Metagenome / Metatranscriptome Family F059283

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F059283
Family Type	Metagenome / Metatranscriptome
Number of Sequences	134
Average Sequence Length	64 residues
Representative Sequence	MPNHLVSQSFVAAMAKPRAPSWRARHADMTRMEFIGLVAGWSTALVMVLALSVFIRFIG
Number of Associated Samples	92
Number of Associated Scaffolds	134

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	52.67 %
% of genes near scaffold ends (potentially truncated)	41.79 %
% of genes from short scaffolds (< 2000 bps)	88.81 %
Associated GOLD sequencing projects	78
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.44

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (81.343 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (29.851 % of family members)
Environment Ontology (ENVO)	Unclassified (44.776 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (56.716 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 56.32% β-sheet: 0.00% Coil/Unstructured: 43.68%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.44
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.44
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 134 Family Scaffolds
PF04324	Fer2_BFD	50.00
PF00561	Abhydrolase_1	10.45
PF08386	Abhydrolase_4	3.73
PF12833	HTH_18	2.24
PF06980	DUF1302	1.49
PF05990	DUF900	1.49
PF03401	TctC	0.75
PF12697	Abhydrolase_6	0.75
PF07690	MFS_1	0.75

COG ID	Name	Functional Category	% Frequency in 134 Family Scaffolds
COG4782	Esterase/lipase superfamily enzyme	General function prediction only [R]	1.49
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	0.75

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	81.34 %
Unclassified	root	N/A	18.66 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	81.34 %
Unclassified	root	N/A	18.66 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	81.34 %
Unclassified	root	N/A	18.66 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	81.34 %
Unclassified	root	N/A	18.66 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	67.16 %
Unclassified	root	N/A	18.66 %

Name	Rank	Taxonomy	Distribution
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	64.18 %
Unclassified	root	N/A	18.66 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	18.66 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	16.42 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	18.66 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	15.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	18.66 %
Bradyrhizobium elkanii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	1.49 %
Bradyrhizobium japonicum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	0.75 %
Bradyrhizobium jicamae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium jicamae	0.75 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2040502001\|FACENC_GAMC6GA01BQS5Z	Not Available	525	Open in IMG/M
2199352025\|deepsgr__Contig_189048	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	511	Open in IMG/M
3300001431\|F14TB_106359393	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	568	Open in IMG/M
3300001867\|JGI12627J18819_10153793	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	936	Open in IMG/M
3300004633\|Ga0066395_10670503	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	613	Open in IMG/M
3300005354\|Ga0070675_100175517	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1850	Open in IMG/M
3300005436\|Ga0070713_101677914	Not Available	617	Open in IMG/M
3300005437\|Ga0070710_10413296	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	907	Open in IMG/M
3300005439\|Ga0070711_100056753	All Organisms → cellular organisms → Bacteria → Proteobacteria	2709	Open in IMG/M
3300005439\|Ga0070711_101105254	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	683	Open in IMG/M
3300005615\|Ga0070702_100983246	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	667	Open in IMG/M
3300005616\|Ga0068852_101777085	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	639	Open in IMG/M
3300005719\|Ga0068861_101023523	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	790	Open in IMG/M
3300005764\|Ga0066903_100075751	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4347	Open in IMG/M
3300005764\|Ga0066903_100457764	All Organisms → cellular organisms → Bacteria → Proteobacteria	2136	Open in IMG/M
3300005764\|Ga0066903_100534162	All Organisms → cellular organisms → Bacteria → Proteobacteria	2003	Open in IMG/M
3300005764\|Ga0066903_101082339	All Organisms → cellular organisms → Bacteria → Proteobacteria	1476	Open in IMG/M
3300005764\|Ga0066903_102762000	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	952	Open in IMG/M
3300005764\|Ga0066903_103355289	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	865	Open in IMG/M
3300005764\|Ga0066903_104954397	Not Available	707	Open in IMG/M
3300005764\|Ga0066903_108231913	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	533	Open in IMG/M
3300005764\|Ga0066903_109093503	Not Available	502	Open in IMG/M
3300006173\|Ga0070716_100276545	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1156	Open in IMG/M
3300006175\|Ga0070712_100699646	Not Available	864	Open in IMG/M
3300006175\|Ga0070712_100735322	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	843	Open in IMG/M
3300006175\|Ga0070712_100919630	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	755	Open in IMG/M
3300006881\|Ga0068865_101719055	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	566	Open in IMG/M
3300009176\|Ga0105242_11135255	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	797	Open in IMG/M
3300010362\|Ga0126377_12299988	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	615	Open in IMG/M
3300010366\|Ga0126379_10902558	Not Available	986	Open in IMG/M
3300010376\|Ga0126381_104840362	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	517	Open in IMG/M
3300010396\|Ga0134126_10382797	All Organisms → cellular organisms → Bacteria → Proteobacteria	1636	Open in IMG/M
3300010399\|Ga0134127_11309973	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	794	Open in IMG/M
3300012685\|Ga0137397_10343350	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium jicamae	1113	Open in IMG/M
3300012944\|Ga0137410_10103808	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2111	Open in IMG/M
3300012957\|Ga0164303_10548995	All Organisms → cellular organisms → Bacteria → Proteobacteria	750	Open in IMG/M
3300012958\|Ga0164299_10092405	All Organisms → cellular organisms → Bacteria → Proteobacteria	1550	Open in IMG/M
3300012971\|Ga0126369_11951591	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	675	Open in IMG/M
3300012984\|Ga0164309_10109772	All Organisms → cellular organisms → Bacteria → Proteobacteria	1760	Open in IMG/M
3300012985\|Ga0164308_10393856	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1131	Open in IMG/M
3300012986\|Ga0164304_10143442	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1494	Open in IMG/M
3300012987\|Ga0164307_10086653	All Organisms → cellular organisms → Bacteria → Proteobacteria	1920	Open in IMG/M
3300012987\|Ga0164307_11037380	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	670	Open in IMG/M
3300012988\|Ga0164306_10529099	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	912	Open in IMG/M
3300012989\|Ga0164305_10990304	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	714	Open in IMG/M
3300013100\|Ga0157373_11429078	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	526	Open in IMG/M
3300013297\|Ga0157378_10624596	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1091	Open in IMG/M
3300015371\|Ga0132258_11481614	Not Available	1714	Open in IMG/M
3300015371\|Ga0132258_11784165	All Organisms → cellular organisms → Bacteria → Proteobacteria	1551	Open in IMG/M
3300015374\|Ga0132255_102695981	Not Available	760	Open in IMG/M
3300016270\|Ga0182036_11689636	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	534	Open in IMG/M
3300016294\|Ga0182041_10077655	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2362	Open in IMG/M
3300016319\|Ga0182033_10298927	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1328	Open in IMG/M
3300016357\|Ga0182032_10935602	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	738	Open in IMG/M
3300016357\|Ga0182032_11172268	Not Available	660	Open in IMG/M
3300016371\|Ga0182034_10593484	Not Available	934	Open in IMG/M
3300016371\|Ga0182034_10674037	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	877	Open in IMG/M
3300016371\|Ga0182034_11833405	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	535	Open in IMG/M
3300016387\|Ga0182040_10614693	All Organisms → cellular organisms → Bacteria → Proteobacteria	881	Open in IMG/M
3300016387\|Ga0182040_10695852	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	831	Open in IMG/M
3300016404\|Ga0182037_10409525	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1119	Open in IMG/M
3300016422\|Ga0182039_11987182	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	535	Open in IMG/M
3300016445\|Ga0182038_10431932	All Organisms → cellular organisms → Bacteria → Proteobacteria	1111	Open in IMG/M
3300016445\|Ga0182038_11001616	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	740	Open in IMG/M
3300017792\|Ga0163161_11174916	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	662	Open in IMG/M
3300017792\|Ga0163161_11486752	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	594	Open in IMG/M
3300017970\|Ga0187783_11013400	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	598	Open in IMG/M
3300017974\|Ga0187777_10090381	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2002	Open in IMG/M
3300021372\|Ga0213877_10144196	All Organisms → cellular organisms → Bacteria → Proteobacteria	749	Open in IMG/M
3300021478\|Ga0210402_11800696	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	538	Open in IMG/M
3300022512\|Ga0242676_1019377	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	698	Open in IMG/M
3300022713\|Ga0242677_1034702	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	689	Open in IMG/M
3300024288\|Ga0179589_10505022	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	561	Open in IMG/M
3300025898\|Ga0207692_11187928	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	506	Open in IMG/M
3300025915\|Ga0207693_10640518	Not Available	826	Open in IMG/M
3300025915\|Ga0207693_11208541	Not Available	569	Open in IMG/M
3300025916\|Ga0207663_10836445	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	734	Open in IMG/M
3300025935\|Ga0207709_11636497	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	535	Open in IMG/M
3300025937\|Ga0207669_11521577	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	571	Open in IMG/M
3300025939\|Ga0207665_10013438	All Organisms → cellular organisms → Bacteria → Proteobacteria	5384	Open in IMG/M
3300027502\|Ga0209622_1030845	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	955	Open in IMG/M
3300027703\|Ga0207862_1015837	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2228	Open in IMG/M
3300031546\|Ga0318538_10538162	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	633	Open in IMG/M
3300031546\|Ga0318538_10787279	Not Available	516	Open in IMG/M
3300031561\|Ga0318528_10340123	Not Available	806	Open in IMG/M
3300031573\|Ga0310915_10683097	All Organisms → cellular organisms → Bacteria → Proteobacteria	725	Open in IMG/M
3300031718\|Ga0307474_10066005	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2682	Open in IMG/M
3300031719\|Ga0306917_10253527	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1349	Open in IMG/M
3300031719\|Ga0306917_10492487	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	962	Open in IMG/M
3300031736\|Ga0318501_10518026	Not Available	651	Open in IMG/M
3300031744\|Ga0306918_10121771	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1891	Open in IMG/M
3300031744\|Ga0306918_10867299	All Organisms → cellular organisms → Bacteria → Proteobacteria	704	Open in IMG/M
3300031753\|Ga0307477_11151711	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	505	Open in IMG/M
3300031764\|Ga0318535_10315887	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	699	Open in IMG/M
3300031792\|Ga0318529_10509997	Not Available	559	Open in IMG/M
3300031833\|Ga0310917_10200594	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1334	Open in IMG/M
3300031833\|Ga0310917_10811982	Not Available	631	Open in IMG/M
3300031879\|Ga0306919_10101236	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2027	Open in IMG/M
3300031879\|Ga0306919_10167298	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1616	Open in IMG/M
3300031879\|Ga0306919_10397269	Not Available	1057	Open in IMG/M
3300031890\|Ga0306925_10247616	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1920	Open in IMG/M
3300031890\|Ga0306925_10853180	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	941	Open in IMG/M
3300031890\|Ga0306925_10999648	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	853	Open in IMG/M
3300031890\|Ga0306925_11758659	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	596	Open in IMG/M
3300031912\|Ga0306921_10446969	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1506	Open in IMG/M
3300031912\|Ga0306921_10923812	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	989	Open in IMG/M
3300031912\|Ga0306921_11775216	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	664	Open in IMG/M
3300031912\|Ga0306921_12350202	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	557	Open in IMG/M
3300031942\|Ga0310916_10416658	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1143	Open in IMG/M
3300031946\|Ga0310910_10509259	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	955	Open in IMG/M
3300031947\|Ga0310909_10226061	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1560	Open in IMG/M
3300031954\|Ga0306926_10618675	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1321	Open in IMG/M
3300031954\|Ga0306926_10832049	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1110	Open in IMG/M
3300031954\|Ga0306926_11260818	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	865	Open in IMG/M
3300031954\|Ga0306926_11698079	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	721	Open in IMG/M
3300032001\|Ga0306922_11100729	Not Available	814	Open in IMG/M
3300032039\|Ga0318559_10299918	All Organisms → cellular organisms → Bacteria → Proteobacteria	746	Open in IMG/M
3300032059\|Ga0318533_11037039	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	601	Open in IMG/M
3300032066\|Ga0318514_10235891	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	962	Open in IMG/M
3300032076\|Ga0306924_11892715	Not Available	619	Open in IMG/M
3300032090\|Ga0318518_10661695	Not Available	532	Open in IMG/M
3300032205\|Ga0307472_101610346	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	638	Open in IMG/M
3300032261\|Ga0306920_100505165	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1794	Open in IMG/M
3300032261\|Ga0306920_100643500	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1566	Open in IMG/M
3300032261\|Ga0306920_101595955	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	928	Open in IMG/M
3300032261\|Ga0306920_102333008	All Organisms → cellular organisms → Bacteria → Proteobacteria	740	Open in IMG/M
3300032261\|Ga0306920_103709042	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	560	Open in IMG/M
3300033289\|Ga0310914_10107504	All Organisms → cellular organisms → Bacteria → Proteobacteria	2410	Open in IMG/M
3300033289\|Ga0310914_10192494	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1818	Open in IMG/M
3300033289\|Ga0310914_10958581	Not Available	755	Open in IMG/M
3300033289\|Ga0310914_11357921	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	613	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	88.81%
Host-Associated	Host-Associated	11.19%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	88.81%
Plants	Host-Associated → Plants	11.19%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	88.81%
Rhizoplane	Host-Associated → Plants → Rhizoplane	6.72%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.48%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	64.93%
Loam	Environmental → Terrestrial → Soil → Loam	22.39%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.48%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.99%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.24%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.49%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.49%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	49.25%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	15.67%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	11.94%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	9.70%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.48%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.99%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.24%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.49%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.49%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.75%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	29.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	17.16%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	10.45%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	8.21%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.72%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.99%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.24%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.24%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.24%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.49%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.49%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.49%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.49%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.49%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.49%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.49%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.49%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.49%
Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Bulk Soil	0.75%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.75%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.75%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.75%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.75%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.75%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2040502001	Soil microbial communities from sample at FACE Site 2 North Carolina CO2+	Environmental	Open in IMG/M
2199352025	Soil microbial communities from Rothamsted, UK, for project Deep Soil - DEEP SOIL	Environmental	Open in IMG/M
3300001431	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemly	Environmental	Open in IMG/M
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013100	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300021372	Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R01	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300022512	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022713	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300024288	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300027502	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027703	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 81 (SPAdes)	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
FACENCE_2930710	2040502001	Soil	MRSRLASQSFVAAIAAPRAPSWRARHADMTRKGFIWLVAGWCTALVLILAVSA
deepsgr_03256250	2199352025	Soil	VAFRDASEGAEMRNHLVSQSFVAAMAKPRAPSWRARHADMTRMGFIGLVAGWSTALVVVLALSVSPHSLVRRRR
F14TB_1063593932	3300001431	Soil	MRSRIAPQSFVAAMPRPAGPSRRAGHADMSRMGFIGLMAGWCSALVLILALSAFIRFVG*
JGI12627J18819_101537932	3300001867	Forest Soil	MSSLFRDALEGAEMRSHLISQPFGRHGHASRCARHADMTPREFIGLVAGWSTALVVVLALSVFIQFLD*
Ga0066395_106705031	3300004633	Tropical Forest Soil	MRSHGASQSFVAAMTAPPAPSWRARGADMTRKGFIGLVAGWCSALVLVLAVSAFIRFVG*
Ga0068869_1013679551	3300005334	Miscanthus Rhizosphere	PGQLSPAASILLSSLAMSSLFRDATEEAEMPKRPVSQSFVPAMTRPRAPSWRARDAKMSPMEFIGLVAGWSTALVAVFGLSVFIRFIG*
Ga0070675_1001755173	3300005354	Miscanthus Rhizosphere	MSSLFRDATEEAEMPKRPVSQSFVPAMTRPRAPSWRARDAKMSPMEFIGLVAGWSTALVAVFGLSVFIRFIG*
Ga0070714_1009029903	3300005435	Agricultural Soil	GQLSPAASILLSSLAMSSLFRDATEEAEMPKRPVSQSFVPAMTRPRAPSWRARDAKMSPMEFIGLVAGWSTALVAVFGLSVFIRFIG*
Ga0070713_1016779142	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MPNQLVSQSFVAAMAKPRAPSWRARHADMTRMEFIGLVAGWSTALVVVLALSVFTRFIG*
Ga0070710_104132961	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MRSRLASQSFVAAIAAPRAPSWRARHADMTRKGFIWLVAGWCTALVLILAVSAFIRFIG*
Ga0070711_1000567534	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MRDHLVSQSFVAAMARPRAPSWRARHADMTQMEFIGLVAGWSTALVVVLALSVFIRFLG*
Ga0070711_1011052543	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	SFVAAMVAPPTPSWRARQAPMTRMGFIELVGGWCSALVLILALSAFIRFVG*
Ga0070702_1009832461	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	MPNHLVSQSFVAAMAKPRAPSWRARHADMTRMEFIGLVAGWSIAFVVVLALSVFTRFIG*
Ga0068852_1017770852	3300005616	Corn Rhizosphere	MPNYPASQSFVAAAARPRAPSWRARHADMTRMEFIGLVAGWSTAIVVVLALSVFTRFIG*
Ga0068861_1010235233	3300005719	Switchgrass Rhizosphere	SIHLSSFAMSSLFRDASEGAEMRDHLVSQSFVAAMARPRAPSWRARHADMTQMEFIGLVAGWSTALVVVLALSVFIRFIG*
Ga0066903_1000757512	3300005764	Tropical Forest Soil	MHSRLAFQSFVAGMAAPRAPSRRAGQADMCRKDFIGLVAGWTSALVLILALSAFIRFIG*
Ga0066903_1004577644	3300005764	Tropical Forest Soil	MRRQIASQSFVAAMPRPAAPSRRASRADMSRMGFIWLVTGWWSAFLLALFVSALIRFVG*
Ga0066903_1005341622	3300005764	Tropical Forest Soil	MSSLFRDASEEAEMPNHLVSQSIAAATAKPRTPSWRARHADMSRKEFIGLVTGWSTAVVVVLALSVFIRFIG*
Ga0066903_1010823393	3300005764	Tropical Forest Soil	MPNHLVSQSFVAAMARPRAPSWRARHVHMTQMEFIGLVAGWSTALLVVLALSVFIRFVG*
Ga0066903_1027620002	3300005764	Tropical Forest Soil	MPNRLVSQSFVAAMARPRAPSWRARHADMTRMEFIGLVAGWSSALVAVLALSVFIRFIG*
Ga0066903_1033552893	3300005764	Tropical Forest Soil	AFHADAPRERKMHNRPAQQLFVAAMAAPPAPSWRARGADMTRKGFIGLVAGWCSALVLILALSAFIRFVG*
Ga0066903_1049543972	3300005764	Tropical Forest Soil	MRSRLASQSFVAAMTAPPAPSCRARGADMTRKGFIGLVAGWCIALVLILAVSVFIRFVG*
Ga0066903_1082319131	3300005764	Tropical Forest Soil	MRSHRASQSFVAAMTAPPAPSWRARGADMTRKGFIGLVAGWCSALVLVLAVSAFIRFVG*
Ga0066903_1090935032	3300005764	Tropical Forest Soil	MPNHLLSQPFVAAMPRPRAPSWRARDAEMSRLEFIGLVAGWSTAVVVVLALSVFIRFIG*
Ga0070716_1002765453	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MSSLFRDAAEGAEMPNHLVSQSFVAAMATPRAPSWRARHADMSRMGFIGLVAGWSTALVVVLALSVSSDFTG*
Ga0070712_1006996461	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MRSRLASQSFVAAIAAPRAPSWRARHADMTRKGFIWLVAGWCTALVLILAVSAFVRFAG*
Ga0070712_1007353221	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	EGAEMPNHLVSQSFVAAMAKPRAPSWRARHADMTQMEFIGLVAGWSIALVVVLALSVFTRFIG*
Ga0070712_1009196302	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MPNRLVSQSFAAATARPRAPSWRARHADMTRMEFIGLVAGWSTAVVVVLALSVFIRFIG*
Ga0068865_1017190552	3300006881	Miscanthus Rhizosphere	MSSLFRDASEGAEMPNHLVSQSFVAAMAKPRAPSWRARHADMTRMEFIGLVAGWSTAIVVVLALSVFTRFIG*
Ga0105242_111352552	3300009176	Miscanthus Rhizosphere	MSSLFRDASEGAEMPNHLVSQSFVAAMATPRAPSWRARHADMTRMEFIGLVVGWSIALVVVLALSVFTRFIG*
Ga0126377_122999881	3300010362	Tropical Forest Soil	DASEGAEMPNHPVSQSFVAAMAKPRARSWRARHADMTRMEFIGLVAGWSTALVVVLALSVFTRFIG*
Ga0126379_109025583	3300010366	Tropical Forest Soil	WRQHSSIFLRVSSLFGDASEGAEMPNHLVSQSFVAAMARPRAPSWRARHVHMTQMEFIGLVAGWSTALLVVLALSVFIRFVG*
Ga0126381_1048403621	3300010376	Tropical Forest Soil	FVAAIAAPRAPSWRARRADMCRKDFIGLVAGWSSALVLVLALSAFIRFVG*
Ga0134126_103827974	3300010396	Terrestrial Soil	LSSLAMSSLFRDATEEAEMPKRPVSQSFVPAMTRPRAPSWRARDAKMSPMEFIGLVAGWSTALVAVFGLSVFIRFIG*
Ga0134127_113099733	3300010399	Terrestrial Soil	SSFSMSSLFRDATEEAEMPKRPVSQSFVPAMTRPRAPSWRARDAKMSPMEFIGLVAGWSTALVAVFGLSVFIRFIG*
Ga0137397_103433501	3300012685	Vadose Zone Soil	MRNHLVSQSFVAAMAKPRAPSWRARHADMTRMEFIGLVAGWSTALVVVLALSVFTRFIG*
Ga0137410_101038084	3300012944	Vadose Zone Soil	VSQSFVAAMAKPRAPSWRARHADMTRMEFIGLVAGWSTALVAVFIRLIGIG*
Ga0164303_105489953	3300012957	Soil	RCRRHAAASQGAKMRSRLASQSFVAAIAPRAPSWRARHADMTRKGFIWLVAGWCTALVLILAVSAFVRFAG*
Ga0164299_100924052	3300012958	Soil	MSSLFRDASEGAEMPNHLVSQSFVAAMAKPRAPSWRARHADMTRMEFIGLVAGWSTALVVVLALSVFIRFLG*
Ga0126369_119515911	3300012971	Tropical Forest Soil	SIHLSSFAMSPSLFRGASKGAEMPNRLVSQSFVAAMARPRAPSWRARHADMTRMEFIGLVAGWSSTLVAVLALSVFIRFIG*
Ga0164309_101097721	3300012984	Soil	MSSLFRDAAEGAEMPNHLVSQSFVAAMARPRAPSWRARHADMTQMEFIGLVAGWSTALVVVLALSVFIRFIG*
Ga0164308_103938561	3300012985	Soil	FAMSSLFRDTSEGAEMPNHLVSQSFVAAMAKPRAPSWRARHADMTQMEFIGLVAGWSIALVVVLALSVFTRFIG*
Ga0164304_101434424	3300012986	Soil	FLRCRRHTDASQEAKMRSRLASQSFVAAIAAPRAPSWRARHADMTRKGFIWLVAGWCTALVLILAVSAFVRFAG*
Ga0164307_100866533	3300012987	Soil	MSSLFRDAAEGAEMPNHLVSQSFVAAMATPRAPSWRARHADMTRMEFIGLVAGWSTALVVVLALSVSSDFTG*
Ga0164307_110373801	3300012987	Soil	SFLAAIAAPPAPSWRARHADMTRKGFIGLVAGWCSALVLILAVSAFIRFIG*
Ga0164306_105290992	3300012988	Soil	MPNHLVSQSFVAAMAKPRAPSWRARHADMTRMEFIGLVAGWSTALVMVLALSVFIRFIG*
Ga0164305_109903042	3300012989	Soil	MSSLFRDAAEGAEMPNHLVSQSFVAAMARPRAPSWRARHADMTRMEFIGLVAGWSTALVVVLALSVSSDFTG*
Ga0157373_114290781	3300013100	Corn Rhizosphere	EAEMPKRPVSQSFVPAMTRPRAPSWRARDAKMSPMEFIGLVAGWSTALVAVFGLSVFIRFIG*
Ga0157378_106245963	3300013297	Miscanthus Rhizosphere	MSSLFRDATEEAEMPKRPVSQSFVPAMTRPRAPSWRARDAKMSPMEFIGLVAGWSTALVVVLALSVFTRFIG*
Ga0132258_114816142	3300015371	Arabidopsis Rhizosphere	MHSRLASQSFVAAFAAPRAPSRRARQADMCRKDFIGLVAGWSTALVLILAVSAFIRFVG*
Ga0132258_117841652	3300015371	Arabidopsis Rhizosphere	MHNHLVSQSFVAAMAKPRAPSWRARQADMTRMGFIGLVAGWSTALVVVLALSVSSNFIG*
Ga0132255_1026959811	3300015374	Arabidopsis Rhizosphere	MPNQLVSQSFVAAMAKPRAPSCRARHADMTRMEFIGLVAGWSTALVVVLAL
Ga0182036_116896361	3300016270	Soil	RLHLSSFVMSSSPSHDASEDAEMPNHLVSQSFAAATARSRAPSWRARRADMSRMEFIGLVAGWSSAVVVLLALSVSIRFIG
Ga0182041_100776554	3300016294	Soil	MPNVLVSQSSAAAPARPQAPSWRARHADMARMEFIGLVAGWSTSVVVVLALSVFIRFIG
Ga0182033_102989273	3300016319	Soil	MRSRLASESFVAAMAAPPAPSWRARHADMTWKGFIGLAAGWCSALVLILVLSAFIRFVG
Ga0182032_109356021	3300016357	Soil	SISSAFIYLPACVVAFHGDASREPKMHSRLASQSFVAAIAARRAPSWRARQADMCRKDFIGLVAGWSSALVLILALSAFIRFVG
Ga0182032_111722681	3300016357	Soil	MPNHLVSQSFAAATARPRAPSWRARRADMSRMEFIGLVAGWSTAVVGVLALSVFIRFIG
Ga0182034_105934842	3300016371	Soil	MPNHLVSQSFAAATARPRAPSWRARRADMSRMEFIGLVAGWSTAVVVLLALSLLIRFIG
Ga0182034_106740371	3300016371	Soil	MRSHRASQSFVAAMTAPPAPSWRARGADMTRKGFIGLVAGWCSALVLILAVSAFIRFVG
Ga0182034_118334052	3300016371	Soil	LSQSFVAGMPGRRAPSRRAGNTDMTRKGFIGLVAGWSTALVLILALSAFIRFIG
Ga0182040_106146931	3300016387	Soil	MPSRLASQSFPAAMVAPLAPSWRARNADMTRKVFIGLAAGWCGALVLILAVSAFIRFAG
Ga0182040_106958521	3300016387	Soil	MPNHLVSQSFVAATARPRAPSWRARHADMTRTEFVGLVAGWSTALMVVLALSVFIRFI
Ga0182037_104095252	3300016404	Soil	MPNRLVSQSFVAATARPRAPSWRARHADMTRMEFIGLVAGWSSALVAVLALSVFIRFIG
Ga0182039_119871821	3300016422	Soil	MPNHLVSQPFVAAMPRPRAPSWRARDAEMSRLEFIGLVAGWSTALVVVLALSVFIQFIG
Ga0182038_104319322	3300016445	Soil	MSVSVFRDASEGAEMPNHLVSQPFVAAMPRPRAPSWRARDAEMSRLEFIGLVAGWSTAVVVVLALSVFIRFIG
Ga0182038_110016161	3300016445	Soil	RLNPGDSIHLSSFAMSPSLFRGASKGAEMPNRLVSQSFVAATSRPRAPSWRARHADMTRLEFIGLVAGWSSALVAVLALSVFIRFIG
Ga0163161_111749162	3300017792	Switchgrass Rhizosphere	MPNQLVSQSFVAAMAKPRAPSWRARHADMTRMEFIGLVVGWSTALVVVLALSVFTRFIG
Ga0163161_114867521	3300017792	Switchgrass Rhizosphere	MPNHLVSQSFVAAMAKPRAPSWRARHADMTQMEFIGLVAGWSTALVVVLALSVFIRFIG
Ga0187783_110134001	3300017970	Tropical Peatland	AFIYLPSRRLSSLFRDASEGAEMRKHLVFQSFVATMARPRAPSWRARHADMTPMEFIGLVAGWSTALVVLLALLLFIRFIG
Ga0187777_100903813	3300017974	Tropical Peatland	MPNRLVSQPFVAAMPRPRAPSWRARDAHMTRQEFIGLVAGWSTALVVVLALSVFIRFIG
Ga0213877_101441963	3300021372	Bulk Soil	RKMHCRLASQSFVAAIATPRAPSWRARQADMSRKDFIGLVAGWSSALVLILALSAFIRFI
Ga0210402_118006962	3300021478	Soil	MSSLFGDASEGAEMRNHLVSQSFVAAMAKPRAPSWRARHADMTRMEFIGLVAGWSTALVVVLALSVFIRFIG
Ga0242676_10193773	3300022512	Soil	TPQKGAEMRNHLVSQSFVAAMAKPRAPSWRARHADMTRMEFIGLVAGWSTALVVVLALSVFIRFIG
Ga0242677_10347023	3300022713	Soil	RFGDASEGAEMRNHLVSQSFVPAMAKPRAPSWRARHADMTRMEFIGLVAGWSTALVVVLALSVFIRFIG
Ga0179589_105050222	3300024288	Vadose Zone Soil	MRNHLVSQSFVAAMAPPRAPSWRARHADMTRMEFIGLVAVWSTALVVVLALSVFIRFIG
Ga0207692_111879281	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MRSRLASQSFVAAIAAPRAPSWRARHADMTRKGFIWLVAGWCTALVLILAVSAFVRFAG
Ga0207693_106405182	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MPNHLVSQSFVAAMAKPRAPSWRARHADMTQMEFIGLVAGWSIALVVVSAVS
Ga0207693_112085411	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MPNRLVSQSFAAATARPRAPSWRARHADMTRMEFIGLVAGWSTAVVVVLALS
Ga0207663_108364451	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MPNQLVSQSFVAAMAKPRAPSWRARHADMTRMEFIGLVAGWSIAFVVVLALSVFTRFIG
Ga0207664_112190433	3300025929	Agricultural Soil	GQLSPAASILLSSLAMSSLFRDATEEAEMPKRPVSQSFVPAMTRPRAPSWRARDAKMSPMEFIGLVAGWSTALVAVFGLSVFIRFIG
Ga0207709_116364971	3300025935	Miscanthus Rhizosphere	MPNHLVSQSFVAAMAKPRAPSWRARHADMTRMEFIGLVVGWSTALVVVLALSVFTRFIG
Ga0207669_115215773	3300025937	Miscanthus Rhizosphere	DAPEGAEMPNQLVSQSFVAAMAKPRAPSWRARHADMTRMEFIMIAAGWSTAFVSVFIRFIGY
Ga0207665_100134382	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MPNHLVSQSFVAAMAKPRAPSWRARHADMTRMEFIGLVVGWSTAFVVVLALSVFTRFIG
Ga0209622_10308453	3300027502	Forest Soil	MRNHLVSQSGLRPAMATPRVPLLARDMTRIEFIIIAAGWSTALVVVLALSIFTRFIG
Ga0207862_10158371	3300027703	Tropical Forest Soil	MPNHLVSQPFVAAMPRPRAPSWRARDAHMTRQEFIGLVAGWSTALVVVLALSVFIRFIG
Ga0318538_105381622	3300031546	Soil	LNPGVSVRLSSFVTSSSLFHDASEEAEMPNHLVSQSFAAATARPRAPSWRARRADMSRMEFIGLVAGWSTAVVGVLALSVFIRFIG
Ga0318538_107872791	3300031546	Soil	MPNHLVSQPFVAAMPRPRAPSWRARDAEMSRLEFIGLVAGWSTAVVVVLALSVFIRFIG
Ga0318528_103401231	3300031561	Soil	MRSHRASQSFVAAMTAPPAPSWRARGADMTRKGFIGLVAGWCSALVLVLAVSAFIR
Ga0310915_106830972	3300031573	Soil	MPNRLVSQSFVATMARPRAPSWRARHADMTRMEFIGLVGGWSTALVVVLALSVFIRFIG
Ga0307474_100660052	3300031718	Hardwood Forest Soil	MRSHLISQPFGRHGHASRCARHADMTPREFIGLVAGWSTAVVVVLALSVFIQFLD
Ga0306917_102535271	3300031719	Soil	MRSHLVSQSFGRHGHASRRARHADMTPREFIGLVAGWSTALVVVLALLVFIRFVG
Ga0306917_104924873	3300031719	Soil	MPSCLASQSFVAAMAGPLAPSWRARNADMTRKVFIGLVAGWCSALVLILAVSAFIRFAG
Ga0318501_105180262	3300031736	Soil	MPNRLVSQSFVAATSRPRAPSWRARHADMTRLEFIGLVAGWSSALVAVLALS
Ga0306918_101217711	3300031744	Soil	FRDALEGAEMRSHLVSQSFGRHGHASRRARHADMTPREFIGLVAGWSTALVVVLALLVFIRFVG
Ga0306918_108672991	3300031744	Soil	SRFRGASKGAEMPNRLVSQSFVAATSRPRAPSWRARHADMTRMEFIGLVGGWSSALVAVLALSVFIRFIG
Ga0307477_111517111	3300031753	Hardwood Forest Soil	SSFVMSSSIFRDASEEAEMPNRLFSQSFAAATARPRAPSWRARHADMTRMEFIGLVAGWSTAVVVVLALSVFIQFLD
Ga0318535_103158871	3300031764	Soil	MSVSVFRDASEGAEMPNHLVSQPFVAAMPRPRAPSWRARDAEMSRLEFIGLVAGWSTALVVVLALSVFIRFIG
Ga0318529_105099971	3300031792	Soil	MSMSVSVFRDASEGAEMPNHLVSQPFVAAMPRPRAPSWRARDAHMTRQEFVGLVAGWSTGLVVVLALSVFIRFIG
Ga0310917_102005942	3300031833	Soil	MPNVLVSQSFAAATARPQAPSWRARHADMTRMEFIGLVAGWSTSVVVVLALSVFIRFIG
Ga0310917_108119821	3300031833	Soil	MPNRLVSQSFVAATSRPRAPSWRARHADTTRLEFIGLVAGWSSALVAVLAL
Ga0306919_101012364	3300031879	Soil	MPNVLVSQSFAAATARPKAPSWRAPHADMTRMEFIGLVAGWSTSVVVVLALSVFIRFIG
Ga0306919_101672984	3300031879	Soil	MPNHLVSQPFVAAMPRPRAPSWRARDAEMSRLEFIGLVVGWSTALVVVLALSVFIRFIG
Ga0306919_103972691	3300031879	Soil	MPNRLVSQSFVAAMARPRAPSWRARHADMTRMEFIGLVGGWSTALVVVFALSV
Ga0306925_102476162	3300031890	Soil	MPNRLVSQSFVAATSRPRAPSWRARHADMTRLEFIGLVAGWSSALVAVLALSVFIRFIG
Ga0306925_108531802	3300031890	Soil	MRSRLAPQSFVAAMAAPPPPSWRARNADMTRKGFIGLVAGWCSALVLILAVSAFIRFIG
Ga0306925_109996482	3300031890	Soil	MSPSLFRGAAKGAEMPNRLVSQSFVAAMARPRAPSWRARHADMTRMEFIGLVAGWSSALVAVLALSVFIRFIG
Ga0306925_117586591	3300031890	Soil	MPNRLVSQSFVAAMARPRAPSWRARHADMTRMEFIGLVGGWSTALVVVLALSVF
Ga0306921_104469691	3300031912	Soil	MRSHGASQSFVAAMTAPPAPSWRARGADMTRKGFIGLVAGWCSALVLVLAVSAFIRFVG
Ga0306921_109238122	3300031912	Soil	MPNRLVSQPFVAAMPRPRAPSWRARDAHMTRQEFVGLVAGWSTGLVVVLALSVFIRFIG
Ga0306921_117752161	3300031912	Soil	MPNHLVSQPFAAAMPRPRAPSWRARDADMTRLEFIGLVAGWSTALVVVLALSVFIRFIG
Ga0306921_123502021	3300031912	Soil	NPGAGIHLSSFAMSPSLFRGASKGAEMPNRLVSQSFVAAMARPRAPSWRARHADMTRMEFIGLVGGWSSALVAVLALSVFIRFIG
Ga0310916_104166581	3300031942	Soil	RFRDALEGAEMRSHLVSQSFGRHGHASRRARHADMTPREFIGLVAGWSTALVVVLALLVFIRFVG
Ga0310910_105092594	3300031946	Soil	PNHLVSQPFVAAMPRPRAPSWRARDAEMSRLEFIGLVAGWSTAVVVVLALSVFIRFIG
Ga0310909_102260612	3300031947	Soil	MSPSLFRGAAKGAEMPNRLVSQSFVAAMARPRAPSWRARHADMTRMEFIGLVAGWSTALVAVLALSVFIRFIG
Ga0306926_106186752	3300031954	Soil	MRNHQVSQSYVAAMAKPRAPSWRARHAAMTPREFIGLVAGWSTALVVVLALSVFTRFVG
Ga0306926_108320491	3300031954	Soil	EVVVAFPRRASEEAEMPNHLVSQSFAAATARPRAPSWRARRADMSRMEFIGLVAGWSTAVVGVLALSVFIRFIG
Ga0306926_112608181	3300031954	Soil	MPSRLASQSFVATMAGPLAPSWRARNADMTRKVFIGLVAGWCSALVLILAVSAFIRFAG
Ga0306926_116980791	3300031954	Soil	MSSLFGDALEGTEMRNQQVSQSFGRHAHASRRACHADMTSREFIGLVAGWSIALVVVLALSVFTRFIG
Ga0306922_111007291	3300032001	Soil	MPNHLVSQSFAAATARPRAPSWRARHADMSRMEFIGLVAGWSTAVVVLLALSLL
Ga0318559_102999182	3300032039	Soil	LNPGAGIHLSSFAMSPSLFRGASKGAEMPNRLVSQSFVAAMARPRAPSWRARHADMTRMEFIGLVAGWSSALVAVLALSVFIRFIG
Ga0318533_110370392	3300032059	Soil	QSFPAAMVAPLAPSWRARNADMTRKVFIGLAAGWCGALVLILAVSAFIRFAG
Ga0318514_102358913	3300032066	Soil	RLRAGVSVHLSSFAMSVSVFRDASEGAEMPNHLVSQPFVAAMPRPRAPSWRARDAEMSRLEFIGLVAGWSTALVVVLALSVFIRFIG
Ga0306924_118927151	3300032076	Soil	MPDHLVSQSFAAATARPRAPSWRARRADMSRMEFIGLVAGWSTAVVGVLA
Ga0318518_106616951	3300032090	Soil	MPNRLVSQSFVAATSRPRAPSWRARHAAMTPREFIGLVAGWSTALVVVLALSVFTRF
Ga0307472_1016103462	3300032205	Hardwood Forest Soil	MSSLFRDASEGAEMPNHLVSQSFVAAMAKPRAPSWRARHADMTRMEFIGLVAGWSTALVVVLALSVFTRFIG
Ga0306920_1005051654	3300032261	Soil	MSSLFGDALEGTEMRNHQVSQSFGRHAHASRRACHADMTSREFIGLVAGWSIALVVVLALSVFTRFIG
Ga0306920_1006435001	3300032261	Soil	MRSHRASQSFVAAMTAPPAPSWRARGADMTRKGFIGLVAGWCSALVLVLAVSAFIRFVG
Ga0306920_1015959552	3300032261	Soil	MPNRLVSQSFVAAMARPRAPSWRARHADMTRMEFIGLVAGWSSALVAVLALSVFIRFIG
Ga0306920_1023330081	3300032261	Soil	NPGVSVLLSSFVTSSSLFHDASEEAEMPNHLVSQSFAAATARPRAPSWRARHADMSRMEFIGLVAGWSTAVVVLLALSLLIRFIG
Ga0306920_1037090421	3300032261	Soil	AMSPSLFRDASKGAEMPNHLVSQSFVAATARPRAPSWRARHADMTRTEFVGLVAGWSTALMVVLALSVFIRFIG
Ga0310914_101075041	3300033289	Soil	MPNRLVSQSFVAATSRPRAPSWRARHADTTRLEFIGLVAGWSSALVAVLALSVFIRFIG
Ga0310914_101924945	3300033289	Soil	GAEMPNHLVSQPFVAAMPRPRAPSWRARDAEMSRLEFIGLVAGWSTALVVVLALSVFIRFIG
Ga0310914_109585812	3300033289	Soil	MPNRLVSQSFVAAMARPRAPSWRARHADMTRMEFIGLVGGWSTALVVVLA
Ga0310914_113579213	3300033289	Soil	LFRGAAKGAEMPNRLVSQSFVAAMARPRAPSWRARHADMTRMEFIGLVAGWSSALVAVLALSVFIRFIG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F059283

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences