Metagenome Family F059088

Basic Information
Family ID	F059088
Family Type	Metagenome
Number of Sequences	134
Average Sequence Length	47 residues
Representative Sequence	MTLAQVRSKTERIREFSALPFLLVAGISAAGAFFRAAPQAVTGGP
Number of Associated Samples	114
Number of Associated Scaffolds	134

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	99.25 %
% of genes near scaffold ends (potentially truncated)	97.76 %
% of genes from short scaffolds (< 2000 bps)	95.52 %
Associated GOLD sequencing projects	108
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.49

Most Common Taxonomy
Group	Unclassified (77.612 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (14.925 % of family members)
Environment Ontology (ENVO)	Unclassified (32.090 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (56.716 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 38.36% β-sheet: 0.00% Coil/Unstructured: 61.64%
Feature Viewer

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Pfam ID	Name	% Frequency in 134 Family Scaffolds
PF00330	Aconitase	40.30
PF00106	adh_short	0.75
PF04069	OpuAC	0.75
PF00953	Glycos_transf_4	0.75
PF00694	Aconitase_C	0.75
PF08331	QueG_DUF1730	0.75

COG ID	Name	Functional Category	% Frequency in 134 Family Scaffolds
COG0472	UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase	Cell wall/membrane/envelope biogenesis [M]	0.75
COG1600	Epoxyqueuosine reductase QueG (queuosine biosynthesis)	Translation, ribosomal structure and biogenesis [J]	0.75

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	77.61 %
All Organisms	root	All Organisms	22.39 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	77.61 %
cellular organisms	root	All Organisms → cellular organisms	22.39 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	77.61 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	21.64 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	77.61 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	3.73 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.49 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.75 %
Viridiplantae	kingdom	All Organisms → cellular organisms → Eukaryota → Viridiplantae	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	77.61 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	2.24 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.49 %
Vicinamibacteria	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria	0.75 %
Streptophyta	phylum	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta	0.75 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	77.61 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.24 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.49 %
Streptophytina	subphylum	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina	0.75 %
Vicinamibacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales	0.75 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	77.61 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.24 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.49 %
Cytophagia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia	0.75 %
Vicinamibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae	0.75 %
Embryophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	77.61 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.24 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.49 %
Cytophagales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales	0.75 %
Luteitalea	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea	0.75 %
Tracheophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	77.61 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.24 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.49 %
Spirosomaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Spirosomaceae	0.75 %
Luteitalea pratensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	0.75 %
Euphyllophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	77.61 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.24 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.49 %
Spermatophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta	0.75 %
Runella	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Spirosomaceae → Runella	0.75 %
Luteitalea pratensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	77.61 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.24 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.49 %
Runella slithyformis	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Spirosomaceae → Runella → Runella slithyformis	0.75 %
Magnoliopsida	class	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida	0.75 %
Luteitalea pratensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	77.61 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.24 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.49 %
Mesangiospermae	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae	0.75 %
Runella slithyformis	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Spirosomaceae → Runella → Runella slithyformis	0.75 %
Luteitalea pratensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	77.61 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.24 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.49 %
eudicotyledons	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons	0.75 %
Runella slithyformis	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Spirosomaceae → Runella → Runella slithyformis	0.75 %
Luteitalea pratensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	77.61 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.24 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.49 %
Gunneridae	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae	0.75 %
Runella slithyformis	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Spirosomaceae → Runella → Runella slithyformis	0.75 %
Luteitalea pratensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	77.61 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.24 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.49 %
Pentapetalae	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae	0.75 %
Runella slithyformis	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Spirosomaceae → Runella → Runella slithyformis	0.75 %
Luteitalea pratensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	77.61 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.24 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.49 %
asterids	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → asterids	0.75 %
Runella slithyformis	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Spirosomaceae → Runella → Runella slithyformis	0.75 %
Luteitalea pratensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	77.61 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.24 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.49 %
campanulids	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → asterids → campanulids	0.75 %
Runella slithyformis	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Spirosomaceae → Runella → Runella slithyformis	0.75 %
Luteitalea pratensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	77.61 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.24 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.49 %
Asterales	order	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → asterids → campanulids → Asterales	0.75 %
Runella slithyformis	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Spirosomaceae → Runella → Runella slithyformis	0.75 %
Luteitalea pratensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	77.61 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.24 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.49 %
Asteraceae	family	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → asterids → campanulids → Asterales → Asteraceae	0.75 %
Runella slithyformis	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Spirosomaceae → Runella → Runella slithyformis	0.75 %
Luteitalea pratensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	77.61 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.24 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.49 %
Asteroideae	subfamily	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → asterids → campanulids → Asterales → Asteraceae → Asteroideae	0.75 %
Runella slithyformis	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Spirosomaceae → Runella → Runella slithyformis	0.75 %
Luteitalea pratensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	77.61 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.24 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.49 %
Anthemideae	tribe	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → asterids → campanulids → Asterales → Asteraceae → Asteroideae → Anthemideae	0.75 %
Runella slithyformis	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Spirosomaceae → Runella → Runella slithyformis	0.75 %
Luteitalea pratensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	77.61 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.24 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.49 %
Anthemidinae	subtribe	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → asterids → campanulids → Asterales → Asteraceae → Asteroideae → Anthemideae → Anthemidinae	0.75 %
Runella slithyformis	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Spirosomaceae → Runella → Runella slithyformis	0.75 %
Luteitalea pratensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	77.61 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.24 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.49 %
Tanacetum	genus	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → asterids → campanulids → Asterales → Asteraceae → Asteroideae → Anthemideae → Anthemidinae → Tanacetum	0.75 %
Runella slithyformis	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Spirosomaceae → Runella → Runella slithyformis	0.75 %
Luteitalea pratensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	77.61 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.24 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.49 %
Tanacetum cinerariifolium	species	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → asterids → campanulids → Asterales → Asteraceae → Asteroideae → Anthemideae → Anthemidinae → Tanacetum → Tanacetum cinerariifolium	0.75 %
Runella slithyformis	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Spirosomaceae → Runella → Runella slithyformis	0.75 %
Luteitalea pratensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	0.75 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_100552673	Not Available	645	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_101792065	Not Available	579	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_105588734	Not Available	520	Open in IMG/M
3300001305\|C688J14111_10250536	Not Available	555	Open in IMG/M
3300001431\|F14TB_103257628	Not Available	526	Open in IMG/M
3300004156\|Ga0062589_102159033	Not Available	569	Open in IMG/M
3300004480\|Ga0062592_100653044	Not Available	905	Open in IMG/M
3300005175\|Ga0066673_10308529	Not Available	923	Open in IMG/M
3300005294\|Ga0065705_10406082	Not Available	871	Open in IMG/M
3300005294\|Ga0065705_10930507	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Spirosomaceae → Runella → Runella slithyformis	567	Open in IMG/M
3300005295\|Ga0065707_10424166	Not Available	827	Open in IMG/M
3300005330\|Ga0070690_100424483	Not Available	981	Open in IMG/M
3300005332\|Ga0066388_100510426	All Organisms → cellular organisms → Bacteria	1837	Open in IMG/M
3300005332\|Ga0066388_102722565	Not Available	902	Open in IMG/M
3300005334\|Ga0068869_101731106	All Organisms → cellular organisms → Bacteria → Proteobacteria	558	Open in IMG/M
3300005343\|Ga0070687_101512097	Not Available	505	Open in IMG/M
3300005444\|Ga0070694_101683602	Not Available	539	Open in IMG/M
3300005455\|Ga0070663_101251729	Not Available	653	Open in IMG/M
3300005518\|Ga0070699_101202868	Not Available	695	Open in IMG/M
3300005536\|Ga0070697_100144678	All Organisms → cellular organisms → Bacteria	2000	Open in IMG/M
3300005536\|Ga0070697_100993390	All Organisms → cellular organisms → Bacteria → Proteobacteria	746	Open in IMG/M
3300005540\|Ga0066697_10090905	All Organisms → cellular organisms → Bacteria	1771	Open in IMG/M
3300005543\|Ga0070672_100234034	All Organisms → cellular organisms → Bacteria	1544	Open in IMG/M
3300005543\|Ga0070672_100597506	Not Available	961	Open in IMG/M
3300005546\|Ga0070696_100882188	Not Available	741	Open in IMG/M
3300005546\|Ga0070696_101266455	Not Available	625	Open in IMG/M
3300005549\|Ga0070704_100277175	All Organisms → cellular organisms → Bacteria	1388	Open in IMG/M
3300005559\|Ga0066700_10055029	All Organisms → cellular organisms → Bacteria	2462	Open in IMG/M
3300005575\|Ga0066702_10161195	All Organisms → cellular organisms → Bacteria	1335	Open in IMG/M
3300005578\|Ga0068854_100892170	Not Available	781	Open in IMG/M
3300005598\|Ga0066706_10477925	Not Available	993	Open in IMG/M
3300005616\|Ga0068852_101317388	Not Available	744	Open in IMG/M
3300005617\|Ga0068859_101763394	Not Available	684	Open in IMG/M
3300005764\|Ga0066903_106294766	All Organisms → cellular organisms → Bacteria	620	Open in IMG/M
3300005764\|Ga0066903_108024812	Not Available	541	Open in IMG/M
3300005843\|Ga0068860_101338916	Not Available	737	Open in IMG/M
3300006034\|Ga0066656_10973915	Not Available	544	Open in IMG/M
3300006046\|Ga0066652_101847994	Not Available	544	Open in IMG/M
3300006049\|Ga0075417_10559151	All Organisms → cellular organisms → Bacteria → Acidobacteria	579	Open in IMG/M
3300006162\|Ga0075030_101501139	All Organisms → cellular organisms → Bacteria	527	Open in IMG/M
3300006237\|Ga0097621_100284915	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1455	Open in IMG/M
3300006237\|Ga0097621_102395856	Not Available	505	Open in IMG/M
3300006791\|Ga0066653_10588061	Not Available	565	Open in IMG/M
3300006852\|Ga0075433_11797358	Not Available	527	Open in IMG/M
3300006854\|Ga0075425_100502638	All Organisms → cellular organisms → Bacteria	1396	Open in IMG/M
3300006854\|Ga0075425_101035062	Not Available	936	Open in IMG/M
3300006854\|Ga0075425_101523203	All Organisms → cellular organisms → Bacteria	755	Open in IMG/M
3300006871\|Ga0075434_100664934	Not Available	1060	Open in IMG/M
3300006880\|Ga0075429_101039380	Not Available	716	Open in IMG/M
3300006904\|Ga0075424_100869649	Not Available	962	Open in IMG/M
3300007076\|Ga0075435_100218944	All Organisms → cellular organisms → Bacteria	1616	Open in IMG/M
3300007076\|Ga0075435_101817626	Not Available	535	Open in IMG/M
3300007255\|Ga0099791_10466449	All Organisms → cellular organisms → Bacteria	611	Open in IMG/M
3300007258\|Ga0099793_10162112	Not Available	1062	Open in IMG/M
3300009012\|Ga0066710_103273032	Not Available	620	Open in IMG/M
3300009094\|Ga0111539_12581008	Not Available	589	Open in IMG/M
3300009098\|Ga0105245_11614452	Not Available	700	Open in IMG/M
3300009100\|Ga0075418_12830310	Not Available	530	Open in IMG/M
3300009147\|Ga0114129_12104554	Not Available	681	Open in IMG/M
3300009156\|Ga0111538_10559376	All Organisms → cellular organisms → Bacteria	1450	Open in IMG/M
3300009156\|Ga0111538_10972909	Not Available	1074	Open in IMG/M
3300009156\|Ga0111538_10992825	Not Available	1062	Open in IMG/M
3300009162\|Ga0075423_10850006	Not Available	966	Open in IMG/M
3300009162\|Ga0075423_11487978	Not Available	726	Open in IMG/M
3300009176\|Ga0105242_11536144	Not Available	697	Open in IMG/M
3300009177\|Ga0105248_10834339	Not Available	1040	Open in IMG/M
3300009840\|Ga0126313_11081540	Not Available	659	Open in IMG/M
3300010303\|Ga0134082_10197207	Not Available	824	Open in IMG/M
3300010371\|Ga0134125_10792951	All Organisms → cellular organisms → Bacteria	1042	Open in IMG/M
3300010399\|Ga0134127_12115412	Not Available	641	Open in IMG/M
3300010400\|Ga0134122_13177150	Not Available	514	Open in IMG/M
3300010403\|Ga0134123_11809332	Not Available	664	Open in IMG/M
3300011119\|Ga0105246_12105840	Not Available	547	Open in IMG/M
3300011443\|Ga0137457_1238224	All Organisms → cellular organisms → Bacteria	622	Open in IMG/M
3300012199\|Ga0137383_10857498	Not Available	663	Open in IMG/M
3300012204\|Ga0137374_10467202	Not Available	987	Open in IMG/M
3300012362\|Ga0137361_10541359	Not Available	1068	Open in IMG/M
3300012904\|Ga0157282_10302371	Not Available	564	Open in IMG/M
3300012925\|Ga0137419_11453027	Not Available	580	Open in IMG/M
3300012971\|Ga0126369_10012563	All Organisms → cellular organisms → Bacteria	6585	Open in IMG/M
3300013308\|Ga0157375_12167733	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	662	Open in IMG/M
3300014968\|Ga0157379_12286280	Not Available	538	Open in IMG/M
3300015262\|Ga0182007_10169923	Not Available	749	Open in IMG/M
3300015373\|Ga0132257_100150476	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → asterids → campanulids → Asterales → Asteraceae → Asteroideae → Anthemideae → Anthemidinae → Tanacetum → Tanacetum cinerariifolium	2727	Open in IMG/M
3300015373\|Ga0132257_103784340	Not Available	550	Open in IMG/M
3300015374\|Ga0132255_105855969	Not Available	520	Open in IMG/M
3300016404\|Ga0182037_11870319	Not Available	537	Open in IMG/M
3300016445\|Ga0182038_12084814	Not Available	514	Open in IMG/M
3300018054\|Ga0184621_10264091	Not Available	611	Open in IMG/M
3300018074\|Ga0184640_10490788	Not Available	542	Open in IMG/M
3300018468\|Ga0066662_12033325	Not Available	602	Open in IMG/M
3300018476\|Ga0190274_12777563	Not Available	586	Open in IMG/M
3300021080\|Ga0210382_10401292	Not Available	607	Open in IMG/M
3300025495\|Ga0207932_1006566	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	3696	Open in IMG/M
3300025906\|Ga0207699_11248979	Not Available	550	Open in IMG/M
3300025910\|Ga0207684_11022636	Not Available	690	Open in IMG/M
3300025910\|Ga0207684_11058370	Not Available	677	Open in IMG/M
3300025922\|Ga0207646_10501607	Not Available	1093	Open in IMG/M
3300025923\|Ga0207681_11855999	Not Available	502	Open in IMG/M
3300025925\|Ga0207650_11771879	Not Available	523	Open in IMG/M
3300025930\|Ga0207701_10211482	Not Available	1701	Open in IMG/M
3300025931\|Ga0207644_11552141	Not Available	556	Open in IMG/M
3300025934\|Ga0207686_11106141	Not Available	646	Open in IMG/M
3300025939\|Ga0207665_10864839	Not Available	716	Open in IMG/M
3300025940\|Ga0207691_11184425	Not Available	634	Open in IMG/M
3300025941\|Ga0207711_11349148	Not Available	655	Open in IMG/M
3300025961\|Ga0207712_10302664	Not Available	1313	Open in IMG/M
3300026023\|Ga0207677_11870599	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	557	Open in IMG/M
3300026118\|Ga0207675_102384299	Not Available	542	Open in IMG/M
3300026317\|Ga0209154_1036964	All Organisms → cellular organisms → Bacteria	2222	Open in IMG/M
3300026552\|Ga0209577_10183256	All Organisms → cellular organisms → Bacteria	1622	Open in IMG/M
3300026552\|Ga0209577_10713156	Not Available	566	Open in IMG/M
3300027869\|Ga0209579_10797120	Not Available	510	Open in IMG/M
3300027873\|Ga0209814_10146791	Not Available	1011	Open in IMG/M
3300027907\|Ga0207428_10573395	Not Available	815	Open in IMG/M
3300028293\|Ga0247662_1013477	Not Available	1315	Open in IMG/M
3300028380\|Ga0268265_10590105	Not Available	1060	Open in IMG/M
3300028380\|Ga0268265_12358661	Not Available	539	Open in IMG/M
3300028802\|Ga0307503_10448454	Not Available	684	Open in IMG/M
3300028803\|Ga0307281_10176587	Not Available	760	Open in IMG/M
3300028828\|Ga0307312_10206869	All Organisms → cellular organisms → Bacteria	1261	Open in IMG/M
3300028885\|Ga0307304_10277071	Not Available	736	Open in IMG/M
3300031231\|Ga0170824_116065347	Not Available	788	Open in IMG/M
3300031548\|Ga0307408_100654551	Not Available	940	Open in IMG/M
3300031716\|Ga0310813_11962108	Not Available	552	Open in IMG/M
3300031716\|Ga0310813_12118289	Not Available	532	Open in IMG/M
3300031740\|Ga0307468_102071302	Not Available	547	Open in IMG/M
3300031763\|Ga0318537_10323409	Not Available	570	Open in IMG/M
3300031764\|Ga0318535_10362014	Not Available	648	Open in IMG/M
3300032001\|Ga0306922_11534875	Not Available	665	Open in IMG/M
3300032174\|Ga0307470_10587484	Not Available	830	Open in IMG/M
3300032180\|Ga0307471_102471289	Not Available	657	Open in IMG/M
3300032421\|Ga0310812_10097702	All Organisms → cellular organisms → Bacteria	1204	Open in IMG/M
3300033412\|Ga0310810_11019629	Not Available	704	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	61.19%
Host-Associated	Host-Associated	38.81%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	57.46%
Plants	Host-Associated → Plants	38.81%
Aquatic	Environmental → Aquatic	3.73%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	57.46%
Rhizosphere	Host-Associated → Plants → Rhizosphere	28.36%
Rhizoplane	Host-Associated → Plants → Rhizoplane	8.96%
Sediment	Environmental → Aquatic → Sediment	2.99%
Roots	Host-Associated → Plants → Roots	1.49%
Freshwater	Environmental → Aquatic → Freshwater	0.75%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	41.79%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	23.13%
Loam	Environmental → Terrestrial → Soil → Loam	15.67%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	6.72%
Soil	Host-Associated → Plants → Rhizosphere → Soil	5.22%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.99%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.24%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	1.49%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.75%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	23.13%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	20.15%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	11.94%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	10.45%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	7.46%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	6.72%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	5.22%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.99%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.99%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	2.24%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.24%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.49%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	1.49%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.75%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.75%

Habitat	Taxonomy	Distribution
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	14.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	9.70%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	8.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	7.46%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	4.48%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	3.73%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.99%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.99%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.99%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	2.24%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.24%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.24%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.24%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	2.24%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.24%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.24%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.24%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	2.24%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.49%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.49%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.49%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.49%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.49%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.49%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	1.49%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.75%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.75%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.75%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.75%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.75%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.75%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.75%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.75%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.75%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.75%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.75%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.75%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.75%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.75%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.75%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001305	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300001431	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemly	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300011443	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT630_2	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012904	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S029-104C-1	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015262	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300018054	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1	Environmental	Open in IMG/M
3300018074	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b2	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300021080	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo	Environmental	Open in IMG/M
3300025495	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-2 deep-092012 (SPAdes)	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026317	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121 (SPAdes)	Environmental	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300027869	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300028293	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK03	Environmental	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028802	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 17_S	Environmental	Open in IMG/M
3300028803	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_120	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028885	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032421	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NN3	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M

Geographical Distribution

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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.49
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.49
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F059088

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1005526731	3300000364	Soil	MTLEQVRSKTERIREFSALPFLLVAAVSLLGAIYRPAPQIVTGGAINPGDVAW
INPhiseqgaiiFebDRAFT_1017920651	3300000364	Soil	MTLADVRSKTDRVREYSSIPFLLVAAISLAGALFRP
INPhiseqgaiiFebDRAFT_1055887343	3300000364	Soil	MTLEQVRSKTERIREFSALPFLLLASVSVLGAIYRGAPQTVIG
C688J14111_102505361	3300001305	Soil	MTLADVRSKTDRIREYKAIPFLLVAAVSLTGALFRPSPQAV
F14TB_1032576282	3300001431	Soil	MTLAQVRSKTERIREFSALPFLLVAGISVAGATFRXAPEIFRRLGA
Ga0062589_1021590332	3300004156	Soil	MTLATVRLNTKRIREFSALPFLLVAAVSIVGALYQPAPQAVTG
Ga0062592_1006530441	3300004480	Soil	MTLADVRSKTDRIREYSAIPFLLVAAVSLAGAFFRSEPQAAT
Ga0066673_103085292	3300005175	Soil	MTLARVRTTTDVIRGFRALPFMLVAGVSLLGAFYRPAPQAVTGGPLNSGDVAW
Ga0065705_104060821	3300005294	Switchgrass Rhizosphere	MTLAQVRSKTERIREFSALPFLLVAGISVAGALFRAAPQAVTGGPLVAGDV
Ga0065705_109305071	3300005294	Switchgrass Rhizosphere	MTLAQVRRKTERIREFSALPFLLVAGVSVLGALYRSAPQAVTGGPLNAGDVAWMLT
Ga0065707_104241661	3300005295	Switchgrass Rhizosphere	MTLAQVRSKTERIREFSALPFLLVAGISVAGALFRAAPQAVTGGPLVAGDVAWML
Ga0070690_1004244832	3300005330	Switchgrass Rhizosphere	MTLADVRSKTDRIREYSAIPFLLVAAVSVAGVLVRPAPQA
Ga0066388_1005104262	3300005332	Tropical Forest Soil	MTLEDVRSKTERIRGFSALPFLLLATVSLAGAFVRTAPQAVSGGPINTGDVAWMLT
Ga0066388_1027225652	3300005332	Tropical Forest Soil	MTLAQVRSKTERIREFSALPFILVAAVSLAGALFRPAPQAQTGGPINPGDVAWML
Ga0068869_1017311061	3300005334	Miscanthus Rhizosphere	MTLADVRSKTDRIREYPAIPFLLVAAVSVAGVLFRPEPQAVTGGPINAGDTAWML
Ga0070687_1015120971	3300005343	Switchgrass Rhizosphere	MTLAQVRSKTERFREISALPFLLVAGISVAGALFRAAPQAVTGG
Ga0070694_1016836021	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MTLAQVRRKTERFREFSALPFLLVALISLAGAVFRAAPQAVTGGP
Ga0070663_1012517292	3300005455	Corn Rhizosphere	MTLAQVRSKTERIREFSALPFLLVAGVSVAGALFHAAPQAVTGGPLVAG
Ga0070699_1012028681	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MTLAQVRSKTERFREFSALPFLLVAGISVAGALFRAAPQAVTGGALVAGDV
Ga0070697_1001446781	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MTLATVRRKTERIREFSALPFLLVAAVSVMGAFFRSAPQAVT
Ga0070697_1009933902	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MTLAQVRSKTERIREFSALPFLLLAVASMAGAFYRVAPQAVTGGPINTGDVAWMLTAT
Ga0066697_100909052	3300005540	Soil	MTLAQVRTKTDVIRGFTALPFMLVAAVSLLGAFYRPAPQAATGGPGGDWS*
Ga0070672_1002340341	3300005543	Miscanthus Rhizosphere	MTLAQVRSKTERFREFSALPFLLVAGISVAGALFRAAPQAVTGGPLVAGDVAWML
Ga0070672_1005975062	3300005543	Miscanthus Rhizosphere	MTLADVRSKTDRIREYSAIPFLLVAAVSLAGALFRSEPQAAT
Ga0070696_1008821882	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MTLATVRRKTERIREFSALPFLVIAAVSVAGAFVRQAPQTVTGGPINPGDVAWML
Ga0070696_1012664552	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MTLAQVRSKTERIREFSALPFLLLAAASLAGGFLRVAPQTVTGGPINAG
Ga0070704_1002771752	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	MTLATVRRNTERIREFSALPFVLVAAVSIAGAVFRPEPQAVTGGPISAGDVAWML
Ga0066700_100550292	3300005559	Soil	MTREQVRSKTERIREFAALPFLLMAVVSVLGVVVRPAAQPITGGPVN
Ga0066702_101611952	3300005575	Soil	MTLEQVRSKTERIREFTALPFLLLAVVSVLGVVVRPAAQPITGGPVNSG
Ga0068854_1008921701	3300005578	Corn Rhizosphere	MTLAAVRRKTERIREFSALPFLLVAAVSVAGALFHPAPQVATGGPINSGDLAWM
Ga0066706_104779251	3300005598	Soil	MTLAQERSTTERIWATLPFILIAAVSLAGAFYRPAAQA
Ga0068852_1013173881	3300005616	Corn Rhizosphere	MTLADVRSKTDRIREFSAIPFLLVAAVSVAGALFHGE
Ga0068859_1017633941	3300005617	Switchgrass Rhizosphere	MTLAGVRSKTDRIREYSAIPFLLVAAVSLAGALFRPA
Ga0066903_1062947661	3300005764	Tropical Forest Soil	MTLADVRSKTDRIREYPAIPFALVAAVSLAGALFRPAPPAVTGGPVNAGDTAWML
Ga0066903_1080248122	3300005764	Tropical Forest Soil	MTLATVRRKTERIREFSALPFLLLATVSLAGALFRTQPQT
Ga0068860_1013389162	3300005843	Switchgrass Rhizosphere	MTLATVRRGTERIRNFSALPFLLVAAVSLLGALFQPAAQAVT
Ga0066656_109739152	3300006034	Soil	MTLAQVRPKTAVIRGFTALPFMLVAAVSLLGAFYRPAPQAATGGPGGDWS*
Ga0066652_1018479941	3300006046	Soil	MTLAQVRSKTERIREFSALPFLLIAGISAAGALFRAAPQAVT
Ga0075417_105591512	3300006049	Populus Rhizosphere	MTLATVRRKTERIREFSALPFLLLAAVSVVGAVFRAAPP
Ga0075030_1015011391	3300006162	Watersheds	MTLEQVRSKTERIREFSAVPFVLVAMVSLAGALFRAEPQAVTGGPVNSGDTAWML
Ga0097621_1002849152	3300006237	Miscanthus Rhizosphere	MTLADVRSKTDRIREYSAIPFVLVALVSLAGALFRPEPQAVTGGP
Ga0097621_1023958562	3300006237	Miscanthus Rhizosphere	MTLADVRSKTDRIREYSSIPFLLVAAVSLAGALYRPAPQAVTGGPINAGDT
Ga0066653_105880612	3300006791	Soil	MTLATVRRKTERIREFSALPFLLIAAVSVVGAFVRQAPPVA
Ga0075433_117973582	3300006852	Populus Rhizosphere	MTSAQVRRKTERIREFSALPFLLVAGISLAGAIVRSAPQTVTGGPI
Ga0075425_1005026381	3300006854	Populus Rhizosphere	MTLEDVRSRTERIRGFSALPFLLLAAVSLAGAIVRTAPQSVTGGPINTGDVA
Ga0075425_1010350622	3300006854	Populus Rhizosphere	MTLATVRRKTERIREFSALPFLLVAAVSLAGALVKPAPPLVTGGPINA
Ga0075425_1015232032	3300006854	Populus Rhizosphere	MTLEQVRSKTERIREFSALPFLLIAAVSVFGALFSGAPQAVTGGPINAGDVAWML
Ga0075434_1006649341	3300006871	Populus Rhizosphere	MTLAQVKRKTEQIREFSALPFLLVAGVSLLGAFLRSAPQTT
Ga0075429_1010393802	3300006880	Populus Rhizosphere	MTLAQVRSKTERIREFSALPFLLVAGISAVGALFRVAPQAVTGGPLVAGDVAWMLT
Ga0075424_1008696491	3300006904	Populus Rhizosphere	MTLAQVRSKTERIREFSALPFLLLAAASVAGGFFRTAPQSVVGGPMN
Ga0075435_1002189442	3300007076	Populus Rhizosphere	MAVEQVKSKTGRIRDIAALPFLLMAAVSVLGVIVRPSPQQIAGGPVN
Ga0075435_1018176262	3300007076	Populus Rhizosphere	MTLEQVRSKTKRIREFSALPFLLVAGVSLLGALYRGAPQTVVGGAI
Ga0099791_104664491	3300007255	Vadose Zone Soil	MTLADVRSKTERIREFSALPFLLIATVSLAGAFFRSKPQAVSGGPVNPGDV
Ga0099793_101621121	3300007258	Vadose Zone Soil	MPTMTLATVRRKTERIREFSALPFLLVAAVSVMGAFFRSAPQAVTGGPVNTGDVAWM
Ga0066710_1032730321	3300009012	Grasslands Soil	MTLAQVRSKTERIREFSALPFLLVVAASIGGVLFRPAPQSPVGGPINPGDVAWMLTAT
Ga0111539_125810082	3300009094	Populus Rhizosphere	MTLAQVRRKTERIREFSALPFLLVALISVAGAVFRAAPQAVTGGPINPGDVAWML
Ga0105245_116144521	3300009098	Miscanthus Rhizosphere	MTLATVRRNTERIRELSALPFLLVAAVSVLGALFRPAAQAATGGPINAGDTA
Ga0075418_128303101	3300009100	Populus Rhizosphere	MTLAQVRRKTERFREFSALPFLLVALISLAGAVFRAAP
Ga0114129_121045542	3300009147	Populus Rhizosphere	MTLAQMRSKTERIREFSALPFLFVAGVSVLGAFYRGAPQTVTGGAINSGDVAWMLT
Ga0111538_105593762	3300009156	Populus Rhizosphere	MTLAQVRRKTERFREFSALPFLLVALISLAGAVFRAA
Ga0111538_109729091	3300009156	Populus Rhizosphere	MTLAQVRRKTERIREFSALPFLLVALISVAGAVFRAAPQAVTGGPINPGDV
Ga0111538_109928252	3300009156	Populus Rhizosphere	MTLAQVRSKTERIREFSALPFLLVAGISVAGALFRAAPQAVTGGALVAGDVAWMLT
Ga0075423_108500062	3300009162	Populus Rhizosphere	MTLAQVRRKTERFREFSALPFLLVALISLAGAVFRAAPQAVTGGPI
Ga0075423_114879782	3300009162	Populus Rhizosphere	MTLEQMRSKTVRIRGFSALPFLLIAGVSLLGAFLRPAPQTV
Ga0105242_115361442	3300009176	Miscanthus Rhizosphere	MTLTQVRRKTERIREFSALPFLLVALISVAGAVFRAAPQAV
Ga0105248_108343392	3300009177	Switchgrass Rhizosphere	MTLADVRSKTDRIREYSAIPFLLVAAVSLAGALFRPAAQAVTGGPINAGD
Ga0126313_110815401	3300009840	Serpentine Soil	MTLASVRRKTERIREFSALPFLLVAAVSVLGVLYRPAPQAVAGGPI
Ga0134082_101972071	3300010303	Grasslands Soil	MTLAQVRSKTERIREFSALPFLLIAAASLMGAFYRPAPQAVTGGP
Ga0134125_107929512	3300010371	Terrestrial Soil	MTLAMVRRKTERIREFSALPFLLVAAVSVAGALFR
Ga0134127_121154121	3300010399	Terrestrial Soil	MTLATVRRNTERIREFSALPFVLVAAVSIAGAVFRPEPQAVAGGPISAGDVAWMLTA
Ga0134122_131771502	3300010400	Terrestrial Soil	MTLATVRRRTERIREFSALPFVLVAAVSIAGAVFRPEP
Ga0134123_118093323	3300010403	Terrestrial Soil	MTLATVRRRTERIREFSALPFVLVAAVSIAGAVFRPEPQAVTGGPI
Ga0105246_121058402	3300011119	Miscanthus Rhizosphere	MTLEQVRSKTARIRTYRAVPFLLVAAVSAGGAMFRGAPQTVAGGPI
Ga0137457_12382242	3300011443	Soil	MTLATVRRKTERIREFSALPFLLVAAVSIAGAVFRPAPQAVTGGPISPGDVAWM
Ga0137383_108574982	3300012199	Vadose Zone Soil	MTLAQERSTTERICATLPFILIATVSLAGAFYRPAAQAVTGGPVNTGDVAWMLT
Ga0137374_104672022	3300012204	Vadose Zone Soil	MTLAQVRRKTERIREFSALPFLLVAAVSLAGAFFRAAPQAVTGGPLNSGDVAWML
Ga0137361_105413592	3300012362	Vadose Zone Soil	MTLAQERSTRERIWATLPFILIAAVSLAGAFYRPAAQAVTGGPVNTGDVAWMLTAT
Ga0157282_103023712	3300012904	Soil	MTLAQVRRKTERIREFSALPFLLVALVSLAGAVFRAAP
Ga0137419_114530272	3300012925	Vadose Zone Soil	MTLADVRSKTDRIREYPAIPFLLVAGVSLLGAFFRPAPQAVTGGPINAGDTAWM
Ga0126369_100125632	3300012971	Tropical Forest Soil	MTLATVRQKTERIREFSALPFLLIIAASLGGALFRSQPQTVAAVR*
Ga0157375_121677331	3300013308	Miscanthus Rhizosphere	MTLADVRSKTDRIREYSAIPFVLVALVSLAGALFRPEPQAVTGGPINAGDTA
Ga0157379_122862802	3300014968	Switchgrass Rhizosphere	MTLATVRRNTERIRELSALPFLLVAAVSVLGALFRPAAQAATGGPINAGDTAWMLT
Ga0182007_101699232	3300015262	Rhizosphere	MTLADVRSKTERIREFSALPFLLVAAVSLAGALFRPQPQSVTGGPINAGD
Ga0132257_1001504762	3300015373	Arabidopsis Rhizosphere	MTLEQVRSKTERIREFSALPFLLVAAVSLLGAIYRPAGQIVTGG
Ga0132257_1037843401	3300015373	Arabidopsis Rhizosphere	MTLAQVKRKTERFREFSALPFLLVALISVAGVVFRTAPQAVTGG
Ga0132255_1058559691	3300015374	Arabidopsis Rhizosphere	MTLAQVRSKTERIREFSALPFLLVAGISVAGALVRAA
Ga0182037_118703192	3300016404	Soil	MTLEQVRSKTGRIREFSALPFLLVATVSLLGAFFRAQPQTVTGGPVNTG
Ga0182038_120848141	3300016445	Soil	MTLADVRSKTDRIREYPAIPFVLVAAVSLAGALFRPAPQAVT
Ga0184621_102640912	3300018054	Groundwater Sediment	MTLAQVRSKTERIREFSALPFLVLAGVSVAGAFFRSAPQTVTGGPLVA
Ga0184640_104907881	3300018074	Groundwater Sediment	MTLAQVRSKTERIREFSALPFLLVAGISAAGAFFRAAPQAVTGGP
Ga0066662_120333251	3300018468	Grasslands Soil	MTLAQVRSKTERIREFSALPFLLVVAASVGGAFFRPAPQAVVGGPINP
Ga0190274_127775631	3300018476	Soil	MTLEQVRSKTERIREFSALPFLLLASISVLGALFRGAPQVVTGGPINSGDVA
Ga0210382_104012921	3300021080	Groundwater Sediment	MTLATVRRNTERIREFSALPFLLVAAVSVVGALYQPAAQAVTGG
Ga0207932_10065663	3300025495	Arctic Peat Soil	MTLAMVRRKTERIREFSAIPFLLIAGVSLLGAFFRPAPQTTTGGPVST
Ga0207699_112489792	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MTLAMVRRKTERIREFSAFPFLLLAAVSLAGAFVRPQPQAVTGGPVNAGDVAWMLPAT
Ga0207684_110226362	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MTLAQVRSKAERIREFSALPFLLVAGVSVAGAVFRA
Ga0207684_110583702	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MTLEQVRSKTKRIREFTALPFLLMAVVSVLGVVVRPAAQPTAGGPVNSGDV
Ga0207646_105016072	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MTLAMVRRKTERIREFSALPFLLVAAVSVAGAWLRPQPQAMTGGPVNAG
Ga0207681_118559992	3300025923	Switchgrass Rhizosphere	MTLATVRRGTERIREFSALPFLLVAAVSIGGVLFRPAPQAVTGGPISAG
Ga0207650_117718791	3300025925	Switchgrass Rhizosphere	MTLADVRSKTDRIREYSAIPFLLVAAVSLAGAIVR
Ga0207701_102114825	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	MTLAQVRRKTERIREFSALPFLLLAGVSVLGAVLRSAPQTVTGGPLNTGD
Ga0207644_115521411	3300025931	Switchgrass Rhizosphere	MTLATVRRKTERIREFSALPFLLVAAVSVAGALFRPQPQS
Ga0207686_111061412	3300025934	Miscanthus Rhizosphere	MTLATVRRNTERIREFSALPFVLVAAVSIAGAVFRP
Ga0207665_108648391	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MTLADVRSKTDRIREYSAIPFLLVAAVSVAGVLFRPAPQAVTGGPINAG
Ga0207691_111844252	3300025940	Miscanthus Rhizosphere	MTLADVRSKTDRIREYSAIPFLLVAAVSLAGALFRSEPQAATGGPINAG
Ga0207711_113491481	3300025941	Switchgrass Rhizosphere	MTLATVRRNTERIREFSALPFLLVAVVSIAGAVSRPAPQAVTGGPISAGDVAW
Ga0207712_103026641	3300025961	Switchgrass Rhizosphere	MTLATVRRGTERIREFSALPFLLVAAVSIGGVLFRPAPQTVTGGPISAGD
Ga0207677_118705992	3300026023	Miscanthus Rhizosphere	LRNQVRSKTERIREFSALPFLLVAGVSVAGALFHAAPQAVTGGPL
Ga0207675_1023842992	3300026118	Switchgrass Rhizosphere	MTLAQVRRNTERIREFSALPFLLVAGVSVLGALYRSAPQAVTGGPLNAGDVAWMLTA
Ga0209154_10369642	3300026317	Soil	MTLEQMRSKTERIREFAALPFLLMAVVSVLGVVVRPAAQPITGGPVN
Ga0209577_101832562	3300026552	Soil	MTLATVRRKTERIREFSALPFLLIAAVSVAGALVQPAPPAR
Ga0209577_107131561	3300026552	Soil	MTLEQVRSKTERIREFTALPFLLLAVVSVLGVVVRPAAQPI
Ga0209579_107971202	3300027869	Surface Soil	MTLSQVRSKTERIREFSALPFLLVVAASLAGALFRPQP
Ga0209814_101467912	3300027873	Populus Rhizosphere	MTLAQVRSKTERIREFSALPFLLVAGISVLGALFRAAPQA
Ga0207428_105733952	3300027907	Populus Rhizosphere	MTLAQVRSKTERIREFSALPFLLVAGISVAGALFRAAPQAVTGGALVAGDV
Ga0247662_10134771	3300028293	Soil	MTLADVRTKTDRIREYSAIPFLLVAAVSLAGALFRPAA
Ga0268265_105901051	3300028380	Switchgrass Rhizosphere	MTLATVRRNTERIREFSALPFVLVAAVSIAGAVFRPEPQA
Ga0268265_123586611	3300028380	Switchgrass Rhizosphere	MTLAQVRRKTERIREFSALPFLAVAGVSVLGAVYRSAPAPVTGGPLNA
Ga0307503_104484541	3300028802	Soil	MTLADVRTKTDRIREYSAIPFLLVATVSLAGALFRPA
Ga0307281_101765872	3300028803	Soil	MTLATVRRNTERIRELSALPFLLIAAVSVLGALFRPAA
Ga0307312_102068691	3300028828	Soil	MTLATVRRKTERIREFSALPFLLIAVVSLLGAFYRTAPQTV
Ga0307304_102770712	3300028885	Soil	MTLATVRRSTERIREFSALPFLLVAAVSLAGALFRPAPQAVTGGPISA
Ga0170824_1160653472	3300031231	Forest Soil	MTLETVRRNTGRIRELSALPFVVVAAVSLLGALYKPAPQTIAGGPINSGDVAWMLT
Ga0307408_1006545511	3300031548	Rhizosphere	MTLAQVRSKTERIRQFSALPFLLVAGISAVGAFFRVAPQAVTGGPLVAGDVAWMLT
Ga0310813_119621081	3300031716	Soil	MTLAMVRRKTERIRAFSALPFLLIAAVSLGGALFRPQPQSVTGGPINAGDVAWMLTA
Ga0310813_121182891	3300031716	Soil	MTLAQVRRKTERIREFSAFPFLLVAAVSVVGAFFRPAPQTVTGGPINP
Ga0307468_1020713021	3300031740	Hardwood Forest Soil	MTLATVRRNTERIRELSALPFLLVAAVSVLGALFRPAAQAVTGGAINAGDTAWMLTAT
Ga0318537_103234091	3300031763	Soil	MTLEQVRSKTGRIREFSALPFLLVATVSLLGAFFRAQPQTVTGGPVNTGDVAWML
Ga0318535_103620142	3300031764	Soil	MTLEQVRSKTGRIREFSALPFLLVATVSLLGAFFRAQPQTVTGGPVNTGDVAWM
Ga0306922_115348751	3300032001	Soil	MTLEQVRSKTGRIREFSALPFLLVATVSLLGAFFRAQPQTVTGGPVN
Ga0307470_105874841	3300032174	Hardwood Forest Soil	MTLEQVRSKTERIREFSALPFLIVAGVSVLGAVFRG
Ga0307471_1024712892	3300032180	Hardwood Forest Soil	MTLAMVRRKTERIREFSALPFLLIAAVSVAGALVRPAPQTVTGGPINPGDVA
Ga0310812_100977022	3300032421	Soil	MTLADVRSKTDRIREYSAIPFLLVAAVSVAGAFFRSEPQAVTGGPINAGDTAWML
Ga0310810_110196292	3300033412	Soil	MTLAMVRRKTERIRAFSALPFLLIAAVSLGGALFRPQPQSVTG

Hidden Markov Model


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