Metagenome / Metatranscriptome Family F059813

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F059813
Family Type	Metagenome / Metatranscriptome
Number of Sequences	133
Average Sequence Length	48 residues
Representative Sequence	GLAFILVPLMALLLSYFEIWPERALGAVFGDPSRLYEYDPDNPASSRRRR
Number of Associated Samples	107
Number of Associated Scaffolds	133

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.78 %
% of genes near scaffold ends (potentially truncated)	90.98 %
% of genes from short scaffolds (< 2000 bps)	91.73 %
Associated GOLD sequencing projects	103
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.38

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (66.917 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (23.308 % of family members)
Environment Ontology (ENVO)	Unclassified (44.361 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (57.895 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 38.46% β-sheet: 0.00% Coil/Unstructured: 61.54%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.38
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.38
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 133 Family Scaffolds
PF03352	Adenine_glyco	35.34
PF13460	NAD_binding_10	12.03
PF01471	PG_binding_1	2.26
PF08002	DUF1697	2.26
PF00583	Acetyltransf_1	1.50
PF13378	MR_MLE_C	1.50
PF12329	TMF_DNA_bd	0.75
PF11066	DUF2867	0.75
PF13561	adh_short_C2	0.75
PF00365	PFK	0.75
PF14559	TPR_19	0.75
PF04140	ICMT	0.75
PF05988	DUF899	0.75
PF00076	RRM_1	0.75
PF00763	THF_DHG_CYH	0.75
PF08541	ACP_syn_III_C	0.75
PF01176	eIF-1a	0.75
PF02746	MR_MLE_N	0.75
PF00857	Isochorismatase	0.75
PF01513	NAD_kinase	0.75
PF13411	MerR_1	0.75

COG ID	Name	Functional Category	% Frequency in 133 Family Scaffolds
COG2818	3-methyladenine DNA glycosylase Tag	Replication, recombination and repair [L]	35.34
COG3797	Uncharacterized conserved protein, DUF1697 family	Function unknown [S]	2.26
COG4948	L-alanine-DL-glutamate epimerase or related enzyme of enolase superfamily	Cell wall/membrane/envelope biogenesis [M]	1.50
COG0190	5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase	Coenzyme transport and metabolism [H]	0.75
COG0205	6-phosphofructokinase	Carbohydrate transport and metabolism [G]	0.75
COG0361	Translation initiation factor IF-1	Translation, ribosomal structure and biogenesis [J]	0.75
COG1335	Nicotinamidase-related amidase	Coenzyme transport and metabolism [H]	0.75
COG1535	Isochorismate hydrolase	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.75
COG4312	Predicted dithiol-disulfide oxidoreductase, DUF899 family	General function prediction only [R]	0.75

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	68.42 %
Unclassified	root	N/A	31.58 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	68.42 %
Unclassified	root	N/A	31.58 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	66.92 %
Unclassified	root	N/A	31.58 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	1.50 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.58 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	28.57 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	6.77 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.26 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.50 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	1.50 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.58 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	28.57 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	6.02 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.50 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	1.50 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.75 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.75 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.58 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	7.52 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6.02 %
Spartobacteria	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria	2.26 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	1.50 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.75 %
Bacilli	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli	0.75 %
Anaerolineae	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae	0.75 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.58 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	7.52 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6.02 %
Chthoniobacterales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales	2.26 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	1.50 %
Anaerolineales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales	0.75 %
Bacillales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales	0.75 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.75 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.58 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	7.52 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6.02 %
Chthoniobacteraceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae	2.26 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	1.50 %
Anaerolineaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae	0.75 %
Bacillales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales	0.75 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.75 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.58 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	7.52 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6.02 %
Candidatus Udaeobacter	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter	2.26 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	1.50 %
unclassified Anaerolineaceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae → unclassified Anaerolineaceae	0.75 %
Bacillales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales	0.75 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.75 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.58 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	7.52 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6.02 %
Candidatus Udaeobacter copiosus	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	1.50 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	1.50 %
unclassified Candidatus Udaeobacter	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → unclassified Candidatus Udaeobacter	0.75 %
Anaerolineaceae bacterium 4572_32.1	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae → unclassified Anaerolineaceae → Anaerolineaceae bacterium 4572_32.1	0.75 %
Bacillales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales	0.75 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.75 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.58 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	7.52 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6.02 %
Candidatus Udaeobacter copiosus	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	1.50 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	1.50 %
Candidatus Udaeobacter sp.	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → unclassified Candidatus Udaeobacter → Candidatus Udaeobacter sp.	0.75 %
Anaerolineaceae bacterium 4572_32.1	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae → unclassified Anaerolineaceae → Anaerolineaceae bacterium 4572_32.1	0.75 %
Bacillales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales	0.75 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.75 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.75 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459010\|GIO7OMY02JWFBB	Not Available	515	Open in IMG/M
3300000956\|JGI10216J12902_117606310	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1047	Open in IMG/M
3300004463\|Ga0063356_101299154	All Organisms → cellular organisms → Archaea	1064	Open in IMG/M
3300004643\|Ga0062591_100373897	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1164	Open in IMG/M
3300005093\|Ga0062594_102313162	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	585	Open in IMG/M
3300005093\|Ga0062594_103394978	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	501	Open in IMG/M
3300005171\|Ga0066677_10723112	Not Available	555	Open in IMG/M
3300005172\|Ga0066683_10172114	All Organisms → cellular organisms → Bacteria	1333	Open in IMG/M
3300005172\|Ga0066683_10369085	Not Available	890	Open in IMG/M
3300005172\|Ga0066683_10448724	All Organisms → cellular organisms → Bacteria	791	Open in IMG/M
3300005176\|Ga0066679_10300895	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1043	Open in IMG/M
3300005332\|Ga0066388_104466698	All Organisms → cellular organisms → Bacteria	712	Open in IMG/M
3300005347\|Ga0070668_100166358	All Organisms → cellular organisms → Bacteria	1792	Open in IMG/M
3300005444\|Ga0070694_101675533	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → unclassified Candidatus Udaeobacter → Candidatus Udaeobacter sp.	540	Open in IMG/M
3300005447\|Ga0066689_10921880	Not Available	539	Open in IMG/M
3300005536\|Ga0070697_101036422	Not Available	730	Open in IMG/M
3300005552\|Ga0066701_10807483	Not Available	559	Open in IMG/M
3300005553\|Ga0066695_10670970	Not Available	611	Open in IMG/M
3300005557\|Ga0066704_10018579	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4055	Open in IMG/M
3300005559\|Ga0066700_10426877	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	933	Open in IMG/M
3300005575\|Ga0066702_10715201	All Organisms → cellular organisms → Bacteria	597	Open in IMG/M
3300005586\|Ga0066691_10892826	Not Available	523	Open in IMG/M
3300005598\|Ga0066706_10085303	All Organisms → cellular organisms → Bacteria	2252	Open in IMG/M
3300005598\|Ga0066706_10112340	All Organisms → cellular organisms → Bacteria	1998	Open in IMG/M
3300006034\|Ga0066656_10352835	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	951	Open in IMG/M
3300006796\|Ga0066665_10072529	All Organisms → cellular organisms → Bacteria	2449	Open in IMG/M
3300006796\|Ga0066665_10479712	All Organisms → cellular organisms → Bacteria	1022	Open in IMG/M
3300007255\|Ga0099791_10484178	Not Available	600	Open in IMG/M
3300007255\|Ga0099791_10519464	Not Available	579	Open in IMG/M
3300009012\|Ga0066710_102567351	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	734	Open in IMG/M
3300009012\|Ga0066710_104478268	All Organisms → cellular organisms → Bacteria	522	Open in IMG/M
3300009090\|Ga0099827_10177271	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae → unclassified Anaerolineaceae → Anaerolineaceae bacterium 4572_32.1	1760	Open in IMG/M
3300009137\|Ga0066709_102192991	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	762	Open in IMG/M
3300009137\|Ga0066709_102321507	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	734	Open in IMG/M
3300009137\|Ga0066709_103818158	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	547	Open in IMG/M
3300010301\|Ga0134070_10243007	Not Available	671	Open in IMG/M
3300010303\|Ga0134082_10296336	All Organisms → cellular organisms → Bacteria	677	Open in IMG/M
3300010321\|Ga0134067_10100349	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	989	Open in IMG/M
3300010322\|Ga0134084_10160980	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	761	Open in IMG/M
3300010325\|Ga0134064_10443641	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	527	Open in IMG/M
3300010335\|Ga0134063_10045917	All Organisms → cellular organisms → Bacteria → Acidobacteria	1897	Open in IMG/M
3300010335\|Ga0134063_10494816	All Organisms → cellular organisms → Bacteria	611	Open in IMG/M
3300010359\|Ga0126376_12749023	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	541	Open in IMG/M
3300010362\|Ga0126377_11539138	All Organisms → cellular organisms → Bacteria	739	Open in IMG/M
3300010364\|Ga0134066_10388385	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	529	Open in IMG/M
3300010373\|Ga0134128_12383622	All Organisms → cellular organisms → Bacteria	583	Open in IMG/M
3300012019\|Ga0120139_1038524	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1121	Open in IMG/M
3300012198\|Ga0137364_10890312	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	673	Open in IMG/M
3300012199\|Ga0137383_10966663	Not Available	621	Open in IMG/M
3300012200\|Ga0137382_10280241	All Organisms → cellular organisms → Bacteria	1160	Open in IMG/M
3300012203\|Ga0137399_11764394	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	507	Open in IMG/M
3300012204\|Ga0137374_10450776	All Organisms → cellular organisms → Archaea	1010	Open in IMG/M
3300012207\|Ga0137381_11135695	Not Available	672	Open in IMG/M
3300012208\|Ga0137376_10026256	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	4561	Open in IMG/M
3300012211\|Ga0137377_10766014	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	898	Open in IMG/M
3300012285\|Ga0137370_10479821	Not Available	760	Open in IMG/M
3300012285\|Ga0137370_10580851	Not Available	691	Open in IMG/M
3300012353\|Ga0137367_11003220	All Organisms → cellular organisms → Bacteria	569	Open in IMG/M
3300012354\|Ga0137366_10020058	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	5216	Open in IMG/M
3300012354\|Ga0137366_10398901	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1002	Open in IMG/M
3300012356\|Ga0137371_10595344	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	850	Open in IMG/M
3300012356\|Ga0137371_10918266	Not Available	665	Open in IMG/M
3300012360\|Ga0137375_10586809	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales	931	Open in IMG/M
3300012923\|Ga0137359_10645975	Not Available	925	Open in IMG/M
3300012977\|Ga0134087_10427021	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	651	Open in IMG/M
3300012977\|Ga0134087_10587410	All Organisms → cellular organisms → Bacteria	574	Open in IMG/M
3300013306\|Ga0163162_12505816	All Organisms → cellular organisms → Bacteria	593	Open in IMG/M
3300013308\|Ga0157375_10567759	All Organisms → cellular organisms → Bacteria	1295	Open in IMG/M
3300014150\|Ga0134081_10004096	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	3661	Open in IMG/M
3300014157\|Ga0134078_10381398	All Organisms → cellular organisms → Bacteria	628	Open in IMG/M
3300014157\|Ga0134078_10570857	Not Available	537	Open in IMG/M
3300014166\|Ga0134079_10576047	Not Available	556	Open in IMG/M
3300014325\|Ga0163163_11088718	All Organisms → cellular organisms → Bacteria	862	Open in IMG/M
3300015356\|Ga0134073_10067840	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	994	Open in IMG/M
3300015358\|Ga0134089_10451784	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	556	Open in IMG/M
3300015359\|Ga0134085_10167515	Not Available	937	Open in IMG/M
3300015372\|Ga0132256_102157239	All Organisms → cellular organisms → Bacteria	662	Open in IMG/M
3300018028\|Ga0184608_10157244	All Organisms → cellular organisms → Bacteria	983	Open in IMG/M
3300018028\|Ga0184608_10201739	All Organisms → cellular organisms → Bacteria	871	Open in IMG/M
3300018075\|Ga0184632_10198967	All Organisms → cellular organisms → Bacteria	882	Open in IMG/M
3300018431\|Ga0066655_10971943	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	585	Open in IMG/M
3300018433\|Ga0066667_10125831	All Organisms → cellular organisms → Bacteria	1761	Open in IMG/M
3300018433\|Ga0066667_10224989	All Organisms → cellular organisms → Bacteria	1401	Open in IMG/M
3300018482\|Ga0066669_11686424	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	581	Open in IMG/M
3300019361\|Ga0173482_10367908	All Organisms → cellular organisms → Bacteria	657	Open in IMG/M
3300019362\|Ga0173479_10504678	Not Available	611	Open in IMG/M
3300019875\|Ga0193701_1036945	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1001	Open in IMG/M
3300019885\|Ga0193747_1062157	All Organisms → cellular organisms → Bacteria	924	Open in IMG/M
3300019886\|Ga0193727_1042785	All Organisms → cellular organisms → Bacteria	1494	Open in IMG/M
3300020004\|Ga0193755_1097621	All Organisms → cellular organisms → Bacteria	932	Open in IMG/M
3300020006\|Ga0193735_1137972	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	647	Open in IMG/M
3300020027\|Ga0193752_1113512	All Organisms → cellular organisms → Bacteria	1096	Open in IMG/M
3300020170\|Ga0179594_10374551	Not Available	540	Open in IMG/M
3300021413\|Ga0193750_1059843	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	773	Open in IMG/M
3300022694\|Ga0222623_10110876	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1068	Open in IMG/M
3300023058\|Ga0193714_1040110	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	683	Open in IMG/M
3300025935\|Ga0207709_10048825	All Organisms → cellular organisms → Bacteria	2580	Open in IMG/M
3300025936\|Ga0207670_10535455	Not Available	955	Open in IMG/M
3300025942\|Ga0207689_11739838	All Organisms → cellular organisms → Bacteria	516	Open in IMG/M
3300026277\|Ga0209350_1105651	Not Available	667	Open in IMG/M
3300026309\|Ga0209055_1164526	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	712	Open in IMG/M
3300026310\|Ga0209239_1179044	Not Available	801	Open in IMG/M
3300026315\|Ga0209686_1129084	All Organisms → cellular organisms → Bacteria	824	Open in IMG/M
3300026325\|Ga0209152_10255581	Not Available	651	Open in IMG/M
3300026326\|Ga0209801_1135105	All Organisms → cellular organisms → Bacteria	1050	Open in IMG/M
3300026326\|Ga0209801_1171419	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	899	Open in IMG/M
3300026326\|Ga0209801_1194410	Not Available	820	Open in IMG/M
3300026327\|Ga0209266_1259044	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	556	Open in IMG/M
3300026331\|Ga0209267_1087142	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1342	Open in IMG/M
3300026536\|Ga0209058_1116948	Not Available	1320	Open in IMG/M
3300026537\|Ga0209157_1380542	Not Available	509	Open in IMG/M
3300026538\|Ga0209056_10709146	Not Available	509	Open in IMG/M
3300026540\|Ga0209376_1405432	Not Available	510	Open in IMG/M
3300026547\|Ga0209156_10447786	All Organisms → cellular organisms → Bacteria	534	Open in IMG/M
3300027903\|Ga0209488_10951321	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	599	Open in IMG/M
3300028715\|Ga0307313_10276063	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	523	Open in IMG/M
3300028796\|Ga0307287_10269292	Not Available	644	Open in IMG/M
3300028828\|Ga0307312_11007977	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	551	Open in IMG/M
3300028885\|Ga0307304_10526204	Not Available	543	Open in IMG/M
3300030916\|Ga0075386_12184550	Not Available	849	Open in IMG/M
3300031231\|Ga0170824_100609042	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1038	Open in IMG/M
3300031231\|Ga0170824_103172724	Not Available	1232	Open in IMG/M
3300031231\|Ga0170824_105067293	Not Available	553	Open in IMG/M
3300031231\|Ga0170824_114434125	Not Available	589	Open in IMG/M
3300031720\|Ga0307469_11674698	Not Available	613	Open in IMG/M
3300031720\|Ga0307469_12437607	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	511	Open in IMG/M
3300031744\|Ga0306918_10141955	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1765	Open in IMG/M
3300031941\|Ga0310912_10661156	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	811	Open in IMG/M
3300031942\|Ga0310916_10151022	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1916	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	93.98%
Host-Associated	Host-Associated	6.02%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	90.98%
Plants	Host-Associated → Plants	6.02%
Aquatic	Environmental → Aquatic	3.01%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	90.98%
Sediment	Environmental → Aquatic → Sediment	3.01%
Rhizosphere	Host-Associated → Plants → Rhizosphere	3.01%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.26%
Roots	Host-Associated → Plants → Roots	0.75%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	86.47%
Loam	Environmental → Terrestrial → Soil → Loam	4.51%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.01%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.26%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.50%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.50%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.75%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	43.61%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	32.33%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	7.52%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.01%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.26%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.26%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.26%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.50%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.50%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.50%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.75%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.75%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.75%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	23.31%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	18.05%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	12.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	10.53%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	8.27%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	3.01%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.26%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.26%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.26%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.50%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.50%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.50%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.50%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.75%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.75%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	0.75%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.75%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.75%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.75%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.75%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.75%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.75%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.75%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.75%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.75%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.75%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.75%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459010	Grass soil microbial communities from Rothamsted Park, UK - December 2009 direct MP BIO1O1 lysis 0-9cm (no DNA from 10 to 21cm!!!)	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300010301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015	Environmental	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300010321	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09212015	Environmental	Open in IMG/M
3300010322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaG	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010364	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09212015	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300012019	Permafrost microbial communities from Nunavut, Canada - A7_5cm_12M	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014150	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300014157	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300014166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300015356	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015358	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015359	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018075	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b1	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300019362	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)	Environmental	Open in IMG/M
3300019875	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3s2	Environmental	Open in IMG/M
3300019885	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1m2	Environmental	Open in IMG/M
3300019886	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c2	Environmental	Open in IMG/M
3300020004	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1a2	Environmental	Open in IMG/M
3300020006	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1m2	Environmental	Open in IMG/M
3300020027	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1c1	Environmental	Open in IMG/M
3300020170	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021413	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c1	Environmental	Open in IMG/M
3300022694	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coex	Environmental	Open in IMG/M
3300023058	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2m1	Environmental	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026277	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026309	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110 (SPAdes)	Environmental	Open in IMG/M
3300026310	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026315	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126 (SPAdes)	Environmental	Open in IMG/M
3300026325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)	Environmental	Open in IMG/M
3300026326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127 (SPAdes)	Environmental	Open in IMG/M
3300026327	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132 (SPAdes)	Environmental	Open in IMG/M
3300026331	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137 (SPAdes)	Environmental	Open in IMG/M
3300026524	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150 (SPAdes)	Environmental	Open in IMG/M
3300026536	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147 (SPAdes)	Environmental	Open in IMG/M
3300026537	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135 (SPAdes)	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300026540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134 (SPAdes)	Environmental	Open in IMG/M
3300026547	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300028715	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_203	Environmental	Open in IMG/M
3300028796	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_141	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028885	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185	Environmental	Open in IMG/M
3300030916	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA12 EcM (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
F62_05306620	2170459010	Grass Soil	AARGLAFILVPPMALLVSYFEICPDRLLGVVFGDPLRLYEYDLDNPASSRRRR
JGI10216J12902_1176063103	3300000956	Soil	MAAHGLYFILVPLMALLLSYLEIWPERALGAVFGDPSRLWEYDPDDPTSTRRRR*
Ga0063356_1012991541	3300004463	Arabidopsis Thaliana Rhizosphere	AHGLAFILVPLLALLLSYFEIWPERALGAVFGDPSRLYEYDPGDPASIRRRR*
Ga0062591_1003738973	3300004643	Soil	MAAHGLYFILVPLMALLLSYLEIWPERALGAVFGDPSRLWEYDPDDPTSSRRRP*
Ga0062594_1023131621	3300005093	Soil	FIMAAHGLAFILVPLMALLLSYFEIWPGRALGTVFGDPSRLYEYDPDDPASSRRRH*
Ga0062594_1033949781	3300005093	Soil	FIMAAHGLAFILVPLMALLLSYFEIWPDRALGAVFGDPSRLYEYDPDNPASTRRRR*
Ga0066677_107231122	3300005171	Soil	LAFILVPLMALLLSYFEIWPERALGAVFGDPARLYEYDPENPASSRRRH*
Ga0066683_101721143	3300005172	Soil	LYFILVPLMALLLTYLEIWPERALGMVFGDPSRLWEYDPGDPASNKRRR*
Ga0066683_103690853	3300005172	Soil	GLAFILVPLMALLLSYFEIWPERALGAVFGDPSRLYEYDPDNPASSRRRR*
Ga0066683_104487242	3300005172	Soil	AMFIMAAHGLAFILVPLMALLLSYLEIWPERVLGAVFGDPSRLWEYDPGDPTAGRRRR*
Ga0066679_103008951	3300005176	Soil	AHGLYVVLVPLMALVLSYLEIWPERALGAVFGDPSRLWEYDPGDPASDRRKR*
Ga0066388_1044666983	3300005332	Tropical Forest Soil	VPLMALVLSYLEIWPERALGAVFGDPSRLWEYDPGDPASHRRKR*
Ga0070668_1001663581	3300005347	Switchgrass Rhizosphere	VPLMALVLSYFEIWPERALGAVFGDPSRLYEYDPDDPASRGRRP*
Ga0070694_1016755332	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	VPLMALVLSYFEIWPERALGAVFGDPSRLYEYDPDDPASSRRRH*
Ga0066689_109218802	3300005447	Soil	MMAAHGLAFILVPLMALLLSYFEIWPERVLGAVFGDPSRLYEYDPDDPASSRRRR*
Ga0070697_1010364222	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	HGLAFILVPLMALLLSYFEIWPERALGAVFGDASRLYEYDPDNPASSRGRH*
Ga0066701_108074832	3300005552	Soil	ALLLSYFEIWPERALGAVFGDPARLYEYDPENPASSRRRH*
Ga0066695_106709701	3300005553	Soil	VPLMALLLSYLEIWPERALGAVFGDPSRLYEYDPDDPKSSRHRR*
Ga0066704_100185791	3300005557	Soil	LSYFEIWPERALGAVFGDPSRLYEYDPDNPASSRRRR*
Ga0066700_104268771	3300005559	Soil	VPLMALLLSYFEIWPERALGAVFGDPSRLYEYDPDDPTSTRRRR*
Ga0066702_107152012	3300005575	Soil	FILVPLMALLLSYFEIWPERVLGAVFGDPSRLYEYDPDDPATKRRRR*
Ga0066691_108928261	3300005586	Soil	SYFEIWPERALGAVFGDPSRLYEYDPDNRSSKRRRP*
Ga0066706_100853033	3300005598	Soil	LLSYFEIWPERVLGAVFGDPSRLYEYDPDDPASSRRRR*
Ga0066706_101123401	3300005598	Soil	LAFILVPLMALLLSYFEIWPERALGAVFGDPARLYEYNPENPGSSGSRH*
Ga0066706_102697095	3300005598	Soil	MALVLSYLEIWPERALGAVFGDPSRLWEYDPADPASDRRKR*
Ga0066656_103528352	3300006034	Soil	LSYFEIWPERALGAVFGDPSRLYEYDPDDPTSSRRRR*
Ga0066665_100725294	3300006796	Soil	MALLLSYFEIWPERALGAVFGDPARLYAYDPDNPASSRRRH*
Ga0066665_104797122	3300006796	Soil	MAMFIMAAHGLAFILVPLMALLLSYFEIWPERALGAVFGDPSRLWEYDPDDPASSRRKR*
Ga0099791_104841782	3300007255	Vadose Zone Soil	LMALLLSYFEIWPERALGAVFGDPSRLYEYDPDNPASSRRRR*
Ga0099791_105194641	3300007255	Vadose Zone Soil	LLLSYFEIWPERALGAVFGDASRLYEYDPDNPASSRRRH*
Ga0066710_1025673512	3300009012	Grasslands Soil	MFMMAAHGLAFILVPLMALLLSYFEIWPERALGAVFGDPSRLYEYDLDDPASRRRRR
Ga0066710_1044782681	3300009012	Grasslands Soil	AFILVPLMALLLSYFEIWPERVLGAVFGDPSRLYEYDPDDPASSRRRR
Ga0099827_101772712	3300009090	Vadose Zone Soil	LAFILVPLMALLLSYLEIWPERVLGAVFGDPSRLYEYDPDDPASSRSRR*
Ga0099827_116736202	3300009090	Vadose Zone Soil	LVPLMALLLTYLEIWPERALGMVFGDPSRLWEYDPGDPASNKRLR*
Ga0066709_1021929912	3300009137	Grasslands Soil	HGLAFILVPLMALLLSYLEIWPERALGAVFGDPSRLYEYDPDGSTSSRRRR*
Ga0066709_1023215072	3300009137	Grasslands Soil	MFMMAAHGLAFILVPLMALLLSYFEIWPERALGAVFGDPSRLYEYDLDDPASRRRRR*
Ga0066709_1038181581	3300009137	Grasslands Soil	HGLAFILVPLMALLLSYFEIWPERALGAVFGDPSRLYEYDPDDPTSSRRRR*
Ga0134070_102430071	3300010301	Grasslands Soil	MFMMATHGLAFILVPLMALLLGYLEIWPERALAAVFGDPSRLYEYDPDDPKSSRHRR*
Ga0134082_102963363	3300010303	Grasslands Soil	ILVPLMSLLLSYLEIWPERALGAVFGDASRLWEYDPDDPASHRRKR*
Ga0134067_101003493	3300010321	Grasslands Soil	HGLYVVLVPLMALVLSYLEIWPERALGAVFGDPSRLWEYDPADPASDRRKR*
Ga0134084_101609801	3300010322	Grasslands Soil	MAAHGLAFILVPLMALLLSYFEIWPDRALGAVFGDPSRLYEYDPDNSGSSRRRH*
Ga0134064_104436412	3300010325	Grasslands Soil	MALLLSYFEIWPDRALGAVFGDPSRLYEHDPDNSTSSRRRH*
Ga0134063_100459172	3300010335	Grasslands Soil	PLMALLLSYFEIWPERALGAVFGDPSRLYEYDPDDPASGRRRR*
Ga0134063_104948161	3300010335	Grasslands Soil	GLYFILVPLMSLLLSYLEIWPERALGAVFSDASRLWEYDPDDPASHRRKR*
Ga0126376_127490232	3300010359	Tropical Forest Soil	ILVPLMALLLSYFEIWPERVLGAVFGDPSKLYEYDPENPSSSRRRR*
Ga0126377_115391381	3300010362	Tropical Forest Soil	HGLYFILVPLMALLLSYLEIWPERALGAVFGDPSRLWEYDPGHPGSSRRKR*
Ga0134066_103883852	3300010364	Grasslands Soil	FILVPLIALLLSYFEILPDRALGAVFGDPSRLYEYDPDNSASSRRRH*
Ga0134128_123836222	3300010373	Terrestrial Soil	VPLMALLLSYFEIWPERALGAVFGDPSRLYEYDPDNPASKRRRH*
Ga0120139_10385243	3300012019	Permafrost	MAMFVMAAHGLALILVPLLALLLSYLEIWPERALGAVFGDPSRLYEYDPDDPASSRRRR*
Ga0137364_108903122	3300012198	Vadose Zone Soil	RMALLLSYFEIWPEGVLGAVFGDPSRLYEYDPDNPTSSRRRR*
Ga0137383_109666632	3300012199	Vadose Zone Soil	LVPLMALLLSYLEIWPERALGAVFGDPSRLYEYDPDDPKSSRHRR*
Ga0137382_102802411	3300012200	Vadose Zone Soil	MFIMAAHSLVFILVPLLALLLSYFEIWPERVLGAVFGDPSRLYEYDPDDPAAGWRRR*
Ga0137399_117643942	3300012203	Vadose Zone Soil	LSYFEIWPERALGAVFGDPSRLYEYDPDNPGSRRHRP*
Ga0137374_104507763	3300012204	Vadose Zone Soil	PLLALLLSYFEIWPERALGAVFGDPSRLYEYDPEDDPASNRRRR*
Ga0137381_111356951	3300012207	Vadose Zone Soil	GLAFILVPLLALLLSYFEIWPERALGAVFGDPSRLYEYDPDDPASSRRRR*
Ga0137376_100262567	3300012208	Vadose Zone Soil	MALVLSYLEIWPERALGAVFGDPSRLYEYDPGDPASSRRRR*
Ga0137377_107660142	3300012211	Vadose Zone Soil	LLSYLEIWPERALGAVFGDPSRLYEYDPDDPKSRGRRR*
Ga0137370_104798211	3300012285	Vadose Zone Soil	LSYFEIWPERALGAVFGDPARLYEYDPDNPKSSGSRH*
Ga0137370_105808511	3300012285	Vadose Zone Soil	LSYFEIWPERALGAVFGDPARLYEYDPENPASSRRRH*
Ga0137367_110032201	3300012353	Vadose Zone Soil	LSYFEIWPERALGAVFGDPSRLYEYDPEDAASNRRRR*
Ga0137366_100200581	3300012354	Vadose Zone Soil	IAMFIMAAHGLAFILVPLMALLLSYLEIWPERALGAVFGDPSRLYEYDPDDPASN*
Ga0137366_103989011	3300012354	Vadose Zone Soil	LAFILVPLMALLLSYFEIWPERVLGAVFGDPSRLYEYDPDDPASSRRRR*
Ga0137371_105953442	3300012356	Vadose Zone Soil	ALLLSYLEIWPERALGAVFGDPSRLYEYDPDGSTSSRRRR*
Ga0137371_106045612	3300012356	Vadose Zone Soil	VPLMALLLTYLEIWPERALGMVFGDPSRLWEYDPGDPASNKRRR*
Ga0137371_109182661	3300012356	Vadose Zone Soil	FVLVPLMALLLSYLEIWPERALGAVFGDPSRLYEYDPDDPKSSRHRR*
Ga0137375_105868091	3300012360	Vadose Zone Soil	AFILVPLMALLLSYFEIWPERALGAVFGDPSRLYEYDPDDPASRRRRP*
Ga0137359_106459752	3300012923	Vadose Zone Soil	PLMALLLSYLEIWPERALGAVFGDPSRLYEYDPDDPASSRLQR*
Ga0134087_104270212	3300012977	Grasslands Soil	AHGLAFILVPLMALLLSYFEIWPDRALGAVFGDPSRLYEYDPENSASSRR*
Ga0134087_105874101	3300012977	Grasslands Soil	YFILVPLMALLLSYLEIWPERALGAVFGDASRLWEYDPDDPASHRRKR*
Ga0163162_125058161	3300013306	Switchgrass Rhizosphere	MAAHGLAFILVPLMALLLSYFEIWPERALGAVFGDPSRLYEYDPDNPASKRRRH*
Ga0157375_105677593	3300013308	Miscanthus Rhizosphere	LLLSYFEIWPERALGAVFGDPSRLYEYDPDNPASRRRRH*
Ga0134081_100040965	3300014150	Grasslands Soil	FILVPLMALLLSYFEIWPERVLGAVFGDPSRLYEYDPDNPASSRHRR*
Ga0134078_103813982	3300014157	Grasslands Soil	PLMALLLSYLEIWPERALGAVFGDPSRLGEYDPGDSTSGRRRR*
Ga0134078_105708572	3300014157	Grasslands Soil	MVAHGLAFILVPLMALLLSYFEIWPERALGAVFGDPARLYEYDPDNPKSSGSRH*
Ga0134079_105760472	3300014166	Grasslands Soil	AAHGLAFVLVPLMALLMSYLEIWPERALGAVFGDPSRLYEYDPDDPKSSRHRR*
Ga0163163_110887182	3300014325	Switchgrass Rhizosphere	MFIMAAHGLAFILVPLMALLLSYFEIWPERALGAVFGDPSRLYEYDPDNPASKRRRH*
Ga0134073_100678402	3300015356	Grasslands Soil	SYLEIWPERALGAVFGDPSRLYKYDPDDPASNRRRR*
Ga0134089_104517841	3300015358	Grasslands Soil	ASPSFWCRCLALLLSYFEIWPERALGAVFGDPSRLYEYDPDDPTSSRRRR*
Ga0134085_101675152	3300015359	Grasslands Soil	VPLMALLLSYFEIWPERVLGAVFGDPSRLYEYDPDNPASSRHRR*
Ga0132256_1021572392	3300015372	Arabidopsis Rhizosphere	MAAHGLAFILVPLMALLLSYFEIWPERALGAVFGDPSRLYEYDPDNPASSRRRR*
Ga0184608_101572443	3300018028	Groundwater Sediment	MFIMAAHGLAFILVPLLALLLSYFEIWPERALGAVFGDPSRLYEYDPEDPASSRRRR
Ga0184608_102017392	3300018028	Groundwater Sediment	MAMFVMAAHGLAFILVPLLALLLSYFEIWPERALGAVFGDPSRLYEYDPDDPASSRRRR
Ga0184632_101989672	3300018075	Groundwater Sediment	AFILVPLMALLLSYFEIWPERALGAVFGDPSRLYEYDPDDPASKRRRR
Ga0066655_109719431	3300018431	Grasslands Soil	ILVPLMALLLSYFEIWPERALGAVFGDPSRLYEYDPDDPASGRRRR
Ga0066667_101258314	3300018433	Grasslands Soil	FILVPLMALLLSYFEIWPERVLGAVFGDPSRLYEHDPDDPASKRRRR
Ga0066667_102249891	3300018433	Grasslands Soil	MAAHGLYVVLVPLMALVLSYLEIWPERALGAVFGDPSRLWEYDPGDPASDRRKR
Ga0066669_116864241	3300018482	Grasslands Soil	MAAHGLAFILVPLMALLLSDLEIWPERALGAVFGDPSRLWEYDPDDPTSSRRRR
Ga0173482_103679082	3300019361	Soil	LAFILVPLMALLLSYFEIWPERALGAVFGDPSRLYEYDPDNPASSRRRH
Ga0173479_105046781	3300019362	Soil	HGLAFILVPLMALLLSYFEIWPERALGAVFGDPSRLYEYDPDDPASSRRRH
Ga0193701_10369453	3300019875	Soil	YLEIWPERALGAVFGDPSRLYEYDPDDPASNRRRR
Ga0193747_10621572	3300019885	Soil	MALLLSYFEIWPERALGAVFGDPSRLYEYDPDNPASKRRRH
Ga0193727_10427853	3300019886	Soil	FILVPLLALLLSYFEIWPERALGAVFGDPSRLYEYDPEDPASNRRRR
Ga0193755_10976211	3300020004	Soil	IAMFIMAAHGLAFILVPLMALLLSYFEIWPERALGAVFGDPSRLYEYDPDNPASSRRRH
Ga0193735_11379722	3300020006	Soil	MFIMAAHGLAFILVPLMALLLSYFEIWPERALGAVFGDPSRLYEYNPDNSASTRRRR
Ga0193752_11135121	3300020027	Soil	GLAFVIVPLMAVLLSYFEIWPERVLGATFGDPARLYEFDPEDTSRKRRRPGSTDL
Ga0179594_103745511	3300020170	Vadose Zone Soil	LLLSYLEIWPARALGAVFGDPSRLYEYDPDNPASSRRRR
Ga0193750_10598431	3300021413	Soil	VPLMALLLSYLEIWPERALGAVFGDPSRLYEYDPDDPTSSRRRH
Ga0222623_101108761	3300022694	Groundwater Sediment	AHGLAFILVPLLALLLSYFEIWPERALGAVFGDPSRLHEYDPDDPASSRRRR
Ga0193714_10401101	3300023058	Soil	VPLMALLLSYLEIWPERALGAVFGDPSRLYEYDQDNPASNRRRR
Ga0207709_100488255	3300025935	Miscanthus Rhizosphere	YFEIWPERALGAVFGDPSRLYEYDPDDPASSRRRP
Ga0207670_105354552	3300025936	Switchgrass Rhizosphere	LMALLLSYFEIWPERALGAVFGDPSRLYEYDPDNPASSRRRP
Ga0207689_117398382	3300025942	Miscanthus Rhizosphere	ILVPLMALLLSYFEIWPERALGAVFGDPSRLYEYDPDNPASKRRRH
Ga0209350_11056511	3300026277	Grasslands Soil	LAMFIMAAHGLAFILVPLMALLLSYFEIWPERALGAVFGDPARLYEYDPENPASSRRRH
Ga0209055_11645261	3300026309	Soil	LAFILVPLMALLLSYLEIWPERALGAVFGDPSRLWEYDPGDPTSNRRRR
Ga0209239_11790442	3300026310	Grasslands Soil	YFVLVPLMALLLTYLEIWPERALGMVFGDPSRLWEYDPGDPASNKRRR
Ga0209686_11290841	3300026315	Soil	AHGLAFILVPLMALLLSYFEIWPERVLGAVFGDPSRLYEYDPDDPATKRRRR
Ga0209152_102555812	3300026325	Soil	LYFILVPLMALLLTYLEIWPERALGMVFGDPSRLWEYDPGDPASNKRRR
Ga0209801_11351052	3300026326	Soil	MFMMAAHGLAFILVPLMALLLSYLEIWPERALGAVFGDPSRLYAYDPDNPKSSRHRR
Ga0209801_11714193	3300026326	Soil	LYVVLVPLMALVLSYLEIWPERALGAVFGDPSRLWEYDPGDPASDRRKR
Ga0209801_11944102	3300026326	Soil	AAHGLAFILVPLMALLLSYFEIWPERVLGAVFGDPARLYEYDPDDPASSRRRR
Ga0209266_12590442	3300026327	Soil	SYLEIWPERALGAVFGDPSRLYEYDPGGSPSSRRRR
Ga0209267_10871421	3300026331	Soil	IMAAHGLAFILVPLMALLLSYLEIWPERALGAVFGDPSRLWEYDPGDPTSNRRRR
Ga0209690_13003791	3300026524	Soil	SYFEIWPERVLGAVFGDPARLYEYDPDDPASSRRRR
Ga0209058_11169481	3300026536	Soil	GLLLSYFEIWPERALGAVFGDPARLYAYDPDNPASSRRRH
Ga0209157_13805422	3300026537	Soil	AFILVPLMALLLSYFEIWPERALGAVFGDPARLYAYDPDNPASSRRRH
Ga0209056_107091462	3300026538	Soil	GLAFILVPLMALLLSYFEIWPERVLGAVFGDPSRLYEYDPDDPASSRRRR
Ga0209376_14054322	3300026540	Soil	PLMALLLSYFEIWPERALGAIFGDPARLYEYDPDNPKSSCSRH
Ga0209156_104477862	3300026547	Soil	FIMAAHGLAFILVPLMALLLSYFEIWPERMLGAVFGDPSRLYEHDPDDPASKRRRR
Ga0209488_109513211	3300027903	Vadose Zone Soil	MAMFIMAAHGLAFILVPLMALLLSYFEIWPERALGAVFGDPSRLYEYDPDNPASSRRRH
Ga0307313_102760632	3300028715	Soil	HGLAFILVPLMALLLSYLEIWPERALGAVFGDPSRLYEYDPDDPASNRRRR
Ga0307287_102692921	3300028796	Soil	HGLAFILVPLMALLLSYLEIWPERALGAVFGDPSRLYEYDPDNPKSSRR
Ga0307312_110079771	3300028828	Soil	AMFIMAAHGLAFILVPLMALLLSYFEIWPERALGAVFGDPSRLYEYNPDNSASTRRRR
Ga0307304_105262041	3300028885	Soil	LSYFEIWPERALGAVFGDPSRLYEYDPDNPASSRRRH
Ga0075386_121845502	3300030916	Soil	PIALLVSYFEIWTDRLLGVVFGDPLRLYEYDPDNPASSRRRR
Ga0170824_1006090421	3300031231	Forest Soil	FILVPLMALLLSYLEIWPERALGAVFGDPSRLYEYDPDNPASSRRRH
Ga0170824_1031727241	3300031231	Forest Soil	ILVPLMALLLSYLEIWPEGALGAVFGDPSRLYGYDPDDPKSSRN
Ga0170824_1050672931	3300031231	Forest Soil	MAANGLAFILVPPMALLVSYFEIWPDRLLGVVFGVPLCLYEYDPDNPASSRRRR
Ga0170824_1144341252	3300031231	Forest Soil	FIMAAHGLAFILVPLMALLVSYFETWPDRAVGAVFGDPLRLYEYDPDNPASSRRRR
Ga0307469_116746981	3300031720	Hardwood Forest Soil	AFILVPLMALLLSYFEIWPERALGAVFGDASRLYEYDPDNPASS
Ga0307469_124376071	3300031720	Hardwood Forest Soil	AFILVPLMALLLSYFEIWPERALGAVFGDPSRLYEYDPDNSVSTRRRR
Ga0306918_101419552	3300031744	Soil	MGLAFILVPLMALLLSYLEIWPERALGAVFGDPSRLYEYDPDNPASRPRRR
Ga0310912_106611561	3300031941	Soil	VPLMALLLTYLEIWPERALGMVFGDPSRLWEYDPGEPASNKRRR
Ga0310916_101510224	3300031942	Soil	MGLAFILVPLMALLLSYLEIWPERALGAVFGDPSRLYEYDPDNPASRPRR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F059813

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences