Metagenome / Metatranscriptome Family F059416

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F059416
Family Type	Metagenome / Metatranscriptome
Number of Sequences	134
Average Sequence Length	53 residues
Representative Sequence	MTHTESAANQNQIQQSLVPMLRTWTHSIGWTVLLSAALAVLFAMLCDGCSGIH
Number of Associated Samples	90
Number of Associated Scaffolds	134

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	88.64 %
% of genes near scaffold ends (potentially truncated)	20.90 %
% of genes from short scaffolds (< 2000 bps)	75.37 %
Associated GOLD sequencing projects	73
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.41

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (70.896 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere (22.388 % of family members)
Environment Ontology (ENVO)	Unclassified (35.075 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (58.955 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 59.26% β-sheet: 0.00% Coil/Unstructured: 40.74%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.41
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.41
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 134 Family Scaffolds
PF12704	MacB_PCD	11.94
PF03551	PadR	8.21
PF04226	Transgly_assoc	8.21
PF00106	adh_short	6.72
PF00194	Carb_anhydrase	3.73
PF07617	DUF1579	1.49
PF12146	Hydrolase_4	1.49
PF12697	Abhydrolase_6	1.49
PF04185	Phosphoesterase	1.49
PF04255	DUF433	0.75
PF01882	DUF58	0.75
PF13376	OmdA	0.75
PF13485	Peptidase_MA_2	0.75
PF15887	Peptidase_Mx	0.75
PF13460	NAD_binding_10	0.75
PF00753	Lactamase_B	0.75
PF13366	PDDEXK_3	0.75
PF10592	AIPR	0.75
PF13193	AMP-binding_C	0.75

COG ID	Name	Functional Category	% Frequency in 134 Family Scaffolds
COG1695	DNA-binding transcriptional regulator, PadR family	Transcription [K]	8.21
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	8.21
COG1846	DNA-binding transcriptional regulator, MarR family	Transcription [K]	8.21
COG2261	Uncharacterized membrane protein YeaQ/YmgE, transglycosylase-associated protein family	General function prediction only [R]	8.21
COG3338	Carbonic anhydrase	Inorganic ion transport and metabolism [P]	3.73
COG3511	Phospholipase C	Cell wall/membrane/envelope biogenesis [M]	1.49
COG1721	Uncharacterized conserved protein, DUF58 family, contains vWF domain	Function unknown [S]	0.75
COG2442	Predicted antitoxin component of a toxin-antitoxin system, DUF433 family	Defense mechanisms [V]	0.75

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	70.90 %
Unclassified	root	N/A	29.10 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	70.90 %
Unclassified	root	N/A	29.10 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	70.90 %
Unclassified	root	N/A	29.10 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	39.55 %
Unclassified	root	N/A	29.10 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.49 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	29.10 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	26.12 %
Blastocatellia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	2.99 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.75 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.75 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	29.10 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	23.13 %
Blastocatellales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales	2.99 %
Candidatus Angelobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter	1.49 %
Moraxellales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales	0.75 %
unclassified Terriglobia	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia	0.75 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.75 %
Ktedonobacteria	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	29.10 %
unclassified Terriglobales	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales	14.93 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5.97 %
Pyrinomonadaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae	2.99 %
unclassified Candidatus Angelobacter	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter	1.49 %
Moraxellaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae	0.75 %
Acidobacteriia bacterium SbA2	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium SbA2	0.75 %
Ktedonobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales	0.75 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	29.10 %
Terriglobales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	14.93 %
Acidicapsa	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa	3.73 %
unclassified Pyrinomonadaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae	2.99 %
Candidatus Angelobacter sp. Gp1-AA117	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	1.49 %
Ktedonobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae	0.75 %
Edaphobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter	0.75 %
Moraxellaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae	0.75 %
Acidobacteriia bacterium SbA2	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium SbA2	0.75 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	29.10 %
Terriglobales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	14.93 %
Acidicapsa acidisoli	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa acidisoli	3.73 %
Pyrinomonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	2.99 %
Candidatus Angelobacter sp. Gp1-AA117	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	1.49 %
Edaphobacter aggregans	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter aggregans	0.75 %
Ktedonobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → Ktedonobacter	0.75 %
Moraxellaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae	0.75 %
Acidobacteriia bacterium SbA2	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium SbA2	0.75 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	29.10 %
Terriglobales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	14.93 %
Acidicapsa acidisoli	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa acidisoli	3.73 %
Pyrinomonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	2.99 %
Candidatus Angelobacter sp. Gp1-AA117	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	1.49 %
Ktedonobacter racemifer	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → Ktedonobacter → Ktedonobacter racemifer	0.75 %
Edaphobacter aggregans	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter aggregans	0.75 %
Moraxellaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae	0.75 %
Acidobacteriia bacterium SbA2	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium SbA2	0.75 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.75 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002906\|JGI25614J43888_10215881	Not Available	519	Open in IMG/M
3300003321\|soilH1_10126707	All Organisms → cellular organisms → Bacteria	1508	Open in IMG/M
3300004153\|Ga0063455_100000523	All Organisms → cellular organisms → Bacteria	4961	Open in IMG/M
3300004153\|Ga0063455_100351654	All Organisms → cellular organisms → Bacteria	840	Open in IMG/M
3300004479\|Ga0062595_100039224	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	2050	Open in IMG/M
3300004479\|Ga0062595_100088499	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	1597	Open in IMG/M
3300005177\|Ga0066690_10252822	All Organisms → cellular organisms → Bacteria	1183	Open in IMG/M
3300005187\|Ga0066675_10517989	All Organisms → cellular organisms → Bacteria	893	Open in IMG/M
3300005329\|Ga0070683_100134992	All Organisms → cellular organisms → Bacteria	2336	Open in IMG/M
3300005329\|Ga0070683_100617801	All Organisms → cellular organisms → Bacteria	1037	Open in IMG/M
3300005329\|Ga0070683_102199463	All Organisms → cellular organisms → Bacteria	529	Open in IMG/M
3300005338\|Ga0068868_101070854	All Organisms → cellular organisms → Bacteria	740	Open in IMG/M
3300005345\|Ga0070692_10223480	All Organisms → cellular organisms → Bacteria	1114	Open in IMG/M
3300005345\|Ga0070692_10378110	Not Available	888	Open in IMG/M
3300005434\|Ga0070709_10723917	All Organisms → cellular organisms → Bacteria → Acidobacteria	776	Open in IMG/M
3300005434\|Ga0070709_10836122	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	724	Open in IMG/M
3300005434\|Ga0070709_11436584	Not Available	559	Open in IMG/M
3300005436\|Ga0070713_100177628	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter aggregans	1911	Open in IMG/M
3300005436\|Ga0070713_100211145	All Organisms → cellular organisms → Bacteria → Acidobacteria	1757	Open in IMG/M
3300005436\|Ga0070713_100220673	All Organisms → cellular organisms → Bacteria	1720	Open in IMG/M
3300005436\|Ga0070713_100703497	Not Available	965	Open in IMG/M
3300005436\|Ga0070713_101658517	Not Available	621	Open in IMG/M
3300005437\|Ga0070710_10156999	All Organisms → cellular organisms → Bacteria	1408	Open in IMG/M
3300005437\|Ga0070710_10415693	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa acidisoli	905	Open in IMG/M
3300005439\|Ga0070711_100009566	All Organisms → cellular organisms → Bacteria	5976	Open in IMG/M
3300005439\|Ga0070711_101113512	Not Available	681	Open in IMG/M
3300005458\|Ga0070681_10458756	All Organisms → cellular organisms → Bacteria	1186	Open in IMG/M
3300005458\|Ga0070681_11500336	Not Available	599	Open in IMG/M
3300005526\|Ga0073909_10406488	Not Available	642	Open in IMG/M
3300005530\|Ga0070679_101296592	Not Available	674	Open in IMG/M
3300005533\|Ga0070734_10001072	All Organisms → cellular organisms → Bacteria	43825	Open in IMG/M
3300005537\|Ga0070730_10046961	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	3142	Open in IMG/M
3300005542\|Ga0070732_10013543	All Organisms → cellular organisms → Bacteria	4518	Open in IMG/M
3300005542\|Ga0070732_10033125	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	2946	Open in IMG/M
3300005542\|Ga0070732_10212639	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae	1156	Open in IMG/M
3300005547\|Ga0070693_100109320	All Organisms → cellular organisms → Bacteria → Acidobacteria	1698	Open in IMG/M
3300005547\|Ga0070693_100329936	Not Available	1038	Open in IMG/M
3300005568\|Ga0066703_10797998	Not Available	540	Open in IMG/M
3300005575\|Ga0066702_10158042	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	1347	Open in IMG/M
3300005578\|Ga0068854_100733442	All Organisms → cellular organisms → Bacteria	856	Open in IMG/M
3300005578\|Ga0068854_102205240	Not Available	510	Open in IMG/M
3300005614\|Ga0068856_100285812	All Organisms → cellular organisms → Bacteria → Acidobacteria	1666	Open in IMG/M
3300005616\|Ga0068852_100438928	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	1290	Open in IMG/M
3300006028\|Ga0070717_10049267	All Organisms → cellular organisms → Bacteria	3457	Open in IMG/M
3300006028\|Ga0070717_10180240	All Organisms → cellular organisms → Bacteria	1841	Open in IMG/M
3300006028\|Ga0070717_11308830	Not Available	659	Open in IMG/M
3300006163\|Ga0070715_10032751	All Organisms → cellular organisms → Bacteria	2120	Open in IMG/M
3300006163\|Ga0070715_10554135	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	667	Open in IMG/M
3300006173\|Ga0070716_100212969	All Organisms → cellular organisms → Bacteria	1292	Open in IMG/M
3300006173\|Ga0070716_101693507	Not Available	521	Open in IMG/M
3300006175\|Ga0070712_100507158	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → Ktedonobacter → Ktedonobacter racemifer	1012	Open in IMG/M
3300006175\|Ga0070712_101200734	Not Available	660	Open in IMG/M
3300006358\|Ga0068871_100569093	All Organisms → cellular organisms → Bacteria	1028	Open in IMG/M
3300006797\|Ga0066659_10825569	All Organisms → cellular organisms → Bacteria	769	Open in IMG/M
3300006903\|Ga0075426_10142415	All Organisms → cellular organisms → Bacteria → Acidobacteria	1728	Open in IMG/M
3300006903\|Ga0075426_10877572	Not Available	676	Open in IMG/M
3300006954\|Ga0079219_10555644	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa acidisoli	824	Open in IMG/M
3300009088\|Ga0099830_10165818	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	1709	Open in IMG/M
3300009093\|Ga0105240_10268751	Not Available	1964	Open in IMG/M
3300009098\|Ga0105245_10002209	All Organisms → cellular organisms → Bacteria	17634	Open in IMG/M
3300009098\|Ga0105245_10071951	All Organisms → cellular organisms → Bacteria	3141	Open in IMG/M
3300009174\|Ga0105241_11076565	All Organisms → cellular organisms → Bacteria → Acidobacteria	756	Open in IMG/M
3300009545\|Ga0105237_11280101	Not Available	740	Open in IMG/M
3300009551\|Ga0105238_10009263	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	9853	Open in IMG/M
3300009551\|Ga0105238_10049579	All Organisms → cellular organisms → Bacteria	4227	Open in IMG/M
3300010371\|Ga0134125_10541495	Not Available	1288	Open in IMG/M
3300010371\|Ga0134125_12170011	All Organisms → cellular organisms → Bacteria	604	Open in IMG/M
3300010373\|Ga0134128_10476827	All Organisms → cellular organisms → Bacteria	1391	Open in IMG/M
3300010373\|Ga0134128_12762749	Not Available	541	Open in IMG/M
3300010398\|Ga0126383_10005912	All Organisms → cellular organisms → Bacteria	8470	Open in IMG/M
3300011269\|Ga0137392_10239215	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium SbA2	1492	Open in IMG/M
3300011271\|Ga0137393_10020188	All Organisms → cellular organisms → Bacteria → Acidobacteria	4851	Open in IMG/M
3300011332\|Ga0126317_10218059	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	1144	Open in IMG/M
3300012206\|Ga0137380_10114547	All Organisms → cellular organisms → Bacteria	2463	Open in IMG/M
3300012683\|Ga0137398_10054762	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	2377	Open in IMG/M
3300012683\|Ga0137398_11181030	Not Available	523	Open in IMG/M
3300012917\|Ga0137395_10011346	All Organisms → cellular organisms → Bacteria	4881	Open in IMG/M
3300012929\|Ga0137404_10464460	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1125	Open in IMG/M
3300012951\|Ga0164300_10418384	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa acidisoli	742	Open in IMG/M
3300012955\|Ga0164298_10176254	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	1227	Open in IMG/M
3300012957\|Ga0164303_10187050	Not Available	1134	Open in IMG/M
3300012957\|Ga0164303_10203148	Not Available	1099	Open in IMG/M
3300012960\|Ga0164301_10012814	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	3470	Open in IMG/M
3300012960\|Ga0164301_10020227	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	2963	Open in IMG/M
3300012960\|Ga0164301_10076081	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	1839	Open in IMG/M
3300012960\|Ga0164301_10310050	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	1067	Open in IMG/M
3300012961\|Ga0164302_10073607	Not Available	1793	Open in IMG/M
3300012961\|Ga0164302_11336164	Not Available	581	Open in IMG/M
3300012984\|Ga0164309_11227675	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	630	Open in IMG/M
3300012985\|Ga0164308_10224455	Not Available	1448	Open in IMG/M
3300012987\|Ga0164307_11016117	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	676	Open in IMG/M
3300015264\|Ga0137403_10252561	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	1673	Open in IMG/M
3300019789\|Ga0137408_1235336	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	656	Open in IMG/M
3300021170\|Ga0210400_10001433	All Organisms → cellular organisms → Bacteria	23753	Open in IMG/M
3300021560\|Ga0126371_11497053	Not Available	803	Open in IMG/M
3300021560\|Ga0126371_12610251	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	612	Open in IMG/M
3300021560\|Ga0126371_13636723	Not Available	520	Open in IMG/M
3300024288\|Ga0179589_10071436	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	1361	Open in IMG/M
3300024330\|Ga0137417_1280374	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	514	Open in IMG/M
3300025321\|Ga0207656_10217491	All Organisms → cellular organisms → Bacteria → Acidobacteria	928	Open in IMG/M
3300025544\|Ga0208078_1006604	Not Available	2858	Open in IMG/M
3300025898\|Ga0207692_10656305	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa acidisoli	678	Open in IMG/M
3300025906\|Ga0207699_10529680	All Organisms → cellular organisms → Bacteria	853	Open in IMG/M
3300025912\|Ga0207707_10111638	All Organisms → cellular organisms → Bacteria	2390	Open in IMG/M
3300025912\|Ga0207707_11456262	Not Available	544	Open in IMG/M
3300025913\|Ga0207695_10079176	All Organisms → cellular organisms → Bacteria	3332	Open in IMG/M
3300025914\|Ga0207671_10358855	All Organisms → cellular organisms → Bacteria → Acidobacteria	1156	Open in IMG/M
3300025914\|Ga0207671_10456516	All Organisms → cellular organisms → Bacteria → Acidobacteria	1018	Open in IMG/M
3300025917\|Ga0207660_10286613	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	1308	Open in IMG/M
3300025917\|Ga0207660_10330089	All Organisms → cellular organisms → Bacteria → Acidobacteria	1219	Open in IMG/M
3300025921\|Ga0207652_10234281	All Organisms → cellular organisms → Bacteria → Proteobacteria	1655	Open in IMG/M
3300025924\|Ga0207694_10181010	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	1709	Open in IMG/M
3300025924\|Ga0207694_10316251	All Organisms → cellular organisms → Bacteria → Acidobacteria	1288	Open in IMG/M
3300025927\|Ga0207687_10026877	Not Available	3856	Open in IMG/M
3300025928\|Ga0207700_10395234	All Organisms → cellular organisms → Bacteria	1211	Open in IMG/M
3300025928\|Ga0207700_11403601	Not Available	621	Open in IMG/M
3300025929\|Ga0207664_10152968	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	1961	Open in IMG/M
3300025929\|Ga0207664_11204648	All Organisms → cellular organisms → Bacteria	675	Open in IMG/M
3300025939\|Ga0207665_11368365	Not Available	564	Open in IMG/M
3300026304\|Ga0209240_1141276	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	774	Open in IMG/M
3300026319\|Ga0209647_1006279	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	8558	Open in IMG/M
3300027376\|Ga0209004_1007091	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa acidisoli	1583	Open in IMG/M
3300027826\|Ga0209060_10001245	All Organisms → cellular organisms → Bacteria	29568	Open in IMG/M
3300027842\|Ga0209580_10021041	All Organisms → cellular organisms → Bacteria → Acidobacteria	2903	Open in IMG/M
3300027842\|Ga0209580_10284481	Not Available	823	Open in IMG/M
3300027857\|Ga0209166_10026000	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	3591	Open in IMG/M
3300031057\|Ga0170834_101041628	Not Available	715	Open in IMG/M
3300031446\|Ga0170820_16313599	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	1326	Open in IMG/M
3300031474\|Ga0170818_114931381	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	814	Open in IMG/M
3300031938\|Ga0308175_100551941	All Organisms → cellular organisms → Bacteria	1233	Open in IMG/M
3300032174\|Ga0307470_11097857	Not Available	640	Open in IMG/M
3300033486\|Ga0316624_10084968	Not Available	2176	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	82.84%
Host-Associated	Host-Associated	17.16%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	82.09%
Plants	Host-Associated → Plants	17.16%
Aquatic	Environmental → Aquatic	0.75%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	82.09%
Rhizosphere	Host-Associated → Plants → Rhizosphere	11.19%
Rhizoplane	Host-Associated → Plants → Rhizoplane	5.22%
Freshwater	Environmental → Aquatic → Freshwater	0.75%
Roots	Host-Associated → Plants → Roots	0.75%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	46.27%
Loam	Environmental → Terrestrial → Soil → Loam	35.07%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	11.19%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	5.22%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.75%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.75%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.75%

Habitat	Taxonomy	Distribution
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	32.84%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	32.09%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	11.19%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	5.97%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	5.22%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	3.73%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.99%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.49%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.75%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.75%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.75%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.75%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.75%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.75%

Habitat	Taxonomy	Distribution
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	22.39%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	9.70%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	8.96%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	8.96%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	7.46%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	7.46%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	4.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.73%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.99%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.99%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.24%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.24%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.24%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.49%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.49%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.49%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.49%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.75%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.75%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	0.75%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.75%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.75%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.75%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.75%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.75%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.75%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002906	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm	Environmental	Open in IMG/M
3300003321	Sugarcane bulk soil Sample H1	Environmental	Open in IMG/M
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005533	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005834	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2	Host-Associated	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300011332	Soil microbial communities from California, USA to study soil gas exchange rates - SR-CA-SC2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300019789	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300024288	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal	Environmental	Open in IMG/M
3300024330	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300025321	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025544	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-2 deep-072012 (SPAdes)	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025913	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025924	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm (SPAdes)	Environmental	Open in IMG/M
3300026319	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm (SPAdes)	Environmental	Open in IMG/M
3300027376	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_RefH0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027826	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027857	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300033486	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_N3_C1_D5_A	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25614J43888_102158811	3300002906	Grasslands Soil	MIKAESAHPNQIQQSLVPMLRTWTHSIGWTIILATVLAVLFALICDGCFGIH*
soilH1_101267072	3300003321	Sugarcane Root And Bulk Soil	MAHIHSAANPNQIQKSLVPMLRTWAHSIGWTVLLSAILAVLFALAVDGCAGIH*
Ga0063455_1000005236	3300004153	Soil	MTHSDSAVNQNQIQKSLVPMLRTWMHSIGWTVLLSAALAVLFALAVDGCANIH*
Ga0063455_1003516542	3300004153	Soil	LPAFTHSAATAAEAQNAMTHTGSGINQNQIQKSLVPMLRTWAHSIGWTVLLSAALAILFSMVCDGCAGIH*
Ga0062595_1000392242	3300004479	Soil	MNSTSQADHNQIQKSLVPMLRTWAHSIGWTVLLSAILAVLFALAVDGCAGIR*
Ga0062595_1000884994	3300004479	Soil	MTHTDSGINQNQIQKSLVPMLRTWTHSIGWTVLLSAALAILFALVVDGCANIR*
Ga0066690_102528222	3300005177	Soil	MTHTESAANQNQIQQSLVPMLRTWTHSIGWTILLSAALAILFAMLCDGCSGMH*
Ga0066675_105179891	3300005187	Soil	MTHTESAANQNQIQQSLVPMLRTWTHSIGWTILLSAALAILFAMLCDGCSGIH*
Ga0070683_1001349922	3300005329	Corn Rhizosphere	MTTIDSGINQNQIQRSLVPMLRTWTHSIGWTVLLSTLLAVLFALAVDGCANIH*
Ga0070683_1006178013	3300005329	Corn Rhizosphere	AAEAQNAMTHTGSGINQNQIQKSLVPMLRTWAHSIGWTVLLSAALAILFSMVCDGCAGIH
Ga0070683_1021994632	3300005329	Corn Rhizosphere	EAQNAMTHTGSGINQNQIQKSLVPMLRTWAHSIGWTVLLSAALAILFSMVCDGCAGIH*
Ga0068868_1010708541	3300005338	Miscanthus Rhizosphere	MTHTGSGINQNQIQKSLVPMLRTWAHSIGWTVLLSAALAILFSMVCDGCAGIN*
Ga0070692_102234802	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	MTHTESAHQNQVQRSLVPMLRTWTRCISCTVLLSAALAILFALLLDGCSGVH*
Ga0070692_103781101	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	MTHTDSGTNQSQIQKSLVPMLRTWTHGIGWTVLLSAALAILFALAVDGCSSIH*
Ga0070709_107239172	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MAHTYSAANPNQIQKSLVPMLRTWAQSIGWTVLLSAALAILFSMVCDGCA
Ga0070709_108361222	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MTNIESAAGQNQIQRSLVPMLRTWTHSIGWTVLLSAALAVLFAMLCDGCSGMR*
Ga0070709_114365841	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MPHTESPEQNQIHQSLIPMLRVWTRSIGWTIVLSAGLAVLFALICDGCSGVR*
Ga0070713_1001776283	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MTHTDSATHPNQIQRSLVPMLRTWTHSIGWTVLLSAALAVLFALAVDGCSGVH*
Ga0070713_1002111453	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MTHTDPAVNQNQIHQSLVPMLRTWTRSIGWTVLLSAGLAVLFAMLCDGCAGIH*
Ga0070713_1002206731	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MTDTHPAADQNQIQRSLVPMLRTWTHSIGWTVLLSAALAVLFAMLCDGCSGMR*
Ga0070713_1007034972	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MTHTDSAADQNQIQKSLVPMLRTWTHSIGWTVLLSAALAVLFAMLCDGCSGIH*
Ga0070713_1016585171	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MTTIDSGMNQNQIQRSLVPMLRTWTRSIGWTVLLSAALAVLFAMVCDGCS
Ga0070710_101569991	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MTNIESAAGQNQIQRSLVPMLRTWTHSIGWTILLSAALAVLFAMLCDGCSGMR*
Ga0070710_104156931	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MTNIESAAGQNQIQRSLVPMLRTWTHSIGWTVLLSAVLAVLFAMLCDGCSGMR*
Ga0070711_1000095662	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MTNIESAASQNQIQRSLVPMLRTWTQSIGWTVLLSAALAVLFAMLCDGCSGMR*
Ga0070711_1011135121	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MTNIESAASQNQIQRSLVPMLRTWTHSIGWTVLLSAALAVLFAMLCDGCSGMR*
Ga0070681_104587561	3300005458	Corn Rhizosphere	MTTIDPGINQNQIQRSLVPMLRTWTQSIGWTVLLSTLLAVLFALAVDGCANIH*
Ga0070681_115003362	3300005458	Corn Rhizosphere	MTAIDSGMDQNQIQKSLAPMLRTWTRSIGWTVLLSTLLAVLFALAVDGCANIH*
Ga0073909_104064881	3300005526	Surface Soil	MTHTESAITQNQIQKSLLPMLRTWTHSIGWTVLLSAALAVLFAMLCDGCSGTR*
Ga0070679_1012736742	3300005530	Corn Rhizosphere	MTHTESAHQNQVQRSLVPMLRTWTRCISWTVLLSAALAILFALLLDGCSGVH*
Ga0070679_1012965922	3300005530	Corn Rhizosphere	MTHTDSGTNQSQIQKSLVPMLRTWTHSIGWTVLLSAALAILFALAVDGCSSIH*
Ga0070734_100010724	3300005533	Surface Soil	MTTIDSGMNQNQIQRSLVPMLRTWTRSIGWTVLLSAALAILFALLCDGCSNIH*
Ga0070730_100469614	3300005537	Surface Soil	MTHIHSAAGQNQIQKSLVPMLRTWTHSIGWTVLLSAALAVLFAMLCDGCAGLH*
Ga0070732_100135436	3300005542	Surface Soil	MTHTHPAADQNQIQRSLVPMLRTWTHSIGWTVLLSAGLAVLFAMLCDGCSGIH*
Ga0070732_100331252	3300005542	Surface Soil	MTPIESGMNQNQIQKSLVPMLRTWAHSIGWTVLLSAALAILFALLCDGCSNIH*
Ga0070732_102126392	3300005542	Surface Soil	MTHTDSATHPNQIQRSLVPMLRTWTHSIGWTVLLSTLLAVLFALLCDGCSGVH*
Ga0070693_1001093202	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	MTHTGSGINQNQIQKSLVPMLRTWAHSIGWTVLLSAALAILFSMVCDGCAGIH*
Ga0070693_1003299361	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	MTHTETAHQNQVQRSLVPMLRTWTRSIGWTVLLSALLAVLFALLLDGCSGAH*
Ga0066703_107979982	3300005568	Soil	MTHIDSAINQNQVKKSLVPMLRVWTRSIGWTVILSTLLAVLFALALDGCSGLR*
Ga0066702_101580423	3300005575	Soil	MTHTDSAINQNQVQKSLAPMLRVWTRGIGWTVILSTLLAVLFALALDGCSGLR*
Ga0068854_1007334422	3300005578	Corn Rhizosphere	MTHTGSEINQNQIQKSLVPMLRTWAQSIGWTVLLSAALAILFSMVCDGCANIH*
Ga0068854_1022052401	3300005578	Corn Rhizosphere	LPAFTHSAATAAEAQNAMTHTGSGINQNQIQKSLVPMLRTWAHSIGWTVLLSAALAILFSMVCDGCA
Ga0068856_1002858121	3300005614	Corn Rhizosphere	MTHTGSEINQNQIQKSLVPMLRTWAQTIGWTVLLSATLAILFSMVCDGCAGIN*
Ga0068852_1004389281	3300005616	Corn Rhizosphere	HSAATAAEAQNAMTHTGSGINQNQIQKSLVPMLRTWAHSIGWTVLLSAALAILFSMVCDGCAGIH*
Ga0068851_106950841	3300005834	Corn Rhizosphere	MTHTGSGINQNQIQKSLVPMLRTWAHSIGWTVLLSAA
Ga0070717_100492673	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MTHAQPGANQNQIQRSLVPMLRTWTHSIGWTILLSAALAVLFAMLCDGCSGMH*
Ga0070717_101802403	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MTHPESATQNQIQSSLAPMLRMWTRSIGWTIVISTVMTVLFALLCDGCSGIH*
Ga0070717_113088301	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MTHTDPAVNQNQIHQSLVPMLRTWIRSIGWTVLLSAGLAVLFAMLCDGCAGIH*
Ga0070715_100327512	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MTHSDSGMNQNQIQKSLVPMLRTWTHSIGWTVLLSAALAVLFAMLCDGCSRIH*
Ga0070715_105541352	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MTHTNSAVHQNQIQRSLVPMLRTWTRSIGWTVLLSALLAILFALAVDGCAGIH*
Ga0070716_1002129692	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MTNIESAANQNQIQRSLVPMLRTWTHSIGWTVLLSAALAVLFAMLCEGCSGMR*
Ga0070716_1016935072	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MTHTHSASSQNQIQKSLVPMLRTWAHSIGWTVLLSALLAVLFALAVQGCAGIR*
Ga0070712_1005071583	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	NQIQSSLAPMLRMWTRSIGWTIVISTVMTVLFALLCDGCSGIH*
Ga0070712_1012007341	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MTNIESAAGQNQIQRSLVPMLRTWTHSIGWTILLSAALAVLFAMLCDGCSGMH*
Ga0068871_1005690933	3300006358	Miscanthus Rhizosphere	MTHTGSEINQNQIQKSLVPMLRTWAQTIGWTVLLSATLAILFSMVCDGCANIH*
Ga0066659_108255692	3300006797	Soil	MTHTESAANQNHIQQSLVPMLRTWTHSIGWTILLSAALAVLFAMLCDGCSGIH*
Ga0075426_101424152	3300006903	Populus Rhizosphere	MTRIHSAAGQNQIQKSLVPMLRTWTHNIGWTVLLSAALAVLFAMLCDGCAGLH*
Ga0075426_108775722	3300006903	Populus Rhizosphere	MTHTDSGINQNQIQKSLVPMLRTWTHSIGWTVLLSAALAILFALMVDGCASIH*
Ga0079219_105556443	3300006954	Agricultural Soil	SQRRPNPMTHAQPGANQNQIQRSLVPMLRTWTHSIGWTILLSAALAVLFAMLCDGCSGMH
Ga0099830_101658182	3300009088	Vadose Zone Soil	MMKAELANQNQNQIQKSLVPMLRTWTHSIGSTVLLSALLAILFALALDGCSGLR*
Ga0105240_102687511	3300009093	Corn Rhizosphere	MTTIDSGLNQNQIQRSLVPMLRTWTHSIGWTVLLSTLMAVLFALAVDGCANIH*
Ga0105245_1000220919	3300009098	Miscanthus Rhizosphere	MTTIDAGMNQNQIQRSLVPMLRTWTRSIGWTVLLSAALAVLFALLCDGCSSIH*
Ga0105245_100719516	3300009098	Miscanthus Rhizosphere	MAHTYSAANPNQIQKSLVPMLRTWAQSIGWTVLLSAALAILFSMVCDGCANIH*
Ga0105241_110765651	3300009174	Corn Rhizosphere	MTHTGSGIYQNQIQKSLVPMLRTWAHSIGWTVLLSAALAILFSMVCD
Ga0105237_112801011	3300009545	Corn Rhizosphere	MTHTGSEINQNQIQKSLVPMLRTWAQTIGWTVLLSATLAILFSMVCDGCAGIH*
Ga0105238_100092632	3300009551	Corn Rhizosphere	MTTIDPGINQNQIQRSLVPMLRTWTQSIGWTVLLSTLLAVLFALAVDGCTNIH*
Ga0105238_100495793	3300009551	Corn Rhizosphere	MTHTGSGINQNQIQKSLVPMLRTWAHSIGWTVLLSAALAILFSMVCDGCANIH*
Ga0134125_105414952	3300010371	Terrestrial Soil	MTHTHSAVNKNQIHQSLVPMLRTWARSIGWTVLLSAALAILFAMICDGCSGIH*
Ga0134125_121700111	3300010371	Terrestrial Soil	THTGSGINQNQIQKSLVPMLRTWAHSIGWTVLLSAALAILFSMVCDGCAGIH*
Ga0134128_104768271	3300010373	Terrestrial Soil	MAHTYSAANPNQIQKSLVPMLRTWAQSIGWTVLLSATLAILFSMVCDGCAGIN*
Ga0134128_127627492	3300010373	Terrestrial Soil	MTHTDSAVNQNQVHQSLVPMLRTWIRSIGWTVLLSAALAVLFALLCDGCSGL
Ga0126383_100059129	3300010398	Tropical Forest Soil	MTHTQSAINQNQIQRSLVPMLRTWTHSIGWTVLLSAALAVLFAMLCDGCSGMH*
Ga0137392_102392153	3300011269	Vadose Zone Soil	MMKAELANQNQNQIQKSLVPMLRTWTHSIGWTVLLSALLAILFALALDGCSGLR*
Ga0137393_100201885	3300011271	Vadose Zone Soil	MMKAELANQNQNQIQKSLVPILRTWTHSIGWTVLLSALLAILFALALDGCSGLR*
Ga0126317_102180594	3300011332	Soil	MTHTDSAVNQNQIQKNLVPMLRTWTRCIGWTVLLSALVAILFALLCDGCSGVH*
Ga0137380_101145472	3300012206	Vadose Zone Soil	MTHTESAANQNQIQQSLVPMLRTWTHSIGWTVLLSAALAVLFAMLCDGCSGIH*
Ga0137398_100547623	3300012683	Vadose Zone Soil	MMKAELANQNQNQIQKSLVPMLRTWTRSIGWTVLLSSLLAVLFALALDGCSGLR*
Ga0137398_111810301	3300012683	Vadose Zone Soil	MTHSKPNQNAIQQSLVPMLRVWTRSIGWTVLLSAMLAVLFALICDGCSGLR*
Ga0137395_100113463	3300012917	Vadose Zone Soil	MATEIIAMMKAESAHPNQIQNSLVSMLRTWTHSIGWTIILSTVLAVLFALICDGCFGIH*
Ga0137404_104644601	3300012929	Vadose Zone Soil	MTHTDSVNQIQIQIQKSLVPMLRTWTRSIGWTVLLSALLAILFALALDGCSGLR*
Ga0164300_104183841	3300012951	Soil	QSAANQNQIQRSLVPMLRTWTHSIGWTVLLSAALAVLFAMLCEGCSGMH*
Ga0164298_101762543	3300012955	Soil	PSSKEIKAMTTIDAGMNQNQMQKSLIPMLRTWTRSIGWTVLLSAALAVLFALLCDGCSSIH*
Ga0164303_101870502	3300012957	Soil	MTHTQSAIKQNQIQRSLIPMLRTWTHSIGWTVLLSAALAVLFAMLCDSCSGTR*
Ga0164303_102031482	3300012957	Soil	MTRTDSAVHQNQIQRSLGPMLRTWAHSIGWTILLSTATAVLFAMICNGCSGIH*
Ga0164301_100128146	3300012960	Soil	SKGTNAMTHTDSTLHQNQIQRSLVPMLRTWTRSIGWTVLLSALLAILFALAVNGCASIH*
Ga0164301_100202274	3300012960	Soil	MTHTDSAVHQNQIQRSLGPMLRTWAHSIGWTILLSTATAVLFAMICNGCSGIH*
Ga0164301_100760814	3300012960	Soil	MTTIDSGMIDSGMNQNQIQRSLVPMLRTWTRSIGWTVLLSAALAVLFALLCDGCSSIH*
Ga0164301_103100503	3300012960	Soil	MTHTNSAVHQNQIQRSLVPMLRTWTRGIGWTVLLSALLAILFALAVDGCAGTH*
Ga0164302_100736072	3300012961	Soil	MTTIDAGMNQNQIQKSLVPMLRTWTRSIGWTVLLSAALAVLFAMLCDGCSSIH*
Ga0164302_113361641	3300012961	Soil	MTHTDSAVHQNQIQRSLGPMLRTWAHSIGWTILLSTATAVLFAMICNGCSGIHK
Ga0164309_112276751	3300012984	Soil	MTNIESAANQNQIQRSLVPMLRTWTHSIGWTVLLSALLAVLFALF
Ga0164308_102244552	3300012985	Soil	MTHTDSAVHQNQIQRSLGPMLRTWVHSIGWTILLSTATAVLFAMICNGCSGIH*
Ga0164307_110161173	3300012987	Soil	GVAQQQGDKAMTTIDSGMNQNQIQRSLVPMLRTWTRSIGWTVLLSAALAVLFALLCDGCSSIH*
Ga0137403_102525613	3300015264	Vadose Zone Soil	MMKAELANQNQNQIQKSLVPMLRTWTHSIGWTVLLSALLAILFALALDGCSG
Ga0137408_12353362	3300019789	Vadose Zone Soil	MTHTDSVNQIQIQIQKSLVPMLRTWTRSIGWTVLLSALLAILFALALDGCSGLR
Ga0210400_1000143327	3300021170	Soil	MTHTESANQNQIHQSLVPMLRVWTRSIGWTVLLSALLAVLFALAVDGCAGIR
Ga0126371_114970532	3300021560	Tropical Forest Soil	MTHTESAANPNQIQKGLVPILRTWAHSIGWTVLLSAALAILFALAVDGCAN
Ga0126371_126102512	3300021560	Tropical Forest Soil	MTYTDPAANQNQIHQSLVPMLRTWTRSIGWTVLLSAALAILFAMICDGCSGIH
Ga0126371_136367231	3300021560	Tropical Forest Soil	MTHTQSAIKQNQIQKSLLPMLRTWTHSIGWTVLLSAALAILFAMLCDGCSGMR
Ga0179589_100714362	3300024288	Vadose Zone Soil	MTHTDAGINQNQIQKSFVPMLRTWTHSIGWTIVLSAVLAVIFALICDGCSGVH
Ga0137417_12803742	3300024330	Vadose Zone Soil	MTDTESANQNQIHQSLVPILRVWTRSIGWTVLLSALLAVLFALAVDGCASLR
Ga0207656_102174912	3300025321	Corn Rhizosphere	MTHADSGTNQNQIQKSLVPMLRTWTHSIGWTVLLSAALAILFALAV
Ga0208078_10066043	3300025544	Arctic Peat Soil	MTHTNPAADQNQIQKSLIPMLRTWTHSIGWTILLSAALAILFALLCDGCSGR
Ga0207692_106563052	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MTNIESAAGQNQIQRSLVPMLRTWTHSIGWTVLLSAVLAVLFAMLCDGCSDMR
Ga0207699_105296802	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MTHTNSAVHQNQIQRSLVPMLRTWTRSIGWTVLLSALLAILFALAVDGCAGIH
Ga0207707_101116382	3300025912	Corn Rhizosphere	MTTIDSGINQNQIQRSLVPMLRTWTHSIGWTVLLSTLLAVLFALAVDGCANIH
Ga0207707_114562622	3300025912	Corn Rhizosphere	MTAIDSGMDQNQIQKSLAPMLRTWTRSIGWTVLLSTLLAVLFALAVDGCANIH
Ga0207695_100791762	3300025913	Corn Rhizosphere	MTTIDPGINQNQIQRSLVPMLRTWTQSIGWTVLLSTLLAVLFALAVDGCANIH
Ga0207671_103588552	3300025914	Corn Rhizosphere	MTHTDSGTNQSQIQKSLVPMLRTWTHSIGWTVLLSAALAILFALAVDGCSSIH
Ga0207671_104565162	3300025914	Corn Rhizosphere	MTHTGSEINQNQIQKSLVPMLRTWAQTIGWTVLLSATLAILFSMVCDGCAGIH
Ga0207660_102866133	3300025917	Corn Rhizosphere	AEAQHMTHTDSGINQNQIQKSLVPMLRTWTHSIGWTVLLSAALAILFALLLDGCSGVH
Ga0207660_103300891	3300025917	Corn Rhizosphere	MTTIDSGINQNQIQRSLVPMLRTWTQSIGWTVLLSTLLAVLFALAVDGCANIH
Ga0207652_102342811	3300025921	Corn Rhizosphere	DSGINQNQIQRSLVPMLRTWTHSIGWTVLLSTLLAVLFALAVDGCANIH
Ga0207694_101810103	3300025924	Corn Rhizosphere	MTHTGSGINQNQIQKSLVPMLRTWAHSIGWTVLLSAALAILFSMVCDGCAGIH
Ga0207694_103162511	3300025924	Corn Rhizosphere	MTHTDSGTNQSQIQKSLVPMLRTWTHGIGWTVLLSAALAILFALAVDGCSSIH
Ga0207687_100268773	3300025927	Miscanthus Rhizosphere	MTTIDAGMNQNQIQRSLVPMLRTWTRSIGWTVLLSAALAVLFALLCDGCSSIH
Ga0207700_103952342	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MTHTDSATHPNQIQRSLVPMLRTWTHSIGWTVLLSAALAVLFALAVDGCSGVH
Ga0207700_114036011	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MTTIDSGMNQNQIQRSLIPMLRTWTRSIGWTVLLSAALAVLFAMVCDGCS
Ga0207664_101529682	3300025929	Agricultural Soil	MTTIDSRMNQNQIQKSLVPMLRTWTRSIGWTVLLSAALAVLFAMVCDGCSSIH
Ga0207664_112046482	3300025929	Agricultural Soil	MTTIDSGMNQNQIQRSLIPMLRTWTRSIGWTVLLSAALAVLFAM
Ga0207665_113683651	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MTHTHSASSQNQIQKSLVPMLRTWAHSIGWTVLLSALLAVLFALAVQGCAGIR
Ga0209240_11412762	3300026304	Grasslands Soil	MAHSDPAVSQNQIHKSLVPMLRTWTHSIGWTVVLSALLAILFAMALDGCSKVR
Ga0209647_10062791	3300026319	Grasslands Soil	MIKAESAHPNQIQQSLGPMLRTWTHSIGWTIILSTVMAILFALICDGCFGIH
Ga0209004_10070912	3300027376	Forest Soil	MTHTESAVNQNQIHQSLVPMLRTWIRSIGWTVLLSAALAVLFAMICDGCSGIH
Ga0209060_100012453	3300027826	Surface Soil	MTTIDSGMNQNQIQRSLVPMLRTWTRSIGWTVLLSAALAILFALLCDGCSNIH
Ga0209580_100210413	3300027842	Surface Soil	MTPIESGMNQNQIQKSLVPMLRTWAHSIGWTVLLSAALAILFALLCDGCSNIH
Ga0209580_102844813	3300027842	Surface Soil	MTHTHPAADQNQIQRSLVPMLRTWTHSIGWTVLLSAGLAVLFAMLCDGCSGIH
Ga0209166_100260004	3300027857	Surface Soil	MTHIHSAAGQNQIQKSLVPMLRTWTHSIGWTVLLSAALAVLFAMLCDGCAGLH
Ga0170834_1010416282	3300031057	Forest Soil	MTHTHSESNQNQIQKSLVPMLRTWAHSIGWTVLLSALLAVLFALAVQGCAGIH
Ga0170820_163135993	3300031446	Forest Soil	MTHTNSGINENQIRKSLVPMLRTWAHSIGWTVLLSALLAVLFALAVQGCAGIR
Ga0170818_1149313813	3300031474	Forest Soil	MTHTHSERNQNQIQKSLVPMLRTWAHSIGWTVLLSALLAVLFALAVQGCAGIR
Ga0308175_1005519412	3300031938	Soil	MTAIDSGINQNQIQRSLVPMLRTWTHSIGWTVLLSTLLAVLFALAVDGCANIH
Ga0307470_110978571	3300032174	Hardwood Forest Soil	MTHTESPTQNPLNKSLVPMLRVWTHAISWTIILSALVAVLFALLCDGCSGVH
Ga0316624_100849682	3300033486	Soil	MTPTHPAADQNQIQRSLVPMLRTWTHSIGWTVLLSAALAVLFAMLCDGCSGIH

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F059416

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences