\|JGI25127J35165_1118956	Not Available	523	Open in IMG/M
3300002483\|JGI25132J35274_1024030	All Organisms → Viruses → Predicted Viral	1420	Open in IMG/M
3300002488\|JGI25128J35275_1035518	Not Available	1138	Open in IMG/M
3300002488\|JGI25128J35275_1087544	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Siphoviridae → unclassified Siphoviridae → Synechococcus phage S-CBS4	636	Open in IMG/M
3300004951\|Ga0068513_1010054	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → unclassified Pseudomonadales → Pseudomonadales bacterium	995	Open in IMG/M
3300004951\|Ga0068513_1020898	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	702	Open in IMG/M
3300004951\|Ga0068513_1024068	Not Available	657	Open in IMG/M
3300005608\|Ga0066840_10035371	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Marinobacteraceae → Marinobacter → unclassified Marinobacter → Marinobacter sp.	993	Open in IMG/M
3300005608\|Ga0066840_10039695	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Siphoviridae → unclassified Siphoviridae → Synechococcus phage S-CBS4	941	Open in IMG/M
3300005608\|Ga0066840_10043695	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Marinobacteraceae → Marinobacter → unclassified Marinobacter → Marinobacter sp.	899	Open in IMG/M
3300006305\|Ga0068468_1005874	All Organisms → Viruses → Predicted Viral	1466	Open in IMG/M
3300006345\|Ga0099693_1024864	All Organisms → Viruses → Predicted Viral	3731	Open in IMG/M
3300006735\|Ga0098038_1012406	All Organisms → Viruses → Predicted Viral	3315	Open in IMG/M
3300006735\|Ga0098038_1030339	All Organisms → Viruses → Predicted Viral	2019	Open in IMG/M
3300006737\|Ga0098037_1082654	All Organisms → Viruses → Predicted Viral	1126	Open in IMG/M
3300006737\|Ga0098037_1141532	Not Available	812	Open in IMG/M
3300006737\|Ga0098037_1218897	Not Available	618	Open in IMG/M
3300006749\|Ga0098042_1001138	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	10205	Open in IMG/M
3300006749\|Ga0098042_1002932	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	6105	Open in IMG/M
3300006749\|Ga0098042_1013470	All Organisms → Viruses → Predicted Viral	2513	Open in IMG/M
3300006749\|Ga0098042_1052164	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Marinobacteraceae → Marinobacter → unclassified Marinobacter → Marinobacter sp.	1107	Open in IMG/M
3300006749\|Ga0098042_1086805	Not Available	804	Open in IMG/M
3300009593\|Ga0115011_10024107	All Organisms → Viruses → Predicted Viral	4067	Open in IMG/M
3300009593\|Ga0115011_10951128	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	723	Open in IMG/M
3300009790\|Ga0115012_10962412	Not Available	703	Open in IMG/M
3300012919\|Ga0160422_10023363	All Organisms → Viruses → Predicted Viral	3585	Open in IMG/M
3300012919\|Ga0160422_10045961	All Organisms → Viruses → Predicted Viral	2532	Open in IMG/M
3300012919\|Ga0160422_10118288	All Organisms → Viruses → Predicted Viral	1571	Open in IMG/M
3300012919\|Ga0160422_10254574	All Organisms → Viruses → Predicted Viral	1073	Open in IMG/M
3300012919\|Ga0160422_10715612	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Marinobacteraceae → Marinobacter → unclassified Marinobacter → Marinobacter sp.	639	Open in IMG/M
3300012919\|Ga0160422_11072785	Not Available	522	Open in IMG/M
3300012920\|Ga0160423_10366784	Not Available	986	Open in IMG/M
3300012920\|Ga0160423_10530110	Not Available	800	Open in IMG/M
3300012936\|Ga0163109_10586226	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	816	Open in IMG/M
3300012936\|Ga0163109_10694214	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Marinobacteraceae → Marinobacter → unclassified Marinobacter → Marinobacter sp.	744	Open in IMG/M
3300012952\|Ga0163180_10163958	All Organisms → Viruses → Predicted Viral	1488	Open in IMG/M
3300012953\|Ga0163179_11184086	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Siphoviridae → unclassified Siphoviridae → Synechococcus phage S-CBS4	675	Open in IMG/M
3300017732\|Ga0181415_1004805	Not Available	3343	Open in IMG/M
3300017739\|Ga0181433_1070954	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Marinobacteraceae → Marinobacter → unclassified Marinobacter → Marinobacter sp.	866	Open in IMG/M
3300017768\|Ga0187220_1190155	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	619	Open in IMG/M
3300017781\|Ga0181423_1069971	All Organisms → Viruses → Predicted Viral	1389	Open in IMG/M
3300020267\|Ga0211648_1000581	Not Available	13100	Open in IMG/M
3300020269\|Ga0211484_1010001	All Organisms → Viruses → Predicted Viral	2061	Open in IMG/M
3300020299\|Ga0211615_1000175	Not Available	8000	Open in IMG/M
3300020301\|Ga0211650_1011300	All Organisms → Viruses → Predicted Viral	1533	Open in IMG/M
3300020306\|Ga0211616_1011818	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Marinobacteraceae → Marinobacter → unclassified Marinobacter → Marinobacter sp.	1337	Open in IMG/M
3300020366\|Ga0211489_10124041	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → unclassified Pseudomonadales → Pseudomonadales bacterium	710	Open in IMG/M
3300020377\|Ga0211647_10181332	All Organisms → cellular organisms → Bacteria	688	Open in IMG/M
3300020380\|Ga0211498_10006381	All Organisms → cellular organisms → Bacteria → Proteobacteria	4289	Open in IMG/M
3300020380\|Ga0211498_10147234	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	889	Open in IMG/M
3300020384\|Ga0211596_10103909	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	892	Open in IMG/M
3300020387\|Ga0211590_10248914	Not Available	558	Open in IMG/M
3300020394\|Ga0211497_10148961	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → unclassified Pseudomonadales → Pseudomonadales bacterium	916	Open in IMG/M
3300020401\|Ga0211617_10005928	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	5615	Open in IMG/M
3300020401\|Ga0211617_10018596	All Organisms → Viruses → Predicted Viral	2983	Open in IMG/M
3300020401\|Ga0211617_10415964	Not Available	556	Open in IMG/M
3300020402\|Ga0211499_10168398	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	790	Open in IMG/M
3300020402\|Ga0211499_10197021	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	721	Open in IMG/M
3300020403\|Ga0211532_10268936	Not Available	662	Open in IMG/M
3300020405\|Ga0211496_10015533	All Organisms → Viruses → Predicted Viral	2705	Open in IMG/M
3300020409\|Ga0211472_10043146	All Organisms → Viruses → Predicted Viral	1754	Open in IMG/M
3300020409\|Ga0211472_10424049	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	536	Open in IMG/M
3300020410\|Ga0211699_10177142	All Organisms → cellular organisms → Bacteria	810	Open in IMG/M
3300020411\|Ga0211587_10462462	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	509	Open in IMG/M
3300020417\|Ga0211528_10050739	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → unclassified Pseudomonadales → Pseudomonadales bacterium	1813	Open in IMG/M
3300020420\|Ga0211580_10011621	Not Available	3933	Open in IMG/M
3300020420\|Ga0211580_10022433	All Organisms → Viruses → Predicted Viral	2760	Open in IMG/M
3300020422\|Ga0211702_10060539	All Organisms → cellular organisms → Bacteria	1039	Open in IMG/M
3300020436\|Ga0211708_10047966	All Organisms → Viruses → Predicted Viral	1644	Open in IMG/M
3300020437\|Ga0211539_10000263	Not Available	19678	Open in IMG/M
3300020437\|Ga0211539_10048973	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Marinobacteraceae → Marinobacter → unclassified Marinobacter → Marinobacter sp.	1664	Open in IMG/M
3300020437\|Ga0211539_10315041	Not Available	649	Open in IMG/M
3300020441\|Ga0211695_10226634	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	668	Open in IMG/M
3300020451\|Ga0211473_10001979	Not Available	10292	Open in IMG/M
3300020451\|Ga0211473_10274671	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	866	Open in IMG/M
3300020451\|Ga0211473_10415006	Not Available	688	Open in IMG/M
3300020454\|Ga0211548_10478307	Not Available	610	Open in IMG/M
3300020457\|Ga0211643_10521163	All Organisms → cellular organisms → Bacteria	584	Open in IMG/M
3300020460\|Ga0211486_10023932	All Organisms → cellular organisms → Bacteria	3010	Open in IMG/M
3300020463\|Ga0211676_10114947	All Organisms → Viruses → Predicted Viral	1748	Open in IMG/M
3300020463\|Ga0211676_10197935	All Organisms → Viruses	1218	Open in IMG/M
3300020470\|Ga0211543_10010216	Not Available	5528	Open in IMG/M
3300020470\|Ga0211543_10115343	All Organisms → Viruses → Predicted Viral	1365	Open in IMG/M
3300020470\|Ga0211543_10392667	Not Available	667	Open in IMG/M
3300020470\|Ga0211543_10392750	Not Available	667	Open in IMG/M
3300020472\|Ga0211579_10227297	All Organisms → Viruses → Predicted Viral	1077	Open in IMG/M
3300021792\|Ga0226836_10876392	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Marinobacteraceae → Marinobacter → unclassified Marinobacter → Marinobacter sp.	506	Open in IMG/M
3300022066\|Ga0224902_102296	Not Available	952	Open in IMG/M
3300022074\|Ga0224906_1003862	Not Available	6520	Open in IMG/M
3300022074\|Ga0224906_1072648	Not Available	1055	Open in IMG/M
3300025086\|Ga0208157_1005280	All Organisms → Viruses → Predicted Viral	4697	Open in IMG/M
3300025086\|Ga0208157_1014901	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → unclassified Pseudomonadales → Pseudomonadales bacterium	2473	Open in IMG/M
3300025101\|Ga0208159_1001241	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	9666	Open in IMG/M
3300025101\|Ga0208159_1003510	Not Available	5160	Open in IMG/M
3300025101\|Ga0208159_1036279	All Organisms → Viruses → Predicted Viral	1089	Open in IMG/M
3300025101\|Ga0208159_1056736	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	792	Open in IMG/M
3300025127\|Ga0209348_1000219	Not Available	31479	Open in IMG/M
3300025127\|Ga0209348_1010598	All Organisms → Viruses → Predicted Viral	3702	Open in IMG/M
3300025127\|Ga0209348_1019203	Not Available	2578	Open in IMG/M
3300025127\|Ga0209348_1036665	All Organisms → Viruses → Predicted Viral	1726	Open in IMG/M
3300025127\|Ga0209348_1074241	All Organisms → Viruses → Predicted Viral	1096	Open in IMG/M
3300025127\|Ga0209348_1134411	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	738	Open in IMG/M
3300025127\|Ga0209348_1181651	All Organisms → cellular organisms → Bacteria	599	Open in IMG/M
3300025127\|Ga0209348_1195145	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	568	Open in IMG/M
3300025127\|Ga0209348_1209875	Not Available	538	Open in IMG/M
3300025132\|Ga0209232_1115648	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Siphoviridae → unclassified Siphoviridae → Synechococcus phage S-CBS4	890	Open in IMG/M
3300025132\|Ga0209232_1220950	Not Available	566	Open in IMG/M
3300025132\|Ga0209232_1239807	Not Available	529	Open in IMG/M
3300025151\|Ga0209645_1041911	All Organisms → Viruses → Predicted Viral	1640	Open in IMG/M
3300025151\|Ga0209645_1081994	All Organisms → Viruses → Predicted Viral	1071	Open in IMG/M
3300027774\|Ga0209433_10000031	Not Available	40739	Open in IMG/M
3300027906\|Ga0209404_10031237	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Marinobacteraceae → Marinobacter → unclassified Marinobacter → Marinobacter sp.	2960	Open in IMG/M
3300029309\|Ga0183683_1006402	All Organisms → cellular organisms → Bacteria	3422	Open in IMG/M
3300029309\|Ga0183683_1016824	All Organisms → Viruses → Predicted Viral	1607	Open in IMG/M
3300029319\|Ga0183748_1022567	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2192	Open in IMG/M
3300029319\|Ga0183748_1041739	All Organisms → Viruses → Predicted Viral	1372	Open in IMG/M
3300029319\|Ga0183748_1105979	Not Available	635	Open in IMG/M
3300029792\|Ga0183826_1003345	All Organisms → Viruses → Predicted Viral	2986	Open in IMG/M
3300031785\|Ga0310343_10016205	All Organisms → Viruses → Predicted Viral	4150	Open in IMG/M
3300031785\|Ga0310343_10042733	All Organisms → Viruses → Predicted Viral	2708	Open in IMG/M
3300031785\|Ga0310343_10267971	Not Available	1197	Open in IMG/M
3300031785\|Ga0310343_10344758	All Organisms → Viruses → Predicted Viral	1066	Open in IMG/M
3300031785\|Ga0310343_10866536	Not Available	680	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	100.00%

Habitat	Taxonomy	Distribution
Oceanic	Environmental → Aquatic → Marine → Oceanic	52.63%
Unclassified	Environmental → Aquatic → Marine → Unclassified	38.35%
Strait	Environmental → Aquatic → Marine → Strait	5.26%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	3.01%
Hydrothermal Vents	Environmental → Aquatic → Marine → Hydrothermal Vents	0.75%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	43.61%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	38.35%
Photic Zone	Environmental → Aquatic → Marine → Oceanic → Photic Zone	9.02%
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	5.26%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	3.01%
Diffuse Flow	Environmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow	0.75%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	38.35%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	36.09%
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	5.26%
Seawater	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Seawater	4.51%
Seawater	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater	3.76%
Surface Seawater	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Surface Seawater	3.01%
Marine	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine	3.01%
Marine Water	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine Water	2.26%
Seawater	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater	1.50%
Marine	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Marine	1.50%
Hydrothermal Vent Fluids	Environmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow → Hydrothermal Vent Fluids	0.75%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001957	Marine microbial communities from Wolf Island, Equador - GS035	Environmental	Open in IMG/M
3300001962	Marine microbial communities from Cocos Island, Costa Rica - GS023	Environmental	Open in IMG/M
3300001967	Marine microbial communities from Devil's Crown, Floreana Island, Equador - GS027	Environmental	Open in IMG/M
3300002040	GS000c - Sargasso Station 3	Environmental	Open in IMG/M
3300002176	Marine microbial communities from oxygen minimum zone in mesopelagic equatorial Pacific - METZYME_5_50m	Environmental	Open in IMG/M
3300002482	Marine viral communities from the Pacific Ocean - ETNP_2_30	Environmental	Open in IMG/M
3300002483	Marine viral communities from the Pacific Ocean - ETNP_6_30	Environmental	Open in IMG/M
3300002488	Marine viral communities from the Pacific Ocean - ETNP_2_60	Environmental	Open in IMG/M
3300004951	Marine water microbial communities from the East Sea, Korea with extracellular vesicles - East-Sea-EVs	Environmental	Open in IMG/M
3300005608	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201302PF84A	Environmental	Open in IMG/M
3300006305	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT229_1_0025m	Environmental	Open in IMG/M
3300006345	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT224_1_0075m	Environmental	Open in IMG/M
3300006735	Marine viral communities from the Subarctic Pacific Ocean - 5B_ETSP_OMZ_AT15132_CsCl metaG	Environmental	Open in IMG/M
3300006737	Marine viral communities from the Subarctic Pacific Ocean - 5_ETSP_OMZ_AT15132 metaG	Environmental	Open in IMG/M
3300006749	Marine viral communities from the Subarctic Pacific Ocean - 9_ETSP_OMZ_AT15188 metaG	Environmental	Open in IMG/M
3300009593	Marine eukaryotic phytoplankton communities from Atlantic Ocean - Tropical Atlantic ANT8 Metagenome	Environmental	Open in IMG/M
3300009790	Marine eukaryotic phytoplankton communities from Atlantic Ocean - Tropical Atlantic ANT10 Metagenome	Environmental	Open in IMG/M
3300012919	Marine microbial communities from the Central Pacific Ocean - Fk160115 60m metaG	Environmental	Open in IMG/M
3300012920	Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St8 metaG	Environmental	Open in IMG/M
3300012936	Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St13 metaG	Environmental	Open in IMG/M
3300012952	Marine eukaryotic phytoplankton communities from the Atlantic Ocean - Atlantic ANT 4 Metagenome	Environmental	Open in IMG/M
3300012953	Marine eukaryotic phytoplankton communities from the Atlantic Ocean - Atlantic ANT 2 Metagenome	Environmental	Open in IMG/M
3300017732	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 38 SPOT_SRF_2012-12-11	Environmental	Open in IMG/M
3300017739	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 56 SPOT_SRF_2014-09-10	Environmental	Open in IMG/M
3300017768	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 6 SPOT_SRF_2009-12-23 (version 2)	Environmental	Open in IMG/M
3300017781	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 46 SPOT_SRF_2013-08-14	Environmental	Open in IMG/M
3300020267	Marine microbial communities from Tara Oceans - TARA_B100000927 (ERX556026-ERR599108)	Environmental	Open in IMG/M
3300020269	Marine microbial communities from Tara Oceans - TARA_A100001035 (ERX556080-ERR599041)	Environmental	Open in IMG/M
3300020299	Marine microbial communities from Tara Oceans - TARA_B100000214 (ERX555923-ERR599016)	Environmental	Open in IMG/M
3300020301	Marine microbial communities from Tara Oceans - TARA_B100000925 (ERX556086-ERR598997)	Environmental	Open in IMG/M
3300020306	Marine microbial communities from Tara Oceans - TARA_B100000212 (ERX556014-ERR599098)	Environmental	Open in IMG/M
3300020366	Marine microbial communities from Tara Oceans - TARA_B000000437 (ERX556091-ERR599146)	Environmental	Open in IMG/M
3300020377	Marine microbial communities from Tara Oceans - TARA_B100000927 (ERX556007-ERR599065)	Environmental	Open in IMG/M
3300020380	Marine microbial communities from Tara Oceans - TARA_B000000565 (ERX555945-ERR599058)	Environmental	Open in IMG/M
3300020384	Marine microbial communities from Tara Oceans - TARA_B000000441 (ERX556023-ERR599110)	Environmental	Open in IMG/M
3300020387	Marine microbial communities from Tara Oceans - TARA_B100000405 (ERX556119-ERR599023)	Environmental	Open in IMG/M
3300020394	Marine microbial communities from Tara Oceans - TARA_B000000557 (ERX556068-ERR599026)	Environmental	Open in IMG/M
3300020401	Marine microbial communities from Tara Oceans - TARA_B100000212 (ERX555985-ERR599139)	Environmental	Open in IMG/M
3300020402	Marine microbial communities from Tara Oceans - TARA_B000000609 (ERX555971-ERR599057)	Environmental	Open in IMG/M
3300020403	Marine microbial communities from Tara Oceans - TARA_B100000085 (ERX556015-ERR599145)	Environmental	Open in IMG/M
3300020405	Marine microbial communities from Tara Oceans - TARA_B000000532 (ERX556129-ERR599012)	Environmental	Open in IMG/M
3300020409	Marine microbial communities from Tara Oceans - TARA_A100001403 (ERX555912-ERR599106)	Environmental	Open in IMG/M
3300020410	Marine microbial communities from Tara Oceans - TARA_B100000519 (ERX555959-ERR599148)	Environmental	Open in IMG/M
3300020411	Marine microbial communities from Tara Oceans - TARA_B100000131 (ERX556098-ERR599130)	Environmental	Open in IMG/M
3300020417	Marine microbial communities from Tara Oceans - TARA_B100000073 (ERX556034-ERR599082)	Environmental	Open in IMG/M
3300020420	Marine microbial communities from Tara Oceans - TARA_B100001248 (ERX556094-ERR599142)	Environmental	Open in IMG/M
3300020422	Marine prokaryotic communities collected during Tara Oceans survey from station TARA_076 - TARA_B100000513 (ERX555999-ERR599126)	Environmental	Open in IMG/M
3300020436	Marine microbial communities from Tara Oceans - TARA_B100000424 (ERX556009-ERR598984)	Environmental	Open in IMG/M
3300020437	Marine microbial communities from Tara Oceans - TARA_B100000282 (ERX555906-ERR599074)	Environmental	Open in IMG/M
3300020441	Marine prokaryotic communities collected during Tara Oceans survey from station TARA_078 - TARA_B100000524 (ERX556088-ERR599006)	Environmental	Open in IMG/M
3300020451	Marine microbial communities from Tara Oceans - TARA_B100001778 (ERX555927-ERR598996)	Environmental	Open in IMG/M
3300020454	Marine microbial communities from Tara Oceans - TARA_B100001769 (ERX556037-ERR599170)	Environmental	Open in IMG/M
3300020457	Marine microbial communities from Tara Oceans - TARA_B100001113 (ERX555941-ERR599014)	Environmental	Open in IMG/M
3300020460	Marine microbial communities from Tara Oceans - TARA_A100001037 (ERX555931-ERR599097)	Environmental	Open in IMG/M
3300020463	Marine microbial communities from Tara Oceans - TARA_B100001057 (ERX555988-ERR599050)	Environmental	Open in IMG/M
3300020470	Marine microbial communities from Tara Oceans - TARA_B100000287 (ERX555976-ERR599053)	Environmental	Open in IMG/M
3300020472	Marine microbial communities from Tara Oceans - TARA_B100001250 (ERX556017-ERR598995)	Environmental	Open in IMG/M
3300021792	Hydrothermal fluids microbial communities from Mariana Back-Arc Basin vent fields, Pacific Ocean - Illium_FS922 150_kmer	Environmental	Open in IMG/M
3300022066	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 37 SPOT_SRF_2012-11-28 (v2)	Environmental	Open in IMG/M
3300022074	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 56 SPOT_SRF_2014-09-10 (v2)	Environmental	Open in IMG/M
3300025086	Marine viral communities from the Subarctic Pacific Ocean - 5_ETSP_OMZ_AT15132 metaG (SPAdes)	Environmental	Open in IMG/M
3300025101	Marine viral communities from the Subarctic Pacific Ocean - 9_ETSP_OMZ_AT15188 metaG (SPAdes)	Environmental	Open in IMG/M
3300025127	Marine viral communities from the Pacific Ocean - ETNP_2_30 (SPAdes)	Environmental	Open in IMG/M
3300025132	Marine viral communities from the Pacific Ocean - ETNP_2_60 (SPAdes)	Environmental	Open in IMG/M
3300025151	Marine viral communities from the Pacific Ocean - ETNP_6_30 (SPAdes)	Environmental	Open in IMG/M
3300027774	Marine microbial communities from oxygen minimum zone in mesopelagic equatorial Pacific - METZYME_5_50m (SPAdes)	Environmental	Open in IMG/M
3300027906	Marine eukaryotic phytoplankton communities from Atlantic Ocean - Tropical Atlantic ANT8 Metagenome (SPAdes)	Environmental	Open in IMG/M
3300029309	Marine viral communities collected during Tara Oceans survey from station TARA_100 - TARA_R100001440	Environmental	Open in IMG/M
3300029319	Marine viral communities collected during Tara Oceans survey from station TARA_032 - TARA_A100001516	Environmental	Open in IMG/M
3300029792	Marine giant viral communities collected during Tara Oceans survey from station TARA_041 - TARA_Y100000052	Environmental	Open in IMG/M
3300031785	Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - HC15-DNA-20-25_MG	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GOS2250_10010212	3300001957	Marine	MNDIQKLERLAFLADLPYSDHTSEDWDEELRLECELQDHPLYKSYLDQ*
GOS2239_10006853	3300001962	Marine	MTDTQKLERLAFLANLPYCKHTSEDWEEELRLECELQDHPQYKSYLNP*
GOS2242_10286275	3300001967	Marine	MTDTQKLRRLDYLSSLPYRDHTPEMWDEELALECELQNHPLYKSYLDQ*
GOScombined01_1001574294	3300002040	Marine	MTDTQKLERLAFLANLPYCNHTSDDWDEELRLECELQDHPQYKSYLDQ*
GOScombined01_1012953492	3300002040	Marine	MTDTQKLERLAYLANLPYCKHTSEDWEEELRLECELQDHPQYISFLNP*
JGI24820J26691_100007810	3300002176	Marine	MTDTQKLERLAFLANLPYCKHTSEDWAEELALECELQDHPNYKSYLDQ*
JGI25127J35165_10047359	3300002482	Marine	MTDTQKLERLAFLADLPYCKHTSEDWEEELRLECELQDHPQYISFLNQ*
JGI25127J35165_10185946	3300002482	Marine	MNDQQKLERLDFLSSLPYSRHTSEDWDEELALECQLQDHPNYKSFLDQ*
JGI25127J35165_10446654	3300002482	Marine	MTDTQKLKRLDYLSSLPYSDHTPEMWDEELALECELQNHPQYKSFLDQ*
JGI25127J35165_10915241	3300002482	Marine	MTDTQKLERLAFLANLPYTSHTSEDWEEELRLECELQDHPQYISFLNP*
JGI25127J35165_11189562	3300002482	Marine	MTDTQKLERLAYLASLPYCKHTPEDWDEELALECQLQDHPNYKSFLNP*
JGI25132J35274_10240304	3300002483	Marine	MTDTQKLERLAFLADLPYCKHTSEDWEEELRLECELQDHPNYKSYLDQ*
JGI25128J35275_10355182	3300002488	Marine	MTDIQKLKRLDYLSSLPYSAHTPEMWDEELALECQLQDHPQFKSYLDQ*
JGI25128J35275_10875442	3300002488	Marine	MTDTQKLERLAYLADLPYCKHTSEDWEEELKLECELQDHPQYITFLNQ*
Ga0068513_10100542	3300004951	Marine Water	MTDTQKLERLAYLANLPYEKHTSEDWDEELALECQLQDHPQYISFLNP*
Ga0068513_10208982	3300004951	Marine Water	MNDLQKLERLAFLANLPYTSHTSEDWEEELRLECELQDHPQYISFLNP*
Ga0068513_10240681	3300004951	Marine Water	MTDIQKLNRLAFLVNLPYNSHTPEDWDEQLALECELQDHPKYISFLNQ*
Ga0066840_100353711	3300005608	Marine	MTDTQKLERLAYLADLPYCKHTSEDWEEELRLECELQDHPQYISFLNR*
Ga0066840_100396952	3300005608	Marine	MTDIQKLQRLAYLASLPYCKHTSEDWDEELRLECELQDHPQYISFLNR*
Ga0066840_100436952	3300005608	Marine	MTDTQKLERLAFLANLPYCKHTSEDWDEELRLECELQDHPQYISFLNP*
Ga0068468_10058745	3300006305	Marine	MTDIQKLERLAYLANLPYCKHTSEHWEEELKLECELQDHPQYISFLNR*
Ga0099693_10248644	3300006345	Marine	MTDIQKLERLDYLSSLPYCKHTSEDWEEELKLECELQDHPQYISFLNP*
Ga0098038_101240610	3300006735	Marine	MNDIQKLERLDFLSSLSYSDHTSEDWDEELRLECELQNHPLYKSYLDQ*
Ga0098038_10303394	3300006735	Marine	MTDTQKLERLDFLSSLSYSDHTSEDWDEELRLECELQDHPLYKSYLDQ*
Ga0098037_10826542	3300006737	Marine	MPDTQKLQRLDYLSSLPYLDYTPEMWDEELALECQLQDHPQFKSYLDQ*
Ga0098037_11415322	3300006737	Marine	MGGLMTDTQKLERLDFLSSLSYSAHTPEMWDEELALECELQNHPLYKSYLDQ*PHTKYEL
Ga0098037_12188973	3300006737	Marine	MTDTQKLERLAFLANLPYCKHTSEDWDKELRLECELQDHPQYKSFLDQ*
Ga0098042_100113818	3300006749	Marine	MTNTQKLKRLDYLSSLPYRDHTSEMWDEELALECELQNHPLYKSYPDQ*
Ga0098042_10029327	3300006749	Marine	MTDTQKLERLAFLANLPYCDHTSDDWDEELRLECELQDHPQYIYFLNQ*
Ga0098042_10134702	3300006749	Marine	MTDTQKLERLAFLANLPYCKHTSEDWDEELRLECELQDHPQYKSFLDQ*
Ga0098042_10521642	3300006749	Marine	MTDTQKLERLDFLSSLSYSAHTTEDWEEELRLECELQDHPLYKSYLDQ*
Ga0098042_10868053	3300006749	Marine	MNDIQKLERLDFLSSLSYSAHTTEDWEEELRLECELQDHPLYKSYLDQ*
Ga0115011_100241076	3300009593	Marine	MTDTQKLERLAYLADLPFNAHTSEDWDEELRLECELQDHPQFKSFLDQ*
Ga0115011_109511282	3300009593	Marine	MTDTQKLQRLDFLSSLSYSDHTPEDWDEELALESELQDHPQFKSFLDQ*
Ga0115012_109624122	3300009790	Marine	MTDIQKLERLDFLSSLSYSDHTPEDWDEELALESELQDHPQFKSFLDQ*
Ga0160422_100233634	3300012919	Seawater	MTDTQKLERLAFLANLPYCKHTSEDWEEELRLECELQDHPQYISFLNQ*
Ga0160422_100459615	3300012919	Seawater	MTDTQKLERLDYLSSLPYRDHTPEMWDEELALECELQNHPLYKSYPDQ*
Ga0160422_101182881	3300012919	Seawater	MTDTQKLERLAFLANLPYCDHTSEDWDEELRLECELQDHPQYISFLNR*
Ga0160422_102545743	3300012919	Seawater	MNDIQKLERLDFLSSLSYSAHTPEMWDEELALECELQNHPLYKSYPDQ*
Ga0160422_107156122	3300012919	Seawater	MTDTQKLERLDYLSSLPYRDHTPEMWDEELALECELQNHPLYK
Ga0160422_110727853	3300012919	Seawater	KLERLDFLSSLSYSAHTPEMWDEELALECELQNHPLYKSYPDQ*
Ga0160423_103667844	3300012920	Surface Seawater	LAYLANLPYCDHTSDDWDEELRLECELQDHPQYISFLNP*
Ga0160423_105301102	3300012920	Surface Seawater	MGGLMTDTQKLERLAFLADLPYCKHTSEDWDEELRLECELQNHPLYKSFTDQ*
Ga0163109_105862263	3300012936	Surface Seawater	MTDAQKLKRLDYLSSLPYSDHTPEMWDEELALECELQNHPQYKSFLDQ*
Ga0163109_106942143	3300012936	Surface Seawater	MTDTQKLERLAFLANLPYCDHTSDDWDEELRLECELQDHPQYKSFLDQ*
Ga0163180_101639581	3300012952	Seawater	RLDFLSSLSYSDHTPEMWNEELALECQLQDHPKYKSYLDQ*
Ga0163179_111840863	3300012953	Seawater	MTDTQKLERLAYLADLPYCKHTSEDWDEELRLECELQDHPQYISFLNP*
Ga0181415_10048056	3300017732	Seawater	MPDTQKLQRLAFLANLPYCDHTSDDWDEELKLECELQDHPKYISFLNP
Ga0181433_10709541	3300017739	Seawater	MQMTDTQKLQRLAFLANLPYSKHTPEMWDEELALECDLQNHPQYISFLNP
Ga0187220_11901552	3300017768	Seawater	MNDIQKLERLDFLSSLSYSDHTSEDWDEELRLECELQDHPLYKSYLDQ
Ga0181423_10699711	3300017781	Seawater	DTQKLKRLAFLANLPYSKHTPEMWDEELALECHLQDHPQYISFLNP
Ga0211648_10005817	3300020267	Marine	MTDTQKLKRLAFLANLSYSDHTSEDWEEELRLECELQDHPQYKSYLDQ
Ga0211484_10100012	3300020269	Marine	MTDTQKLERLAFLASLPYCKHTSEDWEEELRLECELQDHPQYISFLNQ
Ga0211615_100017515	3300020299	Marine	MTDTQKLERLAYLADLPYCKHTSEDWEEELRLECELQDHPQYISFLNP
Ga0211650_10113004	3300020301	Marine	ISRICGGCMTDTQKLKRLAFLANLSYSDHTSEDWEEELRLECELQDHPQYKSYLDQ
Ga0211616_10118183	3300020306	Marine	MQMTDTQKLERLDFLSSLSYSAHTPEMWDEELALECELQNHPLYKSYLDQ
Ga0211489_101240411	3300020366	Marine	MTDTQKLERLAYLASLSYFDHTPEMWEEELLLECELQDHPQ
Ga0211647_101813321	3300020377	Marine	MTDTQKLERLDFLSSLSYSAHTPEMWDEELALECELQNHPLYKSYPDQ
Ga0211498_100063819	3300020380	Marine	MTDTQKLERLAYLASLSYFDHTPEMWEEELLLECELQDHPQYKSFLNQ
Ga0211498_101472342	3300020380	Marine	MNDTQKLQRLAFLANLPYCKHTSEDWEEELRLECELQDHPQYISFLNP
Ga0211596_101039091	3300020384	Marine	IQKLKRLAFLANLPYSKHTPEMWDEELALECHLQDHPQYISFLNR
Ga0211590_102489142	3300020387	Marine	MTDIQKLERLAYLANLPYTSHTSEDWEEELRLECELQDHPQYISFLNP
Ga0211497_101489612	3300020394	Marine	MTDAQKLERLDYLSSLSYSAHTPEMWDEELALECDLQDHPNYKSFLDQ
Ga0211617_100059289	3300020401	Marine	MTDTQKLERLDYLSSLPYRDHTSEMWDEELALECELQNHPLYKSYPDQ
Ga0211617_100185965	3300020401	Marine	MTDTQKLERLDFLSSLSYSAHTPEMWDEELALECELQNHPLYKSYLDQ
Ga0211617_104159642	3300020401	Marine	MTDIQKLERLDFLSSLSYRDHTPEMWDEELALECELQNHPLYKSYLDQ
Ga0211499_101683984	3300020402	Marine	SRVPRVCGGCMTDTQKLERLAFLADLPYCKHTSEDWEEELRLECELQDHPQYISFLNR
Ga0211499_101970212	3300020402	Marine	MNDTQKLQRLAFLANLPYCKHTSEDWEEELRLECELQDHPQYISFL
Ga0211532_102689362	3300020403	Marine	MTDIQKLERLAFLADLSYSAHTPEMWDEELALECELQDHPNYKSFLDQ
Ga0211496_100155332	3300020405	Marine	MTDIQKLERLAYLANLPYTSHTSEDWEEELRLECELQDHPQYISFLNR
Ga0211472_100431464	3300020409	Marine	MTDTQKLERLAFLADLPYCKHTSEDWEEELRLECELQDHPQYISFLNP
Ga0211472_104240492	3300020409	Marine	MNDTQKLERLAYLASLSYFDHTPEMWEEELLLECELQDHPQYISFLNP
Ga0211699_101771421	3300020410	Marine	MKDTQKLKRLAYLANLPYCDHTSEDWDEELKLECDLQDHPKYISFL
Ga0211587_104624622	3300020411	Marine	MNDTQKLERLAELANLPFNAHTSEDWDEELRLECELQDHPKFKSFLDQ
Ga0211528_100507393	3300020417	Marine	MTDTQKLERLAFLADLPYCKHTSEDWEEELRLECELQDHPQYISFLNR
Ga0211580_100116216	3300020420	Marine	MTDIQKLQRLDFLSSLPYSAHTPEMWDEELALECQLEDHPDYKGHQNKC
Ga0211580_100224336	3300020420	Marine	RLAFLANLPYCKHTSEDWEEELRLECELQDHPQYISFLNP
Ga0211702_100605393	3300020422	Marine	MKDTQKLKRLAYLANLPYCDHTSEDWDEELKLECDLQDHPKYISFLNP
Ga0211708_100479662	3300020436	Marine	MTDTQKLERLAYLADLPYSKHTPEMWDEELALECHLQDHPNYKSYLDQ
Ga0211539_1000026329	3300020437	Marine	MTDTQKLERLAFLADLPYCKHTSEDWDEQLRLECELEDHPQYISFLNQ
Ga0211539_100489736	3300020437	Marine	MTDTQKLERLAFLANLPYCKHTSEDWEEELRLECELQDHPQYISF
Ga0211539_103150413	3300020437	Marine	KLERLAFLADLPYCKHTSEDWEEELRLECELQDHPQYISFLNR
Ga0211695_102266341	3300020441	Marine	MTDTQKLKRLAFLANLPYSKHTPEMWDEELALECDLQDHPKYISFLN
Ga0211473_100019794	3300020451	Marine	MNDTQKLERLAFLANLPYCKHTSEDWEEELKLECELQDHPQYISFLNP
Ga0211473_102746714	3300020451	Marine	MTDHQKLERLAFLANLPYCKHTSEDWEEELRLECELEDHPQYISFLNR
Ga0211473_104150062	3300020451	Marine	MKDTQKLKRLAFLANLPYSKHTPEMWDEELALECDLQDHPQYKSFLDQ
Ga0211548_104783073	3300020454	Marine	LLGARQNKQRRYLGGLMKDTQKLKRLAFLANLPYSKHTPEMWDEELALECDLQDHPQYKSFLDQ
Ga0211643_105211631	3300020457	Marine	MTDIQKLERLDFLSSLSYSAHTPEMWDEELALECELQNHPLYKSYPDQ
Ga0211486_100239326	3300020460	Marine	MNDTQKLERLAYLASLPYCKHTSEDWEEELRLECELQDHPQYISFLNQ
Ga0211676_101149475	3300020463	Marine	MNDLQKLQRLDYLSSLPYLDHTSEDWDEELALECQLQDHPQFKSYLDQ
Ga0211676_101979354	3300020463	Marine	MTDIQKLKRLAYLASLPYSAHTPEMWDEELALECQLQDHPQFKSYLDQ
Ga0211543_100102165	3300020470	Marine	MTDTQKLERLAFLANLPYCKHTSEDWEEELRLECELQDHPQYISFLNR
Ga0211543_101153433	3300020470	Marine	MTDQQKLERLAFLADLPYCKHTSEDWEEELRLECELQDHPQYISFLNR
Ga0211543_103926671	3300020470	Marine	LERLAFLANLPYCDHTSEDWEEELRLECELQDHPQYISFLNR
Ga0211543_103927501	3300020470	Marine	LERLAFLANLPYCDHTSEDWEEELRLECELQDHPQYISFLNQ
Ga0211579_102272974	3300020472	Marine	TEDSMNDIQKLQRLAFLANLPYSKHTPEMWDEELRLECETQDHPLAKSYLDK
Ga0226836_108763922	3300021792	Hydrothermal Vent Fluids	MTDTQKLERLAFLANLPYCKHTSEDWEEELRLECELQDHPQYISFLNP
Ga0224902_1022962	3300022066	Seawater	MTDTQKLQRLAFLANLPYCDHTSDDWDEELKLECELQDHPKYISFLNP
Ga0224906_100386214	3300022074	Seawater	MTNTQKLQRLDYLSSLPYLDHTPEMWDEELALECQLQDHPQFKSYLDQ
Ga0224906_10726485	3300022074	Seawater	ANLPYSKHTPEMWDEELALECDLQNHPQYISFLNP
Ga0208157_10052808	3300025086	Marine	MNDIQKLERLDFLSSLSYSDHTSEDWDEELRLECELQNHPLYKSYLDQ
Ga0208157_10149017	3300025086	Marine	MTDTQKLERLDFLSSLSYSDHTSEDWDEELRLECELQDHPLYKSYLDQ
Ga0208159_10012417	3300025101	Marine	MTNTQKLKRLDYLSSLPYRDHTSEMWDEELALECELQNHPLYKSYPDQ
Ga0208159_10035107	3300025101	Marine	MTDTQKLERLAFLANLPYCDHTSDDWDEELRLECELQDHPQYIYFLNQ
Ga0208159_10362793	3300025101	Marine	MTDTQKLERLAFLANLPYCKHTSEDWDEELRLECELQDHPQYKSFLDQ
Ga0208159_10567361	3300025101	Marine	MTDTQKLERLDFLSSLSYSAHTTEDWEEELRLECELQDHPLYKSYLD
Ga0209348_100021934	3300025127	Marine	MTDTQKLERLAFLANLPYCDHTSDDWDEELRLECELQDH
Ga0209348_10105987	3300025127	Marine	MTDTQKLKRLDYLSSLPYSDHTPEMWDEELALECELQNHPQYKSFLDQ
Ga0209348_10192034	3300025127	Marine	MNDQQKLERLDFLSSLPYSRHTSEDWDEELALECQLQDHPNYKSFLDQ
Ga0209348_10366652	3300025127	Marine	MTDTQKLERLAFLANLPYTSHTSEDWEEELRLECELQDHPQYISFLNP
Ga0209348_10742413	3300025127	Marine	MTDTQKLERLAFLANLPYCKHTSEDWDEELRLECELQDHPQYISFLNP
Ga0209348_11344111	3300025127	Marine	LERLAFLANLPYCDHTSDDWDEELRLECELQDHPQYKSFLDQ
Ga0209348_11816511	3300025127	Marine	MNDTQKLERLAYLADLPYCKHTSEDWEEELRLECELQDHPQYISFLNP
Ga0209348_11951451	3300025127	Marine	FLANLPYCKHTSEDWEEELRLECELQDHPQYISFLNP
Ga0209348_12098753	3300025127	Marine	VLMTDTQKLERLAFLANLPYCDHTSDDWDEELALECQLQDHPQYISFLNP
Ga0209232_11156483	3300025132	Marine	MTDTQKLERLAYLADLPYCKHTSEDWEEELKLECELQDHPQYITFLNQ
Ga0209232_12209502	3300025132	Marine	MTDTQKLERLAYLANLPYCKHTSEDWEEELRLECELQDHPQYISFLNP
Ga0209232_12398072	3300025132	Marine	MTDTQKLERLAYLASLPYCKHTPEDWDEELALECQLQDHPNYKSFLNP
Ga0209645_10419114	3300025151	Marine	MTDTQKLERLAFLADLPYCKHTSEDWEEELRLECELQDHPNYKSYLDQ
Ga0209645_10819944	3300025151	Marine	MNDTQKLERLAFLANLPYCKHTSEDWEEELRLECELQDHPNYKSY
Ga0209433_1000003123	3300027774	Marine	MTDTQKLERLAFLANLPYCKHTSEDWAEELALECELQDHPNYKSYLDQ
Ga0209404_100312375	3300027906	Marine	MTDTQKLERLAYLADLPFNAHTSEDWDEELRLECELQDHPQFKSFLDQ
Ga0183683_10064028	3300029309	Marine	MTINQKLKRLDYLSSLPYRDHTPKMWDEELALECELQNHPLYKSYPDQ
Ga0183683_10168242	3300029309	Marine	MTDTQKLERLDYLSSLPYRDHTPEMWDEELALECELQNHPLYKSYPDQ
Ga0183748_10225676	3300029319	Marine	MNDTQKLQRLAYLADLPYCKHTSEDWEEELRLECELQDHPQYISFLNP
Ga0183748_10417394	3300029319	Marine	TDTQKLERLAFLANLPYCKHTSEDWDEELRLECELQDHPQYISFLNP
Ga0183748_11059792	3300029319	Marine	MTDTQKLERLAFLADLPYCDHTSEDWDEELRLECELQDHPQFKSFLDQ
Ga0183826_10033457	3300029792	Marine	DTQKLERLAYLASLSYFDHTPEMWEEELLLECELQDHPQYISFLNR
Ga0310343_100162059	3300031785	Seawater	MTDEQKLERLAFLADLPYCKHTSEHWEEELRLECELQDHPQYISFLNR
Ga0310343_100427334	3300031785	Seawater	MTIDQKLRRLDFLSSLPYLQHTSEDWDEELRLECELQDHPKYKSFLDQ
Ga0310343_102679713	3300031785	Seawater	MTDTQKLERLAYLANLPYTSHTSDDWAEELALECELQDHPQYISFLNR
Ga0310343_103447584	3300031785	Seawater	MTDTQKLERLAELANLPFNAHTSEDWEEELRLECELQDHPQYKSFLDQ
Ga0310343_108665361	3300031785	Seawater	ERLAFLADLPYCKHTSEDWEEELRLECELQDYPQYISFLNP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F060050

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences