Metagenome / Metatranscriptome Family F059670

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F059670
Family Type	Metagenome / Metatranscriptome
Number of Sequences	133
Average Sequence Length	58 residues
Representative Sequence	MKILGLLVCVLGWLIAVMSVKVPGVYAQLLVAAAGFVVAAIGALAIVNRAHLKDAIWKA
Number of Associated Samples	86
Number of Associated Scaffolds	133

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	75.94 %
% of genes near scaffold ends (potentially truncated)	34.59 %
% of genes from short scaffolds (< 2000 bps)	74.44 %
Associated GOLD sequencing projects	75
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.61

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (60.150 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (38.346 % of family members)
Environment Ontology (ENVO)	Unclassified (42.857 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (42.105 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 62.07% β-sheet: 0.00% Coil/Unstructured: 37.93%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.61
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.61
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 133 Family Scaffolds
PF00909	Ammonium_transp	41.35
PF00196	GerE	9.02
PF00543	P-II	2.26
PF07730	HisKA_3	1.50
PF16980	CitMHS_2	1.50
PF00881	Nitroreductase	0.75
PF13432	TPR_16	0.75
PF00158	Sigma54_activat	0.75
PF02321	OEP	0.75
PF00067	p450	0.75
PF00578	AhpC-TSA	0.75
PF00589	Phage_integrase	0.75
PF13409	GST_N_2	0.75

COG ID	Name	Functional Category	% Frequency in 133 Family Scaffolds
COG0004	Ammonia channel protein AmtB	Inorganic ion transport and metabolism [P]	41.35
COG0347	Nitrogen regulatory protein PII	Signal transduction mechanisms [T]	2.26
COG1538	Outer membrane protein TolC	Cell wall/membrane/envelope biogenesis [M]	1.50
COG3850	Signal transduction histidine kinase NarQ, nitrate/nitrite-specific	Signal transduction mechanisms [T]	1.50
COG3851	Signal transduction histidine kinase UhpB, glucose-6-phosphate specific	Signal transduction mechanisms [T]	1.50
COG4564	Signal transduction histidine kinase	Signal transduction mechanisms [T]	1.50
COG4585	Signal transduction histidine kinase ComP	Signal transduction mechanisms [T]	1.50
COG2124	Cytochrome P450	Defense mechanisms [V]	0.75

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	60.15 %
Unclassified	root	N/A	39.85 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	60.15 %
Unclassified	root	N/A	39.85 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	60.15 %
Unclassified	root	N/A	39.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.85 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	15.79 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.01 %
unclassified Bacteria	no rank	All Organisms → cellular organisms → Bacteria → unclassified Bacteria	1.50 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.85 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	11.28 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	4.51 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1.50 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	1.50 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.85 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	11.28 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	4.51 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1.50 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1.50 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.85 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	11.28 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4.51 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	1.50 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1.50 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.85 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	11.28 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1.50 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1.50 %
unclassified Acidobacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae	0.75 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.85 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	11.28 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1.50 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1.50 %
Acidobacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	0.75 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.75 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004091\|Ga0062387_100208199	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	1187	Open in IMG/M
3300004092\|Ga0062389_100507744	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1354	Open in IMG/M
3300004092\|Ga0062389_102437583	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	693	Open in IMG/M
3300004092\|Ga0062389_103985020	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	555	Open in IMG/M
3300004267\|Ga0066396_10107170	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	523	Open in IMG/M
3300005332\|Ga0066388_101412902	All Organisms → cellular organisms → Bacteria	1210	Open in IMG/M
3300005332\|Ga0066388_101726538	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1109	Open in IMG/M
3300005332\|Ga0066388_104102256	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	743	Open in IMG/M
3300005518\|Ga0070699_101666282	All Organisms → cellular organisms → Bacteria	584	Open in IMG/M
3300005524\|Ga0070737_10020641	All Organisms → cellular organisms → Bacteria	4538	Open in IMG/M
3300005529\|Ga0070741_10004613	All Organisms → cellular organisms → Bacteria	31940	Open in IMG/M
3300005607\|Ga0070740_10001701	All Organisms → cellular organisms → Bacteria	28895	Open in IMG/M
3300007255\|Ga0099791_10321808	Not Available	739	Open in IMG/M
3300007255\|Ga0099791_10581364	Not Available	547	Open in IMG/M
3300007265\|Ga0099794_10031986	All Organisms → cellular organisms → Bacteria	2467	Open in IMG/M
3300007819\|Ga0104322_138183	All Organisms → cellular organisms → Bacteria	2062	Open in IMG/M
3300009012\|Ga0066710_101327440	All Organisms → cellular organisms → Bacteria	1116	Open in IMG/M
3300009038\|Ga0099829_10020950	All Organisms → cellular organisms → Bacteria	4487	Open in IMG/M
3300009038\|Ga0099829_10028147	All Organisms → cellular organisms → Bacteria	3971	Open in IMG/M
3300009038\|Ga0099829_10029867	All Organisms → cellular organisms → Bacteria	3873	Open in IMG/M
3300009038\|Ga0099829_10325358	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1263	Open in IMG/M
3300009038\|Ga0099829_10428173	All Organisms → cellular organisms → Bacteria	1095	Open in IMG/M
3300009038\|Ga0099829_10607051	All Organisms → cellular organisms → Bacteria	910	Open in IMG/M
3300009088\|Ga0099830_10071744	All Organisms → cellular organisms → Bacteria	2513	Open in IMG/M
3300009088\|Ga0099830_10113912	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2037	Open in IMG/M
3300009088\|Ga0099830_10131598	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1905	Open in IMG/M
3300009088\|Ga0099830_10281178	Not Available	1324	Open in IMG/M
3300009088\|Ga0099830_11574955	Not Available	547	Open in IMG/M
3300009089\|Ga0099828_10235975	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1637	Open in IMG/M
3300009089\|Ga0099828_11243248	Not Available	660	Open in IMG/M
3300009089\|Ga0099828_11878368	Not Available	525	Open in IMG/M
3300009137\|Ga0066709_102257534	Not Available	748	Open in IMG/M
3300009698\|Ga0116216_10005768	All Organisms → cellular organisms → Bacteria	7931	Open in IMG/M
3300009792\|Ga0126374_11752446	Not Available	518	Open in IMG/M
3300010048\|Ga0126373_10354722	All Organisms → cellular organisms → Bacteria	1480	Open in IMG/M
3300010048\|Ga0126373_11426389	Not Available	758	Open in IMG/M
3300010048\|Ga0126373_11764702	Not Available	683	Open in IMG/M
3300010358\|Ga0126370_10081086	Not Available	2182	Open in IMG/M
3300010361\|Ga0126378_11423875	Not Available	785	Open in IMG/M
3300010361\|Ga0126378_12397768	All Organisms → cellular organisms → Bacteria	602	Open in IMG/M
3300010376\|Ga0126381_100046180	All Organisms → cellular organisms → Bacteria	5305	Open in IMG/M
3300010379\|Ga0136449_100488502	All Organisms → cellular organisms → Bacteria	2143	Open in IMG/M
3300011269\|Ga0137392_10021487	All Organisms → cellular organisms → Bacteria	4535	Open in IMG/M
3300011269\|Ga0137392_10039054	All Organisms → cellular organisms → Bacteria	3504	Open in IMG/M
3300011269\|Ga0137392_10047776	All Organisms → cellular organisms → Bacteria	3207	Open in IMG/M
3300011269\|Ga0137392_10166909	Not Available	1786	Open in IMG/M
3300011269\|Ga0137392_10238794	All Organisms → cellular organisms → Bacteria	1493	Open in IMG/M
3300011270\|Ga0137391_10354385	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1260	Open in IMG/M
3300011270\|Ga0137391_10408256	Not Available	1160	Open in IMG/M
3300011271\|Ga0137393_10472379	All Organisms → cellular organisms → Bacteria	1076	Open in IMG/M
3300011271\|Ga0137393_11122605	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	668	Open in IMG/M
3300012096\|Ga0137389_10145852	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1932	Open in IMG/M
3300012189\|Ga0137388_10131486	Not Available	2193	Open in IMG/M
3300012189\|Ga0137388_10740198	Not Available	912	Open in IMG/M
3300012189\|Ga0137388_11290647	Not Available	669	Open in IMG/M
3300012202\|Ga0137363_10881473	All Organisms → cellular organisms → Bacteria	760	Open in IMG/M
3300012205\|Ga0137362_10057316	All Organisms → cellular organisms → Bacteria	3194	Open in IMG/M
3300012205\|Ga0137362_10674755	Not Available	889	Open in IMG/M
3300012211\|Ga0137377_11346942	Not Available	643	Open in IMG/M
3300012211\|Ga0137377_11468823	Not Available	608	Open in IMG/M
3300012361\|Ga0137360_10196845	All Organisms → cellular organisms → Bacteria	1629	Open in IMG/M
3300012361\|Ga0137360_10530736	All Organisms → cellular organisms → Bacteria	1004	Open in IMG/M
3300012363\|Ga0137390_11788943	Not Available	546	Open in IMG/M
3300012923\|Ga0137359_10765035	Not Available	838	Open in IMG/M
3300012923\|Ga0137359_11266479	All Organisms → cellular organisms → Bacteria	625	Open in IMG/M
3300015245\|Ga0137409_10197050	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1816	Open in IMG/M
3300016270\|Ga0182036_10334950	All Organisms → cellular organisms → Bacteria	1162	Open in IMG/M
3300016270\|Ga0182036_11836103	Not Available	513	Open in IMG/M
3300016319\|Ga0182033_11247527	Not Available	667	Open in IMG/M
3300016319\|Ga0182033_11661037	Not Available	578	Open in IMG/M
3300016341\|Ga0182035_11055387	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	722	Open in IMG/M
3300016357\|Ga0182032_10119795	All Organisms → cellular organisms → Bacteria	1896	Open in IMG/M
3300016371\|Ga0182034_10363451	All Organisms → cellular organisms → Bacteria	1178	Open in IMG/M
3300016387\|Ga0182040_10854354	All Organisms → cellular organisms → Bacteria	752	Open in IMG/M
3300016387\|Ga0182040_11290779	Not Available	616	Open in IMG/M
3300021046\|Ga0215015_10341766	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	879	Open in IMG/M
3300021086\|Ga0179596_10563087	Not Available	578	Open in IMG/M
3300021151\|Ga0179584_1088954	Not Available	513	Open in IMG/M
3300021560\|Ga0126371_10201574	All Organisms → cellular organisms → Bacteria	2085	Open in IMG/M
3300021560\|Ga0126371_11551460	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	789	Open in IMG/M
3300021560\|Ga0126371_11675231	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	760	Open in IMG/M
3300021560\|Ga0126371_13428968	All Organisms → cellular organisms → Bacteria	535	Open in IMG/M
3300026499\|Ga0257181_1068314	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	607	Open in IMG/M
3300026551\|Ga0209648_10065606	All Organisms → cellular organisms → Bacteria	3067	Open in IMG/M
3300026557\|Ga0179587_10314754	Not Available	1011	Open in IMG/M
3300027671\|Ga0209588_1162425	Not Available	705	Open in IMG/M
3300027706\|Ga0209581_1015722	All Organisms → cellular organisms → Bacteria	4255	Open in IMG/M
3300027846\|Ga0209180_10200401	All Organisms → cellular organisms → Bacteria	1151	Open in IMG/M
3300027846\|Ga0209180_10274790	Not Available	967	Open in IMG/M
3300027846\|Ga0209180_10339978	Not Available	857	Open in IMG/M
3300027875\|Ga0209283_10842290	Not Available	560	Open in IMG/M
3300027903\|Ga0209488_10351249	Not Available	1096	Open in IMG/M
3300027968\|Ga0209061_1034550	Not Available	2303	Open in IMG/M
3300028536\|Ga0137415_10751638	Not Available	786	Open in IMG/M
3300030494\|Ga0310037_10045607	Not Available	2091	Open in IMG/M
3300031546\|Ga0318538_10449637	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	698	Open in IMG/M
3300031573\|Ga0310915_10240931	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1272	Open in IMG/M
3300031771\|Ga0318546_11053222	Not Available	572	Open in IMG/M
3300031796\|Ga0318576_10016581	All Organisms → cellular organisms → Bacteria	2846	Open in IMG/M
3300031821\|Ga0318567_10143300	Not Available	1318	Open in IMG/M
3300031835\|Ga0318517_10004587	All Organisms → cellular organisms → Bacteria → Proteobacteria	4497	Open in IMG/M
3300031879\|Ga0306919_10934257	Not Available	664	Open in IMG/M
3300031880\|Ga0318544_10267126	All Organisms → cellular organisms → Bacteria	663	Open in IMG/M
3300031890\|Ga0306925_10001077	All Organisms → cellular organisms → Bacteria	21669	Open in IMG/M
3300031890\|Ga0306925_11112336	Not Available	798	Open in IMG/M
3300031894\|Ga0318522_10054122	All Organisms → cellular organisms → Bacteria	1423	Open in IMG/M
3300031897\|Ga0318520_10705931	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	630	Open in IMG/M
3300031910\|Ga0306923_10035947	All Organisms → cellular organisms → Bacteria	5378	Open in IMG/M
3300031910\|Ga0306923_10961598	All Organisms → cellular organisms → Bacteria	931	Open in IMG/M
3300031910\|Ga0306923_12001963	Not Available	588	Open in IMG/M
3300031912\|Ga0306921_10259407	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	2036	Open in IMG/M
3300031912\|Ga0306921_11734713	Not Available	674	Open in IMG/M
3300031912\|Ga0306921_12029455	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	612	Open in IMG/M
3300031945\|Ga0310913_11170869	Not Available	536	Open in IMG/M
3300031962\|Ga0307479_10242043	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1780	Open in IMG/M
3300032001\|Ga0306922_10006892	All Organisms → cellular organisms → Bacteria	10912	Open in IMG/M
3300032001\|Ga0306922_10898526	All Organisms → cellular organisms → Bacteria	920	Open in IMG/M
3300032051\|Ga0318532_10208031	All Organisms → cellular organisms → Bacteria	694	Open in IMG/M
3300032052\|Ga0318506_10023074	Not Available	2300	Open in IMG/M
3300032063\|Ga0318504_10112991	Not Available	1226	Open in IMG/M
3300032064\|Ga0318510_10115117	All Organisms → cellular organisms → Bacteria	1036	Open in IMG/M
3300032094\|Ga0318540_10130958	All Organisms → cellular organisms → Bacteria	1194	Open in IMG/M
3300032160\|Ga0311301_10000454	All Organisms → cellular organisms → Bacteria	152601	Open in IMG/M
3300032261\|Ga0306920_101914141	Not Available	833	Open in IMG/M
3300032783\|Ga0335079_10562616	Not Available	1208	Open in IMG/M
3300032805\|Ga0335078_10652225	All Organisms → cellular organisms → Bacteria	1316	Open in IMG/M
3300032805\|Ga0335078_11793299	All Organisms → cellular organisms → Bacteria	668	Open in IMG/M
3300032828\|Ga0335080_10079869	Not Available	3629	Open in IMG/M
3300032892\|Ga0335081_12358178	Not Available	555	Open in IMG/M
3300032892\|Ga0335081_12752542	Not Available	500	Open in IMG/M
3300032896\|Ga0335075_10057344	All Organisms → cellular organisms → Bacteria	5372	Open in IMG/M
3300033158\|Ga0335077_10310406	Not Available	1723	Open in IMG/M
3300033513\|Ga0316628_102189373	Not Available	733	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	96.99%
Aquatic	Environmental → Aquatic	3.01%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	96.99%
Freshwater	Environmental → Aquatic → Freshwater	3.01%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	86.47%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	6.77%
Loam	Environmental → Terrestrial → Soil → Loam	3.76%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	3.01%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	55.64%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	28.57%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	6.77%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	3.01%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.01%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.26%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.75%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	38.35%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	15.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	12.03%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	9.02%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	6.77%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	3.76%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	3.01%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	3.01%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.01%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.26%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.75%
Permafrost Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Permafrost Soil	0.75%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.75%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.75%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004267	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 6 MoBio	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005524	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen10_05102014_R1	Environmental	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005607	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen15_06102014_R2	Environmental	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300007819	Permafrost core soil microbial communities from Svalbard, Norway - sample 2-1-2 Soapdenovo	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009698	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300021046	Soil microbial communities from Shale Hills CZO, Pennsylvania, United States - 90cm depth	Environmental	Open in IMG/M
3300021086	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021151	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_06_16RNAfungal (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300026499	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-06-B	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027671	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes)	Environmental	Open in IMG/M
3300027706	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen15_06102014_R2 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300027968	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen10_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300030494	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG (v2)	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031894	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032051	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f26	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032896	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.4	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300033513	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D5_C	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0062387_1002081992	3300004091	Bog Forest Soil	MKIVGLLVCVLGWFIAVLSVKVPGVYAQLLTALAGFIVAGIGSLAILNRAHLKNAIWKA*
Ga0062389_1005077441	3300004092	Bog Forest Soil	DGMKIVGLLVCVLGWFIAVLSVKVPGVYAQLLTALAGFIVAGIGSLAILNRAHLKNAIWKA*
Ga0062389_1024375831	3300004092	Bog Forest Soil	IAVLSVKVPGVYAQLLVAAAGFVVAVFGAIGILNSAHLKNAIWKA*
Ga0062389_1039850201	3300004092	Bog Forest Soil	CVLGWFIAVLSVKVPGVYAQLLVAAAGLVVAVIGAVGILNSAHLKDAIWKA*
Ga0066396_101071701	3300004267	Tropical Forest Soil	MKILGLVVCVLGWFIAVLSTQVSGHPAQLLVALAGFLVACFGALYLVNGAHLKNAIWKA*
Ga0066388_1014129023	3300005332	Tropical Forest Soil	LKLLGLLIAVLGWFIAVLSVEVSGAYAQMLVALSGFVVAAIGVLAVLNRAHLKTAIWKA*
Ga0066388_1017265382	3300005332	Tropical Forest Soil	MKILGLIVCVLGWLTAVLSTQVSGRPAQLLVALAGFLVACFGALYLVNGAHLKNAIWKA*
Ga0066388_1041022562	3300005332	Tropical Forest Soil	MILKVIGLLVCLLGWLIAVSSVEVSGVYAQLVVALAGFIVAGVGALVIVNRAHLQDAIWKS*
Ga0070699_1016662822	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MKILGLLVCVLGWLIAVMSVKVPGVYVQLFVALAGFVVAGIGALAIVNGAHLKEAIWKA*
Ga0070737_100206412	3300005524	Surface Soil	MRVIGLLVCVLGWLIAVMSVKAPGVYAQLAVAAGGFIVALIGALAILNRFHLKDAIWKV*
Ga0070741_100046139	3300005529	Surface Soil	MRIVGLLVCILGWFIAILSIEVSGASAQLLVALAGFIVALIGALKLVNSAHLKNAIWKV*
Ga0070740_1000170127	3300005607	Surface Soil	MRIVGLLVCILGWFIAVLSIEVSGASAQLLVALAGFIVALIGALKLINGAHLKNAIWKV*
Ga0099791_103218081	3300007255	Vadose Zone Soil	MKIVGLLVCVLGWFIAVLSVKVPGVYVQLLVATAGLIVAAIGALAIVNRAHLKDAIWKV*
Ga0099791_105813642	3300007255	Vadose Zone Soil	MKILGLLVCVLGWLIAVMSVKVSGVYVQLLVALAGFAVTGIGALAIVNRAHLK
Ga0099794_100319862	3300007265	Vadose Zone Soil	MKILGLLVCVLGWLIAVMSVKVPGVYVQLFVALAGFAVTGIGALAIVNRAHLKEAIWKV*
Ga0104322_1381833	3300007819	Permafrost Soil	MKILGLLVCVLGWFIAVLSVKVPGVYAQLLVAAAGFVVAVFGSIGILNSAHLKDAIWKA*
Ga0066710_1013274402	3300009012	Grasslands Soil	REQMKIVGLLVCILGWLIAVLSVKVPGVYAQLLVAAAGFVVASIGALAIVNLAHLANAIWKA
Ga0099829_100209504	3300009038	Vadose Zone Soil	MKILGLLVCVLGWLIAVLSVKVPGVYLQLLVAAAGFVVAAIGALAIVNRAHLRDAIWKI*
Ga0099829_100281475	3300009038	Vadose Zone Soil	GWLIAVMSVKVPGVYVQLFVALAGFIVAAIGALAILNRAHLKDAIWKA*
Ga0099829_100298671	3300009038	Vadose Zone Soil	MKILGLLVCVLGWLIAVMSVKVPGVYVQLFVALAGFIVAAIGALAILNRAH
Ga0099829_103253582	3300009038	Vadose Zone Soil	MKSLGLLDCVLGWFIAVLSVKVPGVYAQLLVAAAGFVVAAIGALGIVNGAHLKNAIWKA*
Ga0099829_104281732	3300009038	Vadose Zone Soil	GWLIAVMSVKVPGVYVQLFVALAGFIVAAIGALAILNRAHLKEAIWKA*
Ga0099829_106070511	3300009038	Vadose Zone Soil	MKILGLLVCVLGWLIAVLSVKVPGVYAQLLVAAAGFVVAAIGALGIVNGAHLKDAIWKA*
Ga0099830_100717442	3300009088	Vadose Zone Soil	MKILGLLVCVLGWLIAVMSVKVPGVYVQLFVALAGFIVAAIGALAILNRAHLKDAIWKA*
Ga0099830_101139122	3300009088	Vadose Zone Soil	MKILGLLVCVLGWLIAVMSVKVPGVYVQLFVALAGFVVAAIGALAILNRAHLKDAIWKA*
Ga0099830_101315982	3300009088	Vadose Zone Soil	MKILGLLVCVLGWLIAVLSVKVPGVYAQLLVASAGFVVAAIGALAIVNRAHLNDAIWKA*
Ga0099830_102811781	3300009088	Vadose Zone Soil	MKILGLLVCVLGWFIAVLSVKVPGVYAQLLVATTGFVVAAIGALGILNSAHLKNAI
Ga0099830_115749551	3300009088	Vadose Zone Soil	MKILGLLVCVLGWLIAVLSVKVPGVYAQLLVALAGFVVALIGALAILNRAHLKDAIWKA*
Ga0099828_102359752	3300009089	Vadose Zone Soil	MKILGLLVCVLGWLIAVMSVKVPGVYVQLFVALAGFAVTGIGALAIVNRAHLKEAIWKA*
Ga0099828_112432482	3300009089	Vadose Zone Soil	MKILGLLVCLLGWLLAVMSVKVPGVYVQLLVAAAGVVVAAIGALKILNGAHLKDAIWKA*
Ga0099828_118783682	3300009089	Vadose Zone Soil	MKILGLLVCVLGWLIAVLSVKVPGVYLQLLVATAGFVVAAIGALAIVNRAHLRDAIWKV*
Ga0066709_1022575343	3300009137	Grasslands Soil	MKILGLLVCVLGGLIAVMCVKVPGVYAQVLVALAGLIVAATGALAIVN
Ga0116216_100057686	3300009698	Peatlands Soil	MIIKLVGLLVCVLGWLIAVSSVEVSGAYGQLAVATAGFIIAGIGALAIVNRAHLQDAIWKG*
Ga0126374_117524462	3300009792	Tropical Forest Soil	MKILGLVVCVLGWFIAVLSTQVSGHPAQLLVALAGFLVACFGALYLVNGAHLKSAIWKA*
Ga0126373_103547222	3300010048	Tropical Forest Soil	VALGDEQMKIVGLLVCVLGWLIAVMSVKVPGVYAQLLVAAAGFVVAAIGALAILNRAHLKDAIWKA*
Ga0126373_114263891	3300010048	Tropical Forest Soil	MKILGLIVCILGWLVAIMSTQVTGHSAQVLVALAGFLVSCFGALRLVNGAHLKDAIWKA*
Ga0126373_117647022	3300010048	Tropical Forest Soil	MKILGLLVCVLGWLIAVMSVKVPGVYAQLLVAAAGFVVAAIGALAIINRAHLKDAIWKA*
Ga0126370_100810864	3300010358	Tropical Forest Soil	DEMKILGLVVCVLGWFIAVLSTQVSGHSVQLLVALAGFLVACFGALYLVNGAHLKNAIWKA*
Ga0126378_114238752	3300010361	Tropical Forest Soil	VALGDEQMKIVGLLVCVLGWLIAVMSVKVPGVYAQLLIAAAGFVVAAIGALAILNRAHLRDAIWKA*
Ga0126378_123977682	3300010361	Tropical Forest Soil	IAVMSVKVPGVYAQLLVALAGFVVAAIGALAIVNRAHLKDAIWKA*
Ga0126381_1000461806	3300010376	Tropical Forest Soil	MKIVGLLVCVLGWLIAVMSVKVPGVYAQLLVAAAGFVVAAIGALAILNRAHLRDAIWKA*
Ga0136449_1004885022	3300010379	Peatlands Soil	MKILGLLVCVLGWFVAVLSVKVPGVYAQILLAALGFVVAATGALAIVNSAHLKDAIWKA*
Ga0137392_100214874	3300011269	Vadose Zone Soil	MKILGLLVCLLGWLLAVMSVKVPGVYVQVLVAVGGFVVAAIGALAIVNGAHLKDAIWKA*
Ga0137392_100390544	3300011269	Vadose Zone Soil	MKILGLLVCLLGWFIAVLSVKVPGVYAQLLVAAAGFVVAAIGALGIVNGAHLKNAIWKA*
Ga0137392_100477766	3300011269	Vadose Zone Soil	MKILGLLVCVLGWLIAVMSVKVPGVYVQLLVALAGFAVTGIGALAIVNRAHLK
Ga0137392_101669092	3300011269	Vadose Zone Soil	MKILGLLVCVLGWLIAVMSVKVPGVYMQLFVALAGFAVTGIGALAIVNRAHLKEAIWKA*
Ga0137392_102387942	3300011269	Vadose Zone Soil	MKILGLLVCVLGWLIAVLSVKVPGVYLQLLVAAAGFVVAAIGALAIVNRAHLRDAIWKV*
Ga0137391_103543852	3300011270	Vadose Zone Soil	MKILGLLVCVLGWFIAVLSVKVPGVYAQVLVAAAGFVVAAIGALGIVNGAHLKNAIWKA*
Ga0137391_104082561	3300011270	Vadose Zone Soil	MKILGLLVCVLGWLIAVMSVKVPGVYVQLFVALAGFVVAGIGALAIVNRAHLKEAIWKA*
Ga0137393_104723792	3300011271	Vadose Zone Soil	MKLLGLLVCLLGWLIAVLSVKVPGVYVQLLVAAAGLVVAAIGSLAIVNSAHLKDAIWKV*
Ga0137393_111226051	3300011271	Vadose Zone Soil	YEEANMKILGLLVCLLGWLLAVMSVKVPGVYVQVLVAVGGFVVAAIGALAIVNGAHLKDAIWKA*
Ga0137389_101458523	3300012096	Vadose Zone Soil	MKILGLLVCVLGWFIAVLSVKVPGVYAQLLVAAAGFVVAAIGALGIVNGAHLKNAIWKA*
Ga0137388_101314861	3300012189	Vadose Zone Soil	MKILGLLVCVLGWLIAVMSVKVPGVYVQLFVALAGFVVAGIGALAIVNRAPLKEAIWKA*
Ga0137388_107401981	3300012189	Vadose Zone Soil	MKILGLLVCVLGWLIAVLSVKVPGVYLQLLVAAAGFVVAAIGALAIVN
Ga0137388_112906472	3300012189	Vadose Zone Soil	MKILGLLVCLLGWLLAVMSVKVPGVYVQVLVAVGGFVVAAIGALAILNGAHLKDAIWRT*
Ga0137363_108814732	3300012202	Vadose Zone Soil	KILGLLVCVLGWFIAVLSVKVPGVYAQLLVALAGFVVALIGALAILNGAHLKDAIWKA*
Ga0137362_100573164	3300012205	Vadose Zone Soil	MKILGLLVCVLGWLIAVMSVKVPGVYVQLFVALAGFLVAAIGALAILNRAHLKDAIWKA*
Ga0137362_106747552	3300012205	Vadose Zone Soil	MMKVFGLLVCVLGWFIAVLSVKVPGVYAQLLVALAGFVVAAIGALAIVNRAHLKNAIWKA
Ga0137377_113469421	3300012211	Vadose Zone Soil	MGEKRMKIRGRLVCVPGWLIAVMCVKVPGVYAQMLVALAGFIVAAIGALAIVNRAHLKDAIWKA*
Ga0137377_114688231	3300012211	Vadose Zone Soil	MKIVGLLVCVLGWLIAVLSVKVPGVYAQLLVAAAGFVVASIGALAIVNRAHLANAIWKA*
Ga0137360_101968452	3300012361	Vadose Zone Soil	MKILGLLVCVLGWFIAVLSVKVPGVYAQLLVALAGFVVALIGALAILNGAHLKDAIWKA*
Ga0137360_105307362	3300012361	Vadose Zone Soil	MKIVGLLVCVLGWFIAVLSVKVPGVYVQMLVALAGFIVAAIGALAIVNGAHLKNAIWKV*
Ga0137390_117889432	3300012363	Vadose Zone Soil	MKILGLLVCVLGWFIAVLSVKVTGVYAQVLVAAAGFVVAAIGALGIVNGAHLKNAIWKA*
Ga0137359_107650351	3300012923	Vadose Zone Soil	MKILGLLVCVLGWFIAVLSVKVPGVYAQLLVALAGFVVALIGALAILNVAH
Ga0137359_112664792	3300012923	Vadose Zone Soil	GWLIAVLCVKVPGVYAQLLVALAGFVVALIGALAILNGAHLKNAIWKA*
Ga0137409_101970502	3300015245	Vadose Zone Soil	MKILGLLVCVLGWLIAVLCVKVPGVYAQLLVALAGFVVALIGALAILNGAHLKDAIWKA*
Ga0182036_103349501	3300016270	Soil	MSHSREKKMQRVIGLIVCVLGWLIAVMSVKVPGVHAQLLLAAGGFVIAALGALAIVNRYHLKNAIWKA
Ga0182036_118361032	3300016270	Soil	MKILGLVVCVLGWFIAVLSTQVSGHPTQLLVALAGFLVACFGALYLVNGAHLKNAIWKA
Ga0182033_112475272	3300016319	Soil	MKILGLIVCVLGWLIAVLSTQVSGHPAQLLVASAGFLVACFGALYLVNGAHLKDAIWKA
Ga0182033_116610371	3300016319	Soil	MKILGLLVCLLGWLLAVMSIKVPGVYLQMLVATGGFIVAAIGALAIVNGA
Ga0182035_110553872	3300016341	Soil	MKILGLLVCVLGWLIAVLSVKVPGVYVQLAVATLGVVVATIGALALVNRAHLKDAIWKA
Ga0182032_101197952	3300016357	Soil	MKILGLLVCVLGWLIAVMSVKVPGVYAQLLVAAAGFVVAAIGALAIVNRAHLKDAIWKA
Ga0182034_103634511	3300016371	Soil	KGMKILGLLVCVLGWLIAVMSVKVPGVYAQLLVAAAGFLVAAIGALAIVNRAHLKDAIWK
Ga0182040_108543542	3300016387	Soil	GLLVCVLGWLIAVMSVKVPGVYAQLLVAAAGFLVAAIGALAIVNRAHLKDAIWKA
Ga0182040_112907791	3300016387	Soil	MKILGLVVCVLGWLIAVMSVKVPGVYAQLLVAAAGFLVAAIGALEIVNRAHLKDAIWKA
Ga0215015_103417662	3300021046	Soil	MKILGLLVCVLGWLIAVMSVKVPGVYVQLLVAAAGFVVAAIGALAIVNGAHLKEAIWKA
Ga0179596_105630872	3300021086	Vadose Zone Soil	MKILGLLVCVLGWLIAVMSVKVPGVYVQLFVALAGFIVAAIGALAILNRAHLKDAIWKA
Ga0179584_10889541	3300021151	Vadose Zone Soil	ADSRNQFWRGNMKILGLLVCVLGWFIAVLSVKVPGAYAQLLVALAGFVVALIGAFGILNGAHLKDAIWKA
Ga0126371_102015743	3300021560	Tropical Forest Soil	MKVLGLLICVLGWLIAVSSVEVSGVYAQLGVAAAGFIIAGIGALAILNRAHLQDAIWKS
Ga0126371_115514602	3300021560	Tropical Forest Soil	MKILGLVVCVLGWFIAVLSTQVSGHPAQLLVALAGFLVACFGALYLVNGAHLKNAIWKA
Ga0126371_116752312	3300021560	Tropical Forest Soil	MKILGLLVCVLGWFIAVLSVKVPGVYVQLAVATLGVVVAALGALALVNRAHLKDAIWKA
Ga0126371_134289682	3300021560	Tropical Forest Soil	WLIAVMSVKMPGVYAQLLVAAAGFVVAAIGALAIVNRAHLKEAIWRA
Ga0257181_10683141	3300026499	Soil	EPMKILGLLVCVLGWLIAVMSVKVPGVYMQLFVALAGFAVTGIGALAIVNRAHLKEAIWK
Ga0209648_100656065	3300026551	Grasslands Soil	LGWLIAVMSVKVPGVYVQLFVALAGFIVAAIGALAILNRAHLKDAIWKA
Ga0179587_103147543	3300026557	Vadose Zone Soil	MKIVGLLVCVLGWFIAVLSVKVPGVYVQLLVATAGLIVAAIGALAIVNRAHLKDA
Ga0209588_11624253	3300027671	Vadose Zone Soil	MKILGLLVCVLGWLIAVMSVKVPGVYVQLFVALAGFAVTGIGALAIVNRAHLKEAIWKA
Ga0209581_10157224	3300027706	Surface Soil	MRIVGLLVCILGWFIAVLSIEVSGASAQLLVALAGFIVALIGALKLINGAHLKNAIWKV
Ga0209180_102004011	3300027846	Vadose Zone Soil	VMSVKVPGVYVQLFVALAGFIVAAIGALAILNRAHLKEAIWKA
Ga0209180_102747901	3300027846	Vadose Zone Soil	MKILGLLVCVLGWLIAVMSVKVPGVYVQLFVALAGFVVAAIGALAILNRAHLKDAIWKA
Ga0209180_103399783	3300027846	Vadose Zone Soil	MKILGLLVCLLGWLLAVMSVKVPGVYVQVLVAVGGFVVAAIGALAIVNGAHLKDAIWKA
Ga0209283_108422902	3300027875	Vadose Zone Soil	MKILGLLVCLLGWLLAVMSVKVPGVYVQLLVAAAGVVVAAIGALKILNGAHLKDAIWKA
Ga0209488_103512492	3300027903	Vadose Zone Soil	MKSLGLLVCVLGWLIAVMSVKVPGVYVQLFVALAGFIVAAIGALAILNRAHLNDAIWKA
Ga0209061_10345502	3300027968	Surface Soil	MRVIGLLVCVLGWLIAVMSVKAPGVYAQLAVAAGGFIVALIGALAILNRFHLKDAIWKV
Ga0137415_107516382	3300028536	Vadose Zone Soil	MKIVGLLVCVLGWFIAVLSVKVPGVYVQLLVATAGLIVAAIGALAIVNRAHLKDAIWKV
Ga0310037_100456072	3300030494	Peatlands Soil	MIIKLVGLLVCVLAWLIAVSSVEVSGAYGQLAVATAGFIIAGIGALAIVNRAHLQDAIWK
Ga0318538_104496371	3300031546	Soil	LIVCVLGWLIAVMSVKVPGVHAQLLLAAGGFVIAALGALAIVNRYHLKNAIWKA
Ga0310915_102409312	3300031573	Soil	MKILGLVVCVLGWLIAVMSVKVPGVYAQLLVAAAGFVVAAIGALAIVNRAHLKDAIWKA
Ga0318546_110532222	3300031771	Soil	MKILGLIVCVLGWFIAVLSTQVSGHPAQLLVALAGFLVACFGALYLVNGAHLKNAIWKP
Ga0318576_100165811	3300031796	Soil	MPFKVIGLLVCVLGWFISVLSVEVSGVYAQLIVALAGFLVAGVGALVIVNRGHLQEAIWKAK
Ga0318567_101433004	3300031821	Soil	MPFKVIGLLVCVLGWFISVLSVEVSGVYAQLIVALAGFLVAGVGALVIVNRGHLQEAIWK
Ga0318517_100045876	3300031835	Soil	MPFKVIGLLVCVLGWFISVLSVEVSGVYAQLIVALAGFLGAGVGALVIVNRGHLQEAIWKAKS
Ga0306919_109342572	3300031879	Soil	MKILGLLVCVLGWLIAVMSVKVPGVYAQLLVAAAGFVLAAIGALAIVNRAHLKDAIWKA
Ga0318544_102671261	3300031880	Soil	CVLGWFISVLSVEVSGVYAQLIVALAGFLVAGVGALVIVNRGHLQEAIWKAKS
Ga0306925_100010779	3300031890	Soil	MPFKVIGLLVCVLGWFISVLSVEVSGVYAQLIVALAGFLVAGVGALVIVNRGHLQEAIWKAKS
Ga0306925_111123362	3300031890	Soil	MKIVGLLVCLLGWFIAVLSVKVPGVYVQLLVAFGGFVVAAIGALAIVNGAHLKDAIWKA
Ga0318522_100541221	3300031894	Soil	MPFKVIGRLVCVLGWFISVLSVEVSGVYAQLIVALAGFLVAGVGALVIVNRGHLQEAIWKAKS
Ga0318520_107059311	3300031897	Soil	VCVLGWLIAVMSVKVPGVYAQLLVAAAGFVVAAIGALAIVNRAHLKDAIWKA
Ga0306923_100359477	3300031910	Soil	MKILGLVVCVLGWLIAVMSVKVPGVYAQLLVAAAGFVLAAIGALAIVNRAHLKDAIWKA
Ga0306923_109615982	3300031910	Soil	CVLGWLIAVLSVKVPGVYVQLVIATLGVVVAAIGALAIVNRAHLKDAIWKA
Ga0306923_120019632	3300031910	Soil	MQRVIGLIVCVLGWLIAVMSVKVPGVHAQLLLAAGGFVIAALGALAIVNRYHLKNAIWK
Ga0306921_102594075	3300031912	Soil	MKIVGLLVCLLGWFIAVLSVKVPGVYVQLLVAFGGFVVAVIGALAIVNGAHLKDAIWKA
Ga0306921_117347131	3300031912	Soil	MQRVIGLIVCVLGWLIAVMSVKVPGVHAQLLLAAGGFVIAALGALAIVNRYHLKNAIWKA
Ga0306921_120294552	3300031912	Soil	MILKVIGLLVCILGWLIAVSSVEVSGVYAQLVVALAGFIVAGVGALVIVNRAHLQDAIWK
Ga0310913_111708691	3300031945	Soil	MKILGLLVCVLGWLIAVMSVKVPGVYAQLLVAAAGFLVAAIGALAIVN
Ga0307479_102420433	3300031962	Hardwood Forest Soil	MKILGLLVCVLGWLIAVMSVKVPGVYVQLLVAAAGFVVAAIGALAIVNGAHLKEAVWKA
Ga0306922_100068921	3300032001	Soil	LVCVLGWFISVLSVEVSGVYAQLIVALAGFLVAGVGALVIVNRGHLQEAIWKAKS
Ga0306922_108985262	3300032001	Soil	MKILGLLVCLLGWLLAVMSIKVPGVYLQMLVATGGFIVAAIGALAIVNGAHLKDANWKA
Ga0318532_102080311	3300032051	Soil	VLGWFISVLSVEVSGVYAQLIVALAGFLVAGVGALVIVNRGHLQEAIWKAKS
Ga0318506_100230741	3300032052	Soil	LLVCVLGWFISVLSVEVSGVYAQLIVALAGFLVAGVGALVIVNRGHLQEAIWKAKS
Ga0318504_101129914	3300032063	Soil	MPFKVIGLLVCVLGWFISVLSVEVSGVYAQLIVALAGFLVAGVGALVIVNRGHLQEAI
Ga0318510_101151172	3300032064	Soil	VMPFKVIGLLVCVLGWFISVLSVEVSGVYAQLIVALAGFLVAGVGALVIVNRGHLQEAIWKAKS
Ga0318540_101309582	3300032094	Soil	MPFKVIGLLVCILGWFISVLSVEVSGVYAQLIVALAGFLVAGVGALVIVNRGHLQEAIWKAKS
Ga0311301_1000045411	3300032160	Peatlands Soil	MIIKLVGLLVCVLGWLIAVSSVEVSGAYGQLAVATAGFIIAGIGALAIVNRAHLQDAIWK
Ga0306920_1019141412	3300032261	Soil	MKILGLLVCVLGWLIAVMSVKVPGVYAQLLVAAAGFLVAAIGALAIVNRAHLKDAIWKA
Ga0335079_105626162	3300032783	Soil	MTLRVLGLLVCILGWFIAVLSVEISGVYAQLLVALAGFVTAGIGALAIVNRGHLQEAIWK
Ga0335078_106522252	3300032805	Soil	MKIIGLLVCVLGWFIAVLSVEVSGVGAQLLVALAGFLVACFGACKLVNGAHLKNAIWKV
Ga0335078_117932992	3300032805	Soil	KIVGLIVCVLGWFVAVLSVEVSGIGAQLLVATAGFVVACFGALYLVNGAHLKNAIWKA
Ga0335080_100798694	3300032828	Soil	MTLRVLGLLVCILGWFIAVLSVEISGVYAQLLVALAGFVTAGIGALAIVNRGHLQEAIWKGKG
Ga0335081_123581782	3300032892	Soil	MKILGLLVCILGWFIAVLSVEVSGVGAQLLVALAGFLMACFGALKLVNGAHLKNA
Ga0335081_127525422	3300032892	Soil	MKILGLLVCILGWFIAVLSVKVPGVYAQMLVAVAGFIVAAIGALGILNAAHLKDAIWKA
Ga0335075_100573446	3300032896	Soil	MKIAGLIVCVLGWLIAVMSVKVPGVYLQLLIALVGFIVAGIGACAIVNRAHLKNAIWKA
Ga0335077_103104062	3300033158	Soil	MALKIIGLLVCVLGWFIAVLSVEVSGVYGQLFVALAGFVVAAIGVLAVVNRGHLQDAIWKGKS
Ga0316628_1021893731	3300033513	Soil	MKIVGLLVCVLGWFVAVLSVKVPGVYAQILVAALGFVVAAIGALAIVNSAHLKEAIWKV

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F059670

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences