Metagenome / Metatranscriptome Family F059938

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F059938
Family Type	Metagenome / Metatranscriptome
Number of Sequences	133
Average Sequence Length	71 residues
Representative Sequence	MPASSDLAELSTVRSQLEELARRVEAVADRYEDTADSQIASDLYAAERTLISARRAVDKAIAALDDLARS
Number of Associated Samples	110
Number of Associated Scaffolds	133

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	68.42 %
% of genes near scaffold ends (potentially truncated)	32.33 %
% of genes from short scaffolds (< 2000 bps)	83.46 %
Associated GOLD sequencing projects	105
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (53.383 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (21.053 % of family members)
Environment Ontology (ENVO)	Unclassified (26.316 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (51.880 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 84.29% β-sheet: 0.00% Coil/Unstructured: 15.71%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 133 Family Scaffolds
PF00815	Histidinol_dh	45.86
PF13530	SCP2_2	13.53
PF13185	GAF_2	4.51
PF01590	GAF	3.01
PF00155	Aminotran_1_2	2.26
PF08530	PepX_C	1.50
PF13622	4HBT_3	0.75
PF13620	CarboxypepD_reg	0.75
PF00475	IGPD	0.75
PF07228	SpoIIE	0.75

COG ID	Name	Functional Category	% Frequency in 133 Family Scaffolds
COG0141	Histidinol dehydrogenase	Amino acid transport and metabolism [E]	45.86
COG2936	Predicted acyl esterase	General function prediction only [R]	1.50
COG0131	Imidazoleglycerol phosphate dehydratase HisB	Amino acid transport and metabolism [E]	0.75

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.38 %
All Organisms	root	All Organisms	46.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.38 %
cellular organisms	root	All Organisms → cellular organisms	46.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.38 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	45.86 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.38 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	37.59 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.75 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	0.75 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.38 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	35.34 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.75 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.75 %
Stenosarchaea group	clade	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.38 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	21.80 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	0.75 %
Acidimicrobiia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	0.75 %
Halobacteria	class	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria	0.75 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.38 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	14.29 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.26 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	1.50 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.75 %
Haloferacales	order	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Haloferacales	0.75 %
Acidimicrobiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales	0.75 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.38 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	13.53 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.26 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	1.50 %
Haloferacaceae	family	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Haloferacales → Haloferacaceae	0.75 %
Actinobacteria bacterium IMCC26256	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinobacteria bacterium IMCC26256	0.75 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.75 %
Acidimicrobiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales	0.75 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.38 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	13.53 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.26 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	1.50 %
Haloplanus	genus	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Haloferacales → Haloferacaceae → Haloplanus	0.75 %
Actinobacteria bacterium IMCC26256	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinobacteria bacterium IMCC26256	0.75 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.75 %
Acidimicrobiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales	0.75 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.38 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	13.53 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.26 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	1.50 %
Haloplanus natans	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Haloferacales → Haloferacaceae → Haloplanus → Haloplanus natans	0.75 %
Actinobacteria bacterium IMCC26256	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinobacteria bacterium IMCC26256	0.75 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.75 %
Acidimicrobiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales	0.75 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.75 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000956\|JGI10216J12902_100883167	All Organisms → cellular organisms → Bacteria	882	Open in IMG/M
3300000956\|JGI10216J12902_102367595	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1595	Open in IMG/M
3300001661\|JGI12053J15887_10143666	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	1258	Open in IMG/M
3300001661\|JGI12053J15887_10177810	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1097	Open in IMG/M
3300005168\|Ga0066809_10041036	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1011	Open in IMG/M
3300005174\|Ga0066680_10528870	Not Available	741	Open in IMG/M
3300005175\|Ga0066673_10806454	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Haloferacales → Haloferacaceae → Haloplanus → Haloplanus natans	537	Open in IMG/M
3300005186\|Ga0066676_10692390	Not Available	694	Open in IMG/M
3300005332\|Ga0066388_100002933	All Organisms → cellular organisms → Bacteria	10749	Open in IMG/M
3300005332\|Ga0066388_101989713	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1041	Open in IMG/M
3300005332\|Ga0066388_107389694	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	552	Open in IMG/M
3300005444\|Ga0070694_101658543	Not Available	543	Open in IMG/M
3300005444\|Ga0070694_101716799	Not Available	534	Open in IMG/M
3300005445\|Ga0070708_101837411	Not Available	562	Open in IMG/M
3300005447\|Ga0066689_10323067	Not Available	960	Open in IMG/M
3300005454\|Ga0066687_10400315	Not Available	794	Open in IMG/M
3300005467\|Ga0070706_101574290	Not Available	600	Open in IMG/M
3300005468\|Ga0070707_100614339	Not Available	1050	Open in IMG/M
3300005554\|Ga0066661_10071978	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2020	Open in IMG/M
3300005556\|Ga0066707_10491883	Not Available	796	Open in IMG/M
3300005558\|Ga0066698_10951894	All Organisms → cellular organisms → Bacteria	547	Open in IMG/M
3300005559\|Ga0066700_10809956	Not Available	630	Open in IMG/M
3300005569\|Ga0066705_10412562	All Organisms → cellular organisms → Bacteria	846	Open in IMG/M
3300005586\|Ga0066691_10729201	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	586	Open in IMG/M
3300005587\|Ga0066654_10904883	Not Available	507	Open in IMG/M
3300005713\|Ga0066905_100566067	Not Available	956	Open in IMG/M
3300005713\|Ga0066905_100731792	All Organisms → cellular organisms → Bacteria	852	Open in IMG/M
3300005764\|Ga0066903_100004518	All Organisms → cellular organisms → Bacteria	11785	Open in IMG/M
3300005764\|Ga0066903_101828225	Not Available	1161	Open in IMG/M
3300005937\|Ga0081455_10306713	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1136	Open in IMG/M
3300005937\|Ga0081455_10389765	Not Available	970	Open in IMG/M
3300006034\|Ga0066656_10426064	Not Available	861	Open in IMG/M
3300006048\|Ga0075363_100006627	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5276	Open in IMG/M
3300006048\|Ga0075363_100251256	All Organisms → cellular organisms → Bacteria	1018	Open in IMG/M
3300006573\|Ga0074055_11144178	Not Available	614	Open in IMG/M
3300006800\|Ga0066660_10575114	Not Available	944	Open in IMG/M
3300006844\|Ga0075428_101236605	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	786	Open in IMG/M
3300006845\|Ga0075421_100105021	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales	3553	Open in IMG/M
3300006845\|Ga0075421_100232056	All Organisms → cellular organisms → Bacteria	2269	Open in IMG/M
3300006845\|Ga0075421_101090884	Not Available	897	Open in IMG/M
3300006846\|Ga0075430_100101917	Not Available	2396	Open in IMG/M
3300006846\|Ga0075430_101550683	Not Available	544	Open in IMG/M
3300006847\|Ga0075431_100291278	All Organisms → cellular organisms → Bacteria	1651	Open in IMG/M
3300006853\|Ga0075420_100025034	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5345	Open in IMG/M
3300006853\|Ga0075420_100172166	Not Available	1895	Open in IMG/M
3300006854\|Ga0075425_102800114	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	537	Open in IMG/M
3300006880\|Ga0075429_100327544	Not Available	1340	Open in IMG/M
3300006894\|Ga0079215_11388679	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	548	Open in IMG/M
3300009012\|Ga0066710_103505732	Not Available	593	Open in IMG/M
3300009089\|Ga0099828_10248991	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1593	Open in IMG/M
3300009090\|Ga0099827_11980641	Not Available	506	Open in IMG/M
3300009100\|Ga0075418_10120902	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2783	Open in IMG/M
3300009137\|Ga0066709_101827009	Not Available	851	Open in IMG/M
3300009137\|Ga0066709_102659442	Not Available	668	Open in IMG/M
3300009147\|Ga0114129_12415960	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	629	Open in IMG/M
3300009840\|Ga0126313_11193712	Not Available	627	Open in IMG/M
3300010036\|Ga0126305_10654150	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	709	Open in IMG/M
3300010037\|Ga0126304_11016540	Not Available	565	Open in IMG/M
3300010038\|Ga0126315_10019261	Not Available	3398	Open in IMG/M
3300010039\|Ga0126309_10023915	Not Available	2707	Open in IMG/M
3300010045\|Ga0126311_11929444	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	502	Open in IMG/M
3300010047\|Ga0126382_10334047	Not Available	1153	Open in IMG/M
3300010166\|Ga0126306_10008657	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	6345	Open in IMG/M
3300010325\|Ga0134064_10062990	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1158	Open in IMG/M
3300010362\|Ga0126377_10249494	Not Available	1727	Open in IMG/M
3300010366\|Ga0126379_13687435	Not Available	513	Open in IMG/M
3300012198\|Ga0137364_10063677	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2500	Open in IMG/M
3300012201\|Ga0137365_10047211	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3269	Open in IMG/M
3300012203\|Ga0137399_10680484	Not Available	866	Open in IMG/M
3300012204\|Ga0137374_10034551	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5457	Open in IMG/M
3300012204\|Ga0137374_10080526	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3156	Open in IMG/M
3300012206\|Ga0137380_10734141	Not Available	856	Open in IMG/M
3300012207\|Ga0137381_10556692	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1000	Open in IMG/M
3300012209\|Ga0137379_10755128	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	878	Open in IMG/M
3300012210\|Ga0137378_10392656	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1288	Open in IMG/M
3300012210\|Ga0137378_10498629	Not Available	1124	Open in IMG/M
3300012211\|Ga0137377_10969776	All Organisms → cellular organisms → Bacteria → Terrabacteria group	781	Open in IMG/M
3300012350\|Ga0137372_10460702	Not Available	952	Open in IMG/M
3300012351\|Ga0137386_11291987	Not Available	506	Open in IMG/M
3300012353\|Ga0137367_10363661	Not Available	1029	Open in IMG/M
3300012354\|Ga0137366_10628535	Not Available	769	Open in IMG/M
3300012356\|Ga0137371_10829638	Not Available	704	Open in IMG/M
3300012357\|Ga0137384_10312863	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1304	Open in IMG/M
3300012358\|Ga0137368_10564127	Not Available	726	Open in IMG/M
3300012358\|Ga0137368_10787485	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	590	Open in IMG/M
3300012359\|Ga0137385_10790419	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	789	Open in IMG/M
3300012360\|Ga0137375_10285649	Not Available	1501	Open in IMG/M
3300012924\|Ga0137413_11376599	Not Available	569	Open in IMG/M
3300012958\|Ga0164299_10836270	Not Available	661	Open in IMG/M
3300012960\|Ga0164301_11019635	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	652	Open in IMG/M
3300012971\|Ga0126369_10012132	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	6680	Open in IMG/M
3300012975\|Ga0134110_10088339	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1245	Open in IMG/M
3300012976\|Ga0134076_10445903	Not Available	583	Open in IMG/M
3300014166\|Ga0134079_10307800	Not Available	706	Open in IMG/M
3300015242\|Ga0137412_10565965	Not Available	864	Open in IMG/M
3300017657\|Ga0134074_1413178	Not Available	501	Open in IMG/M
3300018061\|Ga0184619_10164432	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1015	Open in IMG/M
3300018078\|Ga0184612_10146658	Not Available	1234	Open in IMG/M
3300018431\|Ga0066655_10825557	Not Available	631	Open in IMG/M
3300018432\|Ga0190275_10594815	Not Available	1153	Open in IMG/M
3300018433\|Ga0066667_10374290	Not Available	1142	Open in IMG/M
3300018468\|Ga0066662_10607159	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1025	Open in IMG/M
3300021073\|Ga0210378_10306910	Not Available	596	Open in IMG/M
3300022756\|Ga0222622_11343986	Not Available	526	Open in IMG/M
3300025910\|Ga0207684_10121409	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2240	Open in IMG/M
3300025910\|Ga0207684_10705100	Not Available	857	Open in IMG/M
3300026295\|Ga0209234_1029147	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2094	Open in IMG/M
3300026295\|Ga0209234_1197513	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	686	Open in IMG/M
3300026308\|Ga0209265_1153869	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	593	Open in IMG/M
3300026547\|Ga0209156_10110825	Not Available	1355	Open in IMG/M
3300026557\|Ga0179587_10780692	Not Available	630	Open in IMG/M
3300027663\|Ga0208990_1157149	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	598	Open in IMG/M
3300027681\|Ga0208991_1036039	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1499	Open in IMG/M
3300027873\|Ga0209814_10006900	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinobacteria bacterium IMCC26256	4388	Open in IMG/M
3300027882\|Ga0209590_11048690	Not Available	506	Open in IMG/M
3300027902\|Ga0209048_10000251	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	58674	Open in IMG/M
3300027903\|Ga0209488_10378941	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1049	Open in IMG/M
3300027909\|Ga0209382_10364638	Not Available	1615	Open in IMG/M
3300027909\|Ga0209382_10455082	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1417	Open in IMG/M
3300027909\|Ga0209382_10688695	Not Available	1101	Open in IMG/M
3300027909\|Ga0209382_10952229	Not Available	899	Open in IMG/M
3300028047\|Ga0209526_10298088	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1092	Open in IMG/M
3300028721\|Ga0307315_10298524	Not Available	511	Open in IMG/M
3300028793\|Ga0307299_10079465	Not Available	1219	Open in IMG/M
3300028807\|Ga0307305_10310027	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	718	Open in IMG/M
3300028809\|Ga0247824_10781157	Not Available	589	Open in IMG/M
3300028812\|Ga0247825_10616093	Not Available	778	Open in IMG/M
3300028828\|Ga0307312_10379420	Not Available	927	Open in IMG/M
3300028878\|Ga0307278_10141127	Not Available	1080	Open in IMG/M
3300028878\|Ga0307278_10495918	Not Available	533	Open in IMG/M
3300028881\|Ga0307277_10073066	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1426	Open in IMG/M
3300031228\|Ga0299914_11332310	Not Available	568	Open in IMG/M
3300033551\|Ga0247830_10043436	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2900	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	83.46%
Host-Associated	Host-Associated	16.54%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	79.70%
Plants	Host-Associated → Plants	16.54%
Aquatic	Environmental → Aquatic	3.76%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	79.70%
Rhizosphere	Host-Associated → Plants → Rhizosphere	13.53%
Sediment	Environmental → Aquatic → Sediment	2.26%
Freshwater	Environmental → Aquatic → Freshwater	1.50%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.50%
Roots	Host-Associated → Plants → Roots	1.50%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	64.66%
Loam	Environmental → Terrestrial → Soil → Loam	15.04%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	13.53%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.26%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.50%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	1.50%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.75%
Lentic	Environmental → Aquatic → Freshwater → Lentic	0.75%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	42.11%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	18.80%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	13.53%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	9.02%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.26%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.26%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.26%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.50%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	1.50%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.75%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	0.75%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.75%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.75%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.75%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	21.05%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	13.53%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	12.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	7.52%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	6.02%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	5.26%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	5.26%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.26%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	3.76%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	3.76%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.01%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.26%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.50%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	1.50%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	1.50%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.75%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	0.75%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.75%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.75%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.75%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental	Open in IMG/M
3300005168	Soil and rhizosphere microbial communities from Laval, Canada - mgLPC	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005587	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006048	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3	Host-Associated	Open in IMG/M
3300006573	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAC (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006894	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental	Open in IMG/M
3300010037	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25	Environmental	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010039	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300010325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaG	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012975	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015	Environmental	Open in IMG/M
3300012976	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaG	Environmental	Open in IMG/M
3300014166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015	Environmental	Open in IMG/M
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300017657	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09212015	Environmental	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300018078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_coex	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018432	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 T	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300021073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_b1 redo	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026295	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026308	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103 (SPAdes)	Environmental	Open in IMG/M
3300026547	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027663	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300027681	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M2 (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027902	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - CRP12 CR (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028721	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_355	Environmental	Open in IMG/M
3300028793	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_159	Environmental	Open in IMG/M
3300028807	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186	Environmental	Open in IMG/M
3300028809	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_PalmiticAcid_Day48	Environmental	Open in IMG/M
3300028812	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Vanillin_Day48	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300028881	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116	Environmental	Open in IMG/M
3300031228	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT153D57	Environmental	Open in IMG/M
3300033551	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI10216J12902_1008831671	3300000956	Soil	PRRLSELPALAERVKAGLVSASSDLAELSTLRSQLEDLARRVEAVADRYEDTADSQIASDLYAAERTLVSARRAVDKAIAALDDLARS*
JGI10216J12902_1023675951	3300000956	Soil	PRRLSELPALAERVKAALVSASSDRAELSTLRSQLEELARRVEAVADRYEDTADSQIASDLYAAERTLISARRAVDKAIGALGDLAR*
JGI12053J15887_101436662	3300001661	Forest Soil	MPASSDLAELSTVRSQLEELARRVEDVADRYEGTADSQIASDLYTAERTLISARRAVDKAIAALDDLARS*
JGI12053J15887_101778102	3300001661	Forest Soil	LIFRRKLPLLLTGVKAGVMPPSSDLAELTTLRSQLEELASRVESVAERYDDTADSQIASDLYAAERLLVSARRSFDKAIGALDDLAR*
Ga0066809_100410362	3300005168	Soil	VSASSDLAELSTVRSQLEELARRVVTVADRYEDTADSQIASDLYAAERTLISARRAVDKAIAALDDLAR*
Ga0066680_105288701	3300005174	Soil	MPASSDLAELSTVRSQLEELARRVEDVADRYEDTADSQIASDLYTAERTLISARRAVDKAIAALDDLARS*
Ga0066673_108064541	3300005175	Soil	MPASSDLAELSTVRSQLEELARRVEAVADRYEDTPDSQIASDLYAAERTLISARRAVDKAITALDDLARS*
Ga0066676_106923901	3300005186	Soil	MPASSDLAELSTVRSQLEELARRVEAVADRYEDTPDSQIASDLYAAERTLISARRAVDKA
Ga0066388_10000293312	3300005332	Tropical Forest Soil	VPASSDRAELSTLRSQLEELARRAMTVADRYDDTPDSQIASDLYAAERTLLNARRSLDRAIAALDDLTRS*
Ga0066388_1019897131	3300005332	Tropical Forest Soil	RLVRDRPNCPDSIGAGRLAGMPASSDLAELTTVRSQLEELARRIVTVADRYENTPDSQIASDLYAAERTLLNARRSVDKAITALDDIARS*
Ga0066388_1073896941	3300005332	Tropical Forest Soil	LPGLDGRGKADRVPASSDLAELSTVRSQLEELARRVVAVADRYEDTPDSQIASDLYAAERTLINARRSVDKAIAALDDLARS*
Ga0070694_1016585431	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	ASVPASSDLAELSTVRSQLEELARRVETVADRYEDTPDSQIASDLYAAERTLISARRAVDKAISALDDLARS*
Ga0070694_1017167991	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MPASSDLAELSTVRSQLEELARRLEAVADRYEDTADSQIASDLYAAERTLISARRAVDKAIAALDDLARS*
Ga0070708_1018374112	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	RSQLEELARRVETVADRYEDTPDSQIASDLYAAERTLISARRAVDKAISALDDLARS*
Ga0066689_103230672	3300005447	Soil	MPAASDLAELSTVRSQLEELARRVEAVADRYDDTADSQIASDLYTAERTLISARRAVDKAIAALDDLARS*
Ga0066687_104003151	3300005454	Soil	MPASSDLAELSTVRSQLEELARRVEEVADRYEDTADSQIASDLYTAERTLISARRAVDKA
Ga0070706_1015742902	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	VPASSDLAELSTVRSQLEELARRVETVADRYEDTADSQIASDLYTAERTLISARRAVDKAIA
Ga0070707_1006143392	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	VPASSDLAELSTVRSQLEELARRVETVADRYEDTPDSQIASDLYAAERTLISARRAVDKAISALDDLARS*
Ga0066661_100719782	3300005554	Soil	MPASSDLAELSTVRSQLEELARRVEEVADRYEDTADSQIASDLYTAERTLISARRAVDKAIAALDDLARS*
Ga0066707_104918832	3300005556	Soil	MPASSDLAELSTVRSQLEELARRVEAVADRYEDTADSPIASDLYTAERTLISARRAVDK
Ga0066698_109518941	3300005558	Soil	MPASSDLAELSTVRSQLEELARRVEAVADRYDDTADSQIASDLYTAERTLISARRAVDKAITALDDLARS*
Ga0066700_108099562	3300005559	Soil	VPASSDLAELSTVRSQLEELARRVEEVADRYEDTADSQIASNLYTAERTLISARRAV
Ga0066705_104125621	3300005569	Soil	LPASSDLAELSTVRLQLEELARRVEDVADRYEDTADSQIASDLYTAERTLISARRAVDKAITA
Ga0066691_107292011	3300005586	Soil	MPASSDLAELSTVRSQLEELARRVEDVADRYEDTADSQIASDLYTAERSLISARRAVDKAIAALDDLARS*
Ga0066654_109048831	3300005587	Soil	SMPASSDLAELSTVRSQLEELARRVEAVADRYEDTADSQIASDLYTAERTLISARRAVDKAIAALDDLARS*
Ga0066905_1005660671	3300005713	Tropical Forest Soil	VAASSDLAELTTVRSQLEELARRVVAVADRYEDTADSQVASDLYAAERTLLNARRSVDKAIAALDDLARS*
Ga0066905_1007317922	3300005713	Tropical Forest Soil	MPASSDLAELTTVRSQLEELARRIVTVADRYENTPDSQIASDLYAAERTLLNARRSVDKAITALDDIARS*
Ga0066903_1000045189	3300005764	Tropical Forest Soil	VRSQLEELARRVVTVADRYGDTADSQIASDLYAAERTLLNARRSVDKAIAALDDLARS*
Ga0066903_1018282251	3300005764	Tropical Forest Soil	VPASSDLAELSTVRSQLEELARRAVAVADRYEDTPDSQIASDLYAAERTLLNARRSVDKAIAALDDLARA*
Ga0081455_103067132	3300005937	Tabebuia Heterophylla Rhizosphere	LPDRGERGKAGRVAASSDLAELSTVRSQLEELARRVVAVADRYEDTPDSQIASDLYAAERTLLNARRSVDKAVAALDDLARS*
Ga0081455_103897651	3300005937	Tabebuia Heterophylla Rhizosphere	VPASSDLAELSTVRSQLEELARRVVAVADRYEDTPDSQVASDLYAAERTLLNARRSVDKAIAALDDLARS*
Ga0066656_104260642	3300006034	Soil	MPASSDLAELSTVRSQLEELARRVEAVADRYEDTADSQIASDLYTAERTLISARRAVDKAIAALDDLARS*
Ga0075363_1000066271	3300006048	Populus Endosphere	MPSNAAELATVRSQVEELTRRVEAVADQYRDTADSQLAADLYTAERQLIGARRALEKVLN
Ga0075363_1002512562	3300006048	Populus Endosphere	VPSNAAELATVRSQVEELARRVEAVADQYRDTADSQLAADLYTAERQLIGARRALDKVINSLGD*
Ga0074055_111441781	3300006573	Soil	MPASSDLAELSTVRSQLEELARRVEAVADRYEDTADSQIASDLYAAERTLISARRAVDKAIAALDDLARS*
Ga0066660_105751141	3300006800	Soil	MPAASDLAELSTVRSQLEELARRVEAVADRYEDTADSQIASDLYTAERTLISARRAVDKAIATLDDLAGS*
Ga0075428_1012366051	3300006844	Populus Rhizosphere	STPRRLSELPALAERVKAGLVSASSDLAELSTLRSQLEDLARRVEAVADRYEDTADSQIASDLYAAERTLVSARRAVDKAIGALGDLAR*
Ga0075421_1001050213	3300006845	Populus Rhizosphere	MPPSSDLAELTTLRSQLEDLARRVEAVAERYDDTPDSQIASDLFAVERLLISARRSLDKATSGLDDLAR*
Ga0075421_1002320563	3300006845	Populus Rhizosphere	VSASSDLAELSTLRSQLEDLARRVEAVADRYEDTADSQIASDLYAAERTLVSARRAVDKAIGALGDLAR*
Ga0075421_1010908842	3300006845	Populus Rhizosphere	LSELPALAERVKAGLVSASSDLAELSTLRSQLEDLARRVVAVADRYEDTADSQIASDLYAAERTLVSARRAVDKAIGALGDLAR*
Ga0075430_1001019173	3300006846	Populus Rhizosphere	LPALAERVKAGLLSASSDLAELSTLRSQLEDLARRVVAVADRYEDTADSQIASDLYAAERTLVSARRAVDKAIDALGDLAR*
Ga0075430_1015506832	3300006846	Populus Rhizosphere	VPASSDLAELSTVRSQLEELARRVETVADRYEDTPDSQIASDLYAAERTLISARRAVDKA
Ga0075431_1002912783	3300006847	Populus Rhizosphere	SASSDLAELSTLRSQLEDLARRVEAVADRYEDTADSQIASDLYAAERTLVSARRAVDKAIGALGDLAR*
Ga0075420_1000250343	3300006853	Populus Rhizosphere	MSASSDLAELSTLRSQLEDLARRVEAVADRYEDTADSQIASDLYAAERTLVSARRAVDKAIGALGDLAR*
Ga0075420_1001721663	3300006853	Populus Rhizosphere	STPRRLSELPALAERVKAGLVSASSDLAELSTLRSQLEDLARRVVAVADRYEDTADSQIASDLYAAERTLVSARRAVDKAIGALGDLAR*
Ga0075425_1028001142	3300006854	Populus Rhizosphere	TLRSQLEELTRRVEAVADRYDDTPDSQIASDLYAAERLLVSARRSLDKAIGELDDLAR*
Ga0075429_1003275442	3300006880	Populus Rhizosphere	LPALAERVKAGLVSASSDLAELSTLRSQLEDLARRVVAVADRYEDTADSQIASDLYAAERTLVSARRAVDKAIGALGDLAR*
Ga0079215_113886792	3300006894	Agricultural Soil	VSSNAAELATVRSQVEELTRRVEVVADQYRDTADSQLAADLYTAERQLIGARRAIEKVITSLGG*
Ga0066710_1035057322	3300009012	Grasslands Soil	MPASSDLAELSTVRSQLEELARRVEAVGDRYEDTADSQIASDLYAAERTLISARRAVDKAIAALDDLARS
Ga0099828_102489912	3300009089	Vadose Zone Soil	LLPSAAAGRLANVPASSDLAELSTLRSQLEELAHRVEAVGERYEDTPDSQIASDLYAVERMLVSARRSVDKAIAALDDLARS*
Ga0099827_119806411	3300009090	Vadose Zone Soil	AELSTVRSQLEELARRVEEVADRYEDTADSQIASDLYTAERTLISARRAVDKAIAALDDLARS*
Ga0075418_101209022	3300009100	Populus Rhizosphere	MSASSDLAELSTLRSQLEDLARRVEAVADRYEDTADSQIASDLYAAERTMVSARRAVDKAIGALGDLAR*
Ga0066709_1018270092	3300009137	Grasslands Soil	MPASSDLAELSTVRSQLEELARRVEAVADRYDDTADSQIASDLYTAERTLISARRAVDKAIAALDDLARS*
Ga0066709_1026594422	3300009137	Grasslands Soil	RSQLEELARRVEAVGDRYEDTADSQIASDLYAAERTLISARRAVDKAIAALDDLARS*
Ga0114129_124159602	3300009147	Populus Rhizosphere	VSASSDLAELSTLRSQLEELASRVEAVADRYDDTPDSQIASDLYAAERTLISARRAIDKAMAALDDLARS*
Ga0126313_111937122	3300009840	Serpentine Soil	MPASSDLAELSTLRSQLEELARRVEAVADRYEDTPDSQIASDLYTAERTLISARRAVDKAIGTLDDLAR*
Ga0126305_106541501	3300010036	Serpentine Soil	LPALAERVKAGLLSASSDLAELSTLRSQLEDLARRVEAVADRYEDTADSQIASDLYAAERTLVSARRAVDKAIGALGDLAR*
Ga0126304_110165402	3300010037	Serpentine Soil	MPASSDLAELSTLRSQLEELARRVEAVADRYEGTPDSQIASDLYAAERTMVSARRAVDKAIAALTDLAR*
Ga0126315_100192613	3300010038	Serpentine Soil	LPVLAERVKAGLMPASSDLAELSTLRSQLEELARRVEAVADRYEDTPDSQIASDLYTAERTLISARRAVDKAIGTLDDLAR*
Ga0126309_100239153	3300010039	Serpentine Soil	MPPSSDLAELTTLRSQLEELAQRVEVVAGRYDDTPDSQIASDLYAAERLLVSARRSLDKAIGSLDDLAR*
Ga0126311_119294442	3300010045	Serpentine Soil	MPASSDLAELSTLRSQLEALARRVEAVADRYGDTADSQIASDLYAAERTLVSARRAVDKAIGALGDLAR*
Ga0126382_103340472	3300010047	Tropical Forest Soil	VKAGLVAASSDLAELTTVRSQLEELARRVVAVADRYEDTADSQVASDLYAAERTLLNARRSVDKAIAALDDLARS*
Ga0126306_100086577	3300010166	Serpentine Soil	VPASSDLAELSTLRSQLEELARRVEAVADRYEDTPDSQIASDLYAAERTMVSARRAVDKAIAALTDLAR*
Ga0134064_100629902	3300010325	Grasslands Soil	VPASSDLAELSTVRSQLEELARRVEAVADRYDDTADSQIASDLYAAERTLISARRAVDKAITALDDLARS*
Ga0126377_102494941	3300010362	Tropical Forest Soil	VKAGLVAASSDLAELTTVRSQLEELARRVVAVADRYEDTADSQVASDLYAAERTLLNARRSVDKAIAALDDLARP*
Ga0126379_136874351	3300010366	Tropical Forest Soil	GERVKAGHVPASSDLAELSTVRSQLEELARRAVAVADRYEDTPDSQIASDLYAAERTLLNARRSVDKAIAALDDLARA*
Ga0137364_100636773	3300012198	Vadose Zone Soil	MPASSDLAELSTVRSQLEELARRVEAVGDRYEDTADSQIASDLYAAERTLISARRAVDKAIAALDDLARS*
Ga0137365_100472113	3300012201	Vadose Zone Soil	VSASSDLAELSTLRSQLEELASRVEAVADRYDDTPDSQIASDLYAAERTLISGRRAIDKAIAALDDLARS*
Ga0137399_106804841	3300012203	Vadose Zone Soil	MSASSDLAELSTVRSQLEELARRVEDVADRYDDTADSQIASDLYTAERTLISARRAVDKAIAALDDLARS*
Ga0137374_100345516	3300012204	Vadose Zone Soil	MLGSVPASSDLAELTTLRSQLEDLARRVEAVAQRYQDTSDSQVATDLFSAERMIVGARRSVDKAIGALEGLARS*
Ga0137374_100805263	3300012204	Vadose Zone Soil	MLGTVPASSDLAELTTLRSQLEDLARRVEAVAERYQDTSDSQVATDLFSAERMLVGARRSVDKAIGALEDLARS*
Ga0137380_107341411	3300012206	Vadose Zone Soil	VPASSDLAELSTVRSQLEELARRVEAVADRYEETPDSQIASDLYTAERTLISARRAVDKAIAALDDLARS*
Ga0137381_105566921	3300012207	Vadose Zone Soil	RSNARRLASMPASSDLAELSTVRSQLEELARRVEAVGDRYEDTADSQIASDLYTAERTLISARRAVDKAIAALDDLARS*
Ga0137379_107551282	3300012209	Vadose Zone Soil	VPASSDLAELSTVRSQLEELARRVEEVADRYEDTADSQIASDLYTAERTLISARRAVDKAVAALDDLARS*
Ga0137378_103926562	3300012210	Vadose Zone Soil	LPAAAEGVKAGDVPASSDLAELSTLRSQLEDVARRVQAVAERYRDTSDSQVASDLYAVERMVIGARRSVDKAIAALEDLARS*
Ga0137378_104986292	3300012210	Vadose Zone Soil	MPASSDLAELSTVRSQLEELARRVEAVADRYEDTADSQIASDLYAAERTLISARRAVDKAIAALDDLAS*
Ga0137377_109697761	3300012211	Vadose Zone Soil	VRSQLEELARRVEEVADRYEDTADSQIASDLYTAERTLISARRAVDKAIAALDDLARS*
Ga0137372_104607022	3300012350	Vadose Zone Soil	ASSDLAELSTVRSQLEELARRVEAVADRYEETPDSQIASDLYTAERTLISARRAVDKAVAALDDLARS*
Ga0137386_112919872	3300012351	Vadose Zone Soil	MPASSDLAELSTVRSQLEELARRVEAVADRYEDTADSQIASDLYAAERTLISARRAVDKAITALDDLARS*
Ga0137367_103636611	3300012353	Vadose Zone Soil	MPASSDLAELSTVRSQLEELARRVEDVADRYEDTADSQIASDLYAAERTMISARRAVDKAIGALDDLAR*
Ga0137366_106285351	3300012354	Vadose Zone Soil	MPASSDLAELSTVRSQLEELARRVEEVADRYEDTADSQIASDLYTAERTLISARRAVDKAVAALDDLARS*
Ga0137371_108296382	3300012356	Vadose Zone Soil	MPASSDLAELSTVRSQLEELARRVEDVADRYEDTADSQIASDLYTAERTLISARRAVDKAITALDDLARS*
Ga0137384_103128632	3300012357	Vadose Zone Soil	AELPAAAEGVKAGDVPASSDLAELSTLRSQLEDVARRVQAVAERYRDTSDSQVASDLYAVERMVIGARRSVDKAIAALEDLARS*
Ga0137368_105641272	3300012358	Vadose Zone Soil	LPALAERVKAGLVSASSDLAELSTLRSQLEDLARRVEAVADRYEDTSDSQIASDLYAAERTLVSAR
Ga0137368_107874852	3300012358	Vadose Zone Soil	SASSDRAELSTLRSQLEELARRVEAVADRYEDTADSQIASDLYAAERTMISARRAVDKAIGALGDLAR*
Ga0137385_107904191	3300012359	Vadose Zone Soil	PCTDSRLSELPGPAERVKAGSVPASSDLAELSTVRSQLEELARRVEEVADRYEDTADSQIASDLYAAERTLISARRAVDKAIAALDDLARS*
Ga0137375_102856493	3300012360	Vadose Zone Soil	LPALAERVKAGLVSASSDLAELSTLRSQLEDLARRVEAVADRYEDTSDSQIASDLYAAERTLVSARRAVDKAIGALGDLAR*
Ga0137413_113765991	3300012924	Vadose Zone Soil	MPASSDLAELSTVRSQLEELARRVEDVADRYDDTADSQIASDLYTAERTLISARRAVDKAIAALDD
Ga0164299_108362702	3300012958	Soil	MHDSRLSELPVPVERVKAGSMPASSDLAELSTVRSQLEELARRVEAVADRYEDTADSQIASDLYTAERTLISARRAVDKAIAALDDLARS*
Ga0164301_110196352	3300012960	Soil	MPASSDLAELSTVRSQLDELARRVEAVADRYEDTADSQIASDLYAAERTLISARRAVDKAIAALDDRARS*
Ga0126369_100121328	3300012971	Tropical Forest Soil	LPGLGERVKAGHVPASSDLAELSTVRSQLEELARRAVAVADRYEDTPDSQIASDLYAAERTLLNARRSVDKAIAALDDLARA*
Ga0134110_100883392	3300012975	Grasslands Soil	VPASSDLAELSTVRSQLEELARRVEAVADRYEDTPDSQIASDLYAAERTLISARRAVDKAITALDDLARS*
Ga0134076_104459032	3300012976	Grasslands Soil	MPAASDLAELSTVRSQLEELARRVEAVADRYDDTADSQIASDLYTAERTLISARRAVDKAITALDDLARS*
Ga0134079_103078002	3300014166	Grasslands Soil	MPASSDLAELSTVRSQLEELARRVEAVADRYEDTADSQIASDLYTAERTLISARRAVDK
Ga0137412_105659652	3300015242	Vadose Zone Soil	MPASSDLAELSTVRSQLEELARRVEDVADRYDDTADSQIASDLYTAERTLISARRAVDKAIAALDDLARS*
Ga0134074_14131782	3300017657	Grasslands Soil	MPASSDLAELSTVRSQLEELARRVEAVADRYEDTPDSQIASDLYAAERTLISARRAVDKAITALDDLARS
Ga0184619_101644321	3300018061	Groundwater Sediment	KAAVMSASSDRAELSTLRSQLEELARRVEAVADRYEDTADSQIASDLYAAERTMISARRAVDKAIGALDDLAR
Ga0184612_101466582	3300018078	Groundwater Sediment	LPGLAERVKAAVMSASSDRAELSTLRSQLEELAHRVEAVADRYEDTADSQIASDLYAAERTMISARRAVDKAIGALDDLAR
Ga0066655_108255572	3300018431	Grasslands Soil	VPASSDLAELSTVRSQLDELARRVEAVADRYEDTADSQIASDLYTAERTLISARRAVDKAITALDDLARS
Ga0190275_105948152	3300018432	Soil	VSSNAAELATVRSQVEELTRRVEVVADQYRDTADSQLAADLYTAERQLIGARRAIEKVITSLGG
Ga0066667_103742902	3300018433	Grasslands Soil	MPASSDLAELSTVRSQLEELARRVEEVADRYEDTADSQIASDLYTAERTLISARRAVDKAISALDDLARS
Ga0066662_106071592	3300018468	Grasslands Soil	MPASSDLAELSTVRSQLEELARRVEEVADRYEDTADSQIASDLYTAERTLISARRAVDKAIAALDDLARS
Ga0210378_103069102	3300021073	Groundwater Sediment	MSASSDRAELSTLRSQLEELARRVEAVADRYEDTADSQIASDLYAAERTMISARRAVDKAIGALDDLAR
Ga0222622_113439862	3300022756	Groundwater Sediment	MSASSDRAELSTLRSQLEELARRVEAVADRYEDTADSQIASDLYAAERTMISARRAVDKAIGALDDLAG
Ga0207684_101214092	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MPASSDLAELSTVRSQLEELARRLEAVADRYEDTADSQIASDLYAAERTLISARRAVDKAIAALDDLARS
Ga0207684_107051001	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	VPASSDLAELSTVRSQLEELARRVETVADRYEDTADSQIASDLYTAERTLISARRAVDKAIAALDDLARS
Ga0209234_10291472	3300026295	Grasslands Soil	MPASSDLAELSTVRSQLEELARRVEDVADRYEDTADSQIASDLYTAERTLISARRAVDKAIAALDDLARS
Ga0209234_11975132	3300026295	Grasslands Soil	LPFWVTGVKAGVVPASSDRAELSTLRSQLEELTRRVEAVADQYDDTPDSQIASDLYAAERVLVSARRSLDKAIGELDDLAR
Ga0209265_11538691	3300026308	Soil	MPASSDLAELSTVRSQLEELARRVEAVADRYEDTPDSQIASDLYAAERTLISARRAVDKAIT
Ga0209156_101108251	3300026547	Soil	MPASSDLAELSTVRSQLEELARRVEAVADRYEDTPDSQIASDLYAAERTLISARRAVDKAITALDDLA
Ga0179587_107806921	3300026557	Vadose Zone Soil	MSASSDLAELSTVRSQLEELARRVEDVADRYEDTADSQIASDLYTAERTLISARRAVDKAIAALDDLARS
Ga0208990_11571492	3300027663	Forest Soil	TFHRNHEALIFRRKLPLLLTGVKAGVMPPSSDLAELTTLRSQLEELASRVESVAERYDDTADSQIASDLYAAERLLVSARRSFDKAIGALDDLAR
Ga0208991_10360392	3300027681	Forest Soil	MPASSDLAELSTVRSQLEELARRVEDVADRYEGTADSQIASDLYTAERTLISARRAVDKAIAALDDLARS
Ga0209814_100069005	3300027873	Populus Rhizosphere	VPASSDLAELSTVRSQLEELARRVETVADRYEDTPDSQIASDLYAAERTLISARRAVDKAISALDDLARS
Ga0209590_110486901	3300027882	Vadose Zone Soil	AELSTVRSQLEELARRVEEVADRYEDTADSQIASDLYTAERTLISARRAVDKAIAALDDLARS
Ga0209048_1000025147	3300027902	Freshwater Lake Sediment	VTAAESDLAELSTVRTLLEELTARVERVADRYKDTPDSSFAAELYTAERGLISARRSIDRTISGLGGSR
Ga0209488_103789412	3300027903	Vadose Zone Soil	MPASSDLAELSTVRSQLEELARRVENVADRYEDTADSQIASDLYTAERTLISARRAVDKAIAALDDLARS
Ga0209382_103646381	3300027909	Populus Rhizosphere	MPPSSDLAELTTLRSQLEDLARRVEAVAERYDDTPDSQIASDLFAVERLLISARRSLDKATSGLDDLAR
Ga0209382_104550821	3300027909	Populus Rhizosphere	VPASSDLAELTTVRSQLEELARRVETVADRYEDTPDSQIASDLYAAERTLISARRAVDKAISALDDLARS
Ga0209382_106886951	3300027909	Populus Rhizosphere	STPRRLSELPALAERVKAGLVSASSDLAELSTLRSQLEDLARRVVAVADRYEDTADSQIASDLYAAERTLVSARRAVDKAIGALGDLAR
Ga0209382_109522292	3300027909	Populus Rhizosphere	LPALAERVKAGLLSASSDLAELSTLRSQLEDLARRVVAVADRYEDTADSQIASDLYAAERTLVSARRAVDKAIGALGDLAR
Ga0209526_102980881	3300028047	Forest Soil	MPASSDLAELSTVRSQLEELARRVEAVADRYEDTADSQIASDLYAAERTLIGARRAVDKAIA
Ga0307315_102985241	3300028721	Soil	MSASSDRAELSTLRSQLEELARRVEAVADRYEDTADSQIASDLYAAERTMISARRAVDKAIAALDDLARS
Ga0307299_100794652	3300028793	Soil	MSASSDRAELSTLRSQLEELARRVEAVADRYEDTADSQIASDLYAAERTMISARRAIDKAIGALDDLAR
Ga0307305_103100271	3300028807	Soil	STPRRLSELPALAERVKAAVMSASSDRAELSTLRSQLEELARRVEAVADRYEDTADSQIASDLYAAERTMISARRAVDKAIGALDDLAR
Ga0247824_107811572	3300028809	Soil	MPSNAAELATVRSQVEELTRRVEAVADQYLDTADSQLAADLYTAERQLIGARRALEKVLNSLGT
Ga0247825_106160932	3300028812	Soil	VSASSDLAELSTLRSQLEDLARRVEAVADRYEDTADSQIASDLYAAERTLVSARRAVDKAIGALGDLAR
Ga0307312_103794201	3300028828	Soil	MSASSDRAELSTLRSQLEELARRVEAVADRYEDTADSQIASDLYAAERTMISARRAI
Ga0307278_101411271	3300028878	Soil	MSASSDRAELSTLRSQLEELARRVEAVADRYEDTADSQIASDLYAAERTMISARRA
Ga0307278_104959182	3300028878	Soil	ELPGLAERVKAGLVSASSDLAELSTLRSQLEDLARRVEAVADRYEDTADSQIASDLYAAERTLVSARRAVDKAIGALGDLAR
Ga0307277_100730662	3300028881	Soil	MSASSDRAELSTLRSQLEELARRVEAVADRYQDTADSQIASDLYAAERTMISARRAVDKAIGALDDLAR
Ga0299914_113323101	3300031228	Soil	CQAGAVSSNAAELATVRSQVEELTRRIEVVADQYRDTADSQLAADLYTAERQLIGARRAIEKVITSLGG
Ga0247830_100434363	3300033551	Soil	MPSNAAELATVRSQVEELTRRVEAVADQYRDTADSQLAADLYTAERQLIGARRALEKVLNSLGT

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F059938

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences