NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F059169

Metagenome / Metatranscriptome Family F059169

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F059169
Family Type Metagenome / Metatranscriptome
Number of Sequences 134
Average Sequence Length 55 residues
Representative Sequence MTFRIETAARGRFAVFILSGRIEKQAIAELRRLFELQSDYRDIVLDLKDVG
Number of Associated Samples 101
Number of Associated Scaffolds 134

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 33.58 %
% of genes near scaffold ends (potentially truncated) 88.06 %
% of genes from short scaffolds (< 2000 bps) 88.06 %
Associated GOLD sequencing projects 95
AlphaFold2 3D model prediction Yes
3D model pTM-score0.55

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (90.299 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil
(23.134 % of family members)
Environment Ontology (ENVO) Unclassified
(33.582 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(45.522 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 22.78%    β-sheet: 31.65%    Coil/Unstructured: 45.57%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.55
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 134 Family Scaffolds
PF02954HTH_8 44.03
PF08447PAS_3 4.48
PF13185GAF_2 3.73
PF08281Sigma70_r4_2 2.99
PF00158Sigma54_activat 2.99
PF12697Abhydrolase_6 2.24
PF07681DoxX 1.49
PF00486Trans_reg_C 1.49
PF08240ADH_N 1.49
PF07366SnoaL 1.49
PF00989PAS 0.75
PF00190Cupin_1 0.75
PF05368NmrA 0.75
PF14417MEDS 0.75
PF00903Glyoxalase 0.75
PF08448PAS_4 0.75
PF12681Glyoxalase_2 0.75
PF13683rve_3 0.75
PF02738MoCoBD_1 0.75
PF00561Abhydrolase_1 0.75

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 134 Family Scaffolds
COG2259Uncharacterized membrane protein YphA, DoxX/SURF4 familyFunction unknown [S] 1.49
COG4270Uncharacterized membrane proteinFunction unknown [S] 1.49

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms90.30 %
UnclassifiedrootN/A9.70 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300001180|JGI12695J13573_1004374All Organisms → cellular organisms → Bacteria950Open in IMG/M
3300001471|JGI12712J15308_10081775All Organisms → cellular organisms → Bacteria818Open in IMG/M
3300002245|JGIcombinedJ26739_100887266All Organisms → cellular organisms → Bacteria774Open in IMG/M
3300002917|JGI25616J43925_10021509All Organisms → cellular organisms → Bacteria2862Open in IMG/M
3300003505|JGIcombinedJ51221_10201108All Organisms → cellular organisms → Bacteria809Open in IMG/M
3300005445|Ga0070708_101770679All Organisms → cellular organisms → Bacteria574Open in IMG/M
3300005471|Ga0070698_101080571All Organisms → cellular organisms → Bacteria751Open in IMG/M
3300005541|Ga0070733_10544049All Organisms → cellular organisms → Bacteria778Open in IMG/M
3300005591|Ga0070761_10007248All Organisms → cellular organisms → Bacteria6358Open in IMG/M
3300005610|Ga0070763_10132547All Organisms → cellular organisms → Bacteria1287Open in IMG/M
3300005610|Ga0070763_10225682All Organisms → cellular organisms → Bacteria1007Open in IMG/M
3300005610|Ga0070763_10262389Not Available939Open in IMG/M
3300005712|Ga0070764_10819422All Organisms → cellular organisms → Bacteria579Open in IMG/M
3300005843|Ga0068860_100227512All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1812Open in IMG/M
3300006176|Ga0070765_100122611All Organisms → cellular organisms → Bacteria2281Open in IMG/M
3300006176|Ga0070765_101797972Not Available575Open in IMG/M
3300006854|Ga0075425_101248032All Organisms → cellular organisms → Bacteria843Open in IMG/M
3300006893|Ga0073928_10036500All Organisms → cellular organisms → Bacteria4618Open in IMG/M
3300006893|Ga0073928_10825592All Organisms → cellular organisms → Bacteria → Acidobacteria639Open in IMG/M
3300007076|Ga0075435_101193890All Organisms → cellular organisms → Bacteria666Open in IMG/M
3300007258|Ga0099793_10418498All Organisms → cellular organisms → Bacteria660Open in IMG/M
3300007265|Ga0099794_10348131All Organisms → cellular organisms → Bacteria771Open in IMG/M
3300009038|Ga0099829_10920382All Organisms → cellular organisms → Bacteria725Open in IMG/M
3300009088|Ga0099830_11206772All Organisms → cellular organisms → Bacteria628Open in IMG/M
3300009090|Ga0099827_11375885All Organisms → cellular organisms → Bacteria614Open in IMG/M
3300009162|Ga0075423_11242535All Organisms → cellular organisms → Bacteria795Open in IMG/M
3300010159|Ga0099796_10222118All Organisms → cellular organisms → Bacteria775Open in IMG/M
3300010375|Ga0105239_13267833All Organisms → cellular organisms → Bacteria528Open in IMG/M
3300011271|Ga0137393_10814735All Organisms → cellular organisms → Bacteria798Open in IMG/M
3300011271|Ga0137393_10983388All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae719Open in IMG/M
3300011271|Ga0137393_11440391Not Available578Open in IMG/M
3300011429|Ga0137455_1050392All Organisms → cellular organisms → Bacteria1175Open in IMG/M
3300012039|Ga0137421_1022882All Organisms → cellular organisms → Bacteria → Acidobacteria1549Open in IMG/M
3300012161|Ga0137336_1068414All Organisms → cellular organisms → Bacteria659Open in IMG/M
3300012169|Ga0153990_1059381All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4867Open in IMG/M
3300012169|Ga0153990_1155688All Organisms → cellular organisms → Bacteria → Acidobacteria509Open in IMG/M
3300012202|Ga0137363_11066198All Organisms → cellular organisms → Bacteria687Open in IMG/M
3300012202|Ga0137363_11307234All Organisms → cellular organisms → Bacteria → Acidobacteria614Open in IMG/M
3300012202|Ga0137363_11819375All Organisms → cellular organisms → Bacteria → Acidobacteria502Open in IMG/M
3300012203|Ga0137399_10033487All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria3569Open in IMG/M
3300012203|Ga0137399_10407072All Organisms → cellular organisms → Bacteria1135Open in IMG/M
3300012205|Ga0137362_11464387Not Available569Open in IMG/M
3300012361|Ga0137360_10607825All Organisms → cellular organisms → Bacteria936Open in IMG/M
3300012582|Ga0137358_10460393All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae858Open in IMG/M
3300012923|Ga0137359_11412278All Organisms → cellular organisms → Bacteria584Open in IMG/M
3300012924|Ga0137413_11397265Not Available565Open in IMG/M
3300012927|Ga0137416_10303999All Organisms → cellular organisms → Bacteria1323Open in IMG/M
3300013308|Ga0157375_13239349All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium543Open in IMG/M
3300013308|Ga0157375_13320354All Organisms → cellular organisms → Bacteria536Open in IMG/M
3300014201|Ga0181537_11062889All Organisms → cellular organisms → Bacteria547Open in IMG/M
3300014657|Ga0181522_10990171All Organisms → cellular organisms → Bacteria521Open in IMG/M
3300014968|Ga0157379_11495862All Organisms → cellular organisms → Bacteria657Open in IMG/M
3300015245|Ga0137409_10553065All Organisms → cellular organisms → Bacteria978Open in IMG/M
3300015264|Ga0137403_10673831All Organisms → cellular organisms → Bacteria895Open in IMG/M
3300016319|Ga0182033_11954940Not Available534Open in IMG/M
3300016387|Ga0182040_10443144All Organisms → cellular organisms → Bacteria1028Open in IMG/M
3300017946|Ga0187879_10861687All Organisms → cellular organisms → Bacteria → Acidobacteria507Open in IMG/M
3300017997|Ga0184610_1329765All Organisms → cellular organisms → Bacteria500Open in IMG/M
3300018009|Ga0187884_10415567All Organisms → cellular organisms → Bacteria541Open in IMG/M
3300019377|Ga0190264_10566440All Organisms → cellular organisms → Bacteria → Acidobacteria799Open in IMG/M
3300020579|Ga0210407_10953664All Organisms → cellular organisms → Bacteria656Open in IMG/M
3300020579|Ga0210407_11295161All Organisms → cellular organisms → Bacteria544Open in IMG/M
3300020580|Ga0210403_10147001Not Available1926Open in IMG/M
3300020580|Ga0210403_10886350All Organisms → cellular organisms → Bacteria704Open in IMG/M
3300020582|Ga0210395_10481522All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisoma → Acidisoma silvae934Open in IMG/M
3300020583|Ga0210401_10012864All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae8141Open in IMG/M
3300020583|Ga0210401_10552793All Organisms → cellular organisms → Bacteria1013Open in IMG/M
3300020583|Ga0210401_10803522All Organisms → cellular organisms → Bacteria800Open in IMG/M
3300020583|Ga0210401_11139363All Organisms → cellular organisms → Bacteria638Open in IMG/M
3300021168|Ga0210406_10168421All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1831Open in IMG/M
3300021168|Ga0210406_10340126All Organisms → cellular organisms → Bacteria1212Open in IMG/M
3300021168|Ga0210406_10392292All Organisms → cellular organisms → Bacteria1113Open in IMG/M
3300021170|Ga0210400_10353250All Organisms → cellular organisms → Bacteria1210Open in IMG/M
3300021170|Ga0210400_11350191All Organisms → cellular organisms → Bacteria570Open in IMG/M
3300021170|Ga0210400_11404899All Organisms → cellular organisms → Bacteria556Open in IMG/M
3300021171|Ga0210405_10428047All Organisms → cellular organisms → Bacteria1041Open in IMG/M
3300021171|Ga0210405_10980772All Organisms → cellular organisms → Bacteria → Proteobacteria638Open in IMG/M
3300021180|Ga0210396_11179326All Organisms → cellular organisms → Bacteria642Open in IMG/M
3300021403|Ga0210397_10331583All Organisms → cellular organisms → Bacteria1124Open in IMG/M
3300021477|Ga0210398_10902241All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae708Open in IMG/M
3300021478|Ga0210402_10561559All Organisms → cellular organisms → Bacteria1059Open in IMG/M
3300021478|Ga0210402_11693391Not Available559Open in IMG/M
3300021479|Ga0210410_10671470All Organisms → cellular organisms → Bacteria917Open in IMG/M
3300021479|Ga0210410_10697906All Organisms → cellular organisms → Bacteria896Open in IMG/M
3300021479|Ga0210410_11654273All Organisms → cellular organisms → Bacteria534Open in IMG/M
3300021559|Ga0210409_10208642All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1777Open in IMG/M
3300022557|Ga0212123_10265204All Organisms → cellular organisms → Bacteria1223Open in IMG/M
3300025905|Ga0207685_10243302All Organisms → cellular organisms → Bacteria867Open in IMG/M
3300025922|Ga0207646_11894793Not Available508Open in IMG/M
3300026304|Ga0209240_1107070All Organisms → cellular organisms → Bacteria988Open in IMG/M
3300026320|Ga0209131_1401137All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae513Open in IMG/M
3300026515|Ga0257158_1042890All Organisms → cellular organisms → Bacteria822Open in IMG/M
3300026551|Ga0209648_10626253All Organisms → cellular organisms → Bacteria590Open in IMG/M
3300026557|Ga0179587_10444552All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter aggregans848Open in IMG/M
3300027034|Ga0209730_1043089Not Available526Open in IMG/M
3300027161|Ga0208368_111512Not Available512Open in IMG/M
3300027629|Ga0209422_1009342All Organisms → cellular organisms → Bacteria2416Open in IMG/M
3300027643|Ga0209076_1022147All Organisms → cellular organisms → Bacteria1734Open in IMG/M
3300027663|Ga0208990_1017897All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria2332Open in IMG/M
3300027667|Ga0209009_1006364All Organisms → cellular organisms → Bacteria2816Open in IMG/M
3300027667|Ga0209009_1019384All Organisms → cellular organisms → Bacteria1649Open in IMG/M
3300027846|Ga0209180_10109339All Organisms → cellular organisms → Bacteria1579Open in IMG/M
3300027853|Ga0209274_10025200All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae2729Open in IMG/M
3300027857|Ga0209166_10022942All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Zeaxanthinibacter → Zeaxanthinibacter enoshimensis3867Open in IMG/M
3300027884|Ga0209275_10230542Not Available1010Open in IMG/M
3300027884|Ga0209275_10426626All Organisms → cellular organisms → Bacteria750Open in IMG/M
3300027911|Ga0209698_11426633All Organisms → cellular organisms → Bacteria504Open in IMG/M
3300028381|Ga0268264_10109270All Organisms → cellular organisms → Bacteria2419Open in IMG/M
3300028798|Ga0302222_10178579All Organisms → cellular organisms → Bacteria834Open in IMG/M
3300028906|Ga0308309_10338984All Organisms → cellular organisms → Bacteria1279Open in IMG/M
3300028906|Ga0308309_11268440All Organisms → cellular organisms → Bacteria → Acidobacteria634Open in IMG/M
3300029636|Ga0222749_10395202All Organisms → cellular organisms → Bacteria732Open in IMG/M
3300029636|Ga0222749_10400869All Organisms → cellular organisms → Bacteria727Open in IMG/M
3300029943|Ga0311340_11241195All Organisms → cellular organisms → Bacteria597Open in IMG/M
3300030760|Ga0265762_1045781All Organisms → cellular organisms → Bacteria866Open in IMG/M
3300030991|Ga0073994_11784017All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter aggregans501Open in IMG/M
3300031057|Ga0170834_100076229All Organisms → cellular organisms → Bacteria770Open in IMG/M
3300031057|Ga0170834_109170170All Organisms → cellular organisms → Bacteria807Open in IMG/M
3300031708|Ga0310686_101438239Not Available614Open in IMG/M
3300031715|Ga0307476_10077279All Organisms → cellular organisms → Bacteria → Acidobacteria2318Open in IMG/M
3300031718|Ga0307474_11037782All Organisms → cellular organisms → Bacteria649Open in IMG/M
3300031718|Ga0307474_11304162All Organisms → cellular organisms → Bacteria → Acidobacteria573Open in IMG/M
3300031720|Ga0307469_10708479All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae914Open in IMG/M
3300031753|Ga0307477_10193923All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1414Open in IMG/M
3300031753|Ga0307477_11044432All Organisms → cellular organisms → Bacteria535Open in IMG/M
3300031754|Ga0307475_10553402All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisoma → Acidisoma silvae923Open in IMG/M
3300031754|Ga0307475_11512294All Organisms → cellular organisms → Bacteria → Acidobacteria515Open in IMG/M
3300031823|Ga0307478_10058333All Organisms → cellular organisms → Bacteria2883Open in IMG/M
3300031941|Ga0310912_10504849All Organisms → cellular organisms → Bacteria943Open in IMG/M
3300031962|Ga0307479_10177987All Organisms → cellular organisms → Bacteria2091Open in IMG/M
3300031962|Ga0307479_11870974All Organisms → cellular organisms → Bacteria → Acidobacteria551Open in IMG/M
3300032174|Ga0307470_11860253All Organisms → cellular organisms → Bacteria → Acidobacteria511Open in IMG/M
3300032180|Ga0307471_100069340All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae3031Open in IMG/M
3300032205|Ga0307472_102465628All Organisms → cellular organisms → Bacteria528Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil23.13%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil18.66%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil10.45%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil8.96%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil7.46%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil2.99%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere2.99%
Iron-Sulfur Acid SpringEnvironmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring2.24%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil2.24%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil2.24%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere2.24%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Peatland1.49%
BogEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog1.49%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil1.49%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil1.49%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil1.49%
PalsaEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa1.49%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere1.49%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.49%
Attine Ant Fungus GardensHost-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens1.49%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment0.75%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds0.75%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.75%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.75%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001180Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M3EnvironmentalOpen in IMG/M
3300001471Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2EnvironmentalOpen in IMG/M
3300002245Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)EnvironmentalOpen in IMG/M
3300002917Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_100cmEnvironmentalOpen in IMG/M
3300003505Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)EnvironmentalOpen in IMG/M
3300005445Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaGEnvironmentalOpen in IMG/M
3300005471Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaGEnvironmentalOpen in IMG/M
3300005541Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1EnvironmentalOpen in IMG/M
3300005591Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1EnvironmentalOpen in IMG/M
3300005610Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3EnvironmentalOpen in IMG/M
3300005712Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4EnvironmentalOpen in IMG/M
3300005843Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2Host-AssociatedOpen in IMG/M
3300006176Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5EnvironmentalOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300006893Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaGEnvironmentalOpen in IMG/M
3300007076Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4Host-AssociatedOpen in IMG/M
3300007258Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3EnvironmentalOpen in IMG/M
3300007265Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1EnvironmentalOpen in IMG/M
3300009038Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaGEnvironmentalOpen in IMG/M
3300009088Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaGEnvironmentalOpen in IMG/M
3300009090Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaGEnvironmentalOpen in IMG/M
3300009162Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2Host-AssociatedOpen in IMG/M
3300010159Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3EnvironmentalOpen in IMG/M
3300010375Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaGHost-AssociatedOpen in IMG/M
3300011271Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaGEnvironmentalOpen in IMG/M
3300011429Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT600_2EnvironmentalOpen in IMG/M
3300012039Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT534_2EnvironmentalOpen in IMG/M
3300012161Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT300_2EnvironmentalOpen in IMG/M
3300012169Attine ant fungus gardens microbial communities from North Carolina, USA - TSNC074 MetaGHost-AssociatedOpen in IMG/M
3300012202Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaGEnvironmentalOpen in IMG/M
3300012203Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaGEnvironmentalOpen in IMG/M
3300012205Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaGEnvironmentalOpen in IMG/M
3300012361Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaGEnvironmentalOpen in IMG/M
3300012582Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaGEnvironmentalOpen in IMG/M
3300012923Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaGEnvironmentalOpen in IMG/M
3300012924Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012927Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300013308Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaGHost-AssociatedOpen in IMG/M
3300014201Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_10_metaGEnvironmentalOpen in IMG/M
3300014657Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaGEnvironmentalOpen in IMG/M
3300014968Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaGHost-AssociatedOpen in IMG/M
3300015245Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300015264Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300016319Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00HEnvironmentalOpen in IMG/M
3300016387Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176EnvironmentalOpen in IMG/M
3300017946Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10EnvironmentalOpen in IMG/M
3300017997Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_coexEnvironmentalOpen in IMG/M
3300018009Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_40EnvironmentalOpen in IMG/M
3300019377Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 TEnvironmentalOpen in IMG/M
3300020579Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-MEnvironmentalOpen in IMG/M
3300020580Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-MEnvironmentalOpen in IMG/M
3300020582Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-OEnvironmentalOpen in IMG/M
3300020583Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-MEnvironmentalOpen in IMG/M
3300021168Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-MEnvironmentalOpen in IMG/M
3300021170Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-MEnvironmentalOpen in IMG/M
3300021171Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-MEnvironmentalOpen in IMG/M
3300021180Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-OEnvironmentalOpen in IMG/M
3300021403Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-OEnvironmentalOpen in IMG/M
3300021477Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-OEnvironmentalOpen in IMG/M
3300021478Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-MEnvironmentalOpen in IMG/M
3300021479Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-MEnvironmentalOpen in IMG/M
3300021559Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-MEnvironmentalOpen in IMG/M
3300022557Paint Pots_combined assemblyEnvironmentalOpen in IMG/M
3300025905Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025922Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026304Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm (SPAdes)EnvironmentalOpen in IMG/M
3300026320Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm (SPAdes)EnvironmentalOpen in IMG/M
3300026515Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-03-AEnvironmentalOpen in IMG/M
3300026551Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)EnvironmentalOpen in IMG/M
3300026557Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungalEnvironmentalOpen in IMG/M
3300027034Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_RefH0_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027161Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF032 (SPAdes)EnvironmentalOpen in IMG/M
3300027629Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M3 (SPAdes)EnvironmentalOpen in IMG/M
3300027643Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3 (SPAdes)EnvironmentalOpen in IMG/M
3300027663Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_M3 (SPAdes)EnvironmentalOpen in IMG/M
3300027667Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027846Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027853Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)EnvironmentalOpen in IMG/M
3300027857Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300027884Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)EnvironmentalOpen in IMG/M
3300027911Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)EnvironmentalOpen in IMG/M
3300028381Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300028798Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E2_2EnvironmentalOpen in IMG/M
3300028906Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)EnvironmentalOpen in IMG/M
3300029636Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300029943I_Palsa_N3 coassemblyEnvironmentalOpen in IMG/M
3300030760Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI4 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300030991Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-1A (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300031057Oak Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031708FICUS49499 Metagenome Czech Republic combined assemblyEnvironmentalOpen in IMG/M
3300031715Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05EnvironmentalOpen in IMG/M
3300031718Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05EnvironmentalOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M
3300031753Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515EnvironmentalOpen in IMG/M
3300031754Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515EnvironmentalOpen in IMG/M
3300031823Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05EnvironmentalOpen in IMG/M
3300031941Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080EnvironmentalOpen in IMG/M
3300031962Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515EnvironmentalOpen in IMG/M
3300032174Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300032205Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI12695J13573_100437413300001180Forest SoilMTFRIETVARGRFKVFVLSGRIETSAIAELRRLLELQTDCRDIVL
JGI12712J15308_1008177523300001471Forest SoilMTFRIETAARGRFTVFILSGRIETQATAELRKLFELQTDYRDIVLDLKDA
JGIcombinedJ26739_10088726623300002245Forest SoilMTFRIETAKRGKLTVFGLSGRIEKQAIAELNRLFGLQANYRAIVIDLKDVSVVDRDALHF
JGI25616J43925_1002150913300002917Grasslands SoilMTFRIETATRGRFTAFILSGRIETQAIAELRRLFKLQTDSRDIVLDLKDVSLVSRDVMGF
JGIcombinedJ51221_1020110823300003505Forest SoilMTFRIETAARGRVTVFTLCGRIEKHAIAELRRLFELQTDYHDIVLDLKDVSVIDRDVMGFFISCE
Ga0070708_10177067913300005445Corn, Switchgrass And Miscanthus RhizosphereMAFRIETAARGKFSVFILSGHIETQAMGELRRLFGLHTNCSNLVVDLKDV
Ga0070698_10108057113300005471Corn, Switchgrass And Miscanthus RhizosphereMAFRIETAARGRLSIFILSGHIDTQAMAELERLFELHTDCRDIVVDLRDVSMVDREVMRFLM
Ga0070733_1054404923300005541Surface SoilMTFRIETEARGRLTVFILSGRIEKPAIAELRRLFELQTDYRDIVLD
Ga0070761_1000724843300005591SoilMTFRIETAGRGGFTVFILSGQIEKQAIAELRRILELRTGYRDIVLDLKDVSLVDCDVIHFFVRCEADGGRRAAAC*
Ga0070763_1013254713300005610SoilMTFRIETAARGKCRVFILSGRIEELAIAELRRLFELQTDYRGIVLDLREVGVVDREVM
Ga0070763_1022568213300005610SoilMTFRIETEARGRFTVFILSGRIEKPAIAELRRLFELQTDYRDIVLDLKDVSVVDREVMRFFISCE
Ga0070763_1026238913300005610SoilMTFRIETAARGRFTVFLLSGRIEKEAIAVLRRLCELQPDSRDIVFDLKDVSVVDRNAL
Ga0070764_1081942213300005712SoilMTFRIETAERGRLKVFVLSGRVETQAVAELRRLFGLQTECGDIVLDLKDVSLVS
Ga0068860_10022751223300005843Switchgrass RhizosphereMTFRIEIVARGRFKVFVLSGRIETSAIAELRRLLELQTDSRDIVFDLKDVTVVNRDVMRFSYVAKRMA*
Ga0070765_10012261113300006176SoilVARGRFTVFVLSGRIEKQAIAELRRLFELQTDYRKIVLDLKDVGVINRDVMHFF
Ga0070765_10179797233300006176SoilMTFRIETEARGRFTVFILSGRIDKPAIAELRRLFDLQTDYRDIVLDLKDVA*
Ga0075425_10124803223300006854Populus RhizosphereMTFRIERAERGTFAVFVLSGRIETRAIAELRRLFELQTDYRSIVLDLKDV
Ga0073928_1003650033300006893Iron-Sulfur Acid SpringMTFRIETEVRGRFTVFILSGRLEKPAIAELRRLFKLQTDYRDIVLDLKDLSVVDREVMRLFY*
Ga0073928_1082559213300006893Iron-Sulfur Acid SpringMAFRIETAARGRCSVFILSGRIGAQAIAELARLFDLETDRCGIVVDLKDVSLIDREAMR
Ga0075435_10119389013300007076Populus RhizosphereMAFRIETAARGRFAVFILSGWIEEPAIAELRRLFESQTDYRHIVLDLKD
Ga0099793_1041849823300007258Vadose Zone SoilMTFRIETATRGRFTVFILSGRIETQAIAELRRLLELQADYCDIVLD
Ga0099794_1034813123300007265Vadose Zone SoilMTFRIETATRGTLRVFILSGRIDKQATAELRRLFEGQTDCRDIVLDMKDVGV
Ga0099829_1092038223300009038Vadose Zone SoilMTFRIETATRETLRVLNLSLRVDKQATAELRRLFEGQTDWRDIVLDMKDVGVIDR
Ga0099830_1120677213300009088Vadose Zone SoilMTFRIETAARGRFAVFILSGRIEKQAIAELRRLFELQSDYRDIVLDLKDVG
Ga0099827_1137588523300009090Vadose Zone SoilMTFRIETAERGTFTVFILSGRIETRAIAELRRLFELQTNNCDIVVDLKDVSLVGRDVMS
Ga0075423_1124253513300009162Populus RhizosphereMTFRIESASRGTFTVFLLSGRIETCAIVELRRLFELQADYRDIVVDLKDVSLVDREVMRF
Ga0099796_1022211823300010159Vadose Zone SoilMTFRIETEIPGRFTVFVLSGRIETPAIAELRSLFKLQTDGLHIVLDLKDVSLIDREVL
Ga0105239_1326783323300010375Corn RhizosphereMTFRIEIVARGRFKVFVLSGRIETSAIAELRRLLELQTDSRDIVFDLKD
Ga0137393_1081473513300011271Vadose Zone SoilMAFRIEIAARGRFTVLILSGHIETQAIAELRRLCELQTDYRDIVVDLKDVSL
Ga0137393_1098338813300011271Vadose Zone SoilMTFRIETAARGRFTVFILSGRIEAPAITELTRLFEGETGLREIVFDLKDVSVIDRDVMRFFVRCEADG
Ga0137393_1144039113300011271Vadose Zone SoilMAFRIETAARGRSSVFILSGHIEAEAIAELRTLCQLQTDCHDIVVDLKDV
Ga0137455_105039223300011429SoilMTFRIESEARGGFTVFVLSGRIETQATAELRRLFDLQTNYRDIVLD*
Ga0137421_102288213300012039SoilMTFRIETAVRGGFTVFLLSGRIEAQAIAELERLFELESDYCDIVLDLKDV
Ga0137336_106841433300012161SoilMTFRIESEARGGFTVFVLSGRIETQATAELRRLFDLQTNYRDIVLDL
Ga0153990_105938113300012169Attine Ant Fungus GardensMTFRIETAARGRSTVFILSGRLGTQVIAELSRLIELPTERDIVLDLKDVGVIDREVMRFF
Ga0153990_115568823300012169Attine Ant Fungus GardensMTFRIETAPRGRFTVFILSGRIESQAIDELRRLFELHADRCDIVLDLKDVSLIGRDV
Ga0137363_1106619813300012202Vadose Zone SoilMTFRIETATRGTLRVFILSGRIDKQATAELRGLFEGQTDCRDIVLDMKDVGVIDRD
Ga0137363_1130723423300012202Vadose Zone SoilMTFRIETATRGRFTVFVLSGRIETQAIAELQRLFECHLFQYHTDHCDMVVDLKDVSLVGRDVMGFLSRCEADGADA*
Ga0137363_1181937513300012202Vadose Zone SoilMTFRIETAARGRFTVFILSGRIETQAIAELRRLLELQADYCDIVLDLKDVSL
Ga0137399_1003348713300012203Vadose Zone SoilMTFRIETAARGRFTVFILSGRIEEPAIAELKRLFESQTDYRHIVLDLKDV
Ga0137399_1040707223300012203Vadose Zone SoilMTFRIETAARGRFTVFILSGRLEKQAIAELRRLFELQTSYFYIVLDLKEVGVI
Ga0137362_1146438713300012205Vadose Zone SoilMTFRIETAARAKSTIFILSGRIETDAIAELRRLLERQTDYQNIVLDLKDVSLVDRNAMGF
Ga0137360_1060782513300012361Vadose Zone SoilMAFRIETATRGGFTVFTLSGRIETPAIAELRRLFDLQTNYRDIVVDLKDVS
Ga0137358_1046039313300012582Vadose Zone SoilMTFRIETAARGRFTVFVLSGRIEIQAIAEFRRLFELQPDSRDIVLDLKDVSVLDHDTLRLFAHCEAL
Ga0137359_1141227823300012923Vadose Zone SoilMAFRIETAARGRLTVFALSGRIEKQAVKELSTLFEGQTDWRDIVLDL
Ga0137413_1139726523300012924Vadose Zone SoilMTFRIETAARGRSTIFILSGRIETDAIAELRRLLERQTDYQNIVLDLKDVSLVDRNAMGF
Ga0137416_1030399923300012927Vadose Zone SoilMTFRIETATRGSFTVFILSGRIETQAIAELRRLFKLQTEYRYIVLDLKDVSLVSR
Ga0157375_1323934923300013308Miscanthus RhizosphereVARGRFKVFVLSGRIETSAIAELRRLLELQTDSRDIVFDLKDVTVVNRDVMRFSYVAKRMA*
Ga0157375_1332035423300013308Miscanthus RhizosphereMAFRIETAARGRGTVFILSGRIEKEAIGELSRLFECQTDYRDIVLDLK
Ga0181537_1106288923300014201BogMTFRIETAARGRLKVFVLSGRVETQAIAELRRLFGLQTDCRDIVLDLKDVSLVSRDA
Ga0181522_1099017123300014657BogMTFRIETAARGRLKVFVLSGRVETQAIAELRRLFGLQTDCRDIVLDLKDVS
Ga0157379_1149586223300014968Switchgrass RhizosphereMPFRIETAARGRFTVFLLSGRIEAPAIFELRRLCKDQTNLIDIVFDLKDVS
Ga0137409_1055306523300015245Vadose Zone SoilMAFRIETATRGKFTVFTLSGRIEKEAIAELERLFACQTDFREIVLNLKDVSV
Ga0137403_1067383123300015264Vadose Zone SoilMTFRIETAERGTFTVFILSGRIETRAIAELRRLFELQTEYRSIVLDLTDVSWID
Ga0182033_1195494013300016319SoilMTFRIETTTRGRFTVLTLTGRIETEAIAELRGVLELQTDYHDVVLDLKDVSVISRDALGFFVRSESDGIRLVRC
Ga0182040_1044314423300016387SoilMTFRIETALRGRSTVFLLSGRIEKPAIVELKKLFERQADYCDIVLDLKIKQLNIKKNPIR
Ga0187879_1086168713300017946PeatlandMAFRIETAARGRFTVFILSGRIEKEAIVELKKLFECHADYRDIVLDLKDVSVID
Ga0184610_132976513300017997Groundwater SedimentMTFRIESAVRGRFTVFLLSGRIETQAIAELRRLFELQRDYRDIVVDLKDVDVVDRNVVC
Ga0187884_1041556713300018009PeatlandMTFRIETAARGRLKVFALSGRVETQAIAELRRLFGLQTDCRDIVLDLK
Ga0190264_1056644013300019377SoilMWAEMTFRIETATRGRLTVFILSGRIETPAMAELKRLFEGQTDWRDIVLDLKDVRVIDRDVV
Ga0210407_1095366413300020579SoilMTFRIETAARGRFTLFTLSGRIETPAIAELRRLFELQANYGDIVVD
Ga0210407_1129516123300020579SoilMTFRIETESRTIFLLSGRIEKEAIAELRRLFGKQTDQRGIVLDLKEVIVIDREAM
Ga0210403_1014700123300020580SoilMTFRIETAARGRFTVFVLSGRIEKQAIAEMRRLFELQTDYRDIVLGLKAVA
Ga0210403_1088635013300020580SoilMTFRIETAARGRFTVFVLSGRIEKQAIAEMRRLFELQTDYRDIVLDLKVVGVIDRD
Ga0210395_1048152223300020582SoilMAFRIETAARGRVTVFALSGRIEKQAIEELRKLLESQKELREIVLDLKDV
Ga0210401_1001286453300020583SoilMTFRIETAARGKLTVFVLSGRIEKQAIAELKRLFGLEANYRAIVIDLKDVSVVDRDALHFFAAREADG
Ga0210401_1055279313300020583SoilMAFRIETASRGRFTVFTLSGRIEEQAIAELKRLFECQTDRRDLVL
Ga0210401_1080352213300020583SoilMTFRIETEARGRFTVFILSGRIEKPAIAELRRLFELRTDYRDIVIDLKDVSVVDREGMR
Ga0210401_1113936313300020583SoilMTFRIETAARGRLTVFILSGRIEKQAIAELRRLFEGQTEHRKMVLDMKD
Ga0210406_1016842133300021168SoilMTFRIETAARGNCTVFVLSGRIETPAIAELTRLFKLQTDYHHIVLDLKDV
Ga0210406_1034012613300021168SoilMAFRIETAARGRLTIFALSGRIEKQAIEELRKLLESQKELHEIVLDLKDVSLVDRE
Ga0210406_1039229213300021168SoilMSFRIETEARGTSTVFILSGRIDTPAIAELRRLFELQADHRDIILDL
Ga0210400_1035325013300021170SoilMTFRIETAARGGVTVFTLCGRIEKHAIAELRRLFELQTDYHDIVLDLKDVSVIDRDVMGF
Ga0210400_1135019113300021170SoilMTFRIDTAARGKFIVFLLSGRFGTEAIAELRRLFELQTDCRNIVVDLKDVSMVDRE
Ga0210400_1140489923300021170SoilMTFRIETTPRGKFTVFILSGRIESQAIDELRRLLELHADRRDIVLDLKD
Ga0210405_1042804733300021171SoilMTFRIETAARGKFTVFVLSGRIDKQAIAELKRLFDLQTDHRDIVLDLKDVSSIDREVIG
Ga0210405_1098077213300021171SoilMAFRIETEARGKFTVFILRGRIERQAIAELRRLFECHTDYCDIE
Ga0210396_1117932623300021180SoilMTFRIETEARGRFTAFILSGRIEKPAIAELRRLFKLQTDYRDIVLDLKAVSAVDREVMRFFIS
Ga0210397_1033158313300021403SoilMTFRIETAIRGRFTVFFLSGRIETPAIAELRSLFKLQTDGLHIVLDLKDVSLIDREVL
Ga0210398_1090224123300021477SoilMAFRIETAARGRFTVFILSGRIEKEAIVELKKLFECQADYRDIVLDLKDVSVIDRE
Ga0210402_1056155923300021478SoilMTFRIETAARGRVTVFTLCGRIEKHAIAELRRLFELQTDYHDIVLDLQDVSVID
Ga0210402_1169339113300021478SoilMTFRIETAARGGSTLVILSGRIEKQAIAELRKLFELQTQSRDIVLDLKDVSVVDR
Ga0210410_1067147013300021479SoilMAFRIEIAARGRFTVFILSGHVETQAIAELRRLREFQTDYRDIVVDLKDVSLVDREAMRCFMSWEAD
Ga0210410_1069790623300021479SoilMTFRIETAARGRVTVFTLCGRIEKHAIAELRRLFELQTDYHDIVLDLQDVSVIDRDVMGFFISCEA
Ga0210410_1165427323300021479SoilMTFRIETATRGRFTVFILSGRIETQAIAELRRLFKLQTEYRYIVLD
Ga0210409_1020864213300021559SoilMTFRIETAARGRVTVFSLCGRIEKQVIAELKRLFEFQTDYRDIVLDLKEV
Ga0212123_1026520413300022557Iron-Sulfur Acid SpringMTFRIETEVRGRFTVFILSGRLEKPAIAELRRLFKLQTDYRDIVLDLKDLSVVDREVMRLFY
Ga0207685_1024330213300025905Corn, Switchgrass And Miscanthus RhizosphereMTFRIETEARGRFAVFILSGRIEKAAIAELRRLFGLQTDYRNIVIDLKDVGVVDREVM
Ga0207646_1189479313300025922Corn, Switchgrass And Miscanthus RhizosphereMAFRIETATRGRLRIFILSGHIETQAMAELKRLFELQTDCRDIVVDLRDVSM
Ga0209240_110707023300026304Grasslands SoilMTFRIETAARGRFTVFIMSGQIETPAIAELRRLFELETDYRNIVLDLKDVSLVDRDVMA
Ga0209131_140113723300026320Grasslands SoilMTFRIETAARGRFTVFVLSGRIEKQAIAEMRRLFELQTDHRGIVLDLKNVGVIDRDALHFFAG
Ga0257158_104289023300026515SoilMTFRIESVARGGFKVFVLSGRVEAPAIDELSRLFELQTDYHRIVLDLKDVTVV
Ga0209648_1062625313300026551Grasslands SoilMTFRIETAARGKCTVFILSGRIEGPAIAELRRLFELQTDYRGIVLDLKDVG
Ga0179587_1044455213300026557Vadose Zone SoilMTFRIESTARGGFTVFVLSGRIETPAIAELKRLFELQTDYRDIVLDLKD
Ga0209730_104308913300027034Forest SoilMAFRIETAAREKFTVFVLSGRIDMQAIAELRRLFELQPNARDIVLDLKDVSVVDRDTLR
Ga0208368_11151223300027161Forest SoilMTFRIETAGRGKCTVFLLSGRVEGPAIAELRRLFELQTDYHDIVLDLKDVSVIDRDV
Ga0209422_100934223300027629Forest SoilMTFRIETAARGRGTVFTLCGRIEKQAIAELRRLFEFQTDYRDIVLDLKDVGAVDREVMRFFISCEAEGMQWQHSRDFDAARMA
Ga0209076_102214733300027643Vadose Zone SoilMTFRIETAARGRFTVFILSGRIERQAIAELRRLFELQANYCDIVLDLKD
Ga0208990_101789723300027663Forest SoilMTFRIESAARGNFTLFILSGRIEKSAIAELRRLFERQTDYQDVVLDL
Ga0209009_100636413300027667Forest SoilMAWPMAFRIETAARGRLTVFSLTGRIEKQATAELRRLFELQTDYRSIVLDLKD
Ga0209009_101938413300027667Forest SoilMIFRVETAAQGRFTIFVLSGRIEKPAIAELRRFFKLQTDYRDIVLDLKGVGTVDREV
Ga0209180_1010933913300027846Vadose Zone SoilMTFRIETAARGGCAVFNLSGRIETPAIAELRRLFQCQTDYRDIVLDLK
Ga0209274_1002520023300027853SoilMTFRIETAGRGGFTVFILSGQIEKQAIAELRRILELRTGYRDIVLDLKDVSLVDCDVIHFFVRCEADGGRRAAAC
Ga0209166_1002294253300027857Surface SoilMTFRIETNARGRSTVITLSGRIEKPAIAELRRLFELQKDYHDVVLDLKDVGVVDREVMRFFMSCE
Ga0209275_1023054213300027884SoilMAFRIETAARGRFTVFILSGRIEKEAIVELKKLFECQADYRDIVLDLKDVSVIDREVM
Ga0209275_1042662623300027884SoilMTFRIETAERGTFTVFILSGRIETRAIAELRRLFELQTDYRSIVLDLKDVSWVDRD
Ga0209698_1142663323300027911WatershedsMTFRIETAARGRVTVFSLCGRIEKQVIAELRRLFEFQTDYRDIVLDLKE
Ga0268264_1010927023300028381Switchgrass RhizosphereMTFRIEIVARGRFKVFVLSGRIETSAIAELRRLLELQTDSRDIVFDLKDVTVVNRDVMRFSYVAKRMA
Ga0302222_1017857913300028798PalsaMAFRIETATRGRFTVFILSGRIEKEAIVELKKLFECQADYRDIVLDLKDV
Ga0308309_1033898413300028906SoilMTFRIETAARGKCRVFILSGRIEELAIAELRRLFELQTDYRGIVLDLREVGVVDREVMRFFMSCEA
Ga0308309_1126844023300028906SoilMAFRIEIAARGRFTVFILSGHVETQATAELRKLCELQTDYRDIVVDLKDVSLVDREAMRFFMRC
Ga0222749_1039520213300029636SoilMAWSMTFRIETEARGRFAVFILSGRIEKAAIAELRGLFGLQTDYRNIVIDLKDVGVVDRE
Ga0222749_1040086913300029636SoilMAFRIEIAARGRFTVFILSGHIETQAMAELWRLCDLQTDYRDIV
Ga0311340_1124119513300029943PalsaMTFRIETAARGRLKVFVLSGRVETHAIAELRRLIGLQTDCHDIVLDLKEVR
Ga0265762_104578113300030760SoilMAFRIETAARGRLTVFALSGRIEKQAVAELSKLFEGQTDWRDIVLDLKDVG
Ga0073994_1178401713300030991SoilMTFRVETAARAKSTIFILSGRIETDAIAELRRLLERRTDWRDIVLYLKDVSVVDRDAMGFLARCEAD
Ga0170834_10007622923300031057Forest SoilMSFRIETEARGTSTVFILSGRIDTPAIAELRRLFELQTDHRDIILDL
Ga0170834_10917017013300031057Forest SoilMTFRIETAARGRFTVFTLSGRIESHAVNELTRLFELYADLRDIVLDMKD
Ga0310686_10143823913300031708SoilMTFRIETSVRGKSTIFTLSGRIDEQAIAELSRLFGRQTDYRHIVL
Ga0307476_1007727913300031715Hardwood Forest SoilMTFRIETAARGKLTVFVLSGRIEKQAIAELKRLFGLEANYRAIV
Ga0307474_1103778223300031718Hardwood Forest SoilMTFRIETEARGKFAVFVLSGRIEKAAIAELRRLFGLQTDYRNIVMDLKDVGVVDREVM
Ga0307474_1130416223300031718Hardwood Forest SoilMAFRIETAARGRFTVFILSGRIEKKAIAELGKLFGGRTNFCDIVLDLKD
Ga0307469_1070847923300031720Hardwood Forest SoilMTFRIETTERGRCTVFLLSGRIEKQAIAELKRLFDLQADVRDIVLDMKDVSVVDRNALHIFSGCDADGMKLE
Ga0307477_1019392313300031753Hardwood Forest SoilMTFRIETAARGGVTVFTLCGRIERHAIAELRRLFELQTDYHDIVLDLKDVSVIDRDVMGF
Ga0307477_1104443223300031753Hardwood Forest SoilMTFRIETAARGRFIVFALSGRIEPQAIAELRRLFDLQADYCDIVLDLKDV
Ga0307475_1055340213300031754Hardwood Forest SoilMAFRIETAARGRVTVFALSGRIEKQAIEELRKLLESQKELHEIVLDLKDV
Ga0307475_1151229423300031754Hardwood Forest SoilMTFRIETVARGRFKVFVLSGRIETSAIAELRRLLELQTDCRDIVLDLKDVTV
Ga0307478_1005833313300031823Hardwood Forest SoilMTFRIETAARGRVTVFSLCGRIEKQVIAELRRLFEFQTDYRDIVLDLKEVGVV
Ga0310912_1050484923300031941SoilMTFRIETAARGRFTVLTLSGRFDTQAIAELRRLLELQPDYRDVILDLRDVSVISRDVMRFLVRCE
Ga0307479_1017798723300031962Hardwood Forest SoilMTFRIETATRGRFTVFILSGRIETQAIAELRRLFKLQTEYRHIVLD
Ga0307479_1187097413300031962Hardwood Forest SoilMTFRIDTETRGKFTVFVLSGRIETQAMAELRRLFELQADCHNIVLDLKDVSVVDRAVI
Ga0307470_1186025323300032174Hardwood Forest SoilMAFRIETAARGRFTVFILSGRIEKEAIAELRRLFECQPDYRDIILDLKDVGLIDRDVMSF
Ga0307471_10006934013300032180Hardwood Forest SoilMTFRIETEARGRFAVFILSGRIEKAAIAELRRLFGLQTDYRNIVIDLK
Ga0307472_10246562813300032205Hardwood Forest SoilMTFRIETAARGRVTVFSLCGRIEKQVIAELRRLFEFQTDYRDIVL

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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