NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F059463

Metagenome / Metatranscriptome Family F059463

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F059463
Family Type Metagenome / Metatranscriptome
Number of Sequences 134
Average Sequence Length 74 residues
Representative Sequence DIQAAMIDQVQRAHALYSADGTFRSAQLEVKLTIERALELMSTFLGAARDLEDENADKIVLTMFAHPPAN
Number of Associated Samples 116
Number of Associated Scaffolds 134

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 4.48 %
% of genes near scaffold ends (potentially truncated) 95.52 %
% of genes from short scaffolds (< 2000 bps) 91.79 %
Associated GOLD sequencing projects 110
AlphaFold2 3D model prediction Yes
3D model pTM-score0.62

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (100.000 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(32.836 % of family members)
Environment Ontology (ENVO) Unclassified
(32.836 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(64.925 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 36.73%    β-sheet: 0.00%    Coil/Unstructured: 63.27%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.62
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 134 Family Scaffolds
PF05175MTS 10.45
PF00108Thiolase_N 3.73
PF04828GFA 2.24
PF04851ResIII 1.49
PF00583Acetyltransf_1 1.49
PF13365Trypsin_2 1.49
PF12847Methyltransf_18 0.75
PF12697Abhydrolase_6 0.75
PF02734Dak2 0.75
PF03816LytR_cpsA_psr 0.75
PF13432TPR_16 0.75
PF13428TPR_14 0.75
PF14748P5CR_dimer 0.75
PF01182Glucosamine_iso 0.75
PF13659Obsolete Pfam Family 0.75
PF12840HTH_20 0.75

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 134 Family Scaffolds
COG0183Acetyl-CoA acetyltransferaseLipid transport and metabolism [I] 3.73
COG3791Uncharacterized conserved proteinFunction unknown [S] 2.24
COG03636-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminaseCarbohydrate transport and metabolism [G] 0.75
COG1316Anionic cell wall polymer biosynthesis enzyme TagV/TagU, LytR-Cps2A-Psr (LCP) family (peptidoglycan teichoic acid transferase)Cell wall/membrane/envelope biogenesis [M] 0.75

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms100.00 %
UnclassifiedrootN/A0.00 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000363|ICChiseqgaiiFebDRAFT_14249517All Organisms → cellular organisms → Bacteria568Open in IMG/M
3300000956|JGI10216J12902_120981146All Organisms → cellular organisms → Bacteria755Open in IMG/M
3300001431|F14TB_101499418All Organisms → cellular organisms → Bacteria1023Open in IMG/M
3300001686|C688J18823_10704117All Organisms → cellular organisms → Bacteria643Open in IMG/M
3300004114|Ga0062593_100143251All Organisms → cellular organisms → Bacteria1795Open in IMG/M
3300004479|Ga0062595_100255156All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1141Open in IMG/M
3300004479|Ga0062595_102481359All Organisms → cellular organisms → Bacteria516Open in IMG/M
3300004480|Ga0062592_102104035All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium560Open in IMG/M
3300005093|Ga0062594_100696326All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium916Open in IMG/M
3300005104|Ga0066818_1027198All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium503Open in IMG/M
3300005177|Ga0066690_10395431All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium938Open in IMG/M
3300005178|Ga0066688_10207230All Organisms → cellular organisms → Bacteria1246Open in IMG/M
3300005179|Ga0066684_10660182All Organisms → cellular organisms → Bacteria702Open in IMG/M
3300005179|Ga0066684_10727356All Organisms → cellular organisms → Bacteria662Open in IMG/M
3300005186|Ga0066676_10503836All Organisms → cellular organisms → Bacteria822Open in IMG/M
3300005187|Ga0066675_10829804All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium699Open in IMG/M
3300005330|Ga0070690_100503956All Organisms → cellular organisms → Bacteria906Open in IMG/M
3300005438|Ga0070701_10213276All Organisms → cellular organisms → Bacteria1147Open in IMG/M
3300005445|Ga0070708_100171270All Organisms → cellular organisms → Bacteria2027Open in IMG/M
3300005447|Ga0066689_10463546All Organisms → cellular organisms → Bacteria796Open in IMG/M
3300005458|Ga0070681_10816371All Organisms → cellular organisms → Bacteria850Open in IMG/M
3300005467|Ga0070706_101467550All Organisms → cellular organisms → Bacteria624Open in IMG/M
3300005526|Ga0073909_10272945All Organisms → cellular organisms → Bacteria759Open in IMG/M
3300005555|Ga0066692_10434449All Organisms → cellular organisms → Bacteria835Open in IMG/M
3300005556|Ga0066707_10679040All Organisms → cellular organisms → Bacteria648Open in IMG/M
3300005561|Ga0066699_10731634All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium703Open in IMG/M
3300005598|Ga0066706_10732881All Organisms → cellular organisms → Bacteria784Open in IMG/M
3300005615|Ga0070702_100269957All Organisms → cellular organisms → Bacteria1163Open in IMG/M
3300006032|Ga0066696_10829545All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium589Open in IMG/M
3300006755|Ga0079222_11138622All Organisms → cellular organisms → Bacteria690Open in IMG/M
3300006797|Ga0066659_11714499All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium530Open in IMG/M
3300006800|Ga0066660_11540335All Organisms → cellular organisms → Bacteria525Open in IMG/M
3300006854|Ga0075425_102038357All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium641Open in IMG/M
3300006904|Ga0075424_102552141All Organisms → cellular organisms → Bacteria535Open in IMG/M
3300007255|Ga0099791_10477669All Organisms → cellular organisms → Bacteria604Open in IMG/M
3300009089|Ga0099828_11840720All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium531Open in IMG/M
3300009090|Ga0099827_10350267All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1256Open in IMG/M
3300009090|Ga0099827_11345091All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium622Open in IMG/M
3300009090|Ga0099827_11733278All Organisms → cellular organisms → Bacteria544Open in IMG/M
3300009137|Ga0066709_100237364All Organisms → cellular organisms → Bacteria2429Open in IMG/M
3300009137|Ga0066709_104160382All Organisms → cellular organisms → Bacteria527Open in IMG/M
3300009137|Ga0066709_104419041All Organisms → cellular organisms → Bacteria513Open in IMG/M
3300009162|Ga0075423_12047778All Organisms → cellular organisms → Bacteria620Open in IMG/M
3300009818|Ga0105072_1020528All Organisms → cellular organisms → Bacteria1204Open in IMG/M
3300010046|Ga0126384_12465133All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium504Open in IMG/M
3300010326|Ga0134065_10139314All Organisms → cellular organisms → Bacteria838Open in IMG/M
3300010333|Ga0134080_10236863All Organisms → cellular organisms → Bacteria801Open in IMG/M
3300010373|Ga0134128_10875290All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium995Open in IMG/M
3300010373|Ga0134128_11842420All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium666Open in IMG/M
3300010403|Ga0134123_13411688All Organisms → cellular organisms → Bacteria513Open in IMG/M
3300011971|Ga0120175_1035140All Organisms → cellular organisms → Bacteria586Open in IMG/M
3300011994|Ga0120157_1022609All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1510Open in IMG/M
3300011996|Ga0120156_1000997All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria9613Open in IMG/M
3300012004|Ga0120134_1043522All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium766Open in IMG/M
3300012209|Ga0137379_10866209All Organisms → cellular organisms → Bacteria808Open in IMG/M
3300012211|Ga0137377_11377079All Organisms → cellular organisms → Bacteria634Open in IMG/M
3300012353|Ga0137367_11058478All Organisms → cellular organisms → Bacteria550Open in IMG/M
3300012356|Ga0137371_10852616All Organisms → cellular organisms → Bacteria693Open in IMG/M
3300012357|Ga0137384_11361205All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium557Open in IMG/M
3300012361|Ga0137360_10855254All Organisms → cellular organisms → Bacteria783Open in IMG/M
3300012532|Ga0137373_11143850All Organisms → cellular organisms → Bacteria553Open in IMG/M
3300012905|Ga0157296_10271983All Organisms → cellular organisms → Bacteria579Open in IMG/M
3300012955|Ga0164298_10141323All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1339Open in IMG/M
3300012961|Ga0164302_10360237All Organisms → cellular organisms → Bacteria976Open in IMG/M
3300012972|Ga0134077_10307842All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium667Open in IMG/M
3300012985|Ga0164308_11605511All Organisms → cellular organisms → Bacteria600Open in IMG/M
3300012986|Ga0164304_10611575All Organisms → cellular organisms → Bacteria815Open in IMG/M
3300012988|Ga0164306_10283570All Organisms → cellular organisms → Bacteria1201Open in IMG/M
3300012988|Ga0164306_10669216All Organisms → cellular organisms → Bacteria821Open in IMG/M
3300013501|Ga0120154_1005260All Organisms → cellular organisms → Bacteria3900Open in IMG/M
3300015209|Ga0167629_1014935All Organisms → cellular organisms → Bacteria2890Open in IMG/M
3300015264|Ga0137403_11165720All Organisms → cellular organisms → Bacteria616Open in IMG/M
3300017657|Ga0134074_1413637All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium501Open in IMG/M
3300018071|Ga0184618_10034666All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1756Open in IMG/M
3300018466|Ga0190268_11535734All Organisms → cellular organisms → Bacteria581Open in IMG/M
3300019255|Ga0184643_1291991All Organisms → cellular organisms → Bacteria510Open in IMG/M
3300019279|Ga0184642_1025245All Organisms → cellular organisms → Bacteria908Open in IMG/M
3300019356|Ga0173481_10848708All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium510Open in IMG/M
3300019867|Ga0193704_1006863All Organisms → cellular organisms → Bacteria2272Open in IMG/M
3300019873|Ga0193700_1025125All Organisms → cellular organisms → Bacteria984Open in IMG/M
3300019885|Ga0193747_1011115All Organisms → cellular organisms → Bacteria2173Open in IMG/M
3300020012|Ga0193732_1067986All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium592Open in IMG/M
3300020059|Ga0193745_1095926All Organisms → cellular organisms → Bacteria635Open in IMG/M
3300021078|Ga0210381_10235937All Organisms → cellular organisms → Bacteria647Open in IMG/M
3300021080|Ga0210382_10119152All Organisms → cellular organisms → Bacteria1113Open in IMG/M
3300022534|Ga0224452_1040917All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1361Open in IMG/M
3300022756|Ga0222622_10152891All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1490Open in IMG/M
3300025899|Ga0207642_10632267All Organisms → cellular organisms → Bacteria669Open in IMG/M
3300025922|Ga0207646_10176982All Organisms → cellular organisms → Bacteria1927Open in IMG/M
3300025923|Ga0207681_10503632All Organisms → cellular organisms → Bacteria992Open in IMG/M
3300025934|Ga0207686_11687824All Organisms → cellular organisms → Bacteria524Open in IMG/M
3300026095|Ga0207676_11935187All Organisms → cellular organisms → Bacteria588Open in IMG/M
3300026309|Ga0209055_1124496All Organisms → cellular organisms → Bacteria969Open in IMG/M
3300026330|Ga0209473_1267743All Organisms → cellular organisms → Bacteria579Open in IMG/M
3300026332|Ga0209803_1200516All Organisms → cellular organisms → Bacteria735Open in IMG/M
3300026550|Ga0209474_10137022All Organisms → cellular organisms → Bacteria1607Open in IMG/M
3300026550|Ga0209474_10635529All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla548Open in IMG/M
3300026552|Ga0209577_10389895All Organisms → cellular organisms → Bacteria1008Open in IMG/M
3300026850|Ga0208892_1004595All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium609Open in IMG/M
3300027379|Ga0209842_1072653All Organisms → cellular organisms → Bacteria604Open in IMG/M
3300027775|Ga0209177_10173804All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium748Open in IMG/M
3300027882|Ga0209590_10536223All Organisms → cellular organisms → Bacteria755Open in IMG/M
3300028705|Ga0307276_10068349All Organisms → cellular organisms → Bacteria817Open in IMG/M
3300028705|Ga0307276_10099050All Organisms → cellular organisms → Bacteria703Open in IMG/M
3300028707|Ga0307291_1163397All Organisms → cellular organisms → Bacteria569Open in IMG/M
3300028710|Ga0307322_10096623All Organisms → cellular organisms → Bacteria756Open in IMG/M
3300028715|Ga0307313_10220536All Organisms → cellular organisms → Bacteria589Open in IMG/M
3300028716|Ga0307311_10096418All Organisms → cellular organisms → Bacteria823Open in IMG/M
3300028718|Ga0307307_10013463All Organisms → cellular organisms → Bacteria2202Open in IMG/M
3300028718|Ga0307307_10029232All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1558Open in IMG/M
3300028718|Ga0307307_10305902All Organisms → cellular organisms → Bacteria512Open in IMG/M
3300028721|Ga0307315_10168730All Organisms → cellular organisms → Bacteria670Open in IMG/M
3300028744|Ga0307318_10118238All Organisms → cellular organisms → Bacteria902Open in IMG/M
3300028768|Ga0307280_10374101All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium528Open in IMG/M
3300028782|Ga0307306_10209992All Organisms → cellular organisms → Bacteria560Open in IMG/M
3300028784|Ga0307282_10369184All Organisms → cellular organisms → Bacteria694Open in IMG/M
3300028787|Ga0307323_10000862All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria9509Open in IMG/M
3300028787|Ga0307323_10044712All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1555Open in IMG/M
3300028787|Ga0307323_10174975All Organisms → cellular organisms → Bacteria775Open in IMG/M
3300028793|Ga0307299_10199738All Organisms → cellular organisms → Bacteria752Open in IMG/M
3300028793|Ga0307299_10250971All Organisms → cellular organisms → Bacteria665Open in IMG/M
3300028799|Ga0307284_10187533All Organisms → cellular organisms → Bacteria809Open in IMG/M
3300028799|Ga0307284_10467939All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium516Open in IMG/M
3300028803|Ga0307281_10095457All Organisms → cellular organisms → Bacteria994Open in IMG/M
3300028814|Ga0307302_10513620All Organisms → cellular organisms → Bacteria595Open in IMG/M
3300028819|Ga0307296_10575221All Organisms → cellular organisms → Bacteria617Open in IMG/M
3300028824|Ga0307310_10503506All Organisms → cellular organisms → Bacteria610Open in IMG/M
3300028876|Ga0307286_10393283All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium519Open in IMG/M
3300028884|Ga0307308_10000221All Organisms → cellular organisms → Bacteria18754Open in IMG/M
3300028884|Ga0307308_10430785All Organisms → cellular organisms → Bacteria632Open in IMG/M
3300028884|Ga0307308_10533667All Organisms → cellular organisms → Bacteria563Open in IMG/M
3300030510|Ga0268243_1147362All Organisms → cellular organisms → Bacteria568Open in IMG/M
3300031226|Ga0307497_10010406All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2626Open in IMG/M
3300031799|Ga0318565_10537694All Organisms → cellular organisms → Bacteria563Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil32.84%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil16.42%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil10.45%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil3.73%
PermafrostEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost3.73%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere3.73%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment2.99%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil2.99%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil2.24%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil2.24%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil2.24%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere2.24%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment1.49%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil1.49%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil1.49%
Groundwater SandEnvironmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand1.49%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment0.75%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil0.75%
Glacier Forefield SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil0.75%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil0.75%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil0.75%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere0.75%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere0.75%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.75%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere0.75%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.75%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere0.75%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000363Soil microbial communities from Great Prairies - Iowa, Continuous Corn soilEnvironmentalOpen in IMG/M
3300000956Soil microbial communities from Great Prairies - Kansas, Native Prairie soilEnvironmentalOpen in IMG/M
3300001431Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemlyEnvironmentalOpen in IMG/M
3300001686Grasslands soil microbial communities from Hopland, California, USAEnvironmentalOpen in IMG/M
3300004114Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5EnvironmentalOpen in IMG/M
3300004479Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAsEnvironmentalOpen in IMG/M
3300004480Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4EnvironmentalOpen in IMG/M
3300005093Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All BlocksEnvironmentalOpen in IMG/M
3300005104Soil and rhizosphere microbial communities from Laval, Canada - mgHACEnvironmentalOpen in IMG/M
3300005177Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139EnvironmentalOpen in IMG/M
3300005178Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137EnvironmentalOpen in IMG/M
3300005179Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133EnvironmentalOpen in IMG/M
3300005186Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125EnvironmentalOpen in IMG/M
3300005187Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124EnvironmentalOpen in IMG/M
3300005330Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaGEnvironmentalOpen in IMG/M
3300005438Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaGEnvironmentalOpen in IMG/M
3300005445Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaGEnvironmentalOpen in IMG/M
3300005447Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138EnvironmentalOpen in IMG/M
3300005458Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaGEnvironmentalOpen in IMG/M
3300005467Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaGEnvironmentalOpen in IMG/M
3300005526Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1EnvironmentalOpen in IMG/M
3300005555Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141EnvironmentalOpen in IMG/M
3300005556Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156EnvironmentalOpen in IMG/M
3300005561Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148EnvironmentalOpen in IMG/M
3300005598Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155EnvironmentalOpen in IMG/M
3300005615Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaGEnvironmentalOpen in IMG/M
3300006032Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145EnvironmentalOpen in IMG/M
3300006755Agricultural soil microbial communities from Georgia to study Nitrogen management - GA PlitterEnvironmentalOpen in IMG/M
3300006797Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108EnvironmentalOpen in IMG/M
3300006800Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109EnvironmentalOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300006904Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3Host-AssociatedOpen in IMG/M
3300007255Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1EnvironmentalOpen in IMG/M
3300009089Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaGEnvironmentalOpen in IMG/M
3300009090Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaGEnvironmentalOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300009162Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2Host-AssociatedOpen in IMG/M
3300009818Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_30_40EnvironmentalOpen in IMG/M
3300010046Tropical forest soil microbial communities from Panama - MetaG Plot_36EnvironmentalOpen in IMG/M
3300010326Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300010333Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300010373Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4EnvironmentalOpen in IMG/M
3300010403Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3EnvironmentalOpen in IMG/M
3300011971Permafrost microbial communities from Nunavut, Canada - A7_80cm_12MEnvironmentalOpen in IMG/M
3300011994Permafrost microbial communities from Nunavut, Canada - A7_65cm_12MEnvironmentalOpen in IMG/M
3300011996Permafrost microbial communities from Nunavut, Canada - A39_65cm_12MEnvironmentalOpen in IMG/M
3300012004Permafrost microbial communities from Nunavut, Canada - A30_5cm_6MEnvironmentalOpen in IMG/M
3300012209Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaGEnvironmentalOpen in IMG/M
3300012211Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012353Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaGEnvironmentalOpen in IMG/M
3300012356Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaGEnvironmentalOpen in IMG/M
3300012357Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaGEnvironmentalOpen in IMG/M
3300012361Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaGEnvironmentalOpen in IMG/M
3300012532Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaGEnvironmentalOpen in IMG/M
3300012905Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S013-104B-2EnvironmentalOpen in IMG/M
3300012955Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MGEnvironmentalOpen in IMG/M
3300012961Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MGEnvironmentalOpen in IMG/M
3300012972Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300012985Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MGEnvironmentalOpen in IMG/M
3300012986Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MGEnvironmentalOpen in IMG/M
3300012988Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MGEnvironmentalOpen in IMG/M
3300013501Permafrost microbial communities from Nunavut, Canada - A35_65cm_0.25MEnvironmentalOpen in IMG/M
3300015209Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G3B, Proglacial river margin, by glacier terminus)EnvironmentalOpen in IMG/M
3300015264Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300017657Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09212015EnvironmentalOpen in IMG/M
3300018071Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1EnvironmentalOpen in IMG/M
3300018466Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 TEnvironmentalOpen in IMG/M
3300019255Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019279Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019356Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)EnvironmentalOpen in IMG/M
3300019867Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3m1EnvironmentalOpen in IMG/M
3300019873Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3s1EnvironmentalOpen in IMG/M
3300019885Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1m2EnvironmentalOpen in IMG/M
3300020012Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1s1EnvironmentalOpen in IMG/M
3300020059Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1a2EnvironmentalOpen in IMG/M
3300021078Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_coex redoEnvironmentalOpen in IMG/M
3300021080Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redoEnvironmentalOpen in IMG/M
3300022534Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_b1EnvironmentalOpen in IMG/M
3300022756Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1EnvironmentalOpen in IMG/M
3300025899Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025922Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025923Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025934Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026095Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026309Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110 (SPAdes)EnvironmentalOpen in IMG/M
3300026330Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133 (SPAdes)EnvironmentalOpen in IMG/M
3300026332Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138 (SPAdes)EnvironmentalOpen in IMG/M
3300026550Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)EnvironmentalOpen in IMG/M
3300026552Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)EnvironmentalOpen in IMG/M
3300026850Soil and rhizosphere microbial communities from Laval, Canada - mgHAC (SPAdes)EnvironmentalOpen in IMG/M
3300027379Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_10_20 (SPAdes)EnvironmentalOpen in IMG/M
3300027775Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control (SPAdes)EnvironmentalOpen in IMG/M
3300027882Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300028705Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_115EnvironmentalOpen in IMG/M
3300028707Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_148EnvironmentalOpen in IMG/M
3300028710Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_380EnvironmentalOpen in IMG/M
3300028715Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_203EnvironmentalOpen in IMG/M
3300028716Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_198EnvironmentalOpen in IMG/M
3300028718Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_194EnvironmentalOpen in IMG/M
3300028721Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_355EnvironmentalOpen in IMG/M
3300028744Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_367EnvironmentalOpen in IMG/M
3300028768Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_119EnvironmentalOpen in IMG/M
3300028782Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_193EnvironmentalOpen in IMG/M
3300028784Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121EnvironmentalOpen in IMG/M
3300028787Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_381EnvironmentalOpen in IMG/M
3300028793Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_159EnvironmentalOpen in IMG/M
3300028799Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_123EnvironmentalOpen in IMG/M
3300028803Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_120EnvironmentalOpen in IMG/M
3300028814Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183EnvironmentalOpen in IMG/M
3300028819Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153EnvironmentalOpen in IMG/M
3300028824Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197EnvironmentalOpen in IMG/M
3300028876Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_140EnvironmentalOpen in IMG/M
3300028884Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195EnvironmentalOpen in IMG/M
3300030510Bulk soil microbial communities from Mexico - Magueyal (Ma) metaG (v2)EnvironmentalOpen in IMG/M
3300031226Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_SEnvironmentalOpen in IMG/M
3300031799Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
ICChiseqgaiiFebDRAFT_1424951723300000363SoilPELLAAGGASDLQAAMIDQVQRAHELYSAGGKFRGAQLEVKLSAERATELMGMWLTEAREREDEDADKVVITMFAHPPAQQD*
JGI10216J12902_12098114623300000956SoilLQAAMIDQVQRAHELYSAEGRFRGAQLEVKLSAELATQLMGKWLEEAREREDERADKIVITMFAHPPAHRD*
F14TB_10149941813300001431SoilAMIDQVQRAHGLYAADGTFRGGQLEVKLSMERARELMSEILDQARNSEDDAADKIVLTIFAHPPADRT*
C688J18823_1070411723300001686SoilGGASDIQAAMIDQVQRAHGLYSADGTFRSAQLEVKLSIEAAVELMSKFLEAAREDEDDDADKIVLTVFAHPPANKD*
Ga0062593_10014325113300004114SoilMIDQVHRAHELYSAEGRFRGAQLEVKLSSEHATQLMGKWLEEAREREDETADKIVITMFAHSPAHQD*
Ga0062595_10025515623300004479SoilMIDQVQRAHELYSAKGKFRGAQLEVKLSAERATELMGMWLTEAREREDEDADKVVITMFAHPPAQQD*
Ga0062595_10248135913300004479SoilAAMIDQVQRAHTIYSAEGAFRSAQLEVKLTTEQARELMSQFLDAAREQEDESAEKMVLTTFAHPPAKPD*
Ga0062592_10210403523300004480SoilFRVSPELLAAGGASDLQAAMIDQVQRAHELYSAEGKFRGAQLEVKLSAERATELMGMWLTEAREREDEDADKVVITMFAHPPAQQD*
Ga0062594_10069632623300005093SoilAVAKIFRVAPELLAAGGARDIQAAMIDQVQRAHALYSADGTFRSAQAEIKLTIERALELMAAFLAAGRDLEDDDSDKIVLTMFAHPPAH*
Ga0066818_102719813300005104SoilLAAGGASDIQAAMIDQVQRAHGLYSGDGTFRSAQLEVKLSIEAAVTLMGNFLDSARSDEDDDADKIVLTVFAHPPANKD*
Ga0066690_1039543123300005177SoilKVFRVAPELLAAGGASDLQAAMLDQVQRAHVLYSAEGVFRSAQLEVKLTIERALELMAAFLSAARDLEDESADKIVLTMFAHPPAHQD*
Ga0066688_1020723013300005178SoilAAGGASDIQAAMLDQVQRAHALYSPGGTFRSAQVEVKLTVEHALDLMSEFLEKARTLEDQQADKLVLTMFAHPPAQRD*
Ga0066684_1066018213300005179SoilVQRAHALYSSQGTFRTAQLELRLSPDRALELMTEFLSHARKQEDPDAEMIVLTAFAHPPAAEDGSS*
Ga0066684_1072735613300005179SoilGGASDIQAAMLDQVQRAHALYSTGGAFRSAQVEVKLTVEKALDLMSEFLEKVRSLEDQEADKLVLTMFAHPPAQQD*
Ga0066676_1050383623300005186SoilQVQRAHAVYSADGTFRSAQLEVKLPIARALELMGTFLEAARDREDESADKIVLTMFAHPPAQQD*
Ga0066675_1082980423300005187SoilLLAAGGASDLQAAMLNQVQRAHALYSSGGTFRSAQLEVKLTVEQARDLMSEFLEKAHKLEDDRADKLVVTMFAHPPAQQD*
Ga0070690_10050395613300005330Switchgrass RhizosphereGASDIQAAMIDQVQRAHGLYSGDGTFRSAQLEVKLSIEAAVTLMGEFLDSAREGEDDDADKIVLTVFAHPPANKD*
Ga0070701_1021327613300005438Corn, Switchgrass And Miscanthus RhizosphereHGLYSGDGTFRSAQLEVKLSIEAAVTLMGEFLDSAREGEDDDADKIVLTVFAHPPANKD*
Ga0070708_10017127043300005445Corn, Switchgrass And Miscanthus RhizosphereAKIFRVAPELLAAGGARDLQAAMIDQVQRAHTLYSANGTFRGAQLELRLTLERALELTSEFLDKARALEDDDADKIVLTMFAHPPAT*
Ga0066689_1046354613300005447SoilGGASDIQAAMLDQVQRAHALYSAGGAFRGAQVEVKLTAENALELMSQFLENVRDREDDDADKLVLTMFAHPPAQQD*
Ga0070681_1081637113300005458Corn RhizospherePELLSAGGASDLQAAMIEQVQRAHGLYSERGTFRGAQLELRLGMDEALQLMTSFLDDAREREDESADKIVLTLFAHPPADQD*
Ga0070706_10146755013300005467Corn, Switchgrass And Miscanthus RhizosphereFRVAPELLAAGGARDLQAAMIDQVQRAHTLYSANGTFRGAQLELRLTLERALELTSEFLDKARALEDDDADKIVLTMFAHPPAT*
Ga0073909_1027294513300005526Surface SoilDIQAAMIDQVQRAHALYSVDGTFRSAQAEVKLTIERALELMAAFLAAGRDLEDDDADKIVLTMFAHPPAH*
Ga0066692_1043444923300005555SoilIQAAMIDQVQRAHAVYSGDGTFRSAQLEVKLTMERALELMGTFLEEARDLEDANADKIVMTMFAHPPAQRD*
Ga0066707_1067904013300005556SoilARDIQAAMIDQVQRAHGLYSGQGEFRGAQLELRLSLERALEMITAFLSAARDVEDEGAGKIVLTMFAHPPASQE*
Ga0066699_1073163413300005561SoilAAMIDQVQRAHMVYAPQGTFRSAQLELRLPMNRAVELITTFLTAARDVEDEQADKIVMTMFAHPPASQD*
Ga0066706_1073288123300005598SoilASDLQAAMIDQVQRAHALYSAAGVFRSAQLEVKLTIERALELMAAFLSAARDLEDESADKVVLTMFAHPPAQQD*
Ga0070702_10026995713300005615Corn, Switchgrass And Miscanthus RhizosphereAKVFRIAPELLAAGGASDIQAAMIDQVQRAHGLYSGDGTFRSAQLEVKLSIEAAVTLMGEFLDSAREGEDDDADKIVLTVFAHPPANKD*
Ga0066696_1082954513300006032SoilQDVQAAMIDQVQRAHTVYSPQGTFRSAQLELRLPMDRAVELMTTFLTAARDVEEEQADKIVLTMFAHPPASQD*
Ga0079222_1113862223300006755Agricultural SoilRVAPELLAAGGARDLQAAMIDQVQRAHSLYSGEGKFRSAQLELRLDLKRATEIMSAFMEAARHKEDETDDQIVLTMFAHPPAATD*
Ga0066659_1171449923300006797SoilGAQDVQAAMIDQVQRAHTVYSPQGTFRSAQLELRLPMDRAVELMTTFLTAARDVEEEQADKIVLTMFAHPPASQD*
Ga0066660_1154033513300006800SoilAAMIDQVQRAHAVYSGEGRFRGAQLELRLPLERALEIMSAFLQAARDVEDEGAEQIVLTMFAHPPAATD*
Ga0075425_10203835713300006854Populus RhizosphereAMIEQVQRAHALYAGAGEGEFRSAQLELRLPIDRALELMTAFLSAARDVAEPDADVIVLTMFAHPPASGTDDGPQP*
Ga0075424_10255214123300006904Populus RhizosphereASDLQAAMIDQVHRAHELYSAEGRFRGAQLEVKLSSEHATQLMGKWLEEAREREDETADKIVITMFAHSPAHQD*
Ga0099791_1047766923300007255Vadose Zone SoilYAADGTFRSAQLEVKLSMERVLKLMGTFLEETRDLEEPSADKIVLTMFAHPPAQRD*
Ga0099828_1184072023300009089Vadose Zone SoilVAPELLAAGGARDLQAAMIDQVQRAHTLYSPNGTFRGAQLELRLTLERALELMSEFLAKARALEDDDAEKIVLTMFAHPPATQERD*
Ga0099827_1035026733300009090Vadose Zone SoilVYSPDGTFRGAQVEVKLTIERALELMGTFLEEARDNEDESADKIVLTVFAHPPAQRD*
Ga0099827_1134509123300009090Vadose Zone SoilGRRVAPELLASGGAKDIQAAMIDQVQRAHAIYSSEGTFRSAQLELRLSHEQALDMMTAFLSDARDKEDPEAGKIVLTMFAHPPASQD*
Ga0099827_1173327813300009090Vadose Zone SoilLLAAGGARDIQAAMIDQVQRAHALYSDKGQFRSAQLELRLSIDRALEMMTAFLSAARDVEDEQADKIVLTMFAHPPASQD*
Ga0066709_10023736413300009137Grasslands SoilASGGARDIQAAMIDQVQRAHALYSDKGEFRGAQLELRLSLERALEMMTAFLSAARDVEDEGAGKIVLTMFAHTPASQD*
Ga0066709_10416038213300009137Grasslands SoilASDLQAAMIDQVQRAHALYSSAGVFRSAQLEVRLTIERARELMTRFLSEARELEDTSADKVVLTMFAHPPAQQD*
Ga0066709_10441904113300009137Grasslands SoilAGGAKDLQAAMIDQVERAHALYSADGVFRSAQLEVKLTLERALELMAAFLSAARDLEDEEADKIVLTMFAHPPAQQD*
Ga0075423_1204777823300009162Populus RhizosphereMIDQVQRAHARYSDGGTFRSAQLEVKLTIERALELMSTFLAAARDLEDPDADKVVLTMFAHPPATQD*
Ga0105072_102052813300009818Groundwater SandSDLQAAMIDQVQRAHSLYSADGNFRGAQLEVKLTLERALELMSTSLGAARDLEDRDADKIVLTMFAHPPAQQD*
Ga0126384_1246513323300010046Tropical Forest SoilMIDQVQRAHALYSSDGGFRGAQLEVKLSVDRATELMAAFMAAARDLEDDNVEKVVLTMFAHPPADQG*
Ga0134065_1013931413300010326Grasslands SoilAMLTQVHRAHALYSSGGTFRSAQIEVKLTVEQARDLMSEFLDKARKRENNKADKIVLTMFAHPPAQQD*
Ga0134080_1023686313300010333Grasslands SoilELLASGGASDLQAAMLTQVHRAHALYSSGGTFRSAQIEVKLTVEQARDLMSEFLDKARKRENNKADKIVLTMFAHPPAQQD*
Ga0134128_1087529013300010373Terrestrial SoilKVFRIAPELLAAGGASDIQAAMIDQVQRAHGLYSGDGTFRSAQLEVKLSIEAAVMLMGEFLDSAREGEDDDADKIVLTVFAHPPANKD*
Ga0134128_1184242023300010373Terrestrial SoilPELLAAGGASDIQAAMIDQVQRAHGHYSGDGTFRSAQLEVKLSVEAAVKLMGNFLQSARDDEDDDADKVVLTVFAHPPANKD*
Ga0134123_1341168813300010403Terrestrial SoilAAGGASDIQAAMIDQVQRAHGHYSGDGTFRSAQLEVKLSVEAAVKLMGNFLQSARDDEDDDADKVVLTVFAHPPANKD*
Ga0120175_103514013300011971PermafrostQVQRAHALYSADGTFRSAQLEVKLTIERALELMSTFLSAARDLEDDDADKIVLTMFAHPPAH*
Ga0120157_102260913300011994PermafrostVQRAHAVYSPDGTFRGAQVEVKLTIERALELMGTFLENVRDLEDENADKLVLTVFAHPPAQRD*
Ga0120156_100099713300011996PermafrostVQRAHALYSADGTFRSAQLEVKLTIERALELMSTFLSAARDLEDDDADKIVLTMFAHPPAH*
Ga0120134_104352223300012004PermafrostVAKVFLAAPELLAAGGASDIQAAMIDQVQRAHAVYSPDGTFRGAQVEVKLTMERALELMGTFLENVRDLEDENADKLVLTVFAHPPAQRD*
Ga0137379_1086620913300012209Vadose Zone SoilQAAMIDQVQRAHGSYSSQGEFRSAQLELRMSIERARELMTRFLAEARDLEDEQAEKIVLTVFAHPPAA*
Ga0137377_1137707923300012211Vadose Zone SoilSAGGASDIQAAMIDQVQRAHAVYSADGTFRSAQLEVKLPMARALELMGTFLEAARDREDESADKIVLTMFAHPPAQQD*
Ga0137367_1105847813300012353Vadose Zone SoilELLAAGGARDIQAAMIDQVQRAHALYSADGAFRSAQLEVKLTIERALELMTTFLSAARDLEDEDADKIVLTMFAHPPAH*
Ga0137371_1085261623300012356Vadose Zone SoilMIDQVQRAHALYSAGGVFRSAQLEVKLTLERALELMAAFLSAARDLEDEEADKIVLTMFAHPPAQQD*
Ga0137384_1136120523300012357Vadose Zone SoilAPELLAAGGASDIQAAMIDQVQRAHERYAADGTFRSAQLEVKLSMERALKLMGTFLEETRDLEEPSANKIVLTMFAHPPAQRD*
Ga0137360_1085525423300012361Vadose Zone SoilDIQAAMIDQVQRAHERYAADGTFRSAQLEVKLSMERALKLMGTFLEETRDLEEPSADKIVLTMFAHPPAQRD*
Ga0137373_1114385023300012532Vadose Zone SoilIDQVQRAHALYSDDGTFRSAQLEVKLTIPRALELMSTFLEAARDLEDENAGKVVLTMFAHPPAQQD*
Ga0157296_1027198323300012905SoilRAAMIDQVQRAHALYSADGTFRSAQAEIKLTIERALELMAAFLAAGRDLEDDDADKIVLTMFAHPPAH*
Ga0164298_1014132323300012955SoilVAKVFRIAPELLAAGGASDIQAAMIDQVQRAHGLYSGDGTFRSAQLEVKRSVEAAVKLMGNFLQSARDDEDDDADKVVLTVFAHPPANKD*
Ga0164302_1036023733300012961SoilQVQRAHGAYSADGTFRSAQLEVKLSIEAAVTLMGEFLDSARDGEDDDADKVVLTVFAHPPANKD*
Ga0134077_1030784213300012972Grasslands SoilMIDHVQRAHATYSPQGQFRSAQLEVRLPLERALEMMTAFLSAARDVEQDDTDKIVLTMFAHPPAAQE*
Ga0164308_1160551123300012985SoilAMIDQVQRAHSLYSTDGSFRSAQLEVKLTIEDALEVMSNFLERARDLEDDDADKIVLTMFAHPPAK*
Ga0164304_1061157523300012986SoilASDIQAAMIDQVQRAHGAYSADGTFRSAQLEVKLSIEAAVTLMGEFLDSARIQEDDDADKVVLTVFAHPPANKD*
Ga0164306_1028357013300012988SoilASDIQAAMIDQVQRAHGLYSGDGTFRSAQLEVKLSVEAAVKLMGNFLQSARDDEDDDADKVVLTVFAHPPANKD*
Ga0164306_1066921623300012988SoilAPELLAAGGARDIQAAMIDQVQRAHALYSADGTFRSAQLEVKLTIEEALEVMSNFLERARDLEDDDADKIVLTMFAHPPAK*
Ga0120154_100526013300013501PermafrostAMIDQVQRAHAVYSPDGTFRGAQVEVKLTMERALELMGTFLENVRDLEDESADKLVLTVFAHPPAQRD*
Ga0167629_101493553300015209Glacier Forefield SoilAGGASDIQAAMIDQVQRAHALYSADGTFRSAQLEVKLTIERALELMSTFLGAARDLEDEDADKIVLTMFAHPPAH*
Ga0137403_1116572013300015264Vadose Zone SoilAHAVYSPDGTFRSAQAEVKLTIERALELMGKFLKEARDRQDESADKIVLTMFAHPPAQRD
Ga0134074_141363723300017657Grasslands SoilFRVAPELLASGGARDIQAAMIDQVQRAHALYSEQGEFRGAQLELRLSLERALEMMTAFLSAARDVEDEAAGKIVLTMFAHPPASQD
Ga0184618_1003466643300018071Groundwater SedimentMIDQVQRAHEVYSSDGTFRSAQLEVKLTMARALELMGTFLEAARDLEDERADKIVLTMFAHPPAQRD
Ga0190268_1153573413300018466SoilAMIDQVQRAHALYSADGTFRGAQLDVKLSVERATELMASFLGAARDLEDEDADKVVITMFAHPPAQGDN
Ga0184643_129199113300019255Groundwater SedimentQAAMIDQVQRAYALYSGDGAFRSAQLEVKLTIERALELMTTFLAAARDLEDDDADKIVLTMFAHPPAH
Ga0184642_102524513300019279Groundwater SedimentELLAAGGASDIQAAMIDQVQRAHEVYSSDGTFRSAQLEVKLTMARALELMGTFLEAARDLEDERADKIVLTMFAHPPAQRD
Ga0173481_1084870813300019356SoilPELLAAGGASDLQAAMIEQVQRAHGLFSEEGAFRGAQLEVKLSMEQALRLMTDTLDRARDEEDESADKIVLTMFAHPPADQG
Ga0193704_100686313300019867SoilDLQAAMIDQVQRAHVLYSADGAFRSAQLEVKLTIERALELMSGFLEAARHLEDEQAGKVVLTMFAHPPAHQD
Ga0193700_102512513300019873SoilAHALYSADGTFRSAQAEVKLTIERALELMAAFLAAGRDLEDDDADKIVLTMFAHPPAH
Ga0193747_101111543300019885SoilDQVQRAHALYSTEGTFRSAQLELRLSPDRALEMMTEFLSRTREHEDPDAEMIVLTAFAHPPAAQDDESS
Ga0193732_106798613300020012SoilAKIFRVAPELLAAGGARDIQAAMIDQVQRAHALYSADGTFRSAQAEVKLTIERALELMAAFLAAGRDLEDDDADKIVLTMFAHPPAH
Ga0193745_109592613300020059SoilQVQRAHAVYSADGTFRSAQLELKLTMKRALELMGTFLETARAREDEGADKIVLTMFAHPPAQQD
Ga0210381_1023593723300021078Groundwater SedimentRAHALYSADGTFRSAQAEVKLTIERALELMAAFLAAGRDLEDDDADKIVLTMFAHPPAH
Ga0210382_1011915233300021080Groundwater SedimentAYALYSGDGAFRSAQLEVKLTIERALELMTTFLAAARDLEDEDADKIVLTMFAHPPAH
Ga0224452_104091733300022534Groundwater SedimentVAPELLAAGGARDLQAAMIDQVQRAHVLYSADGAFRSAQLEVKLTIERALELMSGFLEAARDLEDEQAGKVVLTMFAHPPAHQD
Ga0222622_1015289133300022756Groundwater SedimentLAAGGARDLQAAMIDQVQRAHVLYSADGAFRSAQLEVKLTIERALELMSGFLEAARDLEDEQAGKVVLTMFAHPPAHQD
Ga0207642_1063226713300025899Miscanthus RhizosphereRTAYSGDGTFRSAQLEVKLSIEAAVTLMGEFLDSAREGEDDDADKIVLTVFAHPPANKD
Ga0207646_1017698243300025922Corn, Switchgrass And Miscanthus RhizosphereDQVQRAHVLYSRAGAFHGAQLELKLTMERAVELMSSFLKAARDNEDESADKIVLTMFAHPPAEGDGP
Ga0207681_1050363223300025923Switchgrass RhizosphereRIAPELLAAGGASDIQAAMIDQVQRAHGLYSGDGTFRSAQLEVKLSIEAAVTLMGEFLDSAREGEDDDADKIVLTVFAHPPANKD
Ga0207686_1168782423300025934Miscanthus RhizosphereDIQAAMIDQVQRAHGLYSGDGTFRSAQLEVKLSVEAAVELMGNFLQSARDDEDDDADKVVLTVFAHPPANKD
Ga0207676_1193518713300026095Switchgrass RhizosphereASDIQAAMIDQVQRAHGLYSGDGTFRSAQLEVKLSIEAAVTLMGEFLDSAREGEDDDADKIVLTVFAHPPANKD
Ga0209055_112449633300026309SoilHALYSAGGAFRGAQVEVKLTAENALELMSQFLENVRDREDDDADKLVLTMFAHPPAQQD
Ga0209473_126774323300026330SoilIDQVQRAHALYSAAGVFRSAQLEVKLTIERALELMAAFLSAARDLEDESADKVVLTMFAHPPAQQD
Ga0209803_120051623300026332SoilGGASDIQAAMLDQVQRAHALYSAGGAFRGAQVEVKLTAENALELMSQFLENVRDREDDDADKLVLTMFAHPPAQQD
Ga0209474_1013702243300026550SoilRIAPELLAAGGASDIQAAMLDQVQRAHALYSTGGAFRSAQVEVKLTVEKALDLMSEFLEKVRSLEDQEADKLVLTMFAHPPAQQD
Ga0209474_1063552913300026550SoilVQRAHALYSSQGTFRTAQLELRLSPDRALELMTEFLSHARKQEDPDAEMIVLTAFAHPPAAEDGSS
Ga0209577_1038989513300026552SoilQVQRAHALYSGEGRFRGAQLELRLPLERALEIMSAFLQAARDVEDEGAEQIVLTMFAHPPAATD
Ga0208892_100459513300026850SoilLAAGGASDIQAAMIDQVQRAHGLYSGDGTFRSAQLEVKLSIEAAVTLMGNFLDSARSDEDDDADKIVLTVFAHPPANKD
Ga0209842_107265323300027379Groundwater SandAAGGASDLQAAMIDQVQRAHSLYSADGNFRGAQLEVKLTLERALELMSTSLGAARDLEDRDADKIVLTMFAHPPAQQD
Ga0209177_1017380423300027775Agricultural SoilMIDQVQRAHSLFSTDGTFRSAQLEVKLTIEQALELMSEFLAKARESEDESADKIVLTMFAHPPAHRD
Ga0209590_1053622323300027882Vadose Zone SoilVQRAHALYSSEGVFRGAQVEVKLSVERALELMAAFLTAARDLEDENADKVVLTMFAHPPANQD
Ga0307276_1006834923300028705SoilAAGGARDIQAAMIDQVQRAHALYSADGTFRSAQAEIKLTIERALELMAAFLAAGRDLEDDDADKIVLTMFAHPPAH
Ga0307276_1009905013300028705SoilGGARDIQAAMIDQVQRAYSLYSPDGTFRSAQAEVRLTMERALELMSKFLAEARDLEDEDADKIVLTMFAHPPAH
Ga0307291_116339713300028707SoilMIDQVQRAHVLYSADGAFRSAQLEVKLTIERALELMSGFLEAARDLEDEQAGKVVLTMFAHPPAHQD
Ga0307322_1009662313300028710SoilLAAGGASDIQAAMIDQVQRAHGLYSGDGTFRSAQLEVKLSIEAAVTLMGEFLDSARRGEDDDADKIVLTVFAHPPANKD
Ga0307313_1022053613300028715SoilFRVAPELLAAGGARDIQAAMIDQVQRAYALYSGDGAFRSAQLEVKLTIERALELMTTFLAAARDLEDDDADKIVLTMFAHPPAH
Ga0307311_1009641813300028716SoilELLAAGGARDLQAAMIDQVQRAHVLYSADGAFRSAQLEVKLTIERALELMSGFLEAARDLEDEQAGKVVLTMFAHPPAHQD
Ga0307307_1001346313300028718SoilIDQVQRAHVLYSADGAFRSAQLEVKLTIERALELMSGFLEAARDLEDEQAGKVVLTMFAHPPAHQD
Ga0307307_1002923233300028718SoilKVFRVAPELLAAGGARDIQAAMIDQVQRAHALYSADGTFRSAQLEVKLTIERALELMSTFLSAARDLEDENADKIVLTMFAHPPAH
Ga0307307_1030590213300028718SoilDIQAAMIDQVQRAHALYSADGTFRSAQLEVKLTIERALELMSTFLGAARDLEDENADKIVLTMFAHPPAN
Ga0307315_1016873023300028721SoilFRVAPELLAAGGARDIQAAMIDQVQRAHALYSADGTFRSAQAEVKLTIERALELMAAFLAAGRDLEDDDADKIVLTMFAHPPAH
Ga0307318_1011823813300028744SoilASDIQAAMIDQVQRAHALYSADGGFRSAQLEVKLTIERVLELMSTFLTAARDLEDEDADKIVLTMFAHPPAN
Ga0307280_1037410123300028768SoilQRAHGLYSGDGTFRSAQLEVKLSIEAAVTLMGEFLDSARRGEDDDADKIVLTVFAHPPANKD
Ga0307306_1020999213300028782SoilAHGLYSGDGTFRSAQLEVKLSIEAAVTLMGEFLDSARRGEDDDADKIVLTVFAHPPANKD
Ga0307282_1036918423300028784SoilELLAAGGASDLQAAMIDQVQRAHALYSADGTFRGAQLEVKLTLDRALELMSAFLEAARDLEDENADKIVLTMFAHPPAP
Ga0307323_1000086213300028787SoilPELLAAGGASDIQAAMIDQVQRAHGVYSADGTFRSAQVEVKLSIEAAVKLISAFLESAREGEDDDADKLVLTVFAHPPANKD
Ga0307323_1004471213300028787SoilVAKIFRVAPELLAAGGARDIQAAMIDQVQRAHALYSADGTFRSAQAEIKLTIERALELMAAFLAAGRDLEDDDADKIVLTMFAHPPAH
Ga0307323_1017497513300028787SoilAAMIDQVQRAHGLYSGDGTFRSAQLEVKLSIEAAVTLMGEFLDSARRGEDDDADKIVLTVFAHPPANKD
Ga0307299_1019973813300028793SoilAAGGARDIQAAMIDQVQRAHALYSADGTFRSAQAEVKLTIERALELMAAFLAAGRDLEDDDADKIVLTMFAHPPAH
Ga0307299_1025097113300028793SoilIQAAMIDQVQRAYALYSGDGAFRSAQLEVKLTIERVLELMSTFLTAARDLEDEDADKIVLTMFAHPPAN
Ga0307284_1018753313300028799SoilLQAAMIDEVQRAHALYSADGTFRGAQLEVKLTLDRALELMSAFLEAARDLEDENADKIVLTMFAHPPAP
Ga0307284_1046793913300028799SoilAPELLAAGGASDIQAAMIDQVQRAHGVYSADGTFRSAQVEVKLSIEAAVKLISAFLESAREGEDDDADKLVLTVFAHPPANKD
Ga0307281_1009545713300028803SoilAHTIYSTDGSFRSAQLEVKLTIERALELMSTFLGAARDLEDDDADKIVLTMFAHPPAN
Ga0307302_1051362013300028814SoilQRAHASYSTEGVFRGAQLEVKLTMERATELMAAFLSAARDLEDENADKVVLTMFAHPPAQQD
Ga0307296_1057522123300028819SoilQAAMIDQVQRAHALYSADGTFRSAQLEVKLTIERALELMSTFLGAARDLEDENADKIVLTMFAHPPAN
Ga0307310_1050350613300028824SoilGASDIQAAMIDQVQRAHGLYSADGTFRSAQLEVKLTIEDALELMSKFLESAREREDDSAEKIVLTVFAHPPANKD
Ga0307286_1039328313300028876SoilMIDQVQRAHGLYSGDGTFRSAQLEVKLSIEAAVTLMGEFLDSARRGEDDDADKIVLTVFAHPPANKD
Ga0307308_10000221203300028884SoilAAGGASDIQAAMIDQVQRAHGVYSADGTFRSAQVEVKLSIEAAVKLISAFLESAREGEDDDADKLVLTVFAHPPANKD
Ga0307308_1043078513300028884SoilIFRVAPELLAAGGASDIQAAMIDQVQRAHALYSADGGFRSAQLEVKLTIERVLELMSTFLTAARDLEDEDADKIVLTMFAHPPAN
Ga0307308_1053366713300028884SoilVAPELLAAGGARDLQAAMIDQVQRAHAIYSGEGRFRGAQLELKLPLERALEVMSAFMGAARDMEDEGAEQIVLTMFAHPPAATD
Ga0268243_114736213300030510SoilSDLQAAMIDQVQRAHALYSDGGSFRSAQLEVKLTIERALELMAAFLSAARDLEDENADKVVLTMFAHPPAS
Ga0307497_1001040623300031226SoilMIGQVQRAHSLYSGDGTFRSAQLEVKLSIEAAVTLMGEFLDSARSEEDEGADKVVLTVFAHPPAKQGLEA
Ga0318565_1053769423300031799SoilPLHLLDHRRLEIAGAAGGASDLQAAMIEQVQRAHRLYAEAGAFRGAQLELKLTMEKALEMMAGFLENARAVEDESADKIVLTLFAHPPAEED

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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