Metagenome / Metatranscriptome Family F059312

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F059312
Family Type	Metagenome / Metatranscriptome
Number of Sequences	134
Average Sequence Length	84 residues
Representative Sequence	MDLLAISVSLAALILGAAIGWLLARSRFTRTIAELNTNLVLERRVNKQLSEAVQIDAVRSLVQAPGLTTDELTREPTALSG
Number of Associated Samples	120
Number of Associated Scaffolds	134

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	67.16 %
% of genes near scaffold ends (potentially truncated)	31.34 %
% of genes from short scaffolds (< 2000 bps)	82.09 %
Associated GOLD sequencing projects	109
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.35

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (71.642 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (17.164 % of family members)
Environment Ontology (ENVO)	Unclassified (26.119 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (48.507 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 56.88% β-sheet: 0.00% Coil/Unstructured: 43.12%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.35
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.35
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 134 Family Scaffolds
PF13458	Peripla_BP_6	47.01
PF03781	FGE-sulfatase	4.48
PF07992	Pyr_redox_2	2.99
PF02627	CMD	1.49
PF04964	Flp_Fap	1.49
PF03401	TctC	0.75
PF07690	MFS_1	0.75
PF13519	VWA_2	0.75
PF13561	adh_short_C2	0.75
PF01717	Meth_synt_2	0.75
PF03734	YkuD	0.75
PF10282	Lactonase	0.75
PF09130	DUF1932	0.75

COG ID	Name	Functional Category	% Frequency in 134 Family Scaffolds
COG1262	Formylglycine-generating enzyme, required for sulfatase activity, contains SUMF1/FGE domain	Posttranslational modification, protein turnover, chaperones [O]	4.48
COG0599	Uncharacterized conserved protein YurZ, alkylhydroperoxidase/carboxymuconolactone decarboxylase family	General function prediction only [R]	1.49
COG2128	Alkylhydroperoxidase family enzyme, contains CxxC motif	Inorganic ion transport and metabolism [P]	1.49
COG3847	Flp pilus assembly protein, pilin Flp	Extracellular structures [W]	1.49
COG0620	Methionine synthase II (cobalamin-independent)	Amino acid transport and metabolism [E]	0.75
COG1376	Lipoprotein-anchoring transpeptidase ErfK/SrfK	Cell wall/membrane/envelope biogenesis [M]	0.75
COG2084	3-hydroxyisobutyrate dehydrogenase or related beta-hydroxyacid dehydrogenase	Lipid transport and metabolism [I]	0.75
COG3034	Murein L,D-transpeptidase YafK	Cell wall/membrane/envelope biogenesis [M]	0.75
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	0.75

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	71.64 %
Unclassified	root	N/A	28.36 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	71.64 %
Unclassified	root	N/A	28.36 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	71.64 %
Unclassified	root	N/A	28.36 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	58.96 %
Unclassified	root	N/A	28.36 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.75 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.75 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	30.60 %
Unclassified	root	N/A	28.36 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.75 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.75 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.36 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	11.94 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	2.99 %
Candidatus Doudnabacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Doudnabacteria	0.75 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.75 %
Gammaproteobacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis	0.75 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.36 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	4.48 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.99 %
Beijerinckiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae	1.49 %
Candidatus Doudnabacteria bacterium RIFCSPHIGHO2_01_FULL_46_14	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Doudnabacteria → Candidatus Doudnabacteria bacterium RIFCSPHIGHO2_01_FULL_46_14	0.75 %
Sedimenticola	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → Sedimenticola	0.75 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.75 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.36 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.99 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.99 %
Rhodoblastus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Rhodoblastus	1.49 %
Sedimenticola selenatireducens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → Sedimenticola → Sedimenticola selenatireducens	0.75 %
Candidatus Doudnabacteria bacterium RIFCSPHIGHO2_01_FULL_46_14	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Doudnabacteria → Candidatus Doudnabacteria bacterium RIFCSPHIGHO2_01_FULL_46_14	0.75 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.75 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.36 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.99 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.99 %
Rhodoblastus acidophilus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Rhodoblastus → Rhodoblastus acidophilus	1.49 %
Sedimenticola selenatireducens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → Sedimenticola → Sedimenticola selenatireducens	0.75 %
Candidatus Doudnabacteria bacterium RIFCSPHIGHO2_01_FULL_46_14	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Doudnabacteria → Candidatus Doudnabacteria bacterium RIFCSPHIGHO2_01_FULL_46_14	0.75 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.75 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.75 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001867\|JGI12627J18819_10239820	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	729	Open in IMG/M
3300004152\|Ga0062386_100224586	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1482	Open in IMG/M
3300004633\|Ga0066395_10053733	All Organisms → cellular organisms → Bacteria	1794	Open in IMG/M
3300005177\|Ga0066690_10272521	All Organisms → cellular organisms → Bacteria → Proteobacteria	1139	Open in IMG/M
3300005332\|Ga0066388_100065572	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3896	Open in IMG/M
3300005332\|Ga0066388_100116199	All Organisms → cellular organisms → Bacteria → Proteobacteria	3185	Open in IMG/M
3300005332\|Ga0066388_100358728	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2104	Open in IMG/M
3300005332\|Ga0066388_102018791	All Organisms → cellular organisms → Bacteria	1034	Open in IMG/M
3300005332\|Ga0066388_106859173	All Organisms → cellular organisms → Bacteria	573	Open in IMG/M
3300005363\|Ga0008090_15102949	Not Available	1135	Open in IMG/M
3300005363\|Ga0008090_15874379	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3785	Open in IMG/M
3300005436\|Ga0070713_100055272	All Organisms → cellular organisms → Bacteria → Proteobacteria	3298	Open in IMG/M
3300005436\|Ga0070713_100721199	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	953	Open in IMG/M
3300005439\|Ga0070711_100499282	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1003	Open in IMG/M
3300005450\|Ga0066682_10954553	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → Sedimenticola → Sedimenticola selenatireducens	508	Open in IMG/M
3300005587\|Ga0066654_10336549	All Organisms → cellular organisms → Bacteria	818	Open in IMG/M
3300005610\|Ga0070763_10256920	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	949	Open in IMG/M
3300005764\|Ga0066903_100517908	Not Available	2029	Open in IMG/M
3300005764\|Ga0066903_101534544	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1259	Open in IMG/M
3300006028\|Ga0070717_10407804	Not Available	1221	Open in IMG/M
3300006032\|Ga0066696_10421952	All Organisms → cellular organisms → Bacteria	872	Open in IMG/M
3300006041\|Ga0075023_100364885	Not Available	615	Open in IMG/M
3300006050\|Ga0075028_100364667	All Organisms → cellular organisms → Bacteria	819	Open in IMG/M
3300006052\|Ga0075029_100328165	All Organisms → cellular organisms → Bacteria	982	Open in IMG/M
3300006057\|Ga0075026_100362091	All Organisms → cellular organisms → Bacteria	807	Open in IMG/M
3300006086\|Ga0075019_10150531	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1360	Open in IMG/M
3300006162\|Ga0075030_100987667	Not Available	663	Open in IMG/M
3300006172\|Ga0075018_10117903	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1195	Open in IMG/M
3300006175\|Ga0070712_100036956	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3326	Open in IMG/M
3300006755\|Ga0079222_10499618	All Organisms → cellular organisms → Bacteria	890	Open in IMG/M
3300006800\|Ga0066660_11463739	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Rhodoblastus → Rhodoblastus acidophilus	537	Open in IMG/M
3300006804\|Ga0079221_10043002	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1987	Open in IMG/M
3300006806\|Ga0079220_10008610	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3853	Open in IMG/M
3300006893\|Ga0073928_10095760	All Organisms → cellular organisms → Bacteria → Proteobacteria	2502	Open in IMG/M
3300006954\|Ga0079219_10116687	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1350	Open in IMG/M
3300009038\|Ga0099829_10127233	All Organisms → cellular organisms → Bacteria → Proteobacteria	2012	Open in IMG/M
3300009090\|Ga0099827_10627782	Not Available	927	Open in IMG/M
3300009792\|Ga0126374_10054200	Not Available	2054	Open in IMG/M
3300010046\|Ga0126384_10381638	All Organisms → cellular organisms → Bacteria → Proteobacteria	1184	Open in IMG/M
3300010048\|Ga0126373_11134772	All Organisms → cellular organisms → Bacteria → Proteobacteria	848	Open in IMG/M
3300010358\|Ga0126370_10019858	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3842	Open in IMG/M
3300010359\|Ga0126376_12024569	All Organisms → cellular organisms → Bacteria → Proteobacteria	618	Open in IMG/M
3300010361\|Ga0126378_10648134	Not Available	1169	Open in IMG/M
3300010362\|Ga0126377_11118647	All Organisms → cellular organisms → Bacteria → Proteobacteria	857	Open in IMG/M
3300010398\|Ga0126383_10592532	All Organisms → cellular organisms → Bacteria → Proteobacteria	1179	Open in IMG/M
3300011271\|Ga0137393_11546598	Not Available	553	Open in IMG/M
3300012083\|Ga0154000_1104775	Not Available	586	Open in IMG/M
3300012181\|Ga0153922_1095655	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	674	Open in IMG/M
3300012198\|Ga0137364_10078794	All Organisms → cellular organisms → Bacteria → Proteobacteria	2273	Open in IMG/M
3300012199\|Ga0137383_10798351	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	689	Open in IMG/M
3300012200\|Ga0137382_10133590	All Organisms → cellular organisms → Bacteria → Proteobacteria	1669	Open in IMG/M
3300012201\|Ga0137365_10353565	All Organisms → cellular organisms → Bacteria → Proteobacteria	1086	Open in IMG/M
3300012202\|Ga0137363_11362713	Not Available	599	Open in IMG/M
3300012206\|Ga0137380_10507131	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1062	Open in IMG/M
3300012206\|Ga0137380_10673795	Not Available	900	Open in IMG/M
3300012207\|Ga0137381_10353221	All Organisms → cellular organisms → Bacteria → Proteobacteria	1282	Open in IMG/M
3300012207\|Ga0137381_10850303	Not Available	790	Open in IMG/M
3300012209\|Ga0137379_10248058	All Organisms → cellular organisms → Bacteria → Proteobacteria	1694	Open in IMG/M
3300012209\|Ga0137379_10633227	Not Available	976	Open in IMG/M
3300012211\|Ga0137377_10466548	All Organisms → cellular organisms → Bacteria → Proteobacteria	1201	Open in IMG/M
3300012211\|Ga0137377_10534723	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1110	Open in IMG/M
3300012349\|Ga0137387_10661034	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	757	Open in IMG/M
3300012351\|Ga0137386_10391228	All Organisms → cellular organisms → Bacteria → Proteobacteria	1001	Open in IMG/M
3300012356\|Ga0137371_10376193	Not Available	1102	Open in IMG/M
3300012356\|Ga0137371_10416193	All Organisms → cellular organisms → Bacteria → Proteobacteria	1042	Open in IMG/M
3300012361\|Ga0137360_10883064	Not Available	770	Open in IMG/M
3300012362\|Ga0137361_10427216	Not Available	1217	Open in IMG/M
3300016319\|Ga0182033_10734508	Not Available	866	Open in IMG/M
3300016341\|Ga0182035_10429504	Not Available	1116	Open in IMG/M
3300016357\|Ga0182032_10088758	All Organisms → cellular organisms → Bacteria	2147	Open in IMG/M
3300016371\|Ga0182034_10401993	Not Available	1124	Open in IMG/M
3300017822\|Ga0187802_10000493	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	9660	Open in IMG/M
3300017928\|Ga0187806_1029807	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Doudnabacteria → Candidatus Doudnabacteria bacterium RIFCSPHIGHO2_01_FULL_46_14	1612	Open in IMG/M
3300017959\|Ga0187779_10114994	All Organisms → cellular organisms → Bacteria → Proteobacteria	1633	Open in IMG/M
3300017966\|Ga0187776_10797055	All Organisms → cellular organisms → Bacteria → Proteobacteria	677	Open in IMG/M
3300017973\|Ga0187780_10240728	All Organisms → cellular organisms → Bacteria → Proteobacteria	1266	Open in IMG/M
3300017993\|Ga0187823_10122519	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	798	Open in IMG/M
3300017994\|Ga0187822_10000686	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	6486	Open in IMG/M
3300018058\|Ga0187766_10173584	All Organisms → cellular organisms → Bacteria	1350	Open in IMG/M
3300018060\|Ga0187765_11289578	Not Available	517	Open in IMG/M
3300018089\|Ga0187774_10447448	All Organisms → cellular organisms → Bacteria → Proteobacteria	799	Open in IMG/M
3300018433\|Ga0066667_10482645	All Organisms → cellular organisms → Bacteria	1018	Open in IMG/M
3300018482\|Ga0066669_10177768	All Organisms → cellular organisms → Bacteria → Proteobacteria	1601	Open in IMG/M
3300019887\|Ga0193729_1251810	Not Available	559	Open in IMG/M
3300020150\|Ga0187768_1054124	All Organisms → cellular organisms → Bacteria → Proteobacteria	893	Open in IMG/M
3300021168\|Ga0210406_10992665	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	625	Open in IMG/M
3300021432\|Ga0210384_10423931	Not Available	1199	Open in IMG/M
3300021560\|Ga0126371_10085371	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3108	Open in IMG/M
3300021560\|Ga0126371_10462767	Not Available	1415	Open in IMG/M
3300021560\|Ga0126371_11013423	All Organisms → cellular organisms → Bacteria	972	Open in IMG/M
3300022557\|Ga0212123_10017684	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	8509	Open in IMG/M
3300025915\|Ga0207693_10079075	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2573	Open in IMG/M
3300025928\|Ga0207700_11883926	Not Available	524	Open in IMG/M
3300026550\|Ga0209474_10428544	All Organisms → cellular organisms → Bacteria → Proteobacteria	678	Open in IMG/M
3300026552\|Ga0209577_10859110	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	508	Open in IMG/M
3300026979\|Ga0207817_1034594	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Rhodoblastus → Rhodoblastus acidophilus	535	Open in IMG/M
3300027024\|Ga0207819_1045580	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	528	Open in IMG/M
3300027039\|Ga0207855_1019781	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	920	Open in IMG/M
3300027050\|Ga0209325_1009979	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1056	Open in IMG/M
3300027680\|Ga0207826_1055887	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1091	Open in IMG/M
3300027725\|Ga0209178_1072452	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1124	Open in IMG/M
3300027775\|Ga0209177_10035431	Not Available	1337	Open in IMG/M
3300027824\|Ga0209040_10166171	All Organisms → cellular organisms → Bacteria → Proteobacteria	1177	Open in IMG/M
3300027846\|Ga0209180_10454951	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	721	Open in IMG/M
3300027874\|Ga0209465_10390556	All Organisms → cellular organisms → Bacteria → Proteobacteria	697	Open in IMG/M
3300027910\|Ga0209583_10072880	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1265	Open in IMG/M
3300027911\|Ga0209698_10391623	All Organisms → cellular organisms → Bacteria → Proteobacteria	1087	Open in IMG/M
3300028047\|Ga0209526_10173681	Not Available	1502	Open in IMG/M
3300028906\|Ga0308309_10533865	All Organisms → cellular organisms → Bacteria → Proteobacteria	1016	Open in IMG/M
3300029636\|Ga0222749_10382708	All Organisms → cellular organisms → Bacteria → Proteobacteria	743	Open in IMG/M
3300030847\|Ga0075405_11689741	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	525	Open in IMG/M
3300030916\|Ga0075386_12074508	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1076	Open in IMG/M
3300030969\|Ga0075394_11923704	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	823	Open in IMG/M
3300031231\|Ga0170824_125002446	Not Available	953	Open in IMG/M
3300031545\|Ga0318541_10068940	All Organisms → cellular organisms → Bacteria	1851	Open in IMG/M
3300031573\|Ga0310915_10063095	All Organisms → cellular organisms → Bacteria → Proteobacteria	2422	Open in IMG/M
3300031719\|Ga0306917_10385427	Not Available	1093	Open in IMG/M
3300031724\|Ga0318500_10070451	Not Available	1535	Open in IMG/M
3300031736\|Ga0318501_10640165	Not Available	585	Open in IMG/M
3300031747\|Ga0318502_10461705	All Organisms → cellular organisms → Bacteria → Proteobacteria	759	Open in IMG/M
3300031764\|Ga0318535_10352570	All Organisms → cellular organisms → Bacteria → Proteobacteria	658	Open in IMG/M
3300031782\|Ga0318552_10651199	All Organisms → cellular organisms → Bacteria → Proteobacteria	537	Open in IMG/M
3300031793\|Ga0318548_10430486	All Organisms → cellular organisms → Bacteria → Proteobacteria	646	Open in IMG/M
3300031797\|Ga0318550_10543974	Not Available	559	Open in IMG/M
3300031912\|Ga0306921_10180654	All Organisms → cellular organisms → Bacteria	2473	Open in IMG/M
3300031941\|Ga0310912_10319867	All Organisms → cellular organisms → Bacteria → Proteobacteria	1202	Open in IMG/M
3300031942\|Ga0310916_10350734	Not Available	1253	Open in IMG/M
3300031947\|Ga0310909_10499344	Not Available	1020	Open in IMG/M
3300031954\|Ga0306926_11201646	Not Available	891	Open in IMG/M
3300031981\|Ga0318531_10075365	All Organisms → cellular organisms → Bacteria → Proteobacteria	1464	Open in IMG/M
3300032035\|Ga0310911_10045420	Not Available	2266	Open in IMG/M
3300032064\|Ga0318510_10101706	Not Available	1094	Open in IMG/M
3300032892\|Ga0335081_10042841	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	7171	Open in IMG/M
3300033290\|Ga0318519_10052552	Not Available	2042	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.51%
Host-Associated	Host-Associated	1.49%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	85.82%
Aquatic	Environmental → Aquatic	12.69%
Fungi	Host-Associated → Fungi	1.49%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	85.82%
Sediment	Environmental → Aquatic → Sediment	6.72%
Freshwater	Environmental → Aquatic → Freshwater	4.48%
Thermal Springs	Environmental → Aquatic → Thermal Springs	1.49%
Mycelium	Host-Associated → Fungi → Mycelium	1.49%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	61.19%
Loam	Environmental → Terrestrial → Soil → Loam	18.66%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	6.72%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	5.97%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	4.48%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	1.49%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified	1.49%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	26.12%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	22.39%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	13.43%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	6.72%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	6.72%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	5.97%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.22%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	4.48%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	2.99%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	1.49%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	1.49%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	1.49%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified	1.49%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	17.16%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	16.42%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	9.70%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	8.21%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	6.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.22%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.22%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	5.22%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.22%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	4.48%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	2.99%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.24%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.49%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	1.49%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.49%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.49%
Attine Ant Fungus Gardens	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens	1.49%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	1.49%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.75%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.75%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.75%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005587	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006041	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006057	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2012	Environmental	Open in IMG/M
3300006086	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012083	Attine ant fungus gardens microbial communities from North Carolina, USA - TSNC084 MetaG	Host-Associated	Open in IMG/M
3300012181	Attine ant fungus gardens microbial communities from New Jersey, USA - TSNJ006 MetaG	Host-Associated	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017928	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_1	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300017993	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_3	Environmental	Open in IMG/M
3300017994	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_2	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300018089	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_20_MG	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019887	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c2	Environmental	Open in IMG/M
3300020150	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP10_20_MG	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300026979	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 13 (SPAdes)	Environmental	Open in IMG/M
3300027024	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 42 (SPAdes)	Environmental	Open in IMG/M
3300027039	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 14 (SPAdes)	Environmental	Open in IMG/M
3300027050	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM1H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027680	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 80 (SPAdes)	Environmental	Open in IMG/M
3300027725	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200 (SPAdes)	Environmental	Open in IMG/M
3300027775	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control (SPAdes)	Environmental	Open in IMG/M
3300027824	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027910	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014 (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030847	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA10 SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030916	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA12 EcM (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030969	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA12 Emin (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12627J18819_102398201	3300001867	Forest Soil	MSQIGTMDRYMDLLAIGGSMAALVLGAAIGWLLARSRFTRTIAELNTSLVLERRVNKQLSEAIQFDAVPSWSQAPGPTMSDESM
Ga0062386_1002245863	3300004152	Bog Forest Soil	MDLLAISVSLAALILGAAIGWLLARSRFTTTIAELNTNLVLERRVNKQLSEAVQIDAVRSLIQAPGLTTSDEPMREPTASAG*
Ga0066395_100537332	3300004633	Tropical Forest Soil	MSQVYSMDRYMDLLAISGSLAALILGAAIGWFFARSRFTGTIAELNTKLVLERRVNKQLSEAAQIDAMRSLMQAPSLTTPSDELMREPTVLSG*
Ga0066690_102725212	3300005177	Soil	MDLLAIGASLVALIFGAAIGWLLARSRFTRTIAELNTNLILERRVNKQLCESVEFDAVPNLIRAPDLTISSEPTRESMVPSG*
Ga0066388_1000655724	3300005332	Tropical Forest Soil	MDLLTIGGSVAALVLGAAIGWLFARSRFTRTIAELNTSLVLERRVNKQLSEAVQFDAVPSWSQAPDPTMSDEPVREPTVLSG*
Ga0066388_1001161992	3300005332	Tropical Forest Soil	MSQAYSMDRYMDLLAISSSLAALIFGAAIGWLFARSRFTRTIAELNTKLVLERRVNKLSEAAQIDAVRSLMQAPGLAMPDEPAREPTALSG*
Ga0066388_1003587282	3300005332	Tropical Forest Soil	MDLLAIGVSLAALTLGAAIGWFIARSRFTRKIAELNTNLILERRVNRQLSEAVQIDAVRSFMQAPGLTMPDEPAPEPTVLSG*
Ga0066388_1020187912	3300005332	Tropical Forest Soil	MDLLAISGSLAALILGAAIGWFLARSRFTRTIAELNTKLVLERRVNKQLSEAAQIDAMRSLMQAPSLTTPSDELLREPTALSG*
Ga0066388_1068591732	3300005332	Tropical Forest Soil	MDLLAGYIDLVSISMSLVALVLGAAIGWLIARSRFRTTIAELNTKLVLERRVNKQLYEKAQIDAVSGLMHADVMRSATGEPARQPMAVSG*
Ga0008090_151029493	3300005363	Tropical Rainforest Soil	MSQIYSLGRYMDLLAISVSSAALILGAAIGWLFARSRFTRTIAELNTNLVLERRVNKQLSEAVQIDAVRSLLQAPSLTMPDERAHEPTVLSG*
Ga0008090_158743795	3300005363	Tropical Rainforest Soil	MDLLAGYMDLLSISMSLVALVLGAAIGWLIARSRFRTTIAELNTKLILERRVNKQLYEKAQIDAVAGLMGASNLTTSGEPARQPMAVSG*
Ga0070713_1000552722	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MSQIGTMDRYMDLLAIGGSMAALVLGAAIGWLLSRSRFTRTIAELNTSLVLERRVNKQLSEAIQFDAVPSWSQAPGPTMSDESMHEPTALSG*
Ga0070713_1007211992	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MSQILSVERGMDLLTIGASLAALIFGAAIGWLLARSRFTRTVAELNTNLILERRVNRQLSESVQFDAVPRLTREPDLTISGEPTRETLVPSA*
Ga0070711_1004992822	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MSQLCSIDRYMDLLAIGGGLAALILGAAIGWLFARSRFTRTIAELNTGLVLERRVNKQLSEAVQFDAAPSWSQAPAPTMSDEPVREPTVLSG*
Ga0066682_109545531	3300005450	Soil	MSQILSVERGMDLLTIGASLAALIFGAAIGWLLARSRFTRTVAELNTNLILERRVNKQLCESVQFDAVPRLTREPDLTISGEPTRGTLVPSA*
Ga0066654_103365492	3300005587	Soil	MDLLTIGASSAALIFGAAIGWLLARSRFTRTVAELNTNLILERRVNKQLSESVQFDAVPRLAREPDLTIPVEPTRETLVPKA*
Ga0070763_102569202	3300005610	Soil	MDVLAIGASLVALIFGAAIGWLLARSRFTTAIAELNTNLILERRVNKQLSETVQVQVDAVPRLIQTPNLTPSGEPTREPTVLSG*
Ga0066903_1005179082	3300005764	Tropical Forest Soil	MSQVYSMDRYMDLLAISGSLAALILGAAIGWFLARSRFTRTIAELNTKLVLERRVNKQLSEAAQIDAMRSLMQAPSLTTPSDELLREPTALSG*
Ga0066903_1015345442	3300005764	Tropical Forest Soil	MDLLAGYVDLVSISMSLVALALGVAIGWFIARSRFRTTIAELNTKLVLERRVNKQLYERAQIDAVQGLMHADVMRSAAGEPARQPMAVSG*
Ga0070717_104078043	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MDLLTIGASLAALIFGAAIGWLLARSRFTRTVAELNTNLILERRVNRQLSESVQFDAMPRLAREPDLTISGEPTRETLVPSA*
Ga0066696_104219522	3300006032	Soil	MDLLTIGASSAALIFGAAIGWLLARSRFTRTVAELNTNLILERRVNKQLSESVQFDAVPRLAREPDLTIPVEPTRETLVPTA*
Ga0075023_1003648851	3300006041	Watersheds	MDLLTIGASSAALIFGAAIGWLLARSRFTRTVAELNTNLILERRVNRQLSESVQFDAVPRLTRDPDLTISGEPTRETLVPSA*
Ga0075028_1003646672	3300006050	Watersheds	MDLLTIGASSAALIFGAAIGWLLARSRFTRTVAELNTNLILERRVNRQLSESVQLDAAPRLTREPDLTISGEPTRETLVPSA*
Ga0075029_1003281652	3300006052	Watersheds	MDLLAISVSMAALILGAAIGWFLARSRFITTIAELNTNLVLERRVNKQLSESVQIDAVRSLMQAPGLTTSDEPMREPTASSG*
Ga0075026_1003620911	3300006057	Watersheds	MDLLTIGASLAALIFGAAIGWLLARSRFTRTVAELNTNLILERRVNRQLSESVQFDAVPRLTREPDLTISGEPTRETLVPSA*
Ga0075019_101505313	3300006086	Watersheds	MDLLAISVSVAALILGAAIGWFLARSRFITTIAELNTNLVLERRVNKQLSESVQIDAVRSLMQAPGLTTSDEPMREPTASSG*
Ga0075030_1009876671	3300006162	Watersheds	MDLLAISVSLAALILGAAIGWLLARSRFTTTIAELNTNLVLERRVNKQLSESVQIDAVRSLMQAPGLTTSDEPMREPTASAG*
Ga0075018_101179031	3300006172	Watersheds	MDLLTIGASSAALIFGAAIGWLLARSRFTRTVAELNTNLILERRVNRQLSESVQFDAVPRLTRDPDLTISGEPTRET
Ga0070712_1000369563	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MSQLCSIDRYMDLLAIGGGLAALILGAAIGWLFARSRFTRTIAELNTSLVLERRVNKQLSEAVQFDAAPSWSQAPAPTMSDEPVREPTVLSG*
Ga0079222_104996182	3300006755	Agricultural Soil	SGTALDPMSQIGTMDRYMDLLAIGGSMAALVLGAAIGWLLARSRFTRTIAELNTSLVLERRVNKQLSEAIQFDAVPSWSQAPGPTMSDEPMHEPTALSG*
Ga0066660_114637391	3300006800	Soil	MSQILSVERGMDLLAIGASLAALIFGAASGWLLARSRFTRTVAELNTNLILERRVNKQLSDSVQFDGVPRLAREPDLTIPAKPTRETLVPTA*
Ga0079221_100430022	3300006804	Agricultural Soil	MSQIGTMDRYMDLLAIGGSMAALVLGAAIGWLLARSRFTRTIAELNTSLVLERRVNKQLSEAIQFDAVPSWSQAPGPTMSDESMHEPTALSG*
Ga0079220_100086103	3300006806	Agricultural Soil	MSQIGTMDRYMDLLAIGGSMAALVLGAAIGWLLARSRFTRTIAELNTSLVLERRVNKQLSEAIQFDAVPSWSQAPGPTMSDEPMHEPTALSG*
Ga0073928_100957603	3300006893	Iron-Sulfur Acid Spring	MDLLTIGASSAALIFGAAIGWLLARSRFTRTVAELNTNLILERRVNRQLCESVQFDAVPRLAREPDLTISGEPARETLVPSA*
Ga0079219_101166872	3300006954	Agricultural Soil	GAAIGWLLARSRFTRTIAELNTSLVLERRVNKQLSEAIQFDAVPSWSQAPGPTMSDESMHEPTALSG*
Ga0099829_101272333	3300009038	Vadose Zone Soil	MGRDMDLLAIGASLVALIFGAAIGWLLARSRFTRTIAELNTNLILERRVNKQLCESVQFDAVPSLIRAPDLTTLGEPTRESMVPSG*
Ga0099827_106277821	3300009090	Vadose Zone Soil	MSMGRDMDLLAIGASLVALIFGAAIGWLIARSRFTRTIAELNTNLILERRVNKQLCESVQFDAVPSLIRAPDLTTLGEPTRESMVPSG*
Ga0126374_100542003	3300009792	Tropical Forest Soil	MDLLAISGSLAALILGAAIGWFFARSRFTGTIAELNTKLVLERRVNKQLSEAAQIDAMRSLMQAPSLTTPSDELMREPTVLSG*
Ga0126384_103816382	3300010046	Tropical Forest Soil	MDLLAISGSLAALILGAAIGWFFARSRFTGTIAELNTKLVLERRVNKQLNEAAQIDAMRSLMQAPSLTTPSDELMREPTVLSG*
Ga0126373_111347722	3300010048	Tropical Forest Soil	MDLLAISSSLAALIFGAAIGWLFARSRFTRTIAELNTKLVLERRVNKQLSEAAQIDAVRSLMQAPGLAMPDEPAREPTALSG*
Ga0126370_100198585	3300010358	Tropical Forest Soil	MDRFMDLLAIGVSLAALTLGAAIGWFIARSRFTRKIAELNTNLILERRVNRQLSEAVQIDAVRSFMQPPGLTMPDEPAPEPTVLSG*
Ga0126376_120245691	3300010359	Tropical Forest Soil	MDLLAISGSLAALILGAAIGWFLARSRFTRTIAELNTKLVLERRVNKQLSEAAQIDAMRSLMQAPSLTTPSDELMREPTVLSG*
Ga0126378_106481341	3300010361	Tropical Forest Soil	LAALILGAAIGWFLARSRFTRTIAELNTKLVLERRVNKQLSEAAQIDAMRSLMQAPSLTTPSDELLREPTALSG*
Ga0126377_111186471	3300010362	Tropical Forest Soil	MDLLAISGSLAALILGAAIGWFLARSRFTRTIAELNTKLVLERRVNKQLSEAAQIDAMRSLMQAPSLTTPSDEL
Ga0126383_105925322	3300010398	Tropical Forest Soil	MDRFMDLLAIGVSLAALTLGAAIGWFIARSRFTRKIAELNTNLILERRVNRQLSEAVQIDAVRSFMQAPDLTMPDEPAPEPTVLSG*
Ga0137393_115465981	3300011271	Vadose Zone Soil	DLLSISVSLVALILGAAIGWLIARSRFMRTIAELNSKLVLERRVSKQLSETVQVQVDAVPSLIQAPTTSGEPTHELMVLSG*
Ga0154000_11047751	3300012083	Attine Ant Fungus Gardens	RDMDPLATTVSVFALILGAAIGWLFARSRFTTTIAELNTNLVLERRVNRQLRETVQVDAVPSLIHPPQLTTSSELTREPTAVSG*
Ga0153922_10956551	3300012181	Attine Ant Fungus Gardens	MDLLANMDLLAMSASLVALIVGTAIGWLVARSRFIATIAELNTNLILERRVNKQLSQSLRVDAVPSLIQAPNLTMSAETTREPTMASG*
Ga0137364_100787943	3300012198	Vadose Zone Soil	MDLLTIGASLAALIFGAAIGWLLARSRFTRTVAELNTNLILERRVNRQLSESVQFDAVPRLTREPDLTISGEPTRGTLVPSA*
Ga0137383_107983512	3300012199	Vadose Zone Soil	MGRDMDLLAIGPSLVALIFGAAIGWLIARSRFTRTIAELNTNLILERRVNKQLCESVQFDAVPSLMRAPDLTTLGEPMREPMVPSG*
Ga0137382_101335901	3300012200	Vadose Zone Soil	MSQILSVERGMDLLTIGASLAALIFGAAIGWLVARSRFTRTVAELNTNLILERRVNRQLSESVQFDAVPRLAREPDLTMSGEPTRETLVPSV*
Ga0137365_103535652	3300012201	Vadose Zone Soil	MGRDMHLLAIGASLVALIFGAAIGWLLARSRFTRTIAELNTNLILERRVNKQLCESVQFDAVPSLIRAPDLTTLGEPTRESMVPAG*
Ga0137363_113627132	3300012202	Vadose Zone Soil	MSQILSVERGMDLLTIGASLAALIFGAAIGWLLARSRFTRTVAELNANLILERRVNRQLCESVQFDAVPRLAREPDLTISGEPTRETLVPSA*
Ga0137380_105071313	3300012206	Vadose Zone Soil	LLAIGASLVALIFGAAIGWLLARSRFTRTIAELNTNLILERRVNKQLCESVQFDAVPSLIRAPDLTTLGEPTRESMVPAG*
Ga0137380_106737952	3300012206	Vadose Zone Soil	MDLLSISVSLVALILGAAIGWLIARSRFMRTIAELNSKLVLERRVNKQLSETVQVQVDAVPSLIQAPTTSGEPTHELMVLSG*
Ga0137381_103532212	3300012207	Vadose Zone Soil	MGRDMHLLAIGASLVALIFGAAIGWLLARSRFTRTIAELNTNLILERRVNKQLCESVQFDAVPSLIRAPDLTTLGEPTRESMVPSG*
Ga0137381_108503031	3300012207	Vadose Zone Soil	DSDVANLSMERDMDLLASSASLVALIFGAAIGWLIARSRFMRTIAELNSKLVLERRVNKQLSETVQVQVDAVPSLIQAPTTSGEPTHELMVLSG*
Ga0137379_102480582	3300012209	Vadose Zone Soil	MHLLAIGASLVALIFGAAIGWLLARSRFTRTIAELNTNLILERRVNKQLCESVQFDAVPSLIRAPDLTTLGEPTRESMVPSG*
Ga0137379_106332273	3300012209	Vadose Zone Soil	LIFGAAIGWLLARSRFTRTIAELNTNLILERRVNKQLCESVQFDAVPSLMRAPDLTTLGEPMREPMVPSG*
Ga0137377_104665482	3300012211	Vadose Zone Soil	MSQILSVERGMDLLTIGASLAALIFGAAIGWLLARSRFTRTVAELNTNLILERRVNRQLSESVQFDAMPRLAREPDLTISGEPTRETLVPSA*
Ga0137377_105347233	3300012211	Vadose Zone Soil	MQRDMDLLAIGASLAALIFGAAIGWLLARSRFTRTIAELNTNLILERRVNKQLCESVQFDAVPSLMRAPDLTTLGEPMREPMVPSG*
Ga0137387_106610342	3300012349	Vadose Zone Soil	MGRDMHLLAIGASLVALIFGAAIGWLLARSRFTRTIAELNTNLILERRVNKQLCESVQFDAVPSLMRAPDLTTLGEPMREPMVPSG*
Ga0137386_103912282	3300012351	Vadose Zone Soil	MQRDMDLLAIGASLAALIFGAAIGWLLARSRFTRTIAELNTNLILERRVNKQLCESVQFDAVPSLIRAPDLTTLGEPTRESMVPSG*
Ga0137371_103761931	3300012356	Vadose Zone Soil	MGRDMHLLAIGASLVALIFGAAIGWLLARSRFTRTIAELNTNLILERRVNKQLCEVDAVPSLIRAPDLTTLGEPTRESMVPAG*
Ga0137371_104161932	3300012356	Vadose Zone Soil	MSQILSVERGMDLLTIGASLAALIFGAAIGWLLARSRFTRTVAELNTNLILERRVNRQLSESVQFDAMPRLAREPDLTISGEPTRETLVLSA*
Ga0137360_108830641	3300012361	Vadose Zone Soil	IEADVANLSMQRDMDLLAIGASLAALIFGAAIGWLLARSRFTRTVAELNTNLILERRVNRQLCESVQFDAVPRLTREPDLTISGEPTRETLVPSA*
Ga0137361_104272161	3300012362	Vadose Zone Soil	MQRDMDLLAIGASLAALIFGAAIGWLLARSRFTRTIAELNTNLILERRVNKQLCESVQFDAVPSLIRAPDLTTLGEPT
Ga0182033_107345082	3300016319	Soil	MSQVYSMDRYMDLLAVSGSLAALILGAAIGWFFARSRFTGTIAELNTKLVLERRVNKQLSEAAQIDAMRSLMQAPSLTTPSDDLLREPTALSG
Ga0182035_104295041	3300016341	Soil	DLLAISGSLAALILGAAIGWFLARSRFTRTIAELNTKLVLERRVNKQLSEAAQIDAMRSLMQAPSLTTPSDDLLREPTALSG
Ga0182032_100887583	3300016357	Soil	MSQVYSMDRYMDLLAISGSLAALILGAAIGWFFARSRFTGTIAELNTKLVLERRVNKQLSEAAQIDAMRSLMQAPSLTTPSDDLLREPTALSG
Ga0182034_104019931	3300016371	Soil	ESMSQVYSMDRYMDLLAISGSLAALILGAAIGWFFARSRFTGTIAELNTKLVLERRVNKQLSEAAQIDAMRSLMQAPSLTTPSDDLLREPTALSG
Ga0187802_100004935	3300017822	Freshwater Sediment	MDLLAISVSVAALILGAAIGWFLARSRFITTIAELNTNLVLERRVNKQLSESVQIDAVRSLMQAPGLTTSDEPMREPTASSG
Ga0187806_10298074	3300017928	Freshwater Sediment	LNPMSQICAMDRYMDLLAISVSVAALILGAAIGWFLARSRFITTIAELNTNLVLERRVNKQLSESVQIDAVRSLMQAPGLTTSDEPMREPTASSG
Ga0187779_101149944	3300017959	Tropical Peatland	MDLLAISVSLAALILGAAIGWLLARSRFTRTIAELNTNLVLERRVNKQLSEAVQIDAVRSLVQAPGLTADELTREPTALSG
Ga0187776_107970551	3300017966	Tropical Peatland	MDLLAISVSLAALILGAAIGWLLARSRFTRTIAELNTNLVLERRVNKQLSEAVQIDAVRSLVQAPGLTTDELTREPTALSG
Ga0187780_102407282	3300017973	Tropical Peatland	MDLLAISVSLAALILGAAIGWLLARSRFTRTIAELNTNLVLERRVNKQLSEAVQIDAMRSLVQAPGLTTDELTREPTALSG
Ga0187823_101225192	3300017993	Freshwater Sediment	MDVLAISVSLAALILGAAIGWFLARSRFRTTIAELNTNLVLERRVNKQLSEAVQIDAVRNLIHAPGLTMDEPAREPTLSSG
Ga0187822_100006865	3300017994	Freshwater Sediment	MDLLAISVSVAALILGAAIGWFLARSRFITTIAELNTNLVLERRVNKQLSEPVQIDAVRSLMQAPGLTTSDEPMREPTASSG
Ga0187766_101735842	3300018058	Tropical Peatland	MDLLAIGGSLAALILGAAIGWLIARSRYTRTIAELNTNLVLERRVNKQLSEAVQIDAMRSLVQAPGLTTDELTREPTALSG
Ga0187765_112895782	3300018060	Tropical Peatland	MSQMYSMDRYMDLLAIGGSLAALILGAAIGWLIARSRYTRTIAELNTNLVLERRVNKQLSEAVQIDAMRSLVQAPGLTTDELTREPTALSG
Ga0187774_104474482	3300018089	Tropical Peatland	MDLLAIGGSVAAIILGAAIGWFFARSRFTRTITELNTNLVLERRVNKQLSEAIQFDAVPSWSRAPGPAMSDE
Ga0066667_104826452	3300018433	Grasslands Soil	MDLLTIGASSAALIFGAAIGWLLARSRFTRTVAELNTNLILERRVNKQLSESVQFDAVPRLAREPDLTMSGEPTRETLVPSV
Ga0066669_101777682	3300018482	Grasslands Soil	MDLLTIGASSAALIFGAAIGWLLARSRFTRTVAELNTNLILERRVNKQLCESVQFDAVPRLTREPDLTISGEPTRGTLVPSA
Ga0193729_12518102	3300019887	Soil	MDLLAIGASLVALIFGAAIGWLLARSRFTTAIAELNTNLILERRVNKQLSETVQVQVDAVPRLIQTPNLTPSGEPTREPTVLSG
Ga0187768_10541241	3300020150	Tropical Peatland	MDLLAIGGSLAALILGAAIGWLIARSRYTRTIAELNTNLVLERRVNKQLSEAVQIDAMRSLVQAPGLTTDE
Ga0210406_109926652	3300021168	Soil	MDLLTIGASSAALIFGAAIGWLLARSRFTRTVAELNTNLILERRVNRQLSESVQFDAAPRLTREPDLTISGEPTRETLVPSA
Ga0210384_104239312	3300021432	Soil	MDVLAIGASLVALIFGAAIGWLLARSRFTTAIAELNTNLILERRVNKQLSETVQVQVDAVPRLIQTPNLTPSGEPMREPTVLSG
Ga0126371_100853714	3300021560	Tropical Forest Soil	MSQVYSMDRYMDLLAISGSLAALILGAAIGWFFARSRFTGTIAELNTKLVLERRVNKQLSEAAQIDAMRSLMQAPSLTTPSDELMREPTVLSG
Ga0126371_104627671	3300021560	Tropical Forest Soil	RYMDLLAISSSLAALIFGAAIGWLFARSRFTRTIAELNTKLVLERRVNKQLSEAAQIDAVRSLMQAPGLAMPDEPAREPTALSG
Ga0126371_110134233	3300021560	Tropical Forest Soil	MDLLAGYMDLLSISMSLVALVLGAAIGWLIARSRFRTTIAELNTKLILERRVNKQLYEKAQIDAVAGLMGASNLTTSGEPARQPMAVSG
Ga0212123_100176842	3300022557	Iron-Sulfur Acid Spring	MSQILSVERGMDLLTIGASSAALIFGAAIGWLLARSRFTRTVAELNTNLILERRVNRQLCESVQFDAVPRLAREPDLTISGEPARETLVPSA
Ga0207693_100790754	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MSQLCSIDRYMDLLAIGGGLAALILGAAIGWLFARSRFTRTIAELNTSLVLERRVNKQLSEAVQFDAAPSWSQAPAPTMSDEPVREPTVLSG
Ga0207700_118839261	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	LAIGGSMAALVLGAAIGWLLSRSRFTRTIAELNTSLVLERRVNKQLSEAIQFDAVPSWSQAPGPTMSDESMHEPTALSG
Ga0209474_104285441	3300026550	Soil	MDLLTIGASSAALIFGAAIGWLLARSRFTRTVAELNTNLILERRVNKQLSESVQFDAVPRLAREPDLTIPVEPTR
Ga0209577_108591101	3300026552	Soil	MSQILSVERGMDLLTIGASLAALIFGAAIGWLVARSRFTRTVAELNTNLILERRVNRQLSESVQFDAVPRLAREPDLTMSGEPTRETLVPSV
Ga0207817_10345941	3300026979	Tropical Forest Soil	MDLLAISVSLAALILGAAIGWFLARSRFTRTIAELNTNLVLERRVNKQLSEAAQIDAVRSLVQAPGLTTDELTREPTALSG
Ga0207819_10455801	3300027024	Tropical Forest Soil	MDLLAISVSLAALILGAAIGWFLARSRFTRTIAELNTSLVLERRVNKQLSEAVQIDAVRSLVQAPGLTTDELTH
Ga0207855_10197812	3300027039	Tropical Forest Soil	MDLLAISVSLAALILGAAIGWFLARSRFTRTIAELNTSLVLERRVNKQLSEAVQIDAVRSLVQAPGLTTDELTHEPTALSG
Ga0209325_10099792	3300027050	Forest Soil	MSQIGTMDRYMDLLAIGGSMAALVLGAAIGWLLARSRFTRTIAELNTSLVLERRVNKQLSEAIQFDAVPSWSQAPGPTMSDEPMHEPTALSG
Ga0207826_10558872	3300027680	Tropical Forest Soil	MDLLAISVSLAALILGAAIGWFLARSRFTRTIAELNTNLVLERRVNKQLSEAVQIDAVRSLVQAPGLTTDELTREPTALSG
Ga0209178_10724522	3300027725	Agricultural Soil	MSQIGTMDRYMDLLAIGGSMAALVLGAAIGWLLARSRFTRTIAELNTSLVLERRVNKQLSEAIQFDAVPSWSQAPGPTMSDESMHEPTALSG
Ga0209177_100354312	3300027775	Agricultural Soil	AIGGSMAALVLGAAIGWLLARSRFTRTIAELNTSLVLERRVNKQLSEAIQFDAVPSWSQAPGPTMSDESMHEPTALSG
Ga0209040_101661712	3300027824	Bog Forest Soil	MDLLAISVSLAALILGAAIGWLLARSRFTTTIAELNTNLVLERRVNKQLSEAVQIDAVRSLIQAPGLTTSDEPMREPTASAG
Ga0209180_104549512	3300027846	Vadose Zone Soil	MGRDMDLLAIGASLVALIFGAAIGWLLARSRFTRTIAELNTNLILERRVNKQLCESVQFDAVPSLIRAPDLTTLGEPTRESMVPSG
Ga0209465_103905562	3300027874	Tropical Forest Soil	MDRFMDLLAIGVSLAALTLGAAIGWFIARSRFTRKIAELNTNLILERRVNRQLSEAVQIDAVRSFMQAPDLTMPDEPAPEPTVLSG
Ga0209583_100728802	3300027910	Watersheds	MDLLTIGASSAALIFGAAIGWLLARSRFTRTVAELNTNLILERRVNRQLSESVQFDAMPRLAREPDLTISGEPTRETLVPSA
Ga0209698_103916231	3300027911	Watersheds	LILGAAIGWLLARSRFTTTIAELNTNLVLERRVNKQLSESVQIDAVRSLMQAPGLTTSDEPMREPTASSG
Ga0209526_101736811	3300028047	Forest Soil	MDLLAIGASLVALIFGAAIGWLLARSRFTTAIAELNTNLILERRVNKQLSETVQVQVDAVPRLIQTPNLTPSGELTREPTVL
Ga0308309_105338652	3300028906	Soil	MDVLAIGASLVALIFGAAIGWLLARSRFTTAIAELNTNLILERRVNKQLSETVQVQVDAVPRLIQTPNLTPSGEPTREPTVLSG
Ga0222749_103827082	3300029636	Soil	MDVLAIGASLVALIFGAAIGWLLARSRFTTAMAELNTNLILERRVNKQLSETVQVQVDAVPRLIQTPNLTPSGEPTREPTVLSG
Ga0075405_116897411	3300030847	Soil	MDLLTIGASLAALIFGAAIGWLLARSRFTRTVAELNTNLILERRVNRQLSESVQFDAMPRLAQEPDLTISGEPTRETLVPSA
Ga0075386_120745082	3300030916	Soil	MDLLTIGASLAALIFGAAIGWLLARSRFTRTVAELNTNLILERRVNRQLSESVQFDAVPRLTRDPDLTISGEPTRETLVPSA
Ga0075394_119237042	3300030969	Soil	MDLLTIGASLAALIFGAAIGWLLARSRFTRTVAELNTNLILERRVNRQLSESVQFDAVPRLAREPDLTISGEPTRETLVPSA
Ga0170824_1250024461	3300031231	Forest Soil	ILSVERGMDLLTIGASLAALIFGAAIGWLLARSRFTRTVAELNTNLILERRVNRQLSESVQFDAMPRLAQEPDLTISGEPTRETLVPSA
Ga0318541_100689405	3300031545	Soil	MDLLAISGSLAALILGAAIGWFLARSRFTRTIAELNTKLVLERRVNKQLSEAAQIDAMRSLMQAPSLTTPSDELMR
Ga0310915_100630954	3300031573	Soil	MSQVYSMDRYMDLLAISGSLAALILGAAIGWFLARSRFTRTIAELNTKLVLERRVNKQLSEAAQIDAMRSLMQAPSLTTPSDDLLREPTALSG
Ga0306917_103854271	3300031719	Soil	ISGSLAALILGAAIGWFLARSRFTRTIAELNTKLVLERRVNKQLSEAAQIDAMRSLMQAPSLTTPSDDLLREPTALSG
Ga0318500_100704511	3300031724	Soil	MDRYMDLLAISGSLAALILGAAIGWFLARSRFTRTIAELNTKLVLERRVNKQLSEAAQIDAMRSLMQAPSLTTPSDDLLREPTALSG
Ga0318501_106401651	3300031736	Soil	GSLAALILGAAIGWFLARSRFTRTIAELNTKLVLERRVNKQLSEAAQIDAMRSLMQAPSLTTPSDDLLREPTALSG
Ga0318502_104617051	3300031747	Soil	MDLLAISGSLAALILGAAIGWFLARSRFTRTIAELNTKLVLERRVNKQLSEAAQIDAMRSLMQAPSLTTPSDDLLREPTRCPARCGAPKP
Ga0318535_103525701	3300031764	Soil	MDLLAISGSLAALILGAAIGWFLARSRFTRTIAELNTKLVLERRVNKQLSEAAQIDAMRSLMQAPSLTT
Ga0318552_106511992	3300031782	Soil	MDLLAISGSLAALILGAAIGWFLARSRFTRTIAELNTKLVLERRVNKQLSEAAQIDAMRSLMQAPSLTTPSDDL
Ga0318548_104304862	3300031793	Soil	MDLLAISGSLAALILGAAIGWFLARSRFTRTIAELNTKLVLERRVNKQLSEAAQIDAMRSLMQAPSLTTPSDELLREPTALSG
Ga0318550_105439742	3300031797	Soil	LILGAAIGWFLARSRFTRTIAELNTKLVLERRVNKQLSEAAQIDAMRSLMQAPSLTTPSDELMREPTVLSG
Ga0306921_101806541	3300031912	Soil	DRYMDLLAISGSLAALILGAAIGWFLARSRFTRTIAELNTKLVLERRVNKQLSEAAQIDAMRSLMQAPSLTTPSDDLLREPTALSG
Ga0310912_103198671	3300031941	Soil	MSQVYSMDRYMDLLAISGSLAALILGAAIGWFLARSRFTRTIAELNTKLVLERRVNKQLSEAAQIDAMRSLMQAPSLTTPSDDLLREPTRCPARCGAPKP
Ga0310916_103507341	3300031942	Soil	YMDLLAISGSLAALILGAAIGWFLARSRFTRTIAELNTKLVLERRVNKQLSEAAQIDAMRSLMQAPSLTTPSDDLLREPTALSG
Ga0310909_104993441	3300031947	Soil	IGWFLARSRFTRTIAELNTKIVLERRVNKQHSEAAQIDAMRSLMQAPSLTTPSDDLLREPTALSG
Ga0306926_112016462	3300031954	Soil	MSQVYSMDRYMDLLAVSGSLAALILGAAIGWFFARSRFTGTIAELNTKLVLERRVNKQLSEAAQIDAMRSLMQAPSLTTPSDELMREPTVLSG
Ga0318531_100753652	3300031981	Soil	MDLLAISGSLAALILGAAIGWFLARSRFTRTIAELNTKLVLERRVNKQLSEAAQIDAMRSLMQAPSLTTPSDDLLREPTALSG
Ga0310911_100454201	3300032035	Soil	SGSLAALILGAAIGWFLARSRFTRTIAELNTKLVLERRVNKQLSEAAQIDAMRSLMQAPSLTTPSDDLLREPTALSG
Ga0318510_101017061	3300032064	Soil	LILGAAIGWFLARSRFTRTIAELNTKLVLERRVNKQLSEAAQIDAMRSLMQAPSLTTPSDDLLREPTALSG
Ga0335081_100428411	3300032892	Soil	MDVLAISVSLAALILGAAIGWFLARSRFRTTIAELNTNLVLERRVNKQLSEAVQIDAVRNLIHAPGLTMGEPARE
Ga0318519_100525524	3300033290	Soil	FAVARDCVESMSQVYSMDRYMDLLAISGSLAALILGAAIGWFLARSRFTRTIAELNTKLVLERRVNKQLSEAAQIDAMRSLMQAPSLTTPSDDLLREPTALSG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F059312

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences