Metagenome / Metatranscriptome Family F059689

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F059689
Family Type	Metagenome / Metatranscriptome
Number of Sequences	133
Average Sequence Length	118 residues
Representative Sequence	PIAYSIDHENGCVIENWTGDITKRVLTVHFRRFFTDPEVLALGRTLVDLRHCQFVLTAAELTELVSRIVMPALSGRRWRTAIVLGDTNHFEMWRQYHVFAESYSNDSVFSTPEAALAWLRSQRPT
Number of Associated Samples	103
Number of Associated Scaffolds	133

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	73.95 %
% of genes near scaffold ends (potentially truncated)	47.37 %
% of genes from short scaffolds (< 2000 bps)	78.95 %
Associated GOLD sequencing projects	85
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (56.391 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere (10.526 % of family members)
Environment Ontology (ENVO)	Unclassified (57.895 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (76.692 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 45.60% β-sheet: 22.40% Coil/Unstructured: 32.00%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 133 Family Scaffolds
PF00534	Glycos_transf_1	18.80
PF09948	DUF2182	14.29
PF05988	DUF899	4.51
PF13692	Glyco_trans_1_4	0.75
PF02633	Creatininase	0.75
PF13641	Glyco_tranf_2_3	0.75
PF00221	Lyase_aromatic	0.75
PF13360	PQQ_2	0.75

COG ID	Name	Functional Category	% Frequency in 133 Family Scaffolds
COG4312	Predicted dithiol-disulfide oxidoreductase, DUF899 family	General function prediction only [R]	4.51
COG1402	Creatinine amidohydrolase/Fe(II)-dependent FAPy formamide hydrolase (riboflavin and F420 biosynthesis)	Coenzyme transport and metabolism [H]	0.75
COG2986	Histidine ammonia-lyase	Amino acid transport and metabolism [E]	0.75

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.39 %
All Organisms	root	All Organisms	43.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.39 %
cellular organisms	root	All Organisms → cellular organisms	43.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.39 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	43.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.39 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	21.05 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	6.77 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	3.76 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.39 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	21.05 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	2.26 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.75 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.75 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.75 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.75 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.75 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.39 %
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	21.05 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	2.26 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.75 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.75 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.75 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.75 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.75 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.39 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	21.05 %
Nostocales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales	1.50 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.75 %
Desulfuromonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales	0.75 %
Hyphomicrobiales incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis	0.75 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.75 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.75 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.39 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	21.05 %
Nostocales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales	1.50 %
Geobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae	0.75 %
Enhydrobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Enhydrobacter	0.75 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.75 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.75 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.75 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.39 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	21.05 %
Nostocales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales	1.50 %
Enhydrobacter aerosaccus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Enhydrobacter → Enhydrobacter aerosaccus	0.75 %
Geomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → Geomonas	0.75 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.75 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.75 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.75 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.39 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	21.05 %
Nostocales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales	1.50 %
Geomonas limicola	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → Geomonas → Geomonas limicola	0.75 %
Enhydrobacter aerosaccus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Enhydrobacter → Enhydrobacter aerosaccus	0.75 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.75 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.75 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.75 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.75 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001990\|JGI24737J22298_10120201	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	776	Open in IMG/M
3300004157\|Ga0062590_102193045	Not Available	578	Open in IMG/M
3300005093\|Ga0062594_100854237	Not Available	851	Open in IMG/M
3300005186\|Ga0066676_10197185	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1292	Open in IMG/M
3300005327\|Ga0070658_10037015	All Organisms → cellular organisms → Bacteria	3932	Open in IMG/M
3300005327\|Ga0070658_10467179	Not Available	1088	Open in IMG/M
3300005327\|Ga0070658_10829188	Not Available	804	Open in IMG/M
3300005327\|Ga0070658_11069573	All Organisms → cellular organisms → Bacteria → Proteobacteria	702	Open in IMG/M
3300005329\|Ga0070683_100087164	All Organisms → cellular organisms → Bacteria	2927	Open in IMG/M
3300005329\|Ga0070683_102119555	Not Available	540	Open in IMG/M
3300005330\|Ga0070690_101766575	Not Available	504	Open in IMG/M
3300005331\|Ga0070670_100671766	Not Available	930	Open in IMG/M
3300005339\|Ga0070660_101684756	Not Available	540	Open in IMG/M
3300005344\|Ga0070661_101383470	Not Available	592	Open in IMG/M
3300005345\|Ga0070692_10263437	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1037	Open in IMG/M
3300005354\|Ga0070675_100510420	Not Available	1084	Open in IMG/M
3300005355\|Ga0070671_100031129	All Organisms → cellular organisms → Bacteria	4406	Open in IMG/M
3300005355\|Ga0070671_100665814	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	902	Open in IMG/M
3300005356\|Ga0070674_101477744	Not Available	610	Open in IMG/M
3300005364\|Ga0070673_101321434	Not Available	677	Open in IMG/M
3300005364\|Ga0070673_101676180	Not Available	601	Open in IMG/M
3300005367\|Ga0070667_100729104	All Organisms → cellular organisms → Bacteria → Proteobacteria	918	Open in IMG/M
3300005436\|Ga0070713_101033213	Not Available	793	Open in IMG/M
3300005437\|Ga0070710_10457594	Not Available	866	Open in IMG/M
3300005437\|Ga0070710_11135204	Not Available	575	Open in IMG/M
3300005441\|Ga0070700_100337216	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1113	Open in IMG/M
3300005535\|Ga0070684_100323961	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1416	Open in IMG/M
3300005539\|Ga0068853_102092840	Not Available	549	Open in IMG/M
3300005543\|Ga0070672_100649118	Not Available	922	Open in IMG/M
3300005547\|Ga0070693_101595972	Not Available	512	Open in IMG/M
3300005560\|Ga0066670_10755303	Not Available	589	Open in IMG/M
3300005563\|Ga0068855_101918574	Not Available	600	Open in IMG/M
3300005616\|Ga0068852_100493131	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1219	Open in IMG/M
3300005616\|Ga0068852_101560618	Not Available	683	Open in IMG/M
3300005618\|Ga0068864_101756959	Not Available	625	Open in IMG/M
3300005719\|Ga0068861_102022135	Not Available	575	Open in IMG/M
3300005834\|Ga0068851_10532958	Not Available	708	Open in IMG/M
3300005841\|Ga0068863_101553578	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	671	Open in IMG/M
3300005842\|Ga0068858_100180894	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	1991	Open in IMG/M
3300006953\|Ga0074063_12670940	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	591	Open in IMG/M
3300006954\|Ga0079219_11125053	All Organisms → cellular organisms → Bacteria	669	Open in IMG/M
3300009011\|Ga0105251_10633347	Not Available	510	Open in IMG/M
3300009137\|Ga0066709_100776095	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1386	Open in IMG/M
3300009551\|Ga0105238_12312024	Not Available	573	Open in IMG/M
3300009553\|Ga0105249_12743775	Not Available	564	Open in IMG/M
3300010397\|Ga0134124_12043815	Not Available	611	Open in IMG/M
3300010400\|Ga0134122_11086132	Not Available	791	Open in IMG/M
3300012469\|Ga0150984_102572494	Not Available	1104	Open in IMG/M
3300012951\|Ga0164300_10171571	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1037	Open in IMG/M
3300012955\|Ga0164298_10347904	Not Available	938	Open in IMG/M
3300012955\|Ga0164298_10654507	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	730	Open in IMG/M
3300012957\|Ga0164303_10076327	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1583	Open in IMG/M
3300012958\|Ga0164299_10059867	All Organisms → cellular organisms → Bacteria	1822	Open in IMG/M
3300012960\|Ga0164301_10281836	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1109	Open in IMG/M
3300012961\|Ga0164302_10769800	Not Available	722	Open in IMG/M
3300012961\|Ga0164302_11458007	Not Available	562	Open in IMG/M
3300012985\|Ga0164308_12018784	Not Available	538	Open in IMG/M
3300012986\|Ga0164304_10025975	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2920	Open in IMG/M
3300012986\|Ga0164304_11090847	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Enhydrobacter → Enhydrobacter aerosaccus	638	Open in IMG/M
3300012987\|Ga0164307_10150119	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1533	Open in IMG/M
3300012988\|Ga0164306_11573758	Not Available	566	Open in IMG/M
3300013100\|Ga0157373_10528498	Not Available	854	Open in IMG/M
3300013102\|Ga0157371_10158198	All Organisms → cellular organisms → Bacteria	1618	Open in IMG/M
3300013104\|Ga0157370_11936332	Not Available	529	Open in IMG/M
3300013105\|Ga0157369_11325050	Not Available	734	Open in IMG/M
3300013105\|Ga0157369_11458297	Not Available	696	Open in IMG/M
3300013105\|Ga0157369_12085218	Not Available	575	Open in IMG/M
3300013307\|Ga0157372_10755412	Not Available	1131	Open in IMG/M
3300014325\|Ga0163163_10433600	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	1373	Open in IMG/M
3300015356\|Ga0134073_10212892	Not Available	648	Open in IMG/M
3300015371\|Ga0132258_10083071	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales	7476	Open in IMG/M
3300015371\|Ga0132258_10418328	All Organisms → cellular organisms → Bacteria → Proteobacteria	3334	Open in IMG/M
3300015371\|Ga0132258_11136512	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1974	Open in IMG/M
3300015373\|Ga0132257_101785641	Not Available	790	Open in IMG/M
3300015373\|Ga0132257_102108530	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	728	Open in IMG/M
3300015374\|Ga0132255_101236934	All Organisms → cellular organisms → Bacteria	1125	Open in IMG/M
3300017792\|Ga0163161_10483041	Not Available	1006	Open in IMG/M
3300021445\|Ga0182009_10030056	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales	2159	Open in IMG/M
3300021445\|Ga0182009_10600219	Not Available	589	Open in IMG/M
3300025315\|Ga0207697_10216698	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	844	Open in IMG/M
3300025321\|Ga0207656_10019167	All Organisms → cellular organisms → Bacteria → Proteobacteria	2704	Open in IMG/M
3300025893\|Ga0207682_10150528	Not Available	1049	Open in IMG/M
3300025899\|Ga0207642_10141355	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1270	Open in IMG/M
3300025903\|Ga0207680_10645366	Not Available	758	Open in IMG/M
3300025904\|Ga0207647_10350206	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → Geomonas → Geomonas limicola	836	Open in IMG/M
3300025907\|Ga0207645_10014208	All Organisms → cellular organisms → Bacteria → Proteobacteria	5332	Open in IMG/M
3300025907\|Ga0207645_10122909	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1686	Open in IMG/M
3300025907\|Ga0207645_10742316	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	667	Open in IMG/M
3300025907\|Ga0207645_11180646	Not Available	514	Open in IMG/M
3300025909\|Ga0207705_11108813	All Organisms → cellular organisms → Bacteria	609	Open in IMG/M
3300025919\|Ga0207657_10060128	All Organisms → cellular organisms → Bacteria	3262	Open in IMG/M
3300025920\|Ga0207649_10494526	Not Available	929	Open in IMG/M
3300025924\|Ga0207694_11500587	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	569	Open in IMG/M
3300025925\|Ga0207650_10966320	All Organisms → cellular organisms → Bacteria	724	Open in IMG/M
3300025930\|Ga0207701_10357457	All Organisms → cellular organisms → Bacteria	1262	Open in IMG/M
3300025930\|Ga0207701_10464941	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1085	Open in IMG/M
3300025931\|Ga0207644_10103077	All Organisms → cellular organisms → Bacteria	2147	Open in IMG/M
3300025933\|Ga0207706_10677747	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	882	Open in IMG/M
3300025934\|Ga0207686_10275278	Not Available	1240	Open in IMG/M
3300025937\|Ga0207669_11590080	Not Available	558	Open in IMG/M
3300025940\|Ga0207691_10023667	All Organisms → cellular organisms → Bacteria	5782	Open in IMG/M
3300025940\|Ga0207691_10142909	All Organisms → cellular organisms → Bacteria	2108	Open in IMG/M
3300025941\|Ga0207711_11598116	Not Available	595	Open in IMG/M
3300025944\|Ga0207661_10728899	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	912	Open in IMG/M
3300025960\|Ga0207651_11294409	Not Available	655	Open in IMG/M
3300025986\|Ga0207658_10827035	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	841	Open in IMG/M
3300026023\|Ga0207677_10597529	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	968	Open in IMG/M
3300026035\|Ga0207703_11884202	Not Available	574	Open in IMG/M
3300026041\|Ga0207639_12079348	Not Available	529	Open in IMG/M
3300026067\|Ga0207678_11117486	Not Available	698	Open in IMG/M
3300026067\|Ga0207678_11186795	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	676	Open in IMG/M
3300026078\|Ga0207702_11789965	Not Available	606	Open in IMG/M
3300026095\|Ga0207676_10990720	Not Available	828	Open in IMG/M
3300030496\|Ga0268240_10121864	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	625	Open in IMG/M
3300031938\|Ga0308175_100066078	All Organisms → cellular organisms → Bacteria → Proteobacteria	3198	Open in IMG/M
3300031938\|Ga0308175_100344190	All Organisms → cellular organisms → Bacteria	1538	Open in IMG/M
3300031938\|Ga0308175_101909676	Not Available	665	Open in IMG/M
3300031996\|Ga0308176_10690018	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1058	Open in IMG/M
3300032074\|Ga0308173_11766686	Not Available	583	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	64.66%
Environmental	Environmental	35.34%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	64.66%
Terrestrial	Environmental → Terrestrial	35.34%

Habitat	Taxonomy	Distribution
Rhizosphere	Host-Associated → Plants → Rhizosphere	38.35%
Soil	Environmental → Terrestrial → Soil	35.34%
Rhizoplane	Host-Associated → Plants → Rhizoplane	25.56%
Roots	Host-Associated → Plants → Roots	0.75%

Habitat	Taxonomy	Distribution
Soil	Host-Associated → Plants → Rhizosphere → Soil	27.82%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	26.32%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	21.05%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	10.53%
Loam	Environmental → Terrestrial → Soil → Loam	9.02%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	4.51%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.75%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	27.82%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	21.05%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	15.79%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	10.53%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	9.02%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	4.51%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	4.51%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.76%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.26%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.75%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	10.53%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	10.53%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	9.77%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	9.02%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	8.27%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	6.02%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.26%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	5.26%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	4.51%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	4.51%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.01%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	3.01%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.26%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.26%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.26%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.50%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	1.50%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.50%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.75%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.75%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.75%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.75%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.75%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.75%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.75%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.75%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001990	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3	Host-Associated	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005327	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG	Host-Associated	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005834	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2	Host-Associated	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300006953	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009011	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300013100	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG	Host-Associated	Open in IMG/M
3300013102	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG	Host-Associated	Open in IMG/M
3300013104	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG	Host-Associated	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300015356	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300021445	Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaG	Environmental	Open in IMG/M
3300025315	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Host-Associated	Open in IMG/M
3300025321	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025893	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025904	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes)	Host-Associated	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025909	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025924	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300030496	Bulk soil microbial communities from Mexico - Penjamo (Pe) metaG (v2)	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300031996	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2	Environmental	Open in IMG/M
3300032074	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R1	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI24737J22298_101202012	3300001990	Corn Rhizosphere	VPIAYSIDHENGCVIENWTGDITKRVLTVHFRRFFSDPEVLALGRTLVDLRHCQLVVTAPELSELVKRIVMPALHGRTWRTAIVLGDTNHFEMWRQYHVFAESYSNDSVFSTPEAALAWLRSQR
Ga0062590_1021930452	3300004157	Soil	MPISYAIDRENGCIVETWTGDVTAKELAAHWRRYLADPEVLALRRTLVDLRHCRILFSAAELSQLVERLVLPALHGMNWRTAIVVGDPNHFEISRQYHVVAESYSQDSVFSTPEAALTWLRTQRQP*
Ga0062594_1008542372	3300005093	Soil	VPIAYSIDHENGCVIEHWTGDITKHVLAVHFRRFFTDPEVLALGRTLVDLRHCQFVLTAAELTELVSRIVMPALSGRRWRTAIVLGDTNHFEMWRQYHVFAESYSNDSVFSTPEAALAWLRSQRPT*
Ga0066676_101971852	3300005186	Soil	VPIAYSIDRENGCIVETWTGDVTAKELAMHWRRYLSDPDVLALRRTLVDLRNCRIAFTAAELSQLVERIVLPALHGMNWRTAIVLGEPNHFEISRQYHAIAESYSQDSVFSTSEAALAWLHTQRPT*
Ga0070658_100370152	3300005327	Corn Rhizosphere	VPIAYSIDHENGCVIENWTGDITKRVLTVHFRRFFSDPEVLALGRTLVDLRHCQLVVTAPELSELVKRIVMPALHGRTWRTAIVLGDTNHFEMWRQYHVFAESYSNDSVFSTPEAALAWLRSQRPT*
Ga0070658_104671792	3300005327	Corn Rhizosphere	ENGCILETWTGDVTARELMAHWRRYLADPDVLALRRTLVDLRHCHILFTAAELSEMVSRIVLPALQGRRWRTAIVLGDPSHFEMSRQYHAFAESYSKDSVFSTPEAALAWLRSQRLQSP*
Ga0070658_108291881	3300005327	Corn Rhizosphere	VPIAYSIDHENGCVIENWTGDITKHVLAVHFRRFFTDPEVLALGRTLVDLRHCQFVLTAAELTELVSRIVMPALSGRRWRTAIVLGDTNHFEMWRQYHVFAESYSNDSVFSTPEAALAWLRSQRPT*
Ga0070658_110695732	3300005327	Corn Rhizosphere	VPITYSIDHENGCVIENWTGDITTRVLTVHFRRFFTDPEVLALGRTLVDLRHCQLVVTAAELSELVTRIVMPALHGRTWRTAIVLGDTNHFEMWRHYHVFAESYSNDSVFSSCEGALAWLRSQRPT*
Ga0070683_1000871642	3300005329	Corn Rhizosphere	VPIAYSIDRENGCILETWTGDVTARELMAHWRRYLADPDVLALRRTLVDLRHCHILFTAAELSEMVSRIVLPALQGRRWRTAIVLGDPSHFEMSRQYHAFAESYSKDSVFSTPEAALAWLRSQRLQSP*
Ga0070683_1021195551	3300005329	Corn Rhizosphere	VPIAYSIDRENGCVVETWTGDITARDLTTHFRRFFADPQVLELRRSMVDLRHCRLVFTAAELSEIVSRIIMPALHGQRWRSAIVLGDPSHFEMSRQYHIFAASYSKDSVFSTPEAALAWLRS
Ga0070690_1017665751	3300005330	Switchgrass Rhizosphere	VPIAYSIDKENGCVVETWTGDITARDLTTHFRRFFADPEVLELRRSMVDLRHCRLVFTAAELSEIVSRIIMPALHGQRWRSAIVLGDPSHFEMSRQYHIFAASYSKDSVFSTPEAALAWLRSQRPT*
Ga0070670_1006717662	3300005331	Switchgrass Rhizosphere	CILETWTGDVTARELMAHWRRYLADPDVLALRRTLVDLRHCHILFTAAELSEMVSRIVLPALQGRRWRTAIVLGDPSHFEMSRQYHAFAESYSKDSVFSTPEAALAWLRSQRLQSP*
Ga0070660_1016847561	3300005339	Corn Rhizosphere	VPIAYSIDRENGCVVETWTGDINARDVTTHFRRFFADPEVLELRRSMVDLRHCRLVFTAAELSEIVSRIIMPALHGQRWRSAIVLGDPSHFEMSRQYHIFAASYSKDSVFSTPEAALAWLRSQRP
Ga0070661_1013834701	3300005344	Corn Rhizosphere	MPISYAIDRENGCIVETWTGDVTAKELAAHWRHYLADAEVLALRRTLVDLRNCRIAFTAAELSQLVERLVLPALHGMNWRTAVVVGDPNHFEISRQYHVVAESYSQDSVFSTPEA
Ga0070692_102634372	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	VPIAYSIDKENGCVVETWTGDITARDLTTHFRRFFADPEVLELRRSMVDLRHCRLVFTAAELSEIVSRIIMPALHGQRWRSAIVLGDPSHFEMSRQYHIFAASYSKDSVFSTPEAALAWLRSQRPA*
Ga0070669_1011103511	3300005353	Switchgrass Rhizosphere	EVLALRRTLVDLRHCRILFSAAELSQLVERLVLPALHGMNWRTAIVVGDPNHFEISRQYHVVAESYSQDSVFSTPEAALTWLRTQRQP*
Ga0070675_1005104201	3300005354	Miscanthus Rhizosphere	TAPASPQIAGGRRVPIAYSIDHENGCVIENWTGDITKHVLAVHFRRFFTDPEVLALGRTLVDLRHCQFVLTAAELTELVSRIVMPALSGRRWRTAIVLGDTNHFEMWRQYHVFAESYSNDSVFSTPEAALAWLRSQRPT*
Ga0070671_1000311292	3300005355	Switchgrass Rhizosphere	VPIAYSIDHENGCVIENWTGDITKHVLAVHFRRFFTDPEVLALGRTLVDLRHCQFVLSAAELTELVSRIVMPALSGRRWRTAIVLGDTNHFEMWRQYHVFAESYSNDSVFSTPEAALAWLRSQRPT*
Ga0070671_1006658142	3300005355	Switchgrass Rhizosphere	VPIAYSIDREDGCIIETWTGDVTARELMTHWRRYLADPEVLALRRTLVDLRHCRILFTPAELSELVSRLVLPALHGMNWRTAIVLGDPAHFEMSRQYHAFAASYSQDSVFSTPEAALAWLRSQRVQSP*
Ga0070674_1014777442	3300005356	Miscanthus Rhizosphere	VPIAYSIDKENGCVVETWTGDITARDLTTHFRRFFADPEVLELRRSMVDLRHCRLVFTAAELSEIVSRIIMPALHGQRWRSAIVLGDPSHFEMSRQYHIFAASYSKDSVFS
Ga0070673_1013214341	3300005364	Switchgrass Rhizosphere	MPIAYSIDRENGCIVETWTGDVTAKELAAHWRRYLADPEVLALRRTLVDLRHCRILFSAAELSQLVERLVLPALHGMNWRTAIVVGDPNHFEISRQYHVVAESYSQDSVFSTPEAALTWLRTQRQP*
Ga0070673_1016761801	3300005364	Switchgrass Rhizosphere	VPIAYSIDHENGCVIENWTGDITKHVLAVHFRRFFTDPEVLALGRTLVDLRHCQFALTAAELTELVSRIVMPALSGRRWRTAIVLGDTNHFEMWRQYHVFAESYSNDSVFSTPEAALAWLRSQRPT*
Ga0070667_1007291042	3300005367	Switchgrass Rhizosphere	VPIAYSIDREDGCIIETWTGDVTARELMAHWRRYLADPDVLALRRTLVDLRHCHILFTAAELSEMVSRIVLPALQGRRWRTAIVLGDPSHFEMSRQYHAFAESYSKDSVFSTPEAALAWLRSQRLQSP*
Ga0070713_1010332131	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	VPITYSIDHENGCVIENWTGDITKHVLAVHFRRFFSDPEVLALGRTLVDLRHCQFVLAPAELTELVSRIVMPALSGRRWRTAIVLGDTNHFEMWRQYHVFAESYSNDSVFSTPEAALAWLRSQRPT*
Ga0070710_104575941	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	VPIAYSIDHENGCVIENLTGDITKHVLAVHFRRFFTDPEVLALGRTLVDLRHCQFILTAAELEELVFRIVIPALHGRKWRTAIVLGDANHFEMWRQYHVFAERYSNDSVFSTPEAALAWLRSQRPT*
Ga0070710_111352041	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	YSIDHENGCVVETWTGDVTARELAALWHRYTEDPEVQGLRRSLADLRHCRIAFTAEELSQLVSRIALPALQGRNWRTAIVLGDPTHFEMSRQFHALAESYSKDSVFSTPEAALAWLRAQRPK*
Ga0070700_1003372162	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	VPIAYSIDKENGCVVETWTGDITARDLTTHFRRFFADPEVLELRRSMVDLRHCRLVFTAAELSEIVSRIIMPALHGQRWRSAIVLGDPSHFEMSRQYHIFAASYSKDSVFSTPEAALA
Ga0070684_1003239612	3300005535	Corn Rhizosphere	VPIAYSIDRENGCVVETWTGDITARDLTTHFRRFFADPQVLELRRSMVDLRHCRLVFTAAELSEIVSRIIMPALHGQRWRSAIVLGDPSHFEMSRQYHIFAASYSKDSVFSTPEAALAWLRSQRPA*
Ga0068853_1013631761	3300005539	Corn Rhizosphere	FFTDPEVLALGRTLVDLRHCQFVITAAELEELVTRIVMPALHGRKWRTAIVLGDTNHFEMWRQYHVFAESYSNDSVFSTPEAALAWLRSQRPA*
Ga0068853_1020928401	3300005539	Corn Rhizosphere	VPIAYSIDHENGCVIENWTGDITKHVLAVHFRRFFTDPEVLALGRTLVDLRHCQFVLTGAELTELVSRIVMPALSGRRWRTAIVLGDTNHFEMWRQYHVFAESYS
Ga0070672_1006491182	3300005543	Miscanthus Rhizosphere	SSLTAARPISRQPGSRHRQGTRMPISYAIDRENGCIVETWTGDVTAKELAAHWRRYLADPEVLALRRTLVDLRHCRILFSAAELSQLVERLVLPALHGMNWRTAIVVGDPNHFEISRQYHVVAESYSQDSVFSTPEAALTWLRTQRQP*
Ga0070693_1015959721	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	VPITYSIDHENGCVIENWTGDITTRVLTVHFRRFFTDPEVLALGRTLVDLRHCQFVITAAELEELVTRIVMPALHGRKWRTAIVLGDTNHFEMWRHYHVFAESYSNDSVFSSCEGALAWLRSQRPT*
Ga0066670_107553032	3300005560	Soil	MPIDYSIDRENGCIVETWSGDVTAKELAAHWRRYLSDPDVLALRRTLVDLRNCRIAFTAAELSQLVERIVLPALHGMNWRTAIVLGEPNHFEISRQYHAIAESYSQDSVFS
Ga0068855_1019185742	3300005563	Corn Rhizosphere	VPIAYSIDHENGCVIENWTGDITKRVLTVHFRRFFSDPEVLALGRTLVDLRHCQLVVTAPELSELVKRIVMPALHGRTWRTAIVLGDTNHFEMWRQYHVFAESYSNDSVFS
Ga0070664_1019034422	3300005564	Corn Rhizosphere	FADPEVLELRRSMVDLRHCRLVFTAAELAEIVSRIIMPALHGQRWRSAIVLGDPSHFEMSRQYHIFAASYSKDSVFSTPEAALAWLRSQRPA*
Ga0068856_1009994913	3300005614	Corn Rhizosphere	VLALGRTLVDLRYCQLVITAAELNELVSRIVMPALHGRKWRTAIVLGDTNHFEMWRQYHVFAESYSKDSVFSTPEAALAWLRAQRPT*
Ga0068852_1004931312	3300005616	Corn Rhizosphere	VPIAYSIDRENGCILETWTGDVTARELMAHWRRYLADPDVLALRRTLVDLRHCHILFTAAELSEMVSRIVLPALQGRRWRTAIVLGDPSHFEMSRQYHAFAESYSKDSVFSTPEAALAWLRSQ
Ga0068852_1015606182	3300005616	Corn Rhizosphere	VPITYSIDHENGCVIENWTGDITKRVLTVHFRRFFSDPEVLALGRTLVDLRHCQLVVTAPELSELVKRIVMPALHGRTWRTAIVLGDTNHFEMWRQYHVFAESYSNDSVFSTPE
Ga0068864_1017569591	3300005618	Switchgrass Rhizosphere	TILAGSHAAATRACEGFANRRGETVPIAYSIDRENGCILETWTGDVTARELMAHWRRYLADPDVLALRRTLVDLRHCHILFTAAELSEMVSRIVLPALQGRRWRTAIVLGDPSHFEMSRQYHAFAESYSKDSVFSTPEAALAWLRSQRLQSP*
Ga0068861_1020221352	3300005719	Switchgrass Rhizosphere	RPISRQPGSRHRQGTRMPISYAIDRENGCIVETWTGDVTAKELAAHWRRYLADPEVLALRRTLVDLRHCRILFSAAELSQLVERLVLPALHGMNWRTAIVVGDPNHFEISRQYHVVAESYSQDSVFSTPEAALTWLRTQRQP*
Ga0068851_105329582	3300005834	Corn Rhizosphere	SIDRENGCILETWTGDVTARELMAHWRRYLADPDVLALRRTLVDLRHCHILFTAAELSEMVSRIVLPALQGRRWRTAIVLGDPSHFEMSRQYHAFAESYSKDSVFSTPEAALAWLRSQRLQSP*
Ga0068863_1015535781	3300005841	Switchgrass Rhizosphere	VPIAYSIDHENGCVIENWTGDITKHVLAVHFRRFFTDPEVLALGRTLVDLRHCQFVLTAAELTELVSRIVMPALSGRRWRTAIVLGDTNHFEMWRQYHVFAESYSNDSVFS
Ga0068858_1001808943	3300005842	Switchgrass Rhizosphere	VPIAYSIDKENGCVVETWTGDITARDLTTHFRRFFADPEVLELRRSMVDLRHCRLVFTAAELSEIVSRIIMPALHGQRWRSAIVLGDPSHFEMSRQYHIFAASYSKDSVFSTPEAALAWLRSQRP
Ga0068860_1006507891	3300005843	Switchgrass Rhizosphere	TDPEVLALGRTLVDLRHCQFVLTAAELTELVSRIVMPALSGRRWRTAIVLGDTNHFEMWRQYHVFAESYSNDSVFSTPEAALAWLRSQRPT*
Ga0074063_126709401	3300006953	Soil	VPIAYSIDRENGCIVETWTGDITARDLAAHWRRYLNDPDVLALRRTMVDLRNSRIAFTAAELSQLVERIVLPALHGMNWRTAIVLGDPNHFEMSRQYHVVAESYSQDSVFSTPEAALAWLRSQRQA*
Ga0079219_111250531	3300006954	Agricultural Soil	VPIDYSIDRENGCVVETWTGDITARDLTTHFRRFFTDPEVLELRRSMVDLRHCRLVFTAAELSEIVSRIVMPALHGQRWRSAIVLGDPSHFEMSRQYHILA
Ga0105251_106333472	3300009011	Switchgrass Rhizosphere	VPIAYSIDRENGCILETWTGDVTARELMAHWRRYLADPDVLALRRTLVDLRHCHILFTAAELSEMVSRIVLPALQGRRWRTAIVLGDPSHFEMSRQYHAFAESYS
Ga0066709_1007760951	3300009137	Grasslands Soil	VPIAYSIDRENGCIVETWTGDVTAKELAMHWRRYLSDPDVLALRRTLVDLRNCRIAFTAAELSQLVERIVLPALHGMNWRTAIVLGEPNHFEISRQYHAIAESYSQDSVFSTSEAALAWLRTQRPT*
Ga0105237_124273571	3300009545	Corn Rhizosphere	TVHFRRFFSDPEVLALGRTLVDLRHCQLVVTAPELSELVKRIVMPALHGRTWRTAIVLGDTNHFEMWRQYHVFAESYSNDSVFSTPEAALAWLRSQRPT*
Ga0105238_123120242	3300009551	Corn Rhizosphere	VPIAYSIDKENGCVVETWTGDITARDLTTHFRRFFADPEVLELRRSMVDLRHCRLVFTAAELSEIVSRIIMPALHGQRWRSAIVLGDPSHFEMSRQYHIFAASYSKDSVFST
Ga0105249_127437751	3300009553	Switchgrass Rhizosphere	VPIAYSIDKENGCVVETWTGDITARDLTTHFRRFFADPEVLELRRSMVDLRHCRLVFTAAELSEIVSRIIMPALHGQRWRSAIVLGDPSHFEMSRQYHIFAASYTKDSVFSTPEAAL
Ga0134124_120438151	3300010397	Terrestrial Soil	VPIAYSIDHENGCVIENWTGDITKRVLTVHFRRFFSDPEVLALGRTLVDLRHCQLVVTAPELSELVKRIVMPALHGRTWRTAIVLGDTNHFEMWRQYHVFAESYSNDSVFSTPEAALAW
Ga0134122_110861321	3300010400	Terrestrial Soil	MPIAYSIDRENGCIVETWTGDVTAKELATHWRHYLADSEVLALRRTLVDLRNCRIAFTAAELSQLVERLILPVLHGMNWRTAIVVGDPNHFEISRQYHVVAESYSQDSVFSTPEAALAWLRTQRQP*
Ga0150984_1025724942	3300012469	Avena Fatua Rhizosphere	MPIAYSIDRENGCIVETWTGDVTAKELAAHWRHYLADSEVLALRRTLVDLRNCRIVFTAAELSQLVERLILPALHGMNWRTAIVVGDPNHFEISRQYHVVAESYSQDSVFSTPEAALAWLRTQRQP*
Ga0164300_101715711	3300012951	Soil	VPIDYSIDRENGCVIETWTGDITARDLTTHFRRFFADPEVLELRRSMVDLRHCRLVFTAAELSEIVSRIVMPALHGQRWRSAIVLGDPSHCEMSRQYHI
Ga0164298_103479042	3300012955	Soil	VPIAYSIDKENGCVVETWTGDITARDLTTHFRRFFADPEVLELRRSMVDLRHCRLVFTAAELSEIVSRIVMPALHGQRWRSAIVLGDPSHFEMSRQYHIFAASYSKDSVFSTPEAALAWLRSQRPA*
Ga0164298_106545072	3300012955	Soil	VPIAYSIDRENGCVIENWTGDITKHVLAVHFRRFFTDPEVLALGRTLVDLRHCQFVLTAAELTELVSRIVMPALSGRRWRTAIVLGDTNHFEMWRQY
Ga0164303_100763272	3300012957	Soil	VPIDYSIDRENGCVIETWTGDITARDLTTHFRRFFADPEVLELRRSMVDLRHCRLVFTAAELSEIVSRIVMPALHGQRWRSAIVLGDPSHFEMSRQYHIFAASYSKDSVFSTPEAALAWLRSQRPA*
Ga0164299_100598674	3300012958	Soil	IETWTGDITARDLTTHFRRFFADPEVLELRRSMVDLRHCRLVFTAAELSEIVSRIVMPALHGQRWRSAIVLGDPSHFEMSRQYHIFAASYSKDSVFSTPEAALAWLRSQRPA*
Ga0164301_102818362	3300012960	Soil	VPIAYSIDKENGCVVETWTGDITARDLTTHFRRFFADPEVLELRRSMVDLRHCRLVFTAAELSEIVSRIVMPALHGQRWRSAIVLGDPSHFEMSRQYHIFAASYSKDSVFSTPEA
Ga0164302_107698002	3300012961	Soil	VPIDYSIDRENGCVIETWTGDITARDLTTHFRRFFADPEVLELRRSMVDLRHCRLVFTAAELSEIVSRIVMPALHGQRWRSAIVLGDPSHFEMSRQYHIFAASYSKDSVFSTPEAALAWLRSQRPT*
Ga0164302_114580072	3300012961	Soil	ARELAAHWRRYLADPEVMALRRTLVDLRHSHITFTAAELSQLVERIVLPALHGMNWRTAIVLGDTDHFEMSRRYHLVAESYSQDSVFSTTEAALAWLRSQRQTPTE*
Ga0164308_120187841	3300012985	Soil	YSIDRENGCVIETWTGDITARDLTTHFRRFFADPEVLELRRSMVDLRHCRLVFTAAELSEIVSRIIMPALHGQRWRSAIVLGDPSHFEMSRQYHIFAASYSKDSVFSTPEAALAWLRSQRPT*
Ga0164304_100259752	3300012986	Soil	VPIDYSIDRENGCVIETWTGDITARDLTTHFRRFFADPEVLELRRSMVDLRHCRLVFTAAELSEIVSRIIMPALHGQRWRSAIVLGDPSHFEMSRQYHIFAASYSKDSVFSTPEAALAWLRSQRPA*
Ga0164304_110908471	3300012986	Soil	IAEERRVPITYSIDHENGCVIENWTGDITTRVLTVHFRRFFTDPEVLALGRTLVDLRHCQLVVTAAELSELVSRIVMPALHGRKWRTAIVLGDTNHFEMWRQYHVFAESYSNDSVFSTPEAALAWLRSQRPT*
Ga0164307_101501191	3300012987	Soil	VPIDYSIDRENGCVIETWTGDITARDLTTHFRRFFADPEVLELRRSMVDLRHCRLVFTAAELSEIVSRIIMPALHGQRWRSAIVLGDPSHFEMSRQYHIFAASY
Ga0164306_115737581	3300012988	Soil	DITARDLTTHFRRFFADPEVLELRRSMVDLRHCRLVFTAAELSEIVSRIVMPALHGQRWRSAIVLGDPSHFEMSRQYHIFAASYSKDSVFSTPEAALAWLRSQRPA*
Ga0157373_105284981	3300013100	Corn Rhizosphere	ITYSIDHENGCVIETWTGDITRRALAVHFRRFFTDPEVLALGRTLVDLRHCQFVITAAELEELVTRIVMPALHGRKWRTAIVLGDTNHFEMWRQYHVFAESYSNDSVFSTPEAALAWLRSQRPA*
Ga0157371_101581982	3300013102	Corn Rhizosphere	VPITYSIDHENGCVIENWTGDITKRVLTVHFRRFFSDPEVLALGRTLVDLRHCQLVVTAPELSELVKRIVMPALHGRTWRTAIVLGDTNHFEMWRQYHVFAESYSNDSVFSTPEAALAWLRSQRPT*
Ga0157370_119363321	3300013104	Corn Rhizosphere	GTILAGSPAAASRANRHPPRAEERGVPITYSIDHENGCVIENWTGDITKRVLTVHFRRFFSDPEVLALGRTLVDLRHCQLVVTAAELSELVKRIVMPALHGRTWRTAIVLGDTNHFEMWRQYHVFAESYSNDSVFSTPEAALAWLRSQRPT*
Ga0157369_113250501	3300013105	Corn Rhizosphere	AYSIDHENGCVIENWTGDITKRVLTVHFRRFFSDPEVLALGRTLVDLRHCQLVVTAPELSELVKRIVMPALHGRTWRTAIVLGDTNHFEMWRQYHVFAESYSNDSVFSTPEAALAWLRSQRPT*
Ga0157369_114582971	3300013105	Corn Rhizosphere	VPIAYSIDRENGCILETWTGDVTARELMAHWRRYLADPDVLALRRTLVDLRHCHILFTAAELSEMVSRIVLPALQGRRWRTAIVLGDPSHFEMSRQYHAFAESYSKDSVSSPPEAALAWLRSQRLQSP*
Ga0157369_120852182	3300013105	Corn Rhizosphere	CVIENWTGDITTRVLTVHFRRFFTDPEVLALGRTLVDLRHCRFVLTAGELEELVTRIVMPALHGRKWRTAIVIGDSDHFEMWRRYHVFAESYSKDTVFSTPEAALAWLRAQRPG*
Ga0163162_104611553	3300013306	Switchgrass Rhizosphere	RRFAAEPEVRELRRSMVDLRHCRLVFTAAELSEIVSRIIMPALHGQRWRSAIVLGDPSHFEMSRQYHIFAASYSKDSVFSTPEAALAWLRSQRPA*
Ga0163162_122098271	3300013306	Switchgrass Rhizosphere	LADPEVLALRRTLVDLRHCRILFSAAELSQLVERLVLPALHGMNWRTAIVVGDPNHFEISRQYHVVAESYSQDSVFSTPEAALTWLRTQRQP*
Ga0157372_107554121	3300013307	Corn Rhizosphere	ERRVPITYSIDHENGCVIETWTGDITRRALAVHFRRFFTDPEVLALGRTLVDLRHCQFVITAAELEELVTRIVMPALHGRKWRTAIVLGDTNHFEMWRQYHVFAESYSNDSVFSTPEAALAWLRSQRPA*
Ga0163163_104336001	3300014325	Switchgrass Rhizosphere	ISRQRGVPIAEESRVPIAYSIDHENGCVIENWTGDITKRVLTVHFRRFFSDPEVLALGRTLVDLRHCQLVVTAPELSELVKRIVMPALHGRTWRTAIVLGDTNHFEMWRQYHVFAESYSNDSVFSTPEAALAWLRSQRPT*
Ga0134073_102128922	3300015356	Grasslands Soil	VPIAYSIDRENGCIVETWSGDVTAKELAAHWRRYLSDPDVLALRRTLVDLRNCRIAFSSAELSQLVERIVLPALRGMNWRTAIVVGDPNHFEMSRQYHVVAESYSQDSVFS
Ga0132258_100830715	3300015371	Arabidopsis Rhizosphere	MPIAYSIDRENGCIVETWTGDVTAKELAAHWRHYLADAEVLALRRTLVDLRNCRIAFTAAELSQLVERLVLPALHGMNWRTAVVVGDPNHFEISRQYHVVAESYSQDSVFSTPEAALAWLRTQRQP*
Ga0132258_104183282	3300015371	Arabidopsis Rhizosphere	MDLDSSSTGTILAEATGAAFASTGHSPITGGRRLPIAYTIDRENGCVIETWTGNVSARDLAAHWRRYLADPDVMALRRTLVDLRHCHIVFTATELSQLVERIVLPALHGMNWRTAIVLGDTDHFEMSRRYHLVAESYSQDSVFSTTEAALAWLRSQRQTPTE*
Ga0132258_111365122	3300015371	Arabidopsis Rhizosphere	VPIAYSIDRENGCIIETWTGDVTARELMAHWRRYLADPEVLALRRTLVDLRHCHIAFTAAELSEMVSRIVLPAIQGRRWRTAIVLGEPSHFEMSRQYHAFAESYSKDSVFSTPEAALAWLRSQRVT*
Ga0132257_1017856411	3300015373	Arabidopsis Rhizosphere	DLRGDRRGCIACPVADRIRVPIAYSIDRENGCVVETWTGDITARDLTTHFRRFFADPQVLELRRSMVDLRHCRLVFTAAELSEIVSRIIMPALHGQRWRSAIVLGDPSHFEMSRQYHIFAASYSKDSVFSTPEAALAWLRSQRPA*
Ga0132257_1021085302	3300015373	Arabidopsis Rhizosphere	VPIDYSIGRENGCVVETWTGDITARDLTTHFRRFFADPEVLELRRSMVDLRHCRLVFTAAELAEIVSRIIMPALHGQRWR
Ga0132255_1012369343	3300015374	Arabidopsis Rhizosphere	PIAYSIDHENGCVIENWTGDITKRVLTVHFRRFFTDPEVLALGRTLVDLRHCQFVLTAAELTELVSRIVMPALSGRRWRTAIVLGDTNHFEMWRQYHVFAESYSNDSVFSTPEAALAWLRSQRPT*
Ga0163161_104830413	3300017792	Switchgrass Rhizosphere	RVPIAYSIDHENGCVIEHWTGDITKHVLAVHFRRFFTDPEVLALGRTLVDLRHCQFVLTAAELTELVSRIVMPALSGRRWRTAIVLGDTNHFEMWRQYHVFAESYSNDSVFSTPEAALAWLRSQRPT
Ga0182009_100300563	3300021445	Soil	VPIAYSIDHEDGCVIETWTGDVTARELMTHWRHYLADPDVLALRRTLVDLRHCRILFTAAELSEMVSRIVLPALQGRRWRTAIVLGDPSHFEMSRQYHAFAESYSKASVFSTPEAALAWLRAQRPT
Ga0182009_106002191	3300021445	Soil	VPIAYSIDRENGCVVETWTGDVTARELMAHWRRYLADPEVLALRRTLVDLRHCHIVFTASELSEMVSRVVLPAIQGRRWRTAIVLGDPSHFEMSRQYHAFAESYSKDSVFST
Ga0207697_102166981	3300025315	Corn, Switchgrass And Miscanthus Rhizosphere	VPIAYSIDKENGCVVETWTGDITARDLTTHFRRFFADPEVLELRRSMVDLRHCRLVFTAAELSEIVSRIIMPALHGQRWRSAIVLGDPSHFEMSRQYHIFAASYSKDSVFSTPE
Ga0207656_100191671	3300025321	Corn Rhizosphere	TWTGDVTARELMAHWRRYLADPDVLALRRTLVDLRHCHILFTAAELSEMVSRIVLPALQGRRWRTAIVLGDPSHFEMSRQYHAFAESYSKDSVFSTPEAALAWLRSQRLQSP
Ga0207682_101505281	3300025893	Miscanthus Rhizosphere	SIDRENGCIVETWTGDVTAKELAAHWRHYLADAEVLALRRTLVDLRNCRIAFTAAELSQLVERLVLPALHGMNWRTAVVVGDPNHFEISRQYHVVAESYSQDSVFSTPEAALTWLRTQRQ
Ga0207642_101413552	3300025899	Miscanthus Rhizosphere	VPIAYSIDKENGCVVETWTGDITARDLTTHFRRFFADPEVLELRRSMVDLRHCRLVFTAAELSEIVSRIIMPALHGQRWRSAIVLGDPSHFEMSRQYHIFAASYSKDSVFSTPEAALAWLRSQRPA
Ga0207680_106453661	3300025903	Switchgrass Rhizosphere	WTGDITKHVLAVHFRRFFTDPEVLALGRTLVDLRHCQFVLTAAELTELVSRIVMPALSGRRWRTAIVLGDTNHFEMWRQYHVFAESYSNDSVFSTPEAALAWLRSQRPT
Ga0207647_103496991	3300025904	Corn Rhizosphere	FFADPEVLELRRSMVDLRHCRLVFTAAELAEIVSRIIMPALHGQRWRSAIVLGDPSHFEMSRQYHIFAASYSKDSVFSTPEAALAWLRSQRPA
Ga0207647_103502061	3300025904	Corn Rhizosphere	VPIAYSIDHENGCVIENWTGDITKRVLTVHFRRFFSDPEVLALGRTLVDLRHCQLVVTAPELSELVKRIVMPALHGRTWRTAIVLGDTNHFEMWRQYHVFAESYSNDSVFSTPEAALAWLRSQRPT
Ga0207645_100142082	3300025907	Miscanthus Rhizosphere	MPISYAIDRENGCIVETWTGDVTAKELAAHWRRYLADPEVLALRRTLVDLRHCRILFSAAELSQLVERLVLPALHGMNWRTAIVVGDPNHFEISRQYHVVAESYSQDSVFSTPEAALTWLRTQRQP
Ga0207645_101229093	3300025907	Miscanthus Rhizosphere	VPIAYSIDHENGCVIEHWTGDITKHVLAVHFRRFFTDPEVLALGRTLVDLRHCQFVLTAAELTELVSRIVMPALSGRRWRTAIVLGDTNHFEMWRQYHVFAESYSNDSVFSTPEAALAWLRSQRPT
Ga0207645_107423161	3300025907	Miscanthus Rhizosphere	VPIAYSIDKENGCVVETWTGDITARDLTTHFRRFFADPEVLELRRSMVDLRHCRLVFTAAELSEIVSRIIMPALHGQRWRSAIVLGDPSHFEMSRQYHIFAA
Ga0207645_111806461	3300025907	Miscanthus Rhizosphere	MPIAYSIDRENGCIVETWTGDVTAKELAAHWRHYLADAEVLALRRTLVDLRNCRIAFTAAELSQLVERLVLPALHGMNWQTAVVVGDPNHFEISRQYHVVAESYSQDSVFSTPEAALAWLRTQR
Ga0207705_111088132	3300025909	Corn Rhizosphere	IDHENGCVIENWTGDITTRVLTVHFRRFFTDPEVLALGRTLVDLRHCQLVVTAAELSELVTRIVMPALHGRTWRTAIVLGDTNHFEMWRHYHVFAESYSNDSVFSSCEGALAWLRSQRPT
Ga0207693_112463942	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	PEVQALRRSLADLRHCRIAFTSEELSQLISRIALPALHGRTWRTAIVLGDTSHFEMSRRFHAFAESYSQDSVFSTPEAALAWLRSQRPT
Ga0207657_100601283	3300025919	Corn Rhizosphere	VPITYSIDHENGCVIENWTGDITKRVLTVHFRRFFSDPEVLALGRTLVDLRHCQLVVTAPELSELVKRIVMPALHGRTWRTAIVLGDTNHFEMWRQYHVFAESYSNDSVFSTPEAALAWLRSQRPT
Ga0207649_104945262	3300025920	Corn Rhizosphere	VPIAYSIDRENGCILETWTGDVTARELMAHWRRYLADPDVLALRRTLVDLRHCHILFTAAELSEMVSRIVLPALQGRRWRTAIVLGDPSHFEMSRQYHAFAESYSKDSVFSTPEAALAWLRSQRLQSP
Ga0207694_115005872	3300025924	Corn Rhizosphere	VPIAYSIDKENGCVVETWTGDITARDLTTHFRRFFADPEVLELRRSMVDLRHCRLVFTAAELSEIVSRIIMPALHGQRWRSAIVLGDP
Ga0207650_109663201	3300025925	Switchgrass Rhizosphere	CILETWTGDVTARELMAHWRRYLADPDVLALRRTLVDLRHCHILFTAAELSEMVSRIVLPALQGRRWRTAIVLGDPSHFEMSRQYHAFAESYSKDSVFSTPEAALAWLRSQRLQSP
Ga0207701_103574571	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	VPIAYSIDHENGCVIEHWTGDITKHVLAVHFRRFFTDPEVLALGRTLVDLRHCQFVLTGAELTELVSRIVMPALSGRRWRTAIVLGDTNHFEMWRQYHVFAESYSNDSVFSTPEAALAWLRSQRPT
Ga0207701_104649412	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	VPIAYSIDKENGCVVETWTGDITARDLTTHFRRFFADPEVLELRRSMVDLRHCRLVFTAAELSEIVSRIIMPALHGQRWRSAIVLGDPSHFEMSRQYHIFAASYSKDSVFSTPEAALAWLRSQRPT
Ga0207644_101030772	3300025931	Switchgrass Rhizosphere	VPIAYSIDHENGCVIENWTGDITKHVLAVHFRRFFTDPEVLALGRTLVDLRHCQFVLSAAELTELVSRIVMPALSGRRWRTAIVLGDTNHFEMWRQYHVFAESYSNDSVFSTPEAALAWLRSQRPT
Ga0207706_106777472	3300025933	Corn Rhizosphere	MPIAYSIDRENGCIVETWTGDVTAKELAAHWRHYLADAEVLALRRTLVDLRNCRIAFTAAELSQLVERLVLPALHGMNWRTAIVVGDPNHFEISRQYHVVAESYSQDSVFSTPEAALTWLRTQRQP
Ga0207686_102752781	3300025934	Miscanthus Rhizosphere	NGCVVETWTGDITARDLTTHFRRFFADPEVLELRRSMVDLRHCRLVFTAAELSEIVSRIIMPALHGQRWRSAIVLGDPSHFEMSRQYHIFAASYSKDSVFSTPEAALAWLRSQRPT
Ga0207669_115900801	3300025937	Miscanthus Rhizosphere	VPIAYSIDKENGCVVETWTGDITARDLTTHFRRFFADPEVLELRRSMVDLRHCRLVFTAAELSEIVSRIIMPALHGQRWRSAIVLGDPSHFEMSR
Ga0207691_100236675	3300025940	Miscanthus Rhizosphere	VPIAYSIDKENGCVVETWTGDITARDLTTHFRRFFADPEVLELRRSMVDLRHCRLVFTAAELSEIVSRIIMPALHGQRWRSAIVLGDPSHFEMSWQYHIFAASYSKDSVFSTPEAALAWLRSQRVQSP
Ga0207691_101429094	3300025940	Miscanthus Rhizosphere	VPIAYSIDHENGCVIENWTGDITKHVLAVHFRRFFTDPEVLALGRTLVDLRHCQFVLTAAELTELVSRIVMPALSGRRWRTAIVLGDTNHFEMWRQYHVFAESYSNDSVFSTPEAALAWLRSQRPT
Ga0207711_115981162	3300025941	Switchgrass Rhizosphere	VPIAYSIDHENGCVIENWTGDITKHVLAVHFRRFFTDPEVLALGRTLVDLRHCQFVLTAAELTELVSRIVMPALSGRRWRTAIVLGDTNHFEMWRQYHVFAESYSNDSVFSTPEAALAWLRS
Ga0207661_107288992	3300025944	Corn Rhizosphere	VPIAYSIDRENGCVVETWTGDITARDLTTHFRRFFADPQVLELRRSMVDLRHCRLVFTAAELSEIVSRIIMPALHGQRWRSAIVLGDPSHFEMLRQYHIFAASYSKDSVFSTPEAALAWLRSQRPT
Ga0207651_112944091	3300025960	Switchgrass Rhizosphere	ISYAIDRENGCIVETWTGDVTAKELAAHWRRYLADPEVLALRRTLVDLRHCRILFSAAELSQLVERLVLPALHGMNWRTAIVVGDPNHFEISRQYHVVAESYSQDSVFSTPEAALTWLRTQRQP
Ga0207658_108270352	3300025986	Switchgrass Rhizosphere	VPIAYSIDKENGCVVETWTGDITARDLTTHFRRFFADPEVLELRRSMVDLRHCRLVFTAAELSEIVSRIIMPALHGQRWRSAIVLGDPSHFEMSRQYH
Ga0207677_105975292	3300026023	Miscanthus Rhizosphere	VPIAYSIDKENGCVVETWTGDITARDLTTHFRRFFADPEVLELRRSMVDLRHCRLVFTAAELSEIVSRIIMPALHGQRWRSAIVLGDPSHFEMSRQYHI
Ga0207703_118842021	3300026035	Switchgrass Rhizosphere	VPIAYSIDHENGCVIENWTGDITKHVLAVHFRRFFSDPEVLALGRTLVDLRHCQFVLTAAELTELVSRIVMPALSGLRWRTAIVLGDTNHFEMWRQ
Ga0207639_111725262	3300026041	Corn Rhizosphere	RRFFTDPEVLALGRTLVDLRHCQFVITAAELEELVTRIVMPALHGRKWRTAIVLGDTNHFEMWRQYHVFAESYSNDSVFSTPEAALAWLRSQRPA
Ga0207639_120793481	3300026041	Corn Rhizosphere	VPITYSIDHENGCVIENWTGDITTRVLTVHFRRFFTDPEVLALGRTLVDLRHCQLVVTAAELSELVTRIVMPALHGRTWRTAIVLGDTNHFEMWRHYHVFAESYSNDSVFSSCEGALAWLRSQRPT
Ga0207678_111174861	3300026067	Corn Rhizosphere	VPIAYSIDRENGCVVETWTGDITARDVTTHFRRFFADPEVLELRRSMVDLRHCRLVFTAAELAEIVSRIIMPALHGQRWRSAIVLGDPSHFEMSRQYHIFAASYSKDSVFSTPEAALAWLRSQRPA
Ga0207678_111867952	3300026067	Corn Rhizosphere	VPIAYSIDHENGCVIENWTGDITKRVLTVHFRRFFSDPEVLALGRTLVDLRHCQLVVTAPELSELVKRIVMPALHGRTWRTAIVLGDTNHFEMWRHYHVFAESYSNDSVFSSCEGALAWLRSQRPT
Ga0207702_117899651	3300026078	Corn Rhizosphere	VIEDWTGDITTHVLAVHFRRFFTDPEVLALGRTLVDLRYCQLVITAAELNELVSRIVMPALHGRKWRTAIVLGDTNHFEMWRQYHVFAESYSKDSVFSTPEAALAWLRAQRPT
Ga0207676_109907202	3300026095	Switchgrass Rhizosphere	VPIAYSIDRENGCILETWTGDVTARELMAHWRRYLADPDVLALRRTLVDLRHCHILFTAAELSEMVSRIVLPALQGRRWRTAIVLGDPSHFEMSRQYHAFAESYSKDSVFSTPEAAMTWMQTQSP
Ga0268264_102560041	3300028381	Switchgrass Rhizosphere	TDPEVLALGRTLVDLRHCQFVLTAAELTELVSRIVMPALSGRRWRTAIVLGDTNHFEMWRQYHVFAESYSNDSVFSTPEAALAWLRSQRPT
Ga0268240_101218641	3300030496	Soil	LPITYAIDHENGCVIEDWTGDITTRDLAAHFRRFFTDPEVLALGRTLVDLRHCKFVMTAAELEELVTRIVMPALHGRKWRTAIVIGDSNHFEMWRQYHVFAES
Ga0310813_112623611	3300031716	Soil	LVDLRHCQLVVTAPELSELVKRIVMPALHGRTWRTAIVLGDTNHFEMWRQYHVFAESYSNDSVFSTPEAALAWLRSQRPT
Ga0308175_1000660782	3300031938	Soil	VPIAYSIDHEDGCVIETWTGDVTARELMAHWRRYLADPAVLALRRTLVDLRHCRIVFTPAELSEMVSRIVLPAIQGRRWRTAIVLGDPTHFEMSRQYHAFAESYSKDSVFSTPEAALAWLRSQRLT
Ga0308175_1003441902	3300031938	Soil	VPITYSIDHEDGCVIETWTGDVTARELTAHWRRYLADPAVLALRRTLVDLRHCRIVFTAAELSELVSRIVLPALQGRRWRTAIVLGDPSHFEMSRQYHAFAESYSKDSVFSTPEAALAWLRAQRPT
Ga0308175_1019096762	3300031938	Soil	VPIAYSIDHENGCVIENWTGDITKHVLAVHFRRFFTDPEVLALGRTLVDLRHCQFVLTGAELTELVSRIVMPALSGRRWRTAIVLGDTNHFEMWRQYHVFAESYSNDSVFSTPEAALAWLRSQRPT
Ga0308175_1021868221	3300031938	Soil	WRRYLADPEVLALRRTLVDLRNCRILFTAAELSQLVERIVLPALHGMNWRTAIVLGEPNHFEISRQYHVIAESYSQDSVFSTPEAASAWLRTQRQP
Ga0308176_106900181	3300031996	Soil	VPIAYSIDHENGCVIENWTGDITKHVLAVHFRRFFTDPEVLALGRTLVDLRHCQFVLTPAELTELVSRIVMPALSGRRWRTAIVLGDTNHFEMWRQYHVFAESYSNDSVFSTPEAALAWLRSQRPT
Ga0308173_117666861	3300032074	Soil	VPITYTIDHEDGCVIETWTGDVTARELTAHWRRYLADPAVLALRRTLVDLRHCRIVFTAAELSELVSRIVLPALQGRRWRTAIVLGDPSHFEMSRQYHAFAESYSKDSVFSTPEAALAWLRAQRPT

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F059689

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences