Metagenome / Metatranscriptome Family F059410

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F059410
Family Type	Metagenome / Metatranscriptome
Number of Sequences	134
Average Sequence Length	105 residues
Representative Sequence	MERDDDLTALPLVDDPTVKDVFAEFCTGLNFVHGNLHMTFASVTADHSANRASSKRIVSARIVMPIIGAIELRDLLTQLIDALTEQGVITSEAPLPTIVTPPGRPH
Number of Associated Samples	100
Number of Associated Scaffolds	134

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	65.67 %
% of genes near scaffold ends (potentially truncated)	45.52 %
% of genes from short scaffolds (< 2000 bps)	86.57 %
Associated GOLD sequencing projects	90
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.41

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (53.731 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (50.000 % of family members)
Environment Ontology (ENVO)	Unclassified (41.045 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (70.149 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 24.63% β-sheet: 21.64% Coil/Unstructured: 53.73%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.41
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.41
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 134 Family Scaffolds
PF00126	HTH_1	20.15
PF16983	MFS_MOT1	10.45
PF00528	BPD_transp_1	3.73
PF13384	HTH_23	2.24
PF12849	PBP_like_2	2.24
PF13801	Metal_resist	1.49
PF13610	DDE_Tnp_IS240	1.49
PF07690	MFS_1	1.49
PF03551	PadR	0.75
PF00583	Acetyltransf_1	0.75
PF09278	MerR-DNA-bind	0.75
PF06742	DUF1214	0.75
PF13586	DDE_Tnp_1_2	0.75
PF00042	Globin	0.75
PF00211	Guanylate_cyc	0.75
PF12727	PBP_like	0.75
PF13417	GST_N_3	0.75
PF07813	LTXXQ	0.75
PF06863	DUF1254	0.75
PF03773	ArsP_1	0.75
PF01545	Cation_efflux	0.75
PF09948	DUF2182	0.75

COG ID	Name	Functional Category	% Frequency in 134 Family Scaffolds
COG3678	Periplasmic chaperone Spy, Spy/CpxP family	Posttranslational modification, protein turnover, chaperones [O]	2.99
COG5361	Uncharacterized conserved protein	Mobilome: prophages, transposons [X]	1.49
COG0053	Divalent metal cation (Fe/Co/Zn/Cd) efflux pump	Inorganic ion transport and metabolism [P]	0.75
COG0701	Uncharacterized membrane protein YraQ, UPF0718 family	Function unknown [S]	0.75
COG0789	DNA-binding transcriptional regulator, MerR family	Transcription [K]	0.75
COG1017	Hemoglobin-like flavoprotein	Energy production and conversion [C]	0.75
COG1230	Co/Zn/Cd efflux system component	Inorganic ion transport and metabolism [P]	0.75
COG1695	DNA-binding transcriptional regulator, PadR family	Transcription [K]	0.75
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	0.75
COG1846	DNA-binding transcriptional regulator, MarR family	Transcription [K]	0.75
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	0.75
COG3965	Predicted Co/Zn/Cd cation transporter, cation efflux family	Inorganic ion transport and metabolism [P]	0.75
COG5402	Uncharacterized protein, contains DUF1214 domain	Function unknown [S]	0.75

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	53.73 %
Unclassified	root	N/A	46.27 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	53.73 %
Unclassified	root	N/A	46.27 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	53.73 %
Unclassified	root	N/A	46.27 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	47.01 %
Unclassified	root	N/A	46.27 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.27 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	38.06 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.27 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	8.21 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	7.46 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	4.48 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	1.49 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.27 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	6.72 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4.48 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2.99 %
unclassified Rhodospirillales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales	0.75 %
Rhodobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	0.75 %
Azospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.27 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4.48 %
Roseicella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseicella	3.73 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.99 %
Granulibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Granulibacter	1.49 %
Rhodospirillales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	0.75 %
Azospirillum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum	0.75 %
Rhodobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.27 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4.48 %
unclassified Roseicella	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseicella → unclassified Roseicella	3.73 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	2.99 %
Granulibacter bethesdensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Granulibacter → Granulibacter bethesdensis	1.49 %
unclassified Azospirillum	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum → unclassified Azospirillum	0.75 %
Rhodospirillales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	0.75 %
Rhodobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.27 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4.48 %
Roseicella sp. DB1501	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseicella → unclassified Roseicella → Roseicella sp. DB1501	3.73 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	2.99 %
Granulibacter bethesdensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Granulibacter → Granulibacter bethesdensis	1.49 %
Azospirillum sp. OGB3	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum → unclassified Azospirillum → Azospirillum sp. OGB3	0.75 %
Rhodospirillales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	0.75 %
Rhodobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	0.75 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300003505\|JGIcombinedJ51221_10096313	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1173	Open in IMG/M
3300004080\|Ga0062385_10119877	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1310	Open in IMG/M
3300004082\|Ga0062384_100826678	All Organisms → cellular organisms → Bacteria → Proteobacteria	649	Open in IMG/M
3300004091\|Ga0062387_100314852	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	1015	Open in IMG/M
3300005332\|Ga0066388_108839181	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Granulibacter → Granulibacter bethesdensis	500	Open in IMG/M
3300005434\|Ga0070709_10039447	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2897	Open in IMG/M
3300005444\|Ga0070694_101298043	Not Available	612	Open in IMG/M
3300005610\|Ga0070763_10312379	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Granulibacter → Granulibacter bethesdensis	867	Open in IMG/M
3300005921\|Ga0070766_10144104	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1452	Open in IMG/M
3300006163\|Ga0070715_10091645	All Organisms → cellular organisms → Bacteria → Proteobacteria	1400	Open in IMG/M
3300006175\|Ga0070712_100592217	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	938	Open in IMG/M
3300006176\|Ga0070765_100641095	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1002	Open in IMG/M
3300006893\|Ga0073928_10632720	Not Available	752	Open in IMG/M
3300007788\|Ga0099795_10537668	Not Available	549	Open in IMG/M
3300009143\|Ga0099792_10653910	Not Available	675	Open in IMG/M
3300010048\|Ga0126373_11659652	All Organisms → cellular organisms → Bacteria → Proteobacteria	703	Open in IMG/M
3300010366\|Ga0126379_13490632	Not Available	526	Open in IMG/M
3300010371\|Ga0134125_13087580	Not Available	504	Open in IMG/M
3300010376\|Ga0126381_101801005	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	884	Open in IMG/M
3300010376\|Ga0126381_101990732	All Organisms → cellular organisms → Bacteria → Proteobacteria	837	Open in IMG/M
3300010376\|Ga0126381_104210693	Not Available	558	Open in IMG/M
3300010376\|Ga0126381_104497925	Not Available	538	Open in IMG/M
3300012189\|Ga0137388_11529947	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	604	Open in IMG/M
3300012951\|Ga0164300_10590549	Not Available	653	Open in IMG/M
3300012958\|Ga0164299_10522161	Not Available	795	Open in IMG/M
3300012961\|Ga0164302_10656752	Not Available	770	Open in IMG/M
3300012971\|Ga0126369_11254951	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	831	Open in IMG/M
3300012987\|Ga0164307_11515705	Not Available	567	Open in IMG/M
3300012988\|Ga0164306_10585521	Not Available	872	Open in IMG/M
3300016294\|Ga0182041_10349932	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1242	Open in IMG/M
3300016319\|Ga0182033_11074589	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	718	Open in IMG/M
3300016319\|Ga0182033_11903014	Not Available	541	Open in IMG/M
3300016341\|Ga0182035_10313714	All Organisms → cellular organisms → Bacteria → Proteobacteria	1291	Open in IMG/M
3300016341\|Ga0182035_11354790	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseicella → unclassified Roseicella → Roseicella sp. DB1501	638	Open in IMG/M
3300016357\|Ga0182032_11476257	Not Available	590	Open in IMG/M
3300016371\|Ga0182034_10323542	Not Available	1244	Open in IMG/M
3300016371\|Ga0182034_11260371	Not Available	644	Open in IMG/M
3300016371\|Ga0182034_11332655	Not Available	627	Open in IMG/M
3300016387\|Ga0182040_10276745	Not Available	1273	Open in IMG/M
3300016422\|Ga0182039_11407197	Not Available	634	Open in IMG/M
3300016445\|Ga0182038_10395400	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1157	Open in IMG/M
3300016445\|Ga0182038_10855734	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseicella → unclassified Roseicella → Roseicella sp. DB1501	799	Open in IMG/M
3300020579\|Ga0210407_10091715	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2299	Open in IMG/M
3300020579\|Ga0210407_10092253	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2293	Open in IMG/M
3300020579\|Ga0210407_10108973	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2109	Open in IMG/M
3300020579\|Ga0210407_10358328	All Organisms → cellular organisms → Bacteria → Proteobacteria	1141	Open in IMG/M
3300020579\|Ga0210407_11227862	Not Available	563	Open in IMG/M
3300020580\|Ga0210403_10130862	All Organisms → cellular organisms → Bacteria	2046	Open in IMG/M
3300020580\|Ga0210403_10189549	All Organisms → cellular organisms → Bacteria	1686	Open in IMG/M
3300020580\|Ga0210403_10752982	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	777	Open in IMG/M
3300020581\|Ga0210399_10521510	Not Available	987	Open in IMG/M
3300020581\|Ga0210399_11186647	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	607	Open in IMG/M
3300020582\|Ga0210395_11273166	Not Available	539	Open in IMG/M
3300020583\|Ga0210401_10063118	All Organisms → cellular organisms → Bacteria	3488	Open in IMG/M
3300020583\|Ga0210401_10080241	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3071	Open in IMG/M
3300020583\|Ga0210401_11190926	Not Available	620	Open in IMG/M
3300021168\|Ga0210406_10040529	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4135	Open in IMG/M
3300021170\|Ga0210400_10476116	Not Available	1030	Open in IMG/M
3300021170\|Ga0210400_10677818	All Organisms → cellular organisms → Bacteria	848	Open in IMG/M
3300021171\|Ga0210405_10150760	All Organisms → cellular organisms → Bacteria	1841	Open in IMG/M
3300021178\|Ga0210408_10836086	Not Available	719	Open in IMG/M
3300021181\|Ga0210388_10142839	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2076	Open in IMG/M
3300021403\|Ga0210397_10768344	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	743	Open in IMG/M
3300021405\|Ga0210387_11221035	Not Available	652	Open in IMG/M
3300021405\|Ga0210387_11679105	Not Available	538	Open in IMG/M
3300021406\|Ga0210386_11065529	Not Available	687	Open in IMG/M
3300021407\|Ga0210383_11673175	Not Available	522	Open in IMG/M
3300021420\|Ga0210394_10875327	Not Available	782	Open in IMG/M
3300021432\|Ga0210384_10137984	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2189	Open in IMG/M
3300021432\|Ga0210384_11758474	Not Available	525	Open in IMG/M
3300021433\|Ga0210391_10802909	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	736	Open in IMG/M
3300021474\|Ga0210390_11513648	Not Available	531	Open in IMG/M
3300021477\|Ga0210398_10951543	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	687	Open in IMG/M
3300021559\|Ga0210409_11726954	Not Available	502	Open in IMG/M
3300021560\|Ga0126371_13310491	Not Available	545	Open in IMG/M
3300022533\|Ga0242662_10159896	Not Available	687	Open in IMG/M
3300022557\|Ga0212123_10727780	Not Available	607	Open in IMG/M
3300022724\|Ga0242665_10365854	Not Available	520	Open in IMG/M
3300022726\|Ga0242654_10112665	Not Available	868	Open in IMG/M
3300025939\|Ga0207665_10321827	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1161	Open in IMG/M
3300026340\|Ga0257162_1005899	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1399	Open in IMG/M
3300026489\|Ga0257160_1002645	All Organisms → cellular organisms → Bacteria → Proteobacteria	1983	Open in IMG/M
3300026496\|Ga0257157_1025818	Not Available	963	Open in IMG/M
3300026508\|Ga0257161_1028323	Not Available	1093	Open in IMG/M
3300027173\|Ga0208097_1008742	Not Available	1086	Open in IMG/M
3300027729\|Ga0209248_10016461	All Organisms → cellular organisms → Bacteria → Proteobacteria	2317	Open in IMG/M
3300027889\|Ga0209380_10100915	All Organisms → cellular organisms → Bacteria → Proteobacteria	1667	Open in IMG/M
3300028906\|Ga0308309_10332781	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1291	Open in IMG/M
3300031545\|Ga0318541_10108850	Not Available	1495	Open in IMG/M
3300031545\|Ga0318541_10596904	All Organisms → cellular organisms → Bacteria	618	Open in IMG/M
3300031546\|Ga0318538_10100064	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	1495	Open in IMG/M
3300031546\|Ga0318538_10430287	Not Available	714	Open in IMG/M
3300031573\|Ga0310915_11044262	Not Available	569	Open in IMG/M
3300031668\|Ga0318542_10120934	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1281	Open in IMG/M
3300031708\|Ga0310686_100281085	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	1516	Open in IMG/M
3300031708\|Ga0310686_110864395	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1793	Open in IMG/M
3300031719\|Ga0306917_10441477	Not Available	1019	Open in IMG/M
3300031724\|Ga0318500_10730318	Not Available	506	Open in IMG/M
3300031736\|Ga0318501_10251187	Not Available	935	Open in IMG/M
3300031748\|Ga0318492_10277942	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	869	Open in IMG/M
3300031751\|Ga0318494_10257952	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseicella → unclassified Roseicella → Roseicella sp. DB1501	1001	Open in IMG/M
3300031753\|Ga0307477_10803578	Not Available	625	Open in IMG/M
3300031754\|Ga0307475_10925448	All Organisms → cellular organisms → Bacteria	688	Open in IMG/M
3300031770\|Ga0318521_10216713	All Organisms → cellular organisms → Bacteria	1110	Open in IMG/M
3300031770\|Ga0318521_10888268	Not Available	544	Open in IMG/M
3300031771\|Ga0318546_10378513	Not Available	987	Open in IMG/M
3300031805\|Ga0318497_10626200	Not Available	603	Open in IMG/M
3300031821\|Ga0318567_10190373	All Organisms → cellular organisms → Bacteria → Proteobacteria	1144	Open in IMG/M
3300031833\|Ga0310917_10242828	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1211	Open in IMG/M
3300031846\|Ga0318512_10536594	Not Available	594	Open in IMG/M
3300031879\|Ga0306919_11473538	Not Available	513	Open in IMG/M
3300031890\|Ga0306925_11095830	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	805	Open in IMG/M
3300031897\|Ga0318520_11032417	Not Available	520	Open in IMG/M
3300031910\|Ga0306923_10158236	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2587	Open in IMG/M
3300031910\|Ga0306923_11653385	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseicella → unclassified Roseicella → Roseicella sp. DB1501	663	Open in IMG/M
3300031941\|Ga0310912_10006984	All Organisms → cellular organisms → Bacteria → Proteobacteria	6928	Open in IMG/M
3300031941\|Ga0310912_11306150	Not Available	550	Open in IMG/M
3300031941\|Ga0310912_11321668	All Organisms → cellular organisms → Bacteria	546	Open in IMG/M
3300031945\|Ga0310913_11113350	Not Available	551	Open in IMG/M
3300031946\|Ga0310910_10073913	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2468	Open in IMG/M
3300031946\|Ga0310910_10249202	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum → unclassified Azospirillum → Azospirillum sp. OGB3	1388	Open in IMG/M
3300031947\|Ga0310909_10146606	All Organisms → cellular organisms → Bacteria → Proteobacteria	1938	Open in IMG/M
3300031954\|Ga0306926_10154556	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2842	Open in IMG/M
3300032001\|Ga0306922_12257450	Not Available	523	Open in IMG/M
3300032041\|Ga0318549_10264907	Not Available	774	Open in IMG/M
3300032059\|Ga0318533_10803357	Not Available	690	Open in IMG/M
3300032059\|Ga0318533_10819595	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseicella → unclassified Roseicella → Roseicella sp. DB1501	683	Open in IMG/M
3300032076\|Ga0306924_10182259	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2410	Open in IMG/M
3300032076\|Ga0306924_10350429	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1693	Open in IMG/M
3300032076\|Ga0306924_12071060	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	584	Open in IMG/M
3300032261\|Ga0306920_100065745	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5303	Open in IMG/M
3300032261\|Ga0306920_100178578	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3167	Open in IMG/M
3300032261\|Ga0306920_103308963	Not Available	601	Open in IMG/M
3300032261\|Ga0306920_103356342	Not Available	596	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	95.52%
Aquatic	Environmental → Aquatic	4.48%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	95.52%
Freshwater	Environmental → Aquatic → Freshwater	2.99%
Thermal Springs	Environmental → Aquatic → Thermal Springs	1.49%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	85.82%
Loam	Environmental → Terrestrial → Soil → Loam	9.70%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	2.99%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	1.49%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	71.64%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	14.18%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.97%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.73%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	2.99%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	1.49%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	50.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	20.15%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	5.97%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.22%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	3.73%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.73%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	2.99%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.24%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	1.49%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.49%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.49%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.75%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.75%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022533	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-7-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300022724	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022726	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026340	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-04-A	Environmental	Open in IMG/M
3300026489	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-11-A	Environmental	Open in IMG/M
3300026496	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-69-A	Environmental	Open in IMG/M
3300026508	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-01-A	Environmental	Open in IMG/M
3300027173	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF036 (SPAdes)	Environmental	Open in IMG/M
3300027729	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGIcombinedJ51221_100963132	3300003505	Forest Soil	MERDDDLTALPLVDDPTVKDVFAEFCTGLNFVHGNLHMTFASVTADHSANRASSKRIVSARIVMPIIGAIELRDLLTQLIDALTEQGVITSEAPLPTIVTPPGRPH*
Ga0062385_101198771	3300004080	Bog Forest Soil	MERADDLTALPIVDDGTVKDSFAEFCTGVNFVHGNLHMTFASVTADHSAHEAPSRRVVSARIVMPIIGAIELRDLLTHLIDALTEQGMIVPETLTTTVMPPGRRH*
Ga0062384_1008266782	3300004082	Bog Forest Soil	ERADDLTALPIVDDGTVKDSFAEFCTGVNFVHGNLHMTFASVTADHSAHEAPSRRVVSARIVMPIIGAIELRDLLTHLIDALTEQGMIVPETLTTTVMPPGRRH*
Ga0062387_1003148523	3300004091	Bog Forest Soil	MEHDDDLAALPLIDDPTVKDVFAEFCTGLNFVHGNLHMTFASVTADHSLPQAPSKRIVSARIVMPITGAIELRDLLTQLIDALTEQGVVIPETPLPTIVTPPGRPH*
Ga0066388_1088391811	3300005332	Tropical Forest Soil	MVHDDDLTALPLIDDPTVKDVFAEFCTGLNFVHGNLHMTFASVTADHSAQQAASKRMVSARIVMPVIGAIELRDLLTQLIDALTEQGVIIPETPLPTIVTPPSRPH*
Ga0070709_100394471	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MMSLKDKWVVERDDDLTALPLVDDPTVKDVFAEFCTGLNFVHGNLHMTFASVTADHSANRASSKRIVSARIVMPIIGAIELRDLLTQLIDALTEQGVITSEAPLPTIVTPPGRPH*
Ga0070694_1012980431	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	VAKDKWVMERDDDLTALPLVDDPTVKDVFAEFCTGLNFVHGNLHMTFASVTADHSANRASSKRIVSARIVMPIIGAIELRDLLTQLIDALTEQGVITSEAPLPTIVTPPGRPH*
Ga0070763_103123791	3300005610	Soil	MEHDDDLTALPLVDDPTVKDVFAEFCTGLNFVHGNLHMTFASVTADHSANRASSKRIVSARIVMPIIGAIELRDLLTQLIDALTEQGVITSEAPLPTIVT
Ga0070766_101441042	3300005921	Soil	MEHDDDLTALPLVDDPTVKDVFAEFCTGLNFVHGNLHMTFASVTADHSANRASSKRIVSARIVMPIIGAIELRDLLTQLIDALTEQGVITSEAPLPTIVTPPGRPH*
Ga0070715_100916451	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	PNIYGDITAHLDDVAKDKWVMERDDDLTALPLVDDPTVKDVFAEFCTGLNFVHGNLHMTFASVTADHSANRASSKRIVSARIVMPIIGAIELRDLLTQLIDALTEQGVITSEAPLPTIVTPPGRPH*
Ga0070712_1005922171	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MDTDRSALPVIDDVTVKDVFADFCMGLNFVHGNLHMTFASVTADHSIDDAPPRRIVSARIVMPITGAVELRDLLTQVIDALTAQGVIVPGTPSPTVMTPPGARPH*
Ga0070765_1006410952	3300006176	Soil	MERDHDLTALPLVDDPTVKDVFAEFCTGLNFVHGNLHMTFASVTADHSANRASSKRIVSARIVMPIIGAIELRDLLTQLIDALTEQGVITSEAPLPTIVTPPGRPH*
Ga0073928_106327202	3300006893	Iron-Sulfur Acid Spring	MEHDDDLAALPLVDDPAVKDVFAEFCTGLNFVHGNLHMTFASVTADYSSPQAPSKRIVSARIVMPIIGAIELRDLLTQLTDTLIEQGVIIPETPLSTIVTPPGRPH*
Ga0099795_105376682	3300007788	Vadose Zone Soil	LPSVNDLTVKDVFAEFCTGLNFVHGNLYMTFASVTADHSANRASSKRIVSARIVMPIIGAIELRDLLTQLIDALTEQGVITSEAPLPTIVTPPGRPH*
Ga0099792_106539102	3300009143	Vadose Zone Soil	MTQAEDLTSLPLVDDVTVKDAFAEFCTGLHFVHGNLHMTFASVTADHSAQQTPSKRVVSARIVMPIIGAIELRDLLTQLISALTAQGVITPEPPLPTVMMPPGRPH*
Ga0126373_116596522	3300010048	Tropical Forest Soil	MIEDDFAQLPLVDDATVKEAFAEFCTGLNFVHGNLHMTFASVTADHSSADAPSRRIVSARITMPIIGAIELRDLLTQLIDALTAQGVIIPETPSPTVVTPRGRPH*
Ga0126379_134906321	3300010366	Tropical Forest Soil	MNQDDFAQLPLVDDATVKEAFAEFCTGLNFVHGNLHMTFASVTADHSSPDAASKRIVSARIAMPIIGAIELRDLLTQLIDALTAQGVIIPETPSPTVVTPRGRPH*
Ga0134125_130875801	3300010371	Terrestrial Soil	MERDDDLTALPLVDDPTVKDVFAEFCTGLNFVHGNLHITFASVTADHSANRASSKRIVSARIVMPIIGAIELRDLLTQLIDALTEQ
Ga0126381_1018010052	3300010376	Tropical Forest Soil	MIEDDFAQLPLVDDFTVKEAFAEFCAGLNFVHGNLHMTFASVTADHSSADAPSRRIVSARITMPIIGAIELRDLLTQLIDALTAQGVIIPETPSPTVVTPRGRPH*
Ga0126381_1019907321	3300010376	Tropical Forest Soil	MSTMIQRTKWGMKHDDLTALPLIDDPTVKDVFAEFCTGLNFVHGNLHMTFASVTADHTVPQAETKRIVSARIVMPIIGAIELRDLLTLLINTLTEQGVIIPETPLPTLVTPPGRPH
Ga0126381_1042106931	3300010376	Tropical Forest Soil	RYNGCAMMTEGSRVMEGYDDFSTLPLVDDVAVKDVFAEFCTGLHFVHGNLHITFASVTADHGSEEASSKRVVSGRIVIPITGAIELRNLLTQIIDALKAQGVITLEPPLPTVMVPPGRPH
Ga0126381_1044979251	3300010376	Tropical Forest Soil	TVSVALGGGMLMGHTDRSSALPLVDDGTVKDSFADFCTGLNFAHGNVHMSFASLTADHSRDDTPSKRVVSARIVMPITGAIELRDLLTEIIDALTAQGVIIPELPSPTIITPPGRPH*
Ga0137388_115299472	3300012189	Vadose Zone Soil	MAQSTTQIAVLPLIDDVTVKDSFGDFCTGVNFTNGNVHITFASITTDHSREPAPQRRVVSARVVIPLPGAVELRDLLTRIFEALTAQGIIVPTPSPPTVVTPPSRPN*
Ga0164300_105905492	3300012951	Soil	IIGRNGPNIYGDITAHLDDVAQDKWVMERDDDLTALPLVDDPTVKDVFAEFCTGLNFVHGNLHMTFASVTADHSANRASSKRIVSARIVMPIIGAIELRDLLTQLIDALTEQGVITSEAPLRTILTPPGRPH*
Ga0164299_105221612	3300012958	Soil	MERDDDLMALPLVDDPTVKDVFAEFCTGLNFVHGNLHMTFASVTADHSANRASSKRIVSARIVMPIIGAIELRDLLTQLIDALTEQGVITSEAPLPNIVTPPGRPH*
Ga0164302_106567522	3300012961	Soil	MERDDDLTALPLVDDPTVKDVFAEFCTGFNFVHGNLHMTFASVTADHSANRASSKRIVSARIVMPIIGAIELRDLLTQLIDALTEQGVITSEAPLPTIVTPPGRPH*
Ga0126369_112549512	3300012971	Tropical Forest Soil	MIQDDFSQLPLVDDPTVKEAFAEFCTGFNFVHGSLHMTFATVTADHSSPDAKSKRTVSARIAMPIIGAIELRDLLTQLIDALTRQGVNTPETPSPTMVTPRGQPH*
Ga0164307_115157051	3300012987	Soil	MLSRKDKWVVERDDDLTALPLVDDPTVKDVFAEFCTGLNFVHGNLHMTFASVTADHSANLASSKRIVSARIVMPIIGAIELRDLLTQLIDALTEQGVITSEAPLPTIVTPPGRPH*
Ga0164306_105855211	3300012988	Soil	MERDDDLTALPLVDDPTVKDVFAEFRTGLNFVHGNLHMTFASVTADHSANRASSKRIVSARIVMPIIGAIELRDLLTQLIDALTEQGVITSEAPLPTIVTPPGRPH*
Ga0182041_103499322	3300016294	Soil	MTLQRMKWVMGHDDDLTTLSLVNHPSVKDAFAEFCTGLNFVHGNVHMTFASVTADHGSPQAPSKRIVSARIVMPIIGAIELRDLLTQLIDALTAQGVIIPETPVPTIVTPQGRPH
Ga0182033_110745891	3300016319	Soil	VKDVFAEFCTGLNSVHGNVHMTFASVTADHSSPRASSKRIVSARIVMPIIGAIERRDLLTQLIDALTAQGVITRELPPTIVVPPGRPH
Ga0182033_119030141	3300016319	Soil	MERDDDLTALPLVDDPTVKDVFAEFCTGLNFVHGNLHMTFASVTADHSANRASSKRIVSARIVMPIIGAIELRDLLTQLIDALTEQG
Ga0182035_103137143	3300016341	Soil	LTALPLVDDPTVKDVFAEFCTGLNFVHGNLHMTFASVTADHSADRAPSKRIVSARIVMPIIGALELRDLPTRLIDALTQHGVIISEAPLPTIVTPPGRPH
Ga0182035_113547901	3300016341	Soil	LVGHTDRSSTLPLADDGTVKDSFADFCTGLNFAHGNVHMTFASLTADHARDDAPSKRVVSARIVMPITGAIELRDLLTEIINALTAQGVIIPELPSPTIITPPGRPH
Ga0182032_114762572	3300016357	Soil	MEPADDPSALPIVDDIKVKDTFAEFCTGLNFVHGNVHMTFASVTADHNSHQASSKRVISARIVMPVIGATELRDLLTQLIDALTAEGV
Ga0182034_103235422	3300016371	Soil	LTALPLIDDPTVKDVFVEVCTGLNFVHGNLHMTFASVTADHSAPQTASKRIVSARIVMPIIGAIELRDLLTQLIDALTEQGVIIPETPLPTLVMPPGRPH
Ga0182034_112603712	3300016371	Soil	MERQSKRRPPERTASMTMQRTKCVMERDDDLTALSLANDPSVKDAFAEFCTGLNFAHGNVHMTFASVTADHGSPQAPSKRIVSARIVMPIIGAMELRDLLTQLIDALTAQGVIIPETPVPTIVTPQGRPH
Ga0182034_113326552	3300016371	Soil	FPLINDPTVKDVFAECCAGVNFVHGNLHMTFAAITADHSSSQAPSKRVVSARIVMPIIGVIELSDTLTHLIDALTEQGVILPEAPLLVPPGRPR
Ga0182040_102767451	3300016387	Soil	MEPADDPSALPIVDDIKVKDTFAEFCTGLNFVHGNVHMTFASVTADHNSHQASSKRVISARIVMPVIGATELRDLLTQLIDALTAEGVIIPEAPLPIMVVPP
Ga0182039_114071972	3300016422	Soil	MERDDDLTALSLANDPSVKDAFAEFCTGLNFVHGNVHMTFASVTADHGSPQAPSKRIVSARIVMPIIGAIELRDLLTQLIDALTAQGVIIPETPVPTIVTPQGRPH
Ga0182038_103954003	3300016445	Soil	DVAKDKWVMERDDDLTALPLVDDPTVKGVFAEFCTGLNFVHGNLHMTFASVTADHSANRASSKRIVSARIVMPIIGAIELRDLLTQLIDALTEQGVISEASLPTIVMPPGPPH
Ga0182038_108557342	3300016445	Soil	DPSALPIVDDIKVKDTFAEFCTGLNFVHGNVHMTFASVTADHGSPQAPSKRIVSARIVMPIIGAIELRDLLTQLIDALTAQGVIIPETPVPTIVTPQGRPH
Ga0210407_100917151	3300020579	Soil	KDVFAEFCTGLNFVHGNLHMTFASVTADHSANRASSKRIVSARIVMPIIGAIELRDLLTQLIDALTEQGVITSEAPLPTIVTPPGRPH
Ga0210407_100922533	3300020579	Soil	MDTDRSALPLIDDVTVKDVFTDFCTGLNFVHGNLHMTFASVTADHSIDDAPPRRIVSARIVMPITGAVELRDLLTQVLDALTAQGEIVPETPSPTVMTPPGGRPH
Ga0210407_101089732	3300020579	Soil	MERDDDLTALPLVDDPTVKDVFAEFCTGLNFVHGNLHMTFASVTADHSANRASSKRIVSARIVMPIIGAIELRDLLTQLIDALTEQGVIISEAPLPTIVAPPGRPH
Ga0210407_103583282	3300020579	Soil	MEHDDDLAALPLVDDAAVKEVFAEFCTGLNFVHGNLHMTFASVTADYSSPQAPSKRMVSARIVMPIIGAIELRDLLTQLIDTLTEQGVIIRETPLSTIVTPPGRPH
Ga0210407_112278621	3300020579	Soil	LEHDDDLAALPLVDDPAVKDVFAEFCTGLNFVHGNLHMTFASVTADYNSPQAPSKRIVSARIVMPIIGAIELRDLLTQLIDTLTEQGVIIPETS
Ga0210403_101308623	3300020580	Soil	MEHDDDLAALPLVDDAAVKEVFAEFCTGLNFVHGNLHMTFASVTADYSSPRAPSKRIVSARIVMPIIGAIELRDLLTQLIDTLTEQGVIIPETPLSAIVTPPGRPH
Ga0210403_101895491	3300020580	Soil	MERDDDLTALPLVDDPTVKDVFAEFCTGLNFVHGNLHMTFASVTADHSANLASSKRIVSARIVMPIIGAIELRDLLTQLIDALTEQGV
Ga0210403_107529821	3300020580	Soil	MIENDFAQLPLVDDFTVKEAFAEFCAGLNFVHGNLHMTFASVTADHSSPDASSKRIVSARIAMPIIGAIELRDLLTQLIDALTAQGVIIPETPS
Ga0210399_105215102	3300020581	Soil	MEHDDDLAALPLVDDPAVKDVFAEFCTGLNFVHGNLHMTFASVTADYNSPQAPSKRIVSARIVMPIIGAIELRDLLTQLIDTLTEQGVIIRETPLSTIVTPPGRPH
Ga0210399_111866471	3300020581	Soil	MDTDRSALPVIDDVTVKDVFADFCTGLNFVHGNLHMTFASVTADHSIDDAPPRRIVSARIVMPITGAVELRDLLTQVIDALTAQGVIVPGTPSPTVMTPPGARPH
Ga0210395_112731661	3300020582	Soil	NIDSDRTAHVEDDAKVKGIEHDDDLAALPLVDDPAVKDVFAEFCTGLNFVHGNLRMTFASVTADYNSPQAPSKRIVSARIVMPIIGAIELRDLLTQLIDTLTEQGVIIRETPLSTIVTPPGRPH
Ga0210401_100631184	3300020583	Soil	MIENDFAQLPLVDDFTVKEAFAEFCAGLNFVHGNLHMTFASVTADHSSPDAPSKRIVSARIAMPIIGAIELRDLLTQLIDALTAQGVIIPETPSPTVVTPRGRPH
Ga0210401_100802412	3300020583	Soil	MERDDDLTALPLVDDPTVKDVFAEFCTGLNFVHGNLHMTFASVTADHSANLASSKRIVSARIVMPIIGAIELRDLLTQLIDALTEQGVITSEAPLPTIVTPPGRPH
Ga0210401_111909261	3300020583	Soil	MEHDDDLAALPLVDDPAVKDVFAEFCTGLNFVHGNLHMTFASVTADYSSPQAPSKRIVSARIVMPIIGAIELRDLLTQLIDTLTEQGVIIPETSLSTIVTPPGRPH
Ga0210406_100405294	3300021168	Soil	MDTDRSALPLIDDVTVKDVFTDFCTGLNFVHGNLHMTFAAVTADHSIDDAPPRRIVSARIVMPITGAVELRDLLTQVLDALTAQGEIVPETPSPTVMTPPGGRPH
Ga0210400_104761161	3300021170	Soil	DDLTALPLVDDPTVKDVFAEFCTGLNFVHGNLHMTFASVTADHSANRASSKRIVSARIVMPIIGAIELRDLLTQLIDALTEQGVITSEAPLPTIVTPPGRPH
Ga0210400_106778181	3300021170	Soil	MEHDDDLAALPLVDDPAVKDVFAEFCTGLNFVHGNLHMTFASVTADYNSPQAPSKRIVSARIVMPIIGAIELRDLLTQLIDTLTEQGVI
Ga0210405_101507603	3300021171	Soil	MEHDDDLAALPLVDDPAVKDVFAEFCTGLNFVHGNLHMTFASVTADYNSPQAPSKRIVSARIVMPIIGAIELRDLLTQLIDTLTEQGVIIPETSLSTIVTPPGRPH
Ga0210408_108360861	3300021178	Soil	MERDDDLTALPLVDDPTVKDVFAEFRTGLNFVHGNLHMTFASVTADHSANRASSKRIVSARIVMPIIGAIELRDLLTQLIDALTEQGVITSEAPLPTIVTPPGRPH
Ga0210388_101428391	3300021181	Soil	KWVMERDDDLTALPLVDDPTVKDVFAEFCTGLNFVHGNLHMTFASVTADHSANRASSKRIVSARIVMPIIGAIELRDLLTQLIDALTEQGVITSEAPLPTIVTPPGRPH
Ga0210397_107683442	3300021403	Soil	LAALPLVDDPAVKDVFAEFCTGLNFVHGNLHMTFASVTADYNSPQAPSKRIVSARIVMPIIGAIELRDLLTQLIDTLTEQGVIIPETSLSTIVTPPGRPH
Ga0210387_112210351	3300021405	Soil	MEHDDDLAALPLVDDPAVKDVFAEFCTGLNFVHGNLHMTFASVTADYSSPQAPSKRIVSARIVMPIIGAIELRDLLTQLIDTLTEQGVI
Ga0210387_116791052	3300021405	Soil	LAALPLVDDPAVKDVFAEFCTGLNFVHGNLRMTFASVTADYNSPQAPSKRIVSARIVMPIIGAIELRDLLTQLIDTLTEQGVIIPETSLSTIVTPPGRPH
Ga0210386_110655291	3300021406	Soil	MERDHDLTALPLVDDPTVKDVFAEFCTGLNFVHGNLHMTFASVTADHSANRASSKRIVSARIVMPIIGAIELRDLLTQLIDALTEQGVITSEA
Ga0210383_116731751	3300021407	Soil	KGMEHDDDLAALPLVDDAAVKEVFAEFCTGLNFVHGNLHMTFASVTADYSSPQAPSKRMVSARIVMPIIGAIELRDLLTQLIDTLTEQGVIIRETPLSTIVTPPGRPH
Ga0210394_108753272	3300021420	Soil	MEHDDDLAALPLVDDPAVKDVFAEFCTGLNFVHGNLRMTFASVTADYNSPQAPSKRIVSARIVMPIIGAIELRDLLTQLIDTLTEQGVIIPETSLSTIVTPPGRPH
Ga0210384_101379842	3300021432	Soil	MEHDDDLAALPLVDDPAVKDVFAEFCTGLNFVHGNLHMTFASVTADYSSPQAPSKRIVSARIVMPIIGAIELRDLLTQLIDTLTEQGVIIPETPLSTIVTPPGRPH
Ga0210384_117584741	3300021432	Soil	MERDHDLTALPLVDDPTVKDVFAEFCTGLNFVHGNLHMTFASVTADHSANRASSKRIVSARIVMPIIGAIELRDLLTQLIDALTEQGVIISEAPLPTIVAPPGRPH
Ga0210391_108029092	3300021433	Soil	MERDDDLTALPLVDDPTVKDVFAEFCTGLNFVHGNLHMTFASVTADHSANRASSKRIVSARIVMPIIGAIELRDLLTQLIDALTEQGVIPASCDPQMW
Ga0210390_115136481	3300021474	Soil	MEHDDDLAALRLVDDAAVKEVFAEFCTGLNFVHGNLHMTFASVTADYSSPQAPSKRIVSARIVMPIIGAIELRDLLTQLIDTLTEQGVIIPETSLSTIVTPPGRPH
Ga0210398_109515432	3300021477	Soil	RNGPNIYGDITTHLDDVAKDKWVMERDDDLTALPLVDDPTVKDVFAEFRTGLNFVHGNLHMTFASVTADHSANRASSKRIVSARIVMPIIGAIELRDLLTQLIDALTEQGVITSEAPLPTIVTPPGRPH
Ga0210409_117269541	3300021559	Soil	MERDDDLTALPLVDDPTVKDVFAEFCTGLNFVHGNLHMTFASVTADHSANLASSKRIVSARIVMPIIGAIELRDLLTQLIDALTEQGVITSEAPLPTIVTSPERPH
Ga0126371_133104911	3300021560	Tropical Forest Soil	MTHDDDLAALRLVDDPTVRDVFAEFCTGLNFVHGNLHMTFASVTADHSTDSAPSKRIVSARIVMPIIGAIELRDLLTQLIDTLTEQGAI
Ga0242662_101598961	3300022533	Soil	DPTVKDVFAEFCTGLNFVHGNLHMTFASVTADHSANRASSKRIVSARNVMPIIGAIELRDLLTQLIDALTGQGVITSEAPLPTIVTPPGRPH
Ga0212123_107277801	3300022557	Iron-Sulfur Acid Spring	MEHDDDLAALPLVDDPAVKDVFAEFCTGLNFVHGNLHMTFASVTADYSSPQAPSKRIVSARIVMPIIGAIELRDLLTQLTDTLIEQGVIIPETPLSTIVTPPGRPH
Ga0242665_103658541	3300022724	Soil	TEPGNSAQASRQSARSSLTTLPTALAPTVKDVFAEFCTGLNFVHGNLHMTFASVTADHSANRASSKRIVSARIVMPIIGAIELRDLLTQLIDALTEQGVITSEAPLPTIVTPPGRPH
Ga0242654_101126651	3300022726	Soil	GPNIYGDITTHLDDVAKDKWVMERDDDLTALPLVDDPTVKDVFAEFCTGLNFVHGNLHMTFASVTADHSANRASSKRIVSARIVMPIIGAIELRDLLTQLIDALTEQGVITSEAPLPTIVTPPGRPH
Ga0207665_103218273	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	LTALPLVDDPTVKDVFAEFCTGLNFVHGNLHMTFASVTADHSANRASSKRIVSARIVMPIIGAIELRDLLTQLIDALTEQGVITSEAPLPTIVTPPGRPH
Ga0257162_10058993	3300026340	Soil	MTQAEDLTSLPLVDDVTVKDAFAEFCTGLHFVHGNLHMTFASVTADHSAQQTPSKRVVSARIVMPIIGAIELRDLLTQLISALTAQGVITPEPPLPTVTMPPGRPH
Ga0257160_10026452	3300026489	Soil	MTQAEDLTSLPLVDDVTVKDAFAEFCTGLHFVHGNLHMTFTSVTADHSAQQTPSKRVVSARIVMPIIGAIELRDLLTQLISALTAQGVITPEPPLPTVTMPPGRPH
Ga0257157_10258182	3300026496	Soil	MTQAEDLTSLPLVDDVTVKDAFAEFCTGLHFVHGNLHMTFASVTAEHSAQQTPSKRVVSARIVMPIIGAIELRDLLTQLISALTAQGVITPEPPLPTVTMPPGRPH
Ga0257161_10283231	3300026508	Soil	IYGDIAAHLDDFAKDKWVMERDDDLTALPLVDDPTVKDVFAEFCTGLNFVHGNLHMTFASVTADHSANRASSKRIVSARIVMPIIGAIELRDLLTQLIDALTEQGVITSEAPLPTIVTPPERPH
Ga0208097_10087422	3300027173	Forest Soil	MEHDDDLTALPLVDDPTVKDVFAEFCTGLNFVHGNLHMTFASVTADHSANRASSKRIVSARIVMPIIGAIELRDLLTQLIDALTEQGVITSEAPLPTIVMPPGRPH
Ga0209248_100164611	3300027729	Bog Forest Soil	MERADDLTALPIVDDGTVKDSFAEFCTGVNFVHGNLHMTFASVTADHSAHEAPSRRVVSARIVMPIIGAIELRDLLTHLIDALTEQ
Ga0209380_101009151	3300027889	Soil	NGPNIYGDITAHLDDVAKDKWVMEHDDDLTALPLVDDPTVKDVFAEFCTGLNFVHGNLHMTFASVTADHSANRASSKRIVSARIVMPIIGAIELRDLLTQLIDALTEQGVITSEAPLPTIVTPPGRPH
Ga0308309_103327813	3300028906	Soil	MEHDDDLTALPLVDDPTVKDVFAEFCTGLNFVHGNLHMTFASVTADHSANRASSKRIVSARIVMPIIGAIELRDLLTQLIDALTEQGVITSEAPLPTIVTPPGRPH
Ga0318541_101088501	3300031545	Soil	LTALPLIDDPTVKDVFVEFCTGLNFVHGNLHMTFASVTADHSAPQAASKRIVSARIVMPIIGAIELRDLLTQLIDALTEQGVIIPETPLPTLVMPPGRPH
Ga0318541_105969041	3300031545	Soil	MTLQRMKWVMGHDDDLTTLSLVNHPSVKDAFAEFCTGLNFVHGNVHMTFASVTADHGSPQAPSKRIVSARIVMPIIGAMELRDLLTQLIDALTAQG
Ga0318538_101000643	3300031546	Soil	MERDSDLMTLPLVDDPTVKDVFAEFCTGLNFVHGNLHMTFASVTADHSADRAPSKRIVSARIVMPIIGALELRDLPTRLIDALTQHGVIISEAPLPTIVTPPGRPH
Ga0318538_104302871	3300031546	Soil	MEPADDPAALPLVDDIDVKDVFGEFCTGLNFVHGNVHMTFASVTADYSSPRASSKRVVSARIVMPIIGAIELRDLLTQLIDALTAQGVIIPEPPLPTIVVPPGRPH
Ga0310915_110442621	3300031573	Soil	MERDDDLTALPLVDDPTVKDVFAEFCTGLNFVHGNLHMTFASVTADHSANRASSKRIVSARIVMPIIGAIELRDLLTQLIDALTEQGVISEASLPTIVMPPG
Ga0318542_101209341	3300031668	Soil	MERDDDLTALPLVDDPTVKDVFAEFCTGLNFVHGNLHMTFASVTADHSANRASSKRIVSARIVMPIIGAIELRDLLTQLIDALTEQGVISEASLPTIVMPPGPPH
Ga0310686_1002810851	3300031708	Soil	MEQDNDLMALPLVDDPTVKDVFAEFCTGLNFVHGNLHMTFASVTADYSSPQAPSKRIVSARIVMPIIGAIELRDLLTQLIDALTEQGVIIPETPLPTKVTPPPGRPH
Ga0310686_1108643953	3300031708	Soil	MEHDDDLAALLLIDDPTVKDVFPEFCTGLNFVHGNLHMTFASVTADYSSPEAPSKRVVSARIVMPIIGAIELRDLLTQLIEALAEQGVIIPETPMPTMVTPRRPH
Ga0306917_104414771	3300031719	Soil	MEPADDPSALPIVDDIKVKDTFAEFCTGLNFVHGNVHMTFASVTADHNSHQASSKRVISARIVMPVIGATELRDLLTQLIDALTAEGVIIPEAPLPTIVVPPGRPH
Ga0318500_107303182	3300031724	Soil	MTLQRMKWVMGHDDDLTTLSLVNHPSVKDAFAEFCTGLNFVHGNVHMTFASVTADHGSPQAPSKRIVSARIVMPIIGAIELRDLLTQLIDALTAQGVMIPETPVPT
Ga0318501_102511871	3300031736	Soil	PIVDDPTVKDVFAEFCTGLNFVHGNLHMTFASVTADHSANRASSKRIVSARIVMPIIGAIELRDLLTQLIDALTEQGVISEASLPTIVMPPGPPH
Ga0318492_102779422	3300031748	Soil	MERQSKRRPPERTASMTMQRTKCVMERDDDLTALSLANDPSVKDAFAEFCTGLNFVHGNVHMTFASVTADHGSPQAPSKRIVSARIVMPIIGAMELRDLLTQLIDALTAQGVIIPETPVPTIVTPQGRPH
Ga0318494_102579522	3300031751	Soil	MERQSKRRPPERTASMTMQRTKCVMERDDDLTALSLANDPSVKDAFAEFCTGLNFVHGNVHMTFASVTADHGSPQAPSKRIVSARIVMPIIGAIELRDLLTQLIDALTAQGVMIPETPVPTIVTPQGRAH
Ga0307477_108035781	3300031753	Hardwood Forest Soil	NHNITWLQTTSQTEVMPQYQSLDSRERGKLRLVDDPTVKDVFAEFCTGLNFVHGNLHMTFASVTADHSANRASSKRIVSARIVMPIIGAIELRDLLTQLIDALTEQGVITSEAPLPTIVTSPERPH
Ga0307475_109254482	3300031754	Hardwood Forest Soil	MERDDDLTALPLVDDPTVKDVFAEFCTGLNFVHGNLHMTFASVTADHSANRASSKRIVSARIVMPIIGAIELRDLLTQLIDTLTEQG
Ga0318521_102167131	3300031770	Soil	LRRTGDDAEDIWTMEPADDPAALPLVDDIDVKDVFGEFCTGLNFVHGNVHMTFASVTADYSSPRASSKRVVSARIVMPIIGAIELRDLLTQLIDALTAQGVIIPEPPLPTIVVPPGRPH
Ga0318521_108882682	3300031770	Soil	LDDVAKDKWVMERDDDLTALPLVDDPTVKDVFAEFCTGLNFVHGNLHMTFASVTADHSANRASSKRIVSARIVMPIIGAIELRDLLTQLIDALTEQGVISEASLPTIVMPPGPPH
Ga0318546_103785132	3300031771	Soil	LTALPLIDDPTVKDVFVEFCTGLNFVHGNLHMTFASVTADHGSPQAPSKRIVSARIVMPIIGAMELRDLLTQLIDALTAQGVIIPETPVPTIVTPQGRPH
Ga0318497_106262002	3300031805	Soil	DQWVMERDDDLTALPLVDDPTVKDVFAEFCTGLNFVHGNLHMTFASVTADHSANRASSKRIVSARIVMPIIGAIELRDLLTQLIDALTEQGVISEASLPTIVMPPGPPH
Ga0318567_101903731	3300031821	Soil	VTVKDVFADFCTRLNFVHGNLHMTFASVTADHSIDDAPPRRIVSARLVMPIIGAVELRDLLTQVIDALTAQGVIVPETPSPTVMTPPGGKPH
Ga0310917_102428281	3300031833	Soil	HDDLTALPLVDDPTVKDMFAEFCTGLNFVHGNLHMTFASVTADHSANRASSKRIVSARIVMPIIGAIELRDLLTQLIDALTEQGVISEASLPTIVMPPGPPH
Ga0318512_105365942	3300031846	Soil	MEPADDPAALPLVDDIDVKDVFGEFCTGLNFVHGNVHMTFASVTADYSSPRASSKRVVSARIVMPIIGAIELRDLLTQLIDALTAQGV
Ga0306919_114735381	3300031879	Soil	ANDPSVKDAFAEFCTGLNFVHGNVHMTFASVTADHGSPQAPSKRIVSARIVMPIIGAIELRDLLTQLIDALTAQGVIIPETPVPTIVTPQGRPH
Ga0306925_110958302	3300031890	Soil	MEHAEDFATLPLVDDEKVKDVFAEFCTGLNSVHGNVHMTFASVTADHSSPRASSKRIVSARIVMPIIGAIERRDLLTQLIDALTAQGVITRELPPTIVVPPGRPH
Ga0318520_110324171	3300031897	Soil	LTALSLANDPSVKDAFAEFCTGLNFVHGNVHMTFASVTADHGSPQAPSKRIVSARIVMPIIGAMELRDLLTQLIDALTAQGVIIPETPVPTIVTPQGRPH
Ga0306923_101582363	3300031910	Soil	MSLQRMKWVMGHDDDLTTLSLVNHPSVKDAFAEFCTGLNFVHGNVHMTFASVTADHGSPQAPSKRIVSARIVMPIIGAMELRDLLTQLIDALTAQGVIIPETPVPTIVTPQGRPH
Ga0306923_116533851	3300031910	Soil	MGDTDRSSALPLVEDGTVKDAFADFCTGLNFAHGNVHMTFASLTADHSRDDAPSKRVVSARIVMPITGAIELRDLLTELIDALTAQGVIVPELPSPTVVTPRGRPH
Ga0310912_100069848	3300031941	Soil	LTALPLIDDPTVKDVFVEFCTGLNFVHGNLHMTFASVTADHSAPQTASKRIVSARIVMPIIGAIELRDLLTQLIDALTEQGVIIPETPLPTLVMPPGRPH
Ga0310912_113061502	3300031941	Soil	LVDDPTVKDVFAEFCTGLNFVHGNLHMTFASVTADHSADRAPSKRIVSARIVMPIIGALELRDLPTRLIDALTQHGVIISEAPLPTIVTPPGRPH
Ga0310912_113216682	3300031941	Soil	MERQSKRRPPERTASMTMQRTKCVMERDDDLTALSLANDPSVKDAFAEFCTGLNFVHGNVHMTFASVTADHGSPQAPSKRIVSARIVMPIIGAMELRDLLTQLIDALTAQGVIIPET
Ga0310913_111133501	3300031945	Soil	MEPADDPAALPLVDDIDVKDVFGEFCTGLNFVHGNVHMTFASVTADYSSPRASSKRVVSARIVMPIIGAIERRDLLTQLIDALTAQGVITRELP
Ga0310910_100739132	3300031946	Soil	MERDDDLTALSLANDPSVKDAFAEFCTGLNFVHGNVHMTFASVTADHGSPQAPSKRIVSARIVMPIIGAMELRDLLTQLIDALTAQGVIIPETPVPTIVTPQGRPH
Ga0310910_102492021	3300031946	Soil	MEHDDDLSKFPLINDPTVKDVFAECCAGVNFVHGNLHMTFAAITADHSSSQAPSKRVVSARIVMPIIGVIELSDTLTHLIDALTEQGVILPEAPLLVPPGRPR
Ga0310909_101466063	3300031947	Soil	MEHDDLTALPLVDDPTVKDMFAEFCTGLNFVHGNLHMTFASVTADHSADRAPSKRIVSARIVMPIIGALELRDLPTRLIDALTQHGVIISEAPLPTIVTPPGRPH
Ga0306926_101545562	3300031954	Soil	MTLQRMKWVMGHDDDLTTLSLVNHPSVKDAFAEFCTGLNFVHGNVHMTFASVTADHGSPQAPSKRIVSARIVMPIIGAMELRDLLTQLIDALTAQGVIIPETPVPTIVTPQGRPH
Ga0306922_122574501	3300032001	Soil	DPTVKDVFAEFCTGLNFVHGNLHMTFASVTADHSADRAPSKRIVSARIVMPIIGALELRDLPTRLIDALTQHGVIISEAPLPTIVTPPGRPH
Ga0318549_102649072	3300032041	Soil	DITARVDVDPKDKQVMEHDDLTALPLVDDPTVKDMFAEFCTGLNFVHGNLHMTFASVTADHSANRASSKRIVSARIVMPIIGAIELRDLLTQLIDALTEQGVISEASLPTIVMPPGPPH
Ga0318533_108033571	3300032059	Soil	ITAHLDDVAKDKWVMERDDDLTALPLVDDPTVKDVFAEFCTGLNFVHGNLHMTFASVTADHSANRASSKRIVSARIVMPIIGAIELRDLLTQLIDALTEQGVISEASLPTIVMPPGPPH
Ga0318533_108195951	3300032059	Soil	SLVNHPSVKDAIAEFCTGLNFVHGNVHMTFASVTADHGSPQAPSKRIVSARIVMPIIGAIELRDLLTQLIDALTAQGVMIPETPVPTIVTPQGRAH
Ga0306924_101822591	3300032076	Soil	DVAKDKWVMERDDDLTALPLVDDPTVKDVFAEFCTGLNFVHGNLHMTFASVTADHSANRASSKRIVSARIVMPIIGAIELRDLLTQLIDALTEQGVISEASLPTIVMPPGPPH
Ga0306924_103504293	3300032076	Soil	DLTTLSLVNHPSVKDAFAEFCTGLNFVHGNVHMTFASVTADHGSPQAPSKRIVSARIVMPIIGAMELRDLLTQLIDALTAQGVIIPETPVPTIVTPQGRPH
Ga0306924_120710602	3300032076	Soil	YDLSKFPLINDPTVKDVFAECCAGVNFVHGNLHMTFAAITADHSSSQAPSKRVVSARIVMPIIGVIELSDTLTHLIDALTEQGVILPEAPLLVPPGRPR
Ga0306920_1000657457	3300032261	Soil	MEPVEDLAKLPIVDDGKVKDVFAEFCTGLNSIHGNVHMTFASVTADHSSPRASSKRVVSARLVMPIIGAIELRDLLTQLIDALTAQGVITTEPPSPTVVVPRSRPH
Ga0306920_1001785782	3300032261	Soil	MEHDDDLSKFPLINDPTVKDVFAECCAGVNFVQGNLHMTFAAITADHSSSQAPSKRVVSARIVMPIIGVIELSDTLTHLIDALTEQGVILPEAPLLVPPGRPR
Ga0306920_1033089631	3300032261	Soil	MLVGHTDRSSTLPLADDGTVKDSFADFCTGLNFAHGNVHMTFASLTADHSRDDAPSKRVVSARIVMPITGAIELRDLLTEIINALTAQGVIIPELPSPTIITPPGRPH
Ga0306920_1033563421	3300032261	Soil	MQRINGSWKHDDLTALPLVDDPTVKDVFAEFCTGLNFVHGNLHMTFASVTADHSADRAPSKRIVSARIVMPIIGALELRDLPTRLIDALTQQGLIISEAPLLTPPGRPIECYQ

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F059410

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences