Metagenome / Metatranscriptome Family F059201

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F059201
Family Type	Metagenome / Metatranscriptome
Number of Sequences	134
Average Sequence Length	46 residues
Representative Sequence	MTTRTLFFIFAFLLVVSLAHAGDERSIKDLAKALTGLASDVDPAEAQ
Number of Associated Samples	115
Number of Associated Scaffolds	134

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	91.79 %
% of genes near scaffold ends (potentially truncated)	97.01 %
% of genes from short scaffolds (< 2000 bps)	97.01 %
Associated GOLD sequencing projects	111
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.40

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (100.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (19.403 % of family members)
Environment Ontology (ENVO)	Unclassified (33.582 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (46.269 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 53.33% β-sheet: 0.00% Coil/Unstructured: 46.67%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.40
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.40
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 134 Family Scaffolds
PF10988	DUF2807	35.07
PF05872	HerA_C	0.75

COG ID	Name	Functional Category	% Frequency in 134 Family Scaffolds
COG0433	Archaeal DNA helicase HerA or a related bacterial ATPase, contains HAS-barrel and ATPase domains	Replication, recombination and repair [L]	0.75

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	41.79 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.75 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	41.79 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.75 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	27.61 %
Spartobacteria	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria	13.43 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.75 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	27.61 %
Chthoniobacterales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales	13.43 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.75 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	27.61 %
Chthoniobacteraceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae	13.43 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.75 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	27.61 %
Candidatus Udaeobacter	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter	13.43 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.75 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	27.61 %
Candidatus Udaeobacter copiosus	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	11.94 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.75 %
Unclassified	root	N/A	0.00 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_101916671	All Organisms → cellular organisms → Bacteria	723	Open in IMG/M
3300004479\|Ga0062595_102563393	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	510	Open in IMG/M
3300005187\|Ga0066675_10523913	All Organisms → cellular organisms → Bacteria	887	Open in IMG/M
3300005187\|Ga0066675_10609342	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	820	Open in IMG/M
3300005187\|Ga0066675_11456258	All Organisms → cellular organisms → Bacteria	500	Open in IMG/M
3300005332\|Ga0066388_100522147	All Organisms → cellular organisms → Bacteria	1821	Open in IMG/M
3300005332\|Ga0066388_106062664	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	610	Open in IMG/M
3300005344\|Ga0070661_101664719	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	540	Open in IMG/M
3300005354\|Ga0070675_102177277	All Organisms → cellular organisms → Bacteria	511	Open in IMG/M
3300005434\|Ga0070709_11410076	All Organisms → cellular organisms → Bacteria	564	Open in IMG/M
3300005435\|Ga0070714_102225107	All Organisms → cellular organisms → Bacteria	534	Open in IMG/M
3300005454\|Ga0066687_10040018	All Organisms → cellular organisms → Bacteria	2124	Open in IMG/M
3300005548\|Ga0070665_101672723	All Organisms → cellular organisms → Bacteria	644	Open in IMG/M
3300005587\|Ga0066654_10301110	All Organisms → cellular organisms → Bacteria	860	Open in IMG/M
3300005587\|Ga0066654_10839662	All Organisms → cellular organisms → Bacteria	524	Open in IMG/M
3300005616\|Ga0068852_102090452	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	588	Open in IMG/M
3300005617\|Ga0068859_101797505	All Organisms → cellular organisms → Bacteria	677	Open in IMG/M
3300005764\|Ga0066903_105882648	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	643	Open in IMG/M
3300005764\|Ga0066903_106530169	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	608	Open in IMG/M
3300006034\|Ga0066656_10865259	All Organisms → cellular organisms → Bacteria	579	Open in IMG/M
3300006175\|Ga0070712_101118985	All Organisms → cellular organisms → Bacteria	684	Open in IMG/M
3300006237\|Ga0097621_100436723	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1177	Open in IMG/M
3300006791\|Ga0066653_10601095	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	559	Open in IMG/M
3300006796\|Ga0066665_11394929	All Organisms → cellular organisms → Bacteria	542	Open in IMG/M
3300006881\|Ga0068865_101743459	All Organisms → cellular organisms → Bacteria	562	Open in IMG/M
3300007258\|Ga0099793_10335225	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	738	Open in IMG/M
3300009101\|Ga0105247_10249622	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1212	Open in IMG/M
3300009176\|Ga0105242_10766726	All Organisms → cellular organisms → Bacteria	951	Open in IMG/M
3300009545\|Ga0105237_12517958	All Organisms → cellular organisms → Bacteria	525	Open in IMG/M
3300009553\|Ga0105249_13045623	All Organisms → cellular organisms → Bacteria	538	Open in IMG/M
3300010042\|Ga0126314_10944874	All Organisms → cellular organisms → Bacteria	638	Open in IMG/M
3300010301\|Ga0134070_10294140	All Organisms → cellular organisms → Bacteria	618	Open in IMG/M
3300010304\|Ga0134088_10173663	All Organisms → cellular organisms → Bacteria	1029	Open in IMG/M
3300010321\|Ga0134067_10187885	All Organisms → cellular organisms → Bacteria	754	Open in IMG/M
3300010333\|Ga0134080_10232299	All Organisms → cellular organisms → Bacteria	808	Open in IMG/M
3300010362\|Ga0126377_10144813	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2226	Open in IMG/M
3300010362\|Ga0126377_10851459	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	972	Open in IMG/M
3300010366\|Ga0126379_11058989	All Organisms → cellular organisms → Bacteria	916	Open in IMG/M
3300010376\|Ga0126381_100788246	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1364	Open in IMG/M
3300010376\|Ga0126381_102231917	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	787	Open in IMG/M
3300010398\|Ga0126383_11366365	All Organisms → cellular organisms → Bacteria	798	Open in IMG/M
3300010399\|Ga0134127_12100189	All Organisms → cellular organisms → Bacteria	643	Open in IMG/M
3300010403\|Ga0134123_12025335	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	634	Open in IMG/M
3300012096\|Ga0137389_10784586	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	818	Open in IMG/M
3300012198\|Ga0137364_10419436	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter	1002	Open in IMG/M
3300012200\|Ga0137382_10930276	All Organisms → cellular organisms → Bacteria	626	Open in IMG/M
3300012208\|Ga0137376_11167699	All Organisms → cellular organisms → Bacteria	658	Open in IMG/M
3300012582\|Ga0137358_10057149	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	2606	Open in IMG/M
3300012685\|Ga0137397_10250638	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter	1319	Open in IMG/M
3300012882\|Ga0157304_1067289	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	589	Open in IMG/M
3300012884\|Ga0157300_1119291	All Organisms → cellular organisms → Bacteria	507	Open in IMG/M
3300012914\|Ga0157297_10434012	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	535	Open in IMG/M
3300012948\|Ga0126375_10444944	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	950	Open in IMG/M
3300012948\|Ga0126375_11070986	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	662	Open in IMG/M
3300012948\|Ga0126375_11483797	All Organisms → cellular organisms → Bacteria	579	Open in IMG/M
3300012948\|Ga0126375_11514014	All Organisms → cellular organisms → Bacteria	574	Open in IMG/M
3300012961\|Ga0164302_10698734	All Organisms → cellular organisms → Bacteria	751	Open in IMG/M
3300012971\|Ga0126369_13372028	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	523	Open in IMG/M
3300012984\|Ga0164309_11045245	All Organisms → cellular organisms → Bacteria	676	Open in IMG/M
3300012985\|Ga0164308_11839241	All Organisms → cellular organisms → Bacteria	564	Open in IMG/M
3300012985\|Ga0164308_11901157	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	555	Open in IMG/M
3300012985\|Ga0164308_11983273	All Organisms → cellular organisms → Bacteria	543	Open in IMG/M
3300012986\|Ga0164304_11475572	All Organisms → cellular organisms → Bacteria	561	Open in IMG/M
3300013296\|Ga0157374_12748382	All Organisms → cellular organisms → Bacteria	520	Open in IMG/M
3300014166\|Ga0134079_10597178	All Organisms → cellular organisms → Bacteria	548	Open in IMG/M
3300014745\|Ga0157377_11396978	All Organisms → cellular organisms → Bacteria	552	Open in IMG/M
3300014968\|Ga0157379_10690824	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	957	Open in IMG/M
3300014968\|Ga0157379_12287217	All Organisms → cellular organisms → Bacteria	538	Open in IMG/M
3300015077\|Ga0173483_10907079	All Organisms → cellular organisms → Bacteria	519	Open in IMG/M
3300015200\|Ga0173480_10081446	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	1530	Open in IMG/M
3300015356\|Ga0134073_10336772	All Organisms → cellular organisms → Bacteria	550	Open in IMG/M
3300015372\|Ga0132256_100517651	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	1304	Open in IMG/M
3300015372\|Ga0132256_101599602	All Organisms → cellular organisms → Bacteria	762	Open in IMG/M
3300015372\|Ga0132256_102028010	All Organisms → cellular organisms → Bacteria	681	Open in IMG/M
3300015374\|Ga0132255_100880973	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	1338	Open in IMG/M
3300016270\|Ga0182036_11693811	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	534	Open in IMG/M
3300016387\|Ga0182040_10244723	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	1344	Open in IMG/M
3300017657\|Ga0134074_1290504	All Organisms → cellular organisms → Bacteria	594	Open in IMG/M
3300018073\|Ga0184624_10293165	All Organisms → cellular organisms → Bacteria	729	Open in IMG/M
3300018078\|Ga0184612_10060847	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	1968	Open in IMG/M
3300018082\|Ga0184639_10546954	All Organisms → cellular organisms → Bacteria	576	Open in IMG/M
3300019872\|Ga0193754_1007568	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	1103	Open in IMG/M
3300019873\|Ga0193700_1006015	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	1879	Open in IMG/M
3300019877\|Ga0193722_1013351	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	2100	Open in IMG/M
3300019882\|Ga0193713_1151303	All Organisms → cellular organisms → Bacteria	622	Open in IMG/M
3300020001\|Ga0193731_1057158	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	1025	Open in IMG/M
3300020004\|Ga0193755_1213228	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	542	Open in IMG/M
3300021080\|Ga0210382_10197062	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	874	Open in IMG/M
3300021086\|Ga0179596_10612394	All Organisms → cellular organisms → Bacteria	552	Open in IMG/M
3300021560\|Ga0126371_13500860	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	530	Open in IMG/M
3300023058\|Ga0193714_1006658	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1811	Open in IMG/M
3300023064\|Ga0247801_1084734	All Organisms → cellular organisms → Bacteria	521	Open in IMG/M
3300024279\|Ga0247692_1023005	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	952	Open in IMG/M
3300024279\|Ga0247692_1028266	All Organisms → cellular organisms → Bacteria	861	Open in IMG/M
3300025290\|Ga0207673_1025672	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	807	Open in IMG/M
3300025898\|Ga0207692_10133240	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1406	Open in IMG/M
3300025900\|Ga0207710_10456301	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	660	Open in IMG/M
3300025901\|Ga0207688_10609767	All Organisms → cellular organisms → Bacteria	688	Open in IMG/M
3300025915\|Ga0207693_10806681	All Organisms → cellular organisms → Bacteria	723	Open in IMG/M
3300025925\|Ga0207650_11031450	All Organisms → cellular organisms → Bacteria	700	Open in IMG/M
3300025927\|Ga0207687_11341806	All Organisms → cellular organisms → Bacteria	615	Open in IMG/M
3300025930\|Ga0207701_11129923	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	648	Open in IMG/M
3300025938\|Ga0207704_10711859	All Organisms → cellular organisms → Bacteria	832	Open in IMG/M
3300025938\|Ga0207704_11517443	All Organisms → cellular organisms → Bacteria	575	Open in IMG/M
3300025961\|Ga0207712_11019688	All Organisms → cellular organisms → Bacteria	735	Open in IMG/M
3300025981\|Ga0207640_10937401	All Organisms → cellular organisms → Bacteria	758	Open in IMG/M
3300025986\|Ga0207658_11112870	All Organisms → cellular organisms → Bacteria	722	Open in IMG/M
3300026075\|Ga0207708_10718220	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	855	Open in IMG/M
3300026078\|Ga0207702_11916959	All Organisms → cellular organisms → Bacteria	584	Open in IMG/M
3300026316\|Ga0209155_1258735	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	539	Open in IMG/M
3300026323\|Ga0209472_1148880	All Organisms → cellular organisms → Bacteria	880	Open in IMG/M
3300026329\|Ga0209375_1270682	All Organisms → cellular organisms → Bacteria	560	Open in IMG/M
3300026330\|Ga0209473_1266750	All Organisms → cellular organisms → Bacteria	581	Open in IMG/M
3300026523\|Ga0209808_1102146	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1208	Open in IMG/M
3300027882\|Ga0209590_10075247	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1955	Open in IMG/M
3300028065\|Ga0247685_1016463	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	875	Open in IMG/M
3300028755\|Ga0307316_10312451	All Organisms → cellular organisms → Bacteria	576	Open in IMG/M
3300028796\|Ga0307287_10101679	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1085	Open in IMG/M
3300028819\|Ga0307296_10375083	All Organisms → cellular organisms → Bacteria	777	Open in IMG/M
3300030916\|Ga0075386_10036529	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1096	Open in IMG/M
3300031226\|Ga0307497_10179630	All Organisms → cellular organisms → Bacteria	902	Open in IMG/M
3300031231\|Ga0170824_105186105	All Organisms → cellular organisms → Bacteria	864	Open in IMG/M
3300031231\|Ga0170824_113773009	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1139	Open in IMG/M
3300031716\|Ga0310813_10416267	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1159	Open in IMG/M
3300031716\|Ga0310813_10734661	All Organisms → cellular organisms → Bacteria	884	Open in IMG/M
3300031720\|Ga0307469_12528235	All Organisms → cellular organisms → Bacteria	502	Open in IMG/M
3300031847\|Ga0310907_10492456	All Organisms → cellular organisms → Bacteria	654	Open in IMG/M
3300031942\|Ga0310916_10859344	All Organisms → cellular organisms → Bacteria	762	Open in IMG/M
3300031947\|Ga0310909_11095296	All Organisms → cellular organisms → Bacteria	647	Open in IMG/M
3300032017\|Ga0310899_10445764	All Organisms → cellular organisms → Bacteria	628	Open in IMG/M
3300032035\|Ga0310911_10309182	All Organisms → cellular organisms → Bacteria	910	Open in IMG/M
3300032211\|Ga0310896_10360485	All Organisms → cellular organisms → Bacteria	767	Open in IMG/M
3300033412\|Ga0310810_10507760	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1196	Open in IMG/M
3300033475\|Ga0310811_10279046	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1947	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	77.61%
Host-Associated	Host-Associated	22.39%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	74.63%
Plants	Host-Associated → Plants	22.39%
Aquatic	Environmental → Aquatic	2.99%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	74.63%
Rhizosphere	Host-Associated → Plants → Rhizosphere	14.18%
Rhizoplane	Host-Associated → Plants → Rhizoplane	7.46%
Sediment	Environmental → Aquatic → Sediment	2.24%
Freshwater	Environmental → Aquatic → Freshwater	0.75%
Roots	Host-Associated → Plants → Roots	0.75%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	66.42%
Loam	Environmental → Terrestrial → Soil → Loam	8.21%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	8.21%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	6.72%
Soil	Host-Associated → Plants → Rhizosphere → Soil	5.97%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.24%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.75%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.75%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.75%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	42.54%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	11.19%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	8.96%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	8.21%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	6.72%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	5.97%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.48%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.99%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.24%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.24%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.49%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.75%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.75%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.75%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.75%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	19.40%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	10.45%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	8.96%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	6.72%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	5.22%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.22%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.73%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.99%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.99%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.24%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.24%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.24%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.24%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.24%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	2.24%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.49%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.49%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.49%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	1.49%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.49%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.49%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.49%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.75%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.75%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.75%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.75%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.75%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.75%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.75%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.75%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.75%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.75%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.75%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.75%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005587	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103	Environmental	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015	Environmental	Open in IMG/M
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental	Open in IMG/M
3300010321	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09212015	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012882	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2	Environmental	Open in IMG/M
3300012884	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2	Environmental	Open in IMG/M
3300012914	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S028-104C-2	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300014166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015	Environmental	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)	Environmental	Open in IMG/M
3300015200	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2)	Environmental	Open in IMG/M
3300015356	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300017657	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09212015	Environmental	Open in IMG/M
3300018073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1	Environmental	Open in IMG/M
3300018078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_coex	Environmental	Open in IMG/M
3300018082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b2	Environmental	Open in IMG/M
3300019872	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1a1	Environmental	Open in IMG/M
3300019873	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3s1	Environmental	Open in IMG/M
3300019877	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m1	Environmental	Open in IMG/M
3300019882	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3a2	Environmental	Open in IMG/M
3300020001	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1a2	Environmental	Open in IMG/M
3300020004	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1a2	Environmental	Open in IMG/M
3300021080	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo	Environmental	Open in IMG/M
3300021086	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300023058	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2m1	Environmental	Open in IMG/M
3300023064	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S001-104B-6	Environmental	Open in IMG/M
3300024279	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK33	Environmental	Open in IMG/M
3300025290	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with spike-in - S5	Host-Associated	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025900	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026316	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122 (SPAdes)	Environmental	Open in IMG/M
3300026323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130 (SPAdes)	Environmental	Open in IMG/M
3300026329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131 (SPAdes)	Environmental	Open in IMG/M
3300026330	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133 (SPAdes)	Environmental	Open in IMG/M
3300026523	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157 (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300028065	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK26	Environmental	Open in IMG/M
3300028755	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_356	Environmental	Open in IMG/M
3300028796	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_141	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300030916	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA12 EcM (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031847	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D4	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300032017	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D4	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032211	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D1	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M
3300033475	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1019166711	3300000364	Soil	MIRRLFFIFAFLLLVSLAHASDEKSIKDLAKALTRLSPDVDPAE
Ga0062595_1025633932	3300004479	Soil	MVRGVFFIFVLLLVVHTATAGDERSIKDLAKALTKLAADV
Ga0066675_105239133	3300005187	Soil	MTTHTLFFIFAFQLVVSLAPAGDERSIKDLAKALTGLASDVDP
Ga0066675_106093422	3300005187	Soil	MRTVTFAFLFLLLVHAATAGDERSIKDLANALTRLSSDVDPAEAQSLSAT
Ga0066675_114562582	3300005187	Soil	MTTRTLFFIFAFQLVVSLAPAGDERSIKDLAKALTGLASDVDP
Ga0066388_1005221473	3300005332	Tropical Forest Soil	MTTRTPFFIFAFLLAFSLAQAGDERSIKDLAKALTQLGADVDP
Ga0066388_1060626641	3300005332	Tropical Forest Soil	VRNAEGLRRYMRIRALFFIFTSLLVVSLAHAGDERSIKDLAKALTGLGPDV
Ga0070661_1016647192	3300005344	Corn Rhizosphere	MITRRFLFVFAFLLVVSLANAGDERSIKNLAKALTGLSSDVDPAEAQ
Ga0070675_1021772771	3300005354	Miscanthus Rhizosphere	MRTLLFIFAFQLVVSLATAGDERSIKELAKALTGLSSDVDPAEAQAISYTAHTTAR
Ga0070709_114100762	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MIKRILPLIFGFLVVVSLAHASDERSIKDLAKALTGLSSDVDPAEAQ
Ga0070714_1022251071	3300005435	Agricultural Soil	MTTRTLFFIFAFQLAVSLAPAGDERSIKELAKALTGLSSDVDPAEAQALSY
Ga0066687_100400183	3300005454	Soil	MMRRVFFIFALLLVIHTATASDERSIKDLAKALTALARDVDPAE
Ga0070665_1016727231	3300005548	Switchgrass Rhizosphere	MTTRTVFFVFAFLVVVSLAHAGDERSIKDLAKALTGLSADVDPAEAQALSYTAHT
Ga0066654_103011102	3300005587	Soil	MMRRVFFIFALLLVVHTATASDERSIKDLAKALTALARDVDPAEAQALSA
Ga0066654_108396621	3300005587	Soil	MIKRTLLFVFAFLLVVSLAHGSDERSIRDLAKALTGLSADVDPAEAQALSYTAHTTA
Ga0068852_1020904522	3300005616	Corn Rhizosphere	MTTRTLCFVFASLLVVNLADASDERSIKDLAKALTGLSSDVDPAEAQALSYT
Ga0068859_1017975052	3300005617	Switchgrass Rhizosphere	MIKRTLLLVFGFLLVVSLAHGSDERSIKDLAKALTGLSSDVDPAEAQ
Ga0066903_1058826481	3300005764	Tropical Forest Soil	MTTRTLFSILAFLLIVSLAHASDERSIKDLAKALTQL
Ga0066903_1065301691	3300005764	Tropical Forest Soil	MTMRTLVFVFAFLLVASLAQAGDERSIKNLAKALAGLSSDVDPAEAQAISYTAHTTA
Ga0066656_108652591	3300006034	Soil	MTTRTLFFVFAFLLVVSLAHASDERSIKDLAKALTGLSSDVDP
Ga0070712_1011189851	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MIKRILPLIFAFLVVVSLAHASDERSIKDLAKALTGLS
Ga0097621_1004367233	3300006237	Miscanthus Rhizosphere	MTRRTLVFIFAFLLGISLAHASDERSIKDLAKALTGLSSDVDPAEAQALSYTA
Ga0066653_106010951	3300006791	Soil	MMRTSSFIIAFLFLAHVATASDERSIKELTKALVALASDVDPAEAQSLSVTA
Ga0066665_113949291	3300006796	Soil	MTTRTLFFIFAFLLVVSLAHAGDERSIKDLAKALT
Ga0068865_1017434592	3300006881	Miscanthus Rhizosphere	MTRRTLVFIFAFLLGISLAHASDERSIKDLAKALTGLSSD
Ga0099793_103352251	3300007258	Vadose Zone Soil	MRTSAFIFAFLLVIHAATAGDERSIKDLTKALSALATDVDPGEA
Ga0105247_102496222	3300009101	Switchgrass Rhizosphere	MTRRTLLFGFAFLLVVSLANAGDERSIKNLAKALTGLSSDVDPAEA*
Ga0105242_107667261	3300009176	Miscanthus Rhizosphere	MTRRTLVFIFAFLLGISLAHASDERSIKDLAKALTGL
Ga0105237_125179581	3300009545	Corn Rhizosphere	MTRRTLVFIFAFLLGISLAHASDERSIKDLAKALTGLSSDVDPAEAQAISYTAHTT
Ga0105249_130456231	3300009553	Switchgrass Rhizosphere	MTTRTLFFIFGSLLVVNLAHAGDKTSIKTLAKALTGLASDVDPAEAQAIS
Ga0126314_109448741	3300010042	Serpentine Soil	MTTRILFFVFASLIVVSLADAGDERSIKDLAKALT
Ga0134070_102941401	3300010301	Grasslands Soil	MTTRTLFFIFAFQLVVSLAYAGDERSIKDLAKALTGLSSDVDPA
Ga0134088_101736631	3300010304	Grasslands Soil	MRRVFFIFALLLVIHTARATDERSIKDLAKALTALAHDVDPAEAQALSATA
Ga0134067_101878851	3300010321	Grasslands Soil	MTTRTLFFIFAFMLVVNLAHASDERSIKELAKALTGLSSDVDPAEAQA
Ga0134080_102322993	3300010333	Grasslands Soil	MTTRTLFFIFAFQLVVSLAYAGDERSIKDLTKALTG
Ga0126377_101448131	3300010362	Tropical Forest Soil	MRIRTLLFVFAFLLVVSLANAGDERSIKNLAKALAGLSSD
Ga0126377_108514591	3300010362	Tropical Forest Soil	MTTRTLFSILVFLLIISLAHASDERSIKDLAKALTQLSSNVDPAEAQAL
Ga0126379_110589891	3300010366	Tropical Forest Soil	MTTRTLFFVFAFLLVVSLANASDERSIKNLAKALTGLS
Ga0126381_1007882461	3300010376	Tropical Forest Soil	MRSLSLIFSFLLVVSLAHASDERSIKDLSKALTELASDVDPAEA
Ga0126381_1022319172	3300010376	Tropical Forest Soil	MRTLVFIFAFPLVVSLANAGDERSIKNLAKALTGLSSDVD
Ga0126383_113663652	3300010398	Tropical Forest Soil	MTTRRLFCIFAFLLVVSLAHAGDERSIKDLAKALTRLASDVDPAE
Ga0134127_121001892	3300010399	Terrestrial Soil	MIKRTLLLVFGFLLVVSLVHGSDERSIKDLAKALTGLSS
Ga0134123_120253352	3300010403	Terrestrial Soil	MITRRFLFVFAFLLVVSLANAGDERSIKNLAKALTGLSSDV
Ga0137389_107845862	3300012096	Vadose Zone Soil	MTTRTLFFIFAFQLVVSLAPAGDERSIKDLAKALTGLSSDVDPAEAQALSYTAHTT
Ga0137364_104194363	3300012198	Vadose Zone Soil	MTTRTLFFVFAFLLVVSLANAGDERSIKNLAKALTGLAADV
Ga0137382_109302762	3300012200	Vadose Zone Soil	MTTRTLFFVFAFLLVVSLANAGDERSIKNLAKALTGLAADVDP
Ga0137376_111676992	3300012208	Vadose Zone Soil	MTTRTLFFIFAFMLVVNLAHASDERSIKELAKALTGLSSDVDPAEAQAVSY
Ga0137358_100571491	3300012582	Vadose Zone Soil	MTTRTLFFIFAFQLVVSLAPAGDERSIKDLAKALTGLAADVDPAEAQAL
Ga0137397_102506381	3300012685	Vadose Zone Soil	MTTRTLFFIFAFQLVVSLAPAGDERSIKDLAKALTGLSSDVDPAEAQALSYT
Ga0157304_10672892	3300012882	Soil	MTTRTLLFVFAFLLVVSLAHAGDERSIKNLAKALTGLSSDVDPAEAQALSYTAHTT
Ga0157300_11192911	3300012884	Soil	MIKRTLLLVFGFLLVVSLAHGGDERSIKDLAKALTGLSSDVDPAEAQA
Ga0157297_104340121	3300012914	Soil	MIKRTLLLVFGFLLVVSLAHGGDERSIKDLAKALTGLSSDVDPAEAQALSYTAHTTA
Ga0126375_104449443	3300012948	Tropical Forest Soil	MTRRVPFFIFAFLLAFSLAHAGDERSIKDLAKALT
Ga0126375_110709861	3300012948	Tropical Forest Soil	MRTRALFSISAFLLVVSLAHASDERSIKGLAKALTGLSS
Ga0126375_114837972	3300012948	Tropical Forest Soil	MRSLSLIFSFLLVVSLAHASDERSIKDLSKALTELASDVDPAEAEALS
Ga0126375_115140141	3300012948	Tropical Forest Soil	MTTRRLFCIFAFLLVVSLAHAGDERSIKDLAKALTRL
Ga0164302_106987342	3300012961	Soil	MTTRTLFFVFAFLFVVSLAHASDERSIKDLAKALTGLSA
Ga0126369_133720282	3300012971	Tropical Forest Soil	MTTRGLSFVLAFLLLVSRAHAGDERSIKDLAKALT
Ga0164309_110452452	3300012984	Soil	MTTRSLFFIFAFLLVVSLANASDERSIKDLAKALTGLSSDVDPAEAQAISYTA
Ga0164308_118392412	3300012985	Soil	MTTRTLFFVFAFLVVVSLAHAGDERSIKDLAKALTGLSADVDP
Ga0164308_119011572	3300012985	Soil	MTTRTVFFVFAFLVVVSLAHAGDERSIKDLAKALTGLS
Ga0164308_119832732	3300012985	Soil	MIKRTLLLVFGFLLVVSLSRGSDERSIKDLAKALTGLSSDVDPAEAQALSYTAH
Ga0164304_114755722	3300012986	Soil	MTTRTLFFVFAFLIVVSLAHAGDERSIKDLAKALTGLSADVDP
Ga0157374_127483822	3300013296	Miscanthus Rhizosphere	MTTRTVFFVFAFLVVVSLAHAGDERSIKDLAKALTGLSADVDPAEAQALS*
Ga0134079_105971782	3300014166	Grasslands Soil	MTKRTLFSIFAFLLVVSLAHASDERSIKDLAKALTGLSSDVDPAEAQALSYTA
Ga0157377_113969782	3300014745	Miscanthus Rhizosphere	MTRRTLLFGFAFLLVVSLANAGDERSIKNLAKALTGLSSDVDPAEA
Ga0157379_106908241	3300014968	Switchgrass Rhizosphere	MTTRTLCFIFASLLVVNLTDASHERSIKDLAKALTGLSSDVDPA
Ga0157379_122872171	3300014968	Switchgrass Rhizosphere	MITRTLFSIFASLLVVSLAHAGDERSIKDLAKALTGLSSDVDPAEAQAISYTAHTTA
Ga0173483_109070792	3300015077	Soil	MTTRTLFFIFASLLVVSPAHASDERSIKDLAKALTGLSADVDPAEAQALSY
Ga0173480_100814461	3300015200	Soil	MIKRTLLFIFAFLLVISLARASDERSIKELAKALTGLSS
Ga0134073_103367721	3300015356	Grasslands Soil	MTTRTLFFIFAFLLVVSLAHAGDERSIKDLAKALTGLASDVDPAEAQ
Ga0132256_1005176511	3300015372	Arabidopsis Rhizosphere	MRIRKFFLIFASLLVVSLANAGDERSIKDLAKALTGLGRDVD
Ga0132256_1015996021	3300015372	Arabidopsis Rhizosphere	MITRALFFVFAFLLVVTLAHASDERSIKDLAKALTGLSSD
Ga0132256_1020280102	3300015372	Arabidopsis Rhizosphere	MIKRTLLLVFGFLLVVSLAHGSDERSIKDLAKALTGLSSDVDP
Ga0132255_1008809731	3300015374	Arabidopsis Rhizosphere	MTTRTLFSILVFPLIVSLAHASDERSIKDLAKALTQLSSNVDPAEAQ
Ga0182036_116938111	3300016270	Soil	MRIRAFFLLFASLLVVSLANAGDERSIKDLAKALTGLGPDVD
Ga0182040_102447233	3300016387	Soil	MTTRTLFSILAFLLIVSLAHASDERSIKDLAKALTQLSSNVDPAEAQALSYTAHT
Ga0134074_12905041	3300017657	Grasslands Soil	MTTRTLFFIFAFQLVVSLAYAGDERSIKDLAKALTGLSSDVDPAEAQAL
Ga0184624_102931651	3300018073	Groundwater Sediment	MTTRTLFFIFAFQLVVSLAPAGDERSIKDLAKTLTGLASDVDPTEAQ
Ga0184612_100608475	3300018078	Groundwater Sediment	MTTRTLFFVFALLVVSLAHAGDERSIKDLAKALTGLASDVDPTEAQALS
Ga0184639_105469541	3300018082	Groundwater Sediment	MTTRTLFFVFAFLLLVSLAHASDERSIKDLAKALTGLS
Ga0193754_10075683	3300019872	Soil	MTTRTLFFIFAFQLVVSLAPAGDERSIKDLAKALTGLASDVDPAEAQ
Ga0193700_10060154	3300019873	Soil	MRTSSFIIAFLFLIHAATAGDERSIKDLSKALTGLAADVDPAEAQSLSITAH
Ga0193722_10133511	3300019877	Soil	MTTRTFPFIFAFLLVVSLAHASDERSIKDLAKALTGLSSDVDPAEAQAL
Ga0193713_11513031	3300019882	Soil	MTTRTLFFIFAFLLVVSLANAGDERSIKNLAKALTGLAADVDPAEAQA
Ga0193731_10571583	3300020001	Soil	MTTRTLFFIFAFQLVVSLAPAGDERSIKDLAKALTGLASDVDPTEAQALSYTAHTT
Ga0193755_12132282	3300020004	Soil	MIRRLFFIFALLLLVSPAKAGDERSIKDLAKALVALGRDVDPA
Ga0210382_101970623	3300021080	Groundwater Sediment	MTTRTLFFIFAFQLVVSLAPAGDERSIKELAKALTGLASD
Ga0179596_106123942	3300021086	Vadose Zone Soil	MTTRALFFVFAFLLVVSLAHASDERSIKDLAKALT
Ga0126371_135008602	3300021560	Tropical Forest Soil	MTTRTLFSILAFLLIVSLAHASDERSIKDLAKALTQLSSNVDPAEAQALSYTAHTTAR
Ga0193714_10066584	3300023058	Soil	MQKPDKMTKRTLLFVFALLVVSLAHGSDERSINNLAKALTGLSSDVDPA
Ga0247801_10847342	3300023064	Soil	MIKRTLLLVFGFLLVVSLSRGSDERSIKDLAKALTGLS
Ga0247692_10230052	3300024279	Soil	MITRRFLFVFAFLLVVSLANAGDERSIKNLAKALTGLSSDVDPAEAQAISYTAHTT
Ga0247692_10282661	3300024279	Soil	MITRRFLFVFAFLLVVSLANAGDERSIKNLAKALT
Ga0207673_10256722	3300025290	Corn, Switchgrass And Miscanthus Rhizosphere	MITRRFLFVFAFLLVVSLANASDERSIKNLAKALTGLSSDVDPAEAQAISYT
Ga0207692_101332401	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MIKRILPLIFAFLVVVSLAHASDERSIKDLAKALTGLSS
Ga0207710_104563011	3300025900	Switchgrass Rhizosphere	MTRRTLLFGFAFLLVVSLANAGDERSIKNLAKALTGLSSDVDP
Ga0207688_106097672	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	MTRRTLLFGFAFLLVVSLANAGDERSIKNLAKALTGLSSDVDPAEAQAISYTAHT
Ga0207693_108066812	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MIKRILPLIFAFLVVVSLAHASDERSIKDLAKALTGLSSDVDPAEAQALSYTAHTTA
Ga0207650_110314501	3300025925	Switchgrass Rhizosphere	MTTRTLFFVFAFLVVVSLAHAGDERSIKDLAKALTGLSAD
Ga0207687_113418061	3300025927	Miscanthus Rhizosphere	MIKRTLLLVFGFLLVVSLAHGSDERSIKDLAKALTALSSDVD
Ga0207701_111299232	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	MTTRTLFFVYAFLLGISLAHAGDERSIKNLAKALTGLSSDVDPAEAQAISYTAHT
Ga0207704_107118591	3300025938	Miscanthus Rhizosphere	MRSMITRTLPFVFAFLLVVSLAHAGDERSIKDLAKALTGLSSDVDPAEA
Ga0207704_115174431	3300025938	Miscanthus Rhizosphere	MIKRTLLLVFGFLLVVSLAHGSDERSIKDLAKALTALSSDVDPAEA
Ga0207712_110196882	3300025961	Switchgrass Rhizosphere	MTTRTLLFVFAFLLVVSLAHASDERSIKDLAKALTGLSSDVDPAEAQ
Ga0207640_109374011	3300025981	Corn Rhizosphere	MIKRTLLLVFGFLLVVSLAHGSDERSIKDLAKALTGLSSDVDPAEAQALSY
Ga0207658_111128702	3300025986	Switchgrass Rhizosphere	MTTRTLLFVFAFLLVVSLAHASDERSIKDLAKALTGLSSDVDPAEAQAIS
Ga0207708_107182201	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	MTTRTLCFVFASLLVVNLADASDERSIKDLAKALTGLS
Ga0207702_119169591	3300026078	Corn Rhizosphere	MIKRTLLLVFGFLLVVSLAHGSDERSIKDLAKALTGLSSDVDPAEAQALSYT
Ga0209155_12587352	3300026316	Soil	MRTVTFAFLFLLLVHAATASDERSIKDLANALTRLSSDVDPAEAQSLSV
Ga0209472_11488801	3300026323	Soil	MRRVFFIFALLLVVHTARATDERSIKDLTKALTALAHDVDPAEAQALSATAHTK
Ga0209375_12706821	3300026329	Soil	MTTRTLFFVFAFLLVVSLANAGDERSIKNLAKALTGLAAD
Ga0209473_12667501	3300026330	Soil	MTTRTLFFIFAFQLVVSLAHAGDERSIKDLAKALTGLSSDVDPAEAQAL
Ga0209808_11021463	3300026523	Soil	MTKRTLFSIFAFLLVVSLAQASDERSIKDLAKALTGLSSDVDPAE
Ga0209590_100752471	3300027882	Vadose Zone Soil	MTTRTLFFIFAFQLVVSLAYAGDERSIKDLTKALTGLSSDVDPTEAQ
Ga0247685_10164632	3300028065	Soil	MTTRTLLFVFAFLLVVSLANAGDERSIKNLAKALTGLSSDVDPAEAQAISYTAHTTA
Ga0307316_103124512	3300028755	Soil	MTTRTLLFIFAFLLVVSLAHASDERSIKDLAKALTGLSSD
Ga0307287_101016794	3300028796	Soil	MTTRTLFFIFAFQLVVSLAPAGDERSIKDLAKALTGLASDVDPT
Ga0307296_103750832	3300028819	Soil	MTTRTLLFIFAFLLVVSLAHASDERSIKDLAKALTGLSSDVDPAEAQALSYTAHTTAR
Ga0075386_100365293	3300030916	Soil	MTTRTLFFVFAFLLVVSLAHASDERSIKDLAKALTGLSAD
Ga0307497_101796301	3300031226	Soil	MTTRSLFFIFAFLIVVSLANASDERSIKDLAKALTGLSSDVDPAEAQALSYTAHTTAR
Ga0170824_1051861053	3300031231	Forest Soil	MIKRTLLLVFAFLVVVSLAHASDERSIKDLAKALTGLSSDVDP
Ga0170824_1137730093	3300031231	Forest Soil	MIKRTLLLVFAFLIVVSLEHASDERSIKDLAKALTG
Ga0310813_104162673	3300031716	Soil	MTRRTLLFGFAFLLVVSLANAGDERSIKNLAKALTGLSS
Ga0310813_107346613	3300031716	Soil	MTTRTLFFVFAFLLVVSLVNAGDERSIKGLAKALTGLASDV
Ga0307469_125282351	3300031720	Hardwood Forest Soil	MTTRTLLFIFAFLLVASLAHASDERSIKDLAKALTGLSSDVDPAEAQALSYTAHT
Ga0310907_104924562	3300031847	Soil	MTTRTLFFVFAFLLVVSLAHAGDERSINNLAKALTKLSSDVDPAEAQALS
Ga0310916_108593442	3300031942	Soil	MTTRTLFFIFAFLLVVSLAHASDERSIKDLSKALTALASDVDPT
Ga0310909_110952962	3300031947	Soil	MTTRTLFFIFAFLLVVSLAHASDERSIKDLSKALTALASDVDPTEA
Ga0310899_104457642	3300032017	Soil	MTTRTLFFVFAFLLVISLAHAGDERSIKNLAKALTGLSSDVDPAEAQA
Ga0310911_103091823	3300032035	Soil	MTARALFFIVASLLVARLAHAGDERSIKDLAKALTQLGADVDPAEAQAISY
Ga0310896_103604852	3300032211	Soil	MTTRTLFFVFAFLLVVSLAHAGDERSINNLAKALTKLSSDV
Ga0310810_105077601	3300033412	Soil	MTKRTLLFVFAFLVVVSLTHASDERSIKDLAKALTGLSSDVDPAEAQA
Ga0310811_102790463	3300033475	Soil	MIMRRFLFFFAFLLVASLAKAGDERSIKNLTKALTGLSSDVDPAEAEAISYTAHT

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F059201

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences