Metagenome / Metatranscriptome Family F059043

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F059043
Family Type	Metagenome / Metatranscriptome
Number of Sequences	134
Average Sequence Length	67 residues
Representative Sequence	MYRYPTEQLMTVEEAERLSELHTGRARRKQQPRQPSLWAWQSVSGALEQTVTEAQVDEAIRTLRLR
Number of Associated Samples	106
Number of Associated Scaffolds	134

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	83.46 %
% of genes near scaffold ends (potentially truncated)	27.61 %
% of genes from short scaffolds (< 2000 bps)	78.36 %
Associated GOLD sequencing projects	98
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.25

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (79.851 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (16.418 % of family members)
Environment Ontology (ENVO)	Unclassified (34.328 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (49.254 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 32.98% β-sheet: 0.00% Coil/Unstructured: 67.02%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.25
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.25
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 134 Family Scaffolds
PF02472	ExbD	32.84
PF00144	Beta-lactamase	9.70
PF00565	SNase	6.72
PF07676	PD40	3.73
PF13365	Trypsin_2	2.24
PF13180	PDZ_2	0.75
PF13532	2OG-FeII_Oxy_2	0.75
PF00202	Aminotran_3	0.75
PF00291	PALP	0.75
PF04205	FMN_bind	0.75
PF00196	GerE	0.75
PF13602	ADH_zinc_N_2	0.75
PF01940	DUF92	0.75

COG ID	Name	Functional Category	% Frequency in 134 Family Scaffolds
COG0848	Biopolymer transport protein ExbD	Intracellular trafficking, secretion, and vesicular transport [U]	32.84
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	9.70
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	9.70
COG2367	Beta-lactamase class A	Defense mechanisms [V]	9.70
COG1836	Cytidylyltransferase family enzyme	General function prediction only [R]	0.75

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	79.85 %
Unclassified	root	N/A	20.15 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	79.85 %
Unclassified	root	N/A	20.15 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	79.85 %
Unclassified	root	N/A	20.15 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	77.61 %
Unclassified	root	N/A	20.15 %

Name	Rank	Taxonomy	Distribution
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	20.90 %
Unclassified	root	N/A	20.15 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	14.18 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	20.15 %
Nevskiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales	16.42 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	1.49 %
Hyphomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomonadales	1.49 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	20.15 %
Steroidobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae	16.42 %
Hyphomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomonadales → Hyphomonadaceae	1.49 %
Xanthomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae	1.49 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	20.15 %
Povalibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Povalibacter	16.42 %
unclassified Xanthomonadaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → unclassified Xanthomonadaceae	1.49 %
Hyphomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomonadales → Hyphomonadaceae → Hyphomonas	0.75 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	20.15 %
Povalibacter uvarum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Povalibacter → Povalibacter uvarum	16.42 %
Xanthomonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → unclassified Xanthomonadaceae → Xanthomonadaceae bacterium	1.49 %
Hyphomonas oceanitis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomonadales → Hyphomonadaceae → Hyphomonas → Hyphomonas oceanitis	0.75 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.75 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090015\|GPICI_9133826	All Organisms → cellular organisms → Bacteria → Proteobacteria	2922	Open in IMG/M
2088090015\|GPICI_9246365	All Organisms → cellular organisms → Bacteria → Proteobacteria	9713	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_105859519	Not Available	522	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_105861810	All Organisms → cellular organisms → Bacteria → Proteobacteria	1401	Open in IMG/M
3300000559\|F14TC_102961806	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1218	Open in IMG/M
3300000789\|JGI1027J11758_12364907	Not Available	500	Open in IMG/M
3300000890\|JGI11643J12802_12102917	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Povalibacter → Povalibacter uvarum	782	Open in IMG/M
3300000891\|JGI10214J12806_10453596	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Povalibacter → Povalibacter uvarum	638	Open in IMG/M
3300000953\|JGI11615J12901_10310151	All Organisms → cellular organisms → Bacteria → Proteobacteria	678	Open in IMG/M
3300000956\|JGI10216J12902_105613280	Not Available	736	Open in IMG/M
3300000956\|JGI10216J12902_123916266	Not Available	522	Open in IMG/M
3300003267\|soilL1_10002033	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	7417	Open in IMG/M
3300004114\|Ga0062593_101781882	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Povalibacter → Povalibacter uvarum	676	Open in IMG/M
3300004153\|Ga0063455_100205996	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	979	Open in IMG/M
3300004463\|Ga0063356_100036410	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	4808	Open in IMG/M
3300004463\|Ga0063356_101039306	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomonadales → Hyphomonadaceae → Hyphomonas → Hyphomonas oceanitis	1174	Open in IMG/M
3300004463\|Ga0063356_105149019	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Povalibacter → Povalibacter uvarum	561	Open in IMG/M
3300004463\|Ga0063356_106317961	All Organisms → cellular organisms → Bacteria → Proteobacteria	508	Open in IMG/M
3300004479\|Ga0062595_100069712	All Organisms → cellular organisms → Bacteria → Proteobacteria	1719	Open in IMG/M
3300004480\|Ga0062592_100047551	All Organisms → cellular organisms → Bacteria → Proteobacteria	2300	Open in IMG/M
3300004643\|Ga0062591_102437261	All Organisms → cellular organisms → Bacteria → Proteobacteria	549	Open in IMG/M
3300004798\|Ga0058859_11493452	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Povalibacter → Povalibacter uvarum	586	Open in IMG/M
3300005168\|Ga0066809_10180813	Not Available	561	Open in IMG/M
3300005331\|Ga0070670_101631404	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Povalibacter → Povalibacter uvarum	593	Open in IMG/M
3300005332\|Ga0066388_104556452	All Organisms → cellular organisms → Bacteria → Proteobacteria	706	Open in IMG/M
3300005333\|Ga0070677_10081452	All Organisms → cellular organisms → Bacteria → Proteobacteria	1386	Open in IMG/M
3300005334\|Ga0068869_100050045	All Organisms → cellular organisms → Bacteria → Proteobacteria	3027	Open in IMG/M
3300005335\|Ga0070666_11357050	Not Available	531	Open in IMG/M
3300005336\|Ga0070680_101160232	Not Available	668	Open in IMG/M
3300005347\|Ga0070668_101206394	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Povalibacter → Povalibacter uvarum	686	Open in IMG/M
3300005366\|Ga0070659_100398880	All Organisms → cellular organisms → Bacteria → Proteobacteria	1161	Open in IMG/M
3300005406\|Ga0070703_10345211	All Organisms → cellular organisms → Bacteria → Proteobacteria	634	Open in IMG/M
3300005471\|Ga0070698_101765333	Not Available	571	Open in IMG/M
3300005577\|Ga0068857_100679855	All Organisms → cellular organisms → Bacteria → Proteobacteria	977	Open in IMG/M
3300005618\|Ga0068864_100946651	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	852	Open in IMG/M
3300005841\|Ga0068863_102389201	Not Available	538	Open in IMG/M
3300005843\|Ga0068860_101001430	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	854	Open in IMG/M
3300005937\|Ga0081455_10583858	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Povalibacter → Povalibacter uvarum	732	Open in IMG/M
3300006358\|Ga0068871_100021851	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4926	Open in IMG/M
3300006844\|Ga0075428_100003819	All Organisms → cellular organisms → Bacteria → Proteobacteria	16532	Open in IMG/M
3300006844\|Ga0075428_100170645	All Organisms → cellular organisms → Bacteria → Proteobacteria	2358	Open in IMG/M
3300006844\|Ga0075428_101176527	All Organisms → cellular organisms → Bacteria → Proteobacteria	809	Open in IMG/M
3300006844\|Ga0075428_102308660	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Povalibacter → Povalibacter uvarum	554	Open in IMG/M
3300006845\|Ga0075421_101839739	Not Available	650	Open in IMG/M
3300006846\|Ga0075430_100048748	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3576	Open in IMG/M
3300006846\|Ga0075430_100103193	All Organisms → cellular organisms → Bacteria → Proteobacteria	2381	Open in IMG/M
3300006846\|Ga0075430_100650723	All Organisms → cellular organisms → Bacteria → Proteobacteria	869	Open in IMG/M
3300006847\|Ga0075431_100644173	All Organisms → cellular organisms → Bacteria → Proteobacteria	1041	Open in IMG/M
3300006847\|Ga0075431_101372281	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Povalibacter → Povalibacter uvarum	667	Open in IMG/M
3300006854\|Ga0075425_102696567	All Organisms → cellular organisms → Bacteria → Proteobacteria	548	Open in IMG/M
3300006894\|Ga0079215_10536205	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → unclassified Xanthomonadaceae → Xanthomonadaceae bacterium	742	Open in IMG/M
3300006894\|Ga0079215_11091073	Not Available	597	Open in IMG/M
3300006904\|Ga0075424_102254829	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Povalibacter → Povalibacter uvarum	573	Open in IMG/M
3300006918\|Ga0079216_10355476	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	897	Open in IMG/M
3300007004\|Ga0079218_10456633	All Organisms → cellular organisms → Bacteria → Proteobacteria	1112	Open in IMG/M
3300007004\|Ga0079218_10884169	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Povalibacter → Povalibacter uvarum	874	Open in IMG/M
3300009094\|Ga0111539_10049684	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5000	Open in IMG/M
3300009094\|Ga0111539_10124765	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3017	Open in IMG/M
3300009094\|Ga0111539_11097120	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Povalibacter → Povalibacter uvarum	925	Open in IMG/M
3300009100\|Ga0075418_10029155	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	6013	Open in IMG/M
3300009147\|Ga0114129_13431120	Not Available	509	Open in IMG/M
3300010042\|Ga0126314_11387117	Not Available	528	Open in IMG/M
3300010166\|Ga0126306_11491276	All Organisms → cellular organisms → Bacteria → Proteobacteria	561	Open in IMG/M
3300010362\|Ga0126377_12069019	All Organisms → cellular organisms → Bacteria → Proteobacteria	645	Open in IMG/M
3300010373\|Ga0134128_10467487	All Organisms → cellular organisms → Bacteria	1407	Open in IMG/M
3300010400\|Ga0134122_11208838	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Povalibacter → Povalibacter uvarum	757	Open in IMG/M
3300010400\|Ga0134122_12220549	All Organisms → cellular organisms → Bacteria → Proteobacteria	593	Open in IMG/M
3300010401\|Ga0134121_10192442	All Organisms → cellular organisms → Bacteria	1761	Open in IMG/M
3300010403\|Ga0134123_10448816	All Organisms → cellular organisms → Bacteria	1198	Open in IMG/M
3300012469\|Ga0150984_112918120	Not Available	818	Open in IMG/M
3300012896\|Ga0157303_10105037	All Organisms → cellular organisms → Bacteria → Proteobacteria	691	Open in IMG/M
3300012905\|Ga0157296_10236362	Not Available	605	Open in IMG/M
3300012906\|Ga0157295_10109132	All Organisms → cellular organisms → Bacteria → Proteobacteria	772	Open in IMG/M
3300012913\|Ga0157298_10171034	All Organisms → cellular organisms → Bacteria → Proteobacteria	670	Open in IMG/M
3300013297\|Ga0157378_10079870	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2954	Open in IMG/M
3300015371\|Ga0132258_10142767	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	5732	Open in IMG/M
3300015374\|Ga0132255_104016877	Not Available	624	Open in IMG/M
3300017792\|Ga0163161_10133328	All Organisms → cellular organisms → Bacteria → Proteobacteria	1876	Open in IMG/M
3300018422\|Ga0190265_10067028	All Organisms → cellular organisms → Bacteria → Proteobacteria	3220	Open in IMG/M
3300018422\|Ga0190265_10876390	Not Available	1020	Open in IMG/M
3300018429\|Ga0190272_10171847	All Organisms → cellular organisms → Bacteria → Proteobacteria	1525	Open in IMG/M
3300018429\|Ga0190272_12489918	All Organisms → cellular organisms → Bacteria → Proteobacteria	563	Open in IMG/M
3300018465\|Ga0190269_12028618	Not Available	502	Open in IMG/M
3300018466\|Ga0190268_10142381	All Organisms → cellular organisms → Bacteria → Proteobacteria	1208	Open in IMG/M
3300018476\|Ga0190274_10335229	All Organisms → cellular organisms → Bacteria → Proteobacteria	1429	Open in IMG/M
3300018476\|Ga0190274_10683271	All Organisms → cellular organisms → Bacteria → Proteobacteria	1068	Open in IMG/M
3300019360\|Ga0187894_10054570	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2322	Open in IMG/M
3300019361\|Ga0173482_10051531	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1339	Open in IMG/M
3300019362\|Ga0173479_10888215	Not Available	503	Open in IMG/M
3300019377\|Ga0190264_10055038	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1627	Open in IMG/M
3300022880\|Ga0247792_1047036	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Povalibacter → Povalibacter uvarum	797	Open in IMG/M
3300025711\|Ga0207696_1084786	All Organisms → cellular organisms → Bacteria → Proteobacteria	872	Open in IMG/M
3300025903\|Ga0207680_11208262	Not Available	539	Open in IMG/M
3300025914\|Ga0207671_11141561	Not Available	611	Open in IMG/M
3300025919\|Ga0207657_10375838	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1119	Open in IMG/M
3300025921\|Ga0207652_11134813	All Organisms → cellular organisms → Bacteria → Proteobacteria	683	Open in IMG/M
3300025926\|Ga0207659_10952386	All Organisms → cellular organisms → Bacteria → Proteobacteria	738	Open in IMG/M
3300026088\|Ga0207641_10662542	Not Available	1026	Open in IMG/M
3300026116\|Ga0207674_10602239	All Organisms → cellular organisms → Bacteria → Proteobacteria	1061	Open in IMG/M
3300026142\|Ga0207698_12003303	Not Available	593	Open in IMG/M
3300027880\|Ga0209481_10000154	All Organisms → cellular organisms → Bacteria → Proteobacteria	29268	Open in IMG/M
3300027880\|Ga0209481_10099848	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Povalibacter → Povalibacter uvarum	1401	Open in IMG/M
3300027886\|Ga0209486_10121674	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1409	Open in IMG/M
3300027886\|Ga0209486_10595434	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Povalibacter → Povalibacter uvarum	700	Open in IMG/M
3300027909\|Ga0209382_10000177	All Organisms → cellular organisms → Bacteria → Proteobacteria	102017	Open in IMG/M
3300027909\|Ga0209382_11003755	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → unclassified Xanthomonadaceae → Xanthomonadaceae bacterium	870	Open in IMG/M
3300027909\|Ga0209382_12331985	Not Available	502	Open in IMG/M
3300028379\|Ga0268266_10833665	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Povalibacter → Povalibacter uvarum	891	Open in IMG/M
3300028597\|Ga0247820_10280649	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomonadales → Hyphomonadaceae	1085	Open in IMG/M
3300028608\|Ga0247819_10550911	All Organisms → cellular organisms → Bacteria → Proteobacteria	688	Open in IMG/M
3300028809\|Ga0247824_10716150	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Povalibacter → Povalibacter uvarum	611	Open in IMG/M
3300031456\|Ga0307513_10978781	Not Available	555	Open in IMG/M
3300031538\|Ga0310888_10189785	All Organisms → cellular organisms → Bacteria → Proteobacteria	1123	Open in IMG/M
3300031547\|Ga0310887_10041544	All Organisms → cellular organisms → Bacteria → Proteobacteria	2006	Open in IMG/M
3300031547\|Ga0310887_10343216	All Organisms → cellular organisms → Bacteria → Proteobacteria	864	Open in IMG/M
3300031548\|Ga0307408_100114306	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2079	Open in IMG/M
3300031548\|Ga0307408_102221752	All Organisms → cellular organisms → Bacteria → Proteobacteria	530	Open in IMG/M
3300031731\|Ga0307405_11576996	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Povalibacter → Povalibacter uvarum	579	Open in IMG/M
3300031824\|Ga0307413_10743086	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Povalibacter → Povalibacter uvarum	819	Open in IMG/M
3300031854\|Ga0310904_10027641	All Organisms → cellular organisms → Bacteria → Proteobacteria	2598	Open in IMG/M
3300031854\|Ga0310904_11075970	All Organisms → cellular organisms → Bacteria → Proteobacteria	575	Open in IMG/M
3300031901\|Ga0307406_10137786	All Organisms → cellular organisms → Bacteria → Proteobacteria	1723	Open in IMG/M
3300031911\|Ga0307412_10094545	All Organisms → cellular organisms → Bacteria → Proteobacteria	2099	Open in IMG/M
3300031911\|Ga0307412_11148837	All Organisms → cellular organisms → Bacteria → Proteobacteria	693	Open in IMG/M
3300032000\|Ga0310903_10507673	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Povalibacter → Povalibacter uvarum	630	Open in IMG/M
3300032002\|Ga0307416_100827427	All Organisms → cellular organisms → Bacteria → Proteobacteria	1023	Open in IMG/M
3300032005\|Ga0307411_10105228	All Organisms → cellular organisms → Bacteria → Proteobacteria	2006	Open in IMG/M
3300032075\|Ga0310890_11727957	All Organisms → cellular organisms → Bacteria → Proteobacteria	519	Open in IMG/M
3300032174\|Ga0307470_10897172	Not Available	696	Open in IMG/M
3300032179\|Ga0310889_10023105	All Organisms → cellular organisms → Bacteria → Proteobacteria	2196	Open in IMG/M
3300032421\|Ga0310812_10012624	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2846	Open in IMG/M
3300033412\|Ga0310810_10062017	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4530	Open in IMG/M
3300034820\|Ga0373959_0128969	All Organisms → cellular organisms → Bacteria → Proteobacteria	624	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	51.49%
Host-Associated	Host-Associated	48.51%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	51.49%
Plants	Host-Associated → Plants	47.01%
Human	Host-Associated → Human	0.75%
Arthropoda	Host-Associated → Arthropoda	0.75%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	50.75%
Rhizosphere	Host-Associated → Plants → Rhizosphere	33.58%
Rhizoplane	Host-Associated → Plants → Rhizoplane	11.94%
Roots	Host-Associated → Plants → Roots	1.49%
Cave	Environmental → Terrestrial → Cave	0.75%
Digestive System	Host-Associated → Human → Digestive System	0.75%
Symbiotic Fungal Gardens And Galleries	Host-Associated → Arthropoda → Symbiotic Fungal Gardens And Galleries	0.75%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	45.52%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	25.37%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	10.45%
Soil	Host-Associated → Plants → Rhizosphere → Soil	8.21%
Loam	Environmental → Terrestrial → Soil → Loam	5.22%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.49%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.75%
Large Intestine	Host-Associated → Human → Digestive System → Large Intestine	0.75%
Fungus Garden	Host-Associated → Arthropoda → Symbiotic Fungal Gardens And Galleries → Fungus Garden	0.75%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.75%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.75%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	25.37%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	19.40%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	10.45%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	9.70%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	8.21%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	8.21%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	7.46%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.99%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.49%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.49%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.75%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.75%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.75%
Fecal	Host-Associated → Human → Digestive System → Large Intestine → Fecal	0.75%
Unclassified	Host-Associated → Arthropoda → Symbiotic Fungal Gardens And Galleries → Fungus Garden → Unclassified	0.75%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.75%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.75%

Habitat	Taxonomy	Distribution
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	16.42%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	12.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	8.21%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	7.46%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	6.72%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	5.22%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	3.73%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	3.73%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.99%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.99%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	2.99%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.24%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	1.49%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.49%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.49%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.49%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.49%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.49%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.49%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.75%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.75%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	0.75%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.75%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.75%
Microbial Mat On Rocks	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Microbial Mat On Rocks	0.75%
Host-Associated	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated	0.75%
Fungus Garden	Host-Associated → Arthropoda → Symbiotic Fungal Gardens And Galleries → Fungus Garden → Unclassified → Fungus Garden	0.75%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.75%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.75%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.75%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.75%
Ectomycorrhiza	Host-Associated → Plants → Roots → Unclassified → Unclassified → Ectomycorrhiza	0.75%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.75%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.75%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.75%
Rhizosphere Soil	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil	0.75%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.75%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2040502000	Fungus garden microbial communities from Atta colombica in Panama - dump bottom	Host-Associated	Open in IMG/M
2088090015	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300000789	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000890	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000891	Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soil	Environmental	Open in IMG/M
3300000953	Soil microbial communities from Great Prairies - Kansas Corn soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300003267	Sugarcane bulk soil Sample L1	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300004798	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-2 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300005168	Soil and rhizosphere microbial communities from Laval, Canada - mgLPC	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005333	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG	Host-Associated	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005406	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006894	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control	Environmental	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006918	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100	Environmental	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012896	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S118-311C-2	Environmental	Open in IMG/M
3300012905	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S013-104B-2	Environmental	Open in IMG/M
3300012906	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S212-509R-1	Environmental	Open in IMG/M
3300012913	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S043-104R-2	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018429	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300019360	White microbial mat communities from a lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - GBC170108-1 metaG	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300019362	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)	Environmental	Open in IMG/M
3300019377	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 T	Environmental	Open in IMG/M
3300022880	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S106-311C-6	Environmental	Open in IMG/M
3300025711	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027880	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)	Host-Associated	Open in IMG/M
3300027886	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost (SPAdes)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028597	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day14	Environmental	Open in IMG/M
3300028608	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Xylose_Day6	Environmental	Open in IMG/M
3300028809	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_PalmiticAcid_Day48	Environmental	Open in IMG/M
3300031456	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM	Host-Associated	Open in IMG/M
3300031538	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1	Environmental	Open in IMG/M
3300031547	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4	Environmental	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031731	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1	Host-Associated	Open in IMG/M
3300031824	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2	Host-Associated	Open in IMG/M
3300031854	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1	Environmental	Open in IMG/M
3300031901	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2	Host-Associated	Open in IMG/M
3300031911	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1	Host-Associated	Open in IMG/M
3300032000	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D3	Environmental	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032005	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1	Host-Associated	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032179	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D2	Environmental	Open in IMG/M
3300032421	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NN3	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M
3300034820	Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_2	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ACODB_15167450	2040502000	Fungus Garden	MTVEEAERLSELHTGRARRKQQPRQPSLWAWQSVSGALEQTVTEQQVDEALRSQDR
GPICI_00421460	2088090015	Soil	MNRYPSEQLMTVEEAERLSELHTGRKRRKQPIRQPSLWAWQSVSEVLDREDCNPKSGCPRLLPS
GPICI_00832800	2088090015	Soil	MNRYPGEQLMSVEEAERLSELHTGRRRRKQPARQPSLWAWQSVSGALEQTVTEEQVDEMMRTLRR
INPhiseqgaiiFebDRAFT_1058595192	3300000364	Soil	MYRYPXEQXMTVEEAERLSELHTGRARRKQQPRQPSLWAWQSVSGSLEQTVTEAQVDEVIRTQRLR*
INPhiseqgaiiFebDRAFT_1058618103	3300000364	Soil	MNRYPSEQLMTVEEAERLSELHTGRNRRKQPVRQPSLWVWQSVPSALEQTVTEQQVDQLQSKSGCPRLLPS*
F14TC_1029618061	3300000559	Soil	MYRYPSEQLMTVEEAERLSELHTGRARRKQQPRQPSLWAWQSVSGALEQTVTEAQVDEMMRQLRSQDR*
JGI1027J11758_123649071	3300000789	Soil	MYRYPSEQLMTVEEAERLSELHTGRARRKQQPRQPSLWAWQSVSGSLEQTVTEAQVDEVIRTQRLR*
JGI11643J12802_121029171	3300000890	Soil	EQLMTVEEAERLSELHTGRKRRKQPIRQPSLWAWQSVSEVLDREDCNPKSGCPRLLPS*
JGI10214J12806_104535961	3300000891	Soil	EQLMTVEEAERLSELHTGRTRRKQQPRQPSLWAWQSVSGALEQTVTEAQVDEMMRQLQSQDR*
JGI11615J12901_103101512	3300000953	Soil	MYRYPSEQLMTVEEAERLSELHTGRKRRKQQPRQPSLWAWQSVSGALEQTVTEAQFDVLKSGCPRLLPR*
JGI10216J12902_1056132802	3300000956	Soil	MDLEGCAMYRYPTEQLMTVEEAERLSGLHTGRQRRKQPARQPSLWVWQSVAGALEQTVSEAQVEEMMRTLRDPKR*
JGI10216J12902_1239162661	3300000956	Soil	MYRYPSEQLMTVEEAERLSELHTGRTRRKQQPRQPSLWAWQSVSGALEQTVTEAQVDDLNSGCPRLLPR*
soilL1_100020334	3300003267	Sugarcane Root And Bulk Soil	MYRYPAEQLLTVDEAERLSELHTGRPRRKQQPRQPSLWAWQSVSGALEQTVTEAQVDEMIRTLRPR*
Ga0062593_1017818821	3300004114	Soil	VEEAERLSELHTGRTRRKQQPRQPSLWAWQSVSGALEQTVTEAQVDDLKSGCPRLLPR*
Ga0063455_1002059963	3300004153	Soil	MYRYPTEQLMTVEEAERLSELHTGRARRKQQPRQPSLWVWQSVSGALEQTVTEAQVDEMTRKLRLG*
Ga0063356_1000364101	3300004463	Arabidopsis Thaliana Rhizosphere	EQLMTVEEAERLSELHTGRTRRKQQPRQPSLWAWQSVSGALEQTVTEAQVDDLKSGCPRLLPR*
Ga0063356_1010393063	3300004463	Arabidopsis Thaliana Rhizosphere	MNRYPSEQLMTVEEAERLSELHTGRNRRKEPIRQPSLWAWQSVSGALEQTVTETEVVRLKPDPH*
Ga0063356_1051490191	3300004463	Arabidopsis Thaliana Rhizosphere	MVRYPTEQLMTVEEAERLSELHTGRERRKRPARQPSLWAWQSVSGALEQTVTEEQIDEVMRTLRR*
Ga0063356_1063179611	3300004463	Arabidopsis Thaliana Rhizosphere	MYRYPTEQLMTVEEAERLSGLHTGRQRRKQPARQRSLWVWQSVAGALEQTVSEAQV
Ga0062595_1000697122	3300004479	Soil	MYRYPSEQLMTVEEAERLSELHTGRTRRKQQPRQPSLWAWQSVSGALEQTVTEAQVDDLKSGCPRLLPR*
Ga0062592_1000475512	3300004480	Soil	MVRYPTEQLMTVEEAERLSELHTGRTRRKQQPRQPSLWAWQSVSGALEQTVTEAQVDEMMRQLQSQDR*
Ga0062591_1024372612	3300004643	Soil	MYRYPSEQLMTVEEAERLSELHTGRTRRKQPRQPSLWVWQSVSGALEQTVTEAQVDEVIKSGCPRLLPR*
Ga0058859_114934522	3300004798	Host-Associated	LSELHTGRTRRKQQPRQPSLWAWQSVSGALEQTVTEAQVDDLKSGCPRLLPR*
Ga0066809_101808131	3300005168	Soil	MNRYPSEQLMTVEEAERLSELHTGRTRRKQQPRQPSLWAWQSVSGALEQTVTEAQVDPKSGCPRLLTR*
Ga0070670_1016314042	3300005331	Switchgrass Rhizosphere	MNRYPSEQLMTVEEAERLSELHTGRNRRKQPIRQPSLWAWQSVSEALEQTVTEEHVDEMIRTLRR*
Ga0066388_1045564521	3300005332	Tropical Forest Soil	MVRYPTEQLMTVEEAERLSELHTGRTRRKQQPRQPSLWAWQSVSGALEQTVTEAQVDEVIKSGCPRLLPR*
Ga0070677_100814523	3300005333	Miscanthus Rhizosphere	MYRYPSEQLMTVEEAERLSELHTGRTRRKQQPRQPSLWAWQSVSGALEQTVTEAQVDEMMRQLQSQDR*
Ga0068869_1000500454	3300005334	Miscanthus Rhizosphere	MVRYPTEQLMTVEEAERLSELHTGRTRRKQQPRQPSLWAWQSVSGALEQTVTEAQVDEAIRTLRLR*
Ga0070666_113570501	3300005335	Switchgrass Rhizosphere	MYRYPTEQLMTVEEAERLSELHTGRARRKQQPRQPSLWAWQSVSGALEQTVTEAQVDEAIRTLRLR*
Ga0070680_1011602322	3300005336	Corn Rhizosphere	MNRYPGEQLMSVEEAERLSELHTGRRRRKQPARQPSLWAWQSVSGALEQTVTEEQVDEMMRTLRR*
Ga0070668_1012063942	3300005347	Switchgrass Rhizosphere	GCMNRYPSEQLMTVEEAERLSGLHTGRNRRKQPVRQPSLWVWQSVSGALEQTVTEDQVDEMMRTLRR*
Ga0070659_1003988802	3300005366	Corn Rhizosphere	MVRYPTEQLMTVEEAERLSELHTGRTRRKQQPRQPSLWAWQSVSGALEQTVTEAQVDDLKSGCPRLLPR*
Ga0070703_103452111	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	MYRYPSEQLMTVEEAERLSELHTGRTRRKQQPRQPSLWAWQSVSGALEQTVTEAQVDDLKSGCP
Ga0070698_1017653332	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MNRYPSEQLMTVEEAERLSELHTGRNRRKQPVRQPSLWAWQSVSGALEQTVTDEQVDEMMRTLRR*
Ga0068857_1006798552	3300005577	Corn Rhizosphere	MNRYPSEQLMTVEEAERLSELHTGRNRRKQPVRQPSLWAWQSVPSALEQTVTEEPVNQLQSISGCPRLLPS*
Ga0068864_1009466513	3300005618	Switchgrass Rhizosphere	MNRYPSEQLMTVEEAERLSGLHTGRNRRKQPVRQPSLWVWQSVSGALEQTVTEDQVDE
Ga0068863_1023892011	3300005841	Switchgrass Rhizosphere	MYRYPTEQLMTVEEAERLSELHTGRARRKQQPRQPSLWAWQSVSGALEQTVTEAQVDEMMRQLQSQDR*
Ga0068860_1010014301	3300005843	Switchgrass Rhizosphere	MYRYPTEQLMTVEEAERLSELHTGRARRKQQPRQPSLWAWQSVSGALEQTVTEAQVEEAIRTLRLR*
Ga0081455_105838581	3300005937	Tabebuia Heterophylla Rhizosphere	MYRYPSEQLMTVEEAERLSELHTGRDRRKRPIRQPSLWAWQSVEGALEQTVSETQVDEMMRTLRR*
Ga0068871_1000218511	3300006358	Miscanthus Rhizosphere	MYRYPSEQLMTVEEAERLSELHTGRTRRKQQPRQPSLWAWQSVSGALEQTVTEAQVDDLKSGCPRLLP
Ga0075428_1000038197	3300006844	Populus Rhizosphere	MNRYPSEQLMTVEEAERLSELHTGRNRRKQPVRQPSLWAWQSVSGALEQTVTEKEAVRLKTDPH*
Ga0075428_1001706452	3300006844	Populus Rhizosphere	MVRYPTEQLMTVEEAERLSELQTKRERRKQQPRQPSLWVWQSVDGALAQTATEERPVRLKPDPH*
Ga0075428_1011765271	3300006844	Populus Rhizosphere	MYRYPTEQLMTVEEAERLSELHNGRARRKQQPRQPSLWVWQSVTGALEQTVTEQQVDEMMRTPSSDPRRPKS*
Ga0075428_1023086601	3300006844	Populus Rhizosphere	QVMEGCAMYRYPTEQLMTVEEAERLSELHTGRARRKQQPRQPSLWAWQSVAGALEQTVTEQQVDEMMQTLRPKS*
Ga0075421_1018397391	3300006845	Populus Rhizosphere	MNRYPSEQLLTVEEAERLSELDTARNRRKQPARQPSLWAWQSVPDALTQTAAEERVNLKPDPH*
Ga0075430_1000487481	3300006846	Populus Rhizosphere	MVRYPTEQLMTVEEAERLSELQTKRERRKQQPRQPSLWVWQSVEGALAQTVTEERPVRLKPDPH*
Ga0075430_1001031933	3300006846	Populus Rhizosphere	MYRYPTEQLMTVEEAERLSELHTGRARRKQQPRQPSLWAWQSVAGALEQTVTEAQVDEMMQTLRR*
Ga0075430_1006507232	3300006846	Populus Rhizosphere	MYRYPTEQLMTVDEAERLSGLHTGRQRRKQPARQPSLWVWQSVAGALEQTVSEAQVEAMMRTLRDPKR*
Ga0075431_1006441732	3300006847	Populus Rhizosphere	MYRYPTEQLMTVEEAERLSELHTGRQRRKQPARQPSLWAWQSVAGALEQTVTEQQVDEMMQTLRPKS*
Ga0075431_1013722812	3300006847	Populus Rhizosphere	MNRYPSEQLMTVEEAERLSELHTGRNRRKQPIRQPSLWAWQSVSEVLDREDCNPKSGCPRLLPS*
Ga0075425_1026965672	3300006854	Populus Rhizosphere	MYRYPTEQLMTVEEAERLSELHTGRARRKQQPRQPSLWAWQSVSGALEQTVTEAQV
Ga0079215_105362052	3300006894	Agricultural Soil	MNRYLSEQLMTVEEAERLSELHTGTQRHKQPARQPSLWAWQSVAGALGQTVTEEQVDKVMRTLRR*
Ga0079215_110910732	3300006894	Agricultural Soil	MYRYPTEQLMTVEEAERLSGLHTGRQRRKQPARQPSLWVWQSVAGALEQTVSEAQVEEMMRTLRDLDV*
Ga0075424_1022548292	3300006904	Populus Rhizosphere	SEQLMTVEEAERLSELHTGRKRRKQPIRQPDLWAWQSVSEVLDREDCNPKSGCPRLLPS*
Ga0079216_103554761	3300006918	Agricultural Soil	MYRYPTEQLMTVEEAERLSGLHTGRQRRKQPARQPSLWVWQSVAGALEQTVSEAQVEDMMRTLRDLDV*
Ga0079218_104566334	3300007004	Agricultural Soil	MYRYPTEQLMTVEEAERLSELHTGRERRKQPARQPGLWVWQSVAGALEQTVTEEQVDAMMRTLRAKDR*
Ga0079218_108841691	3300007004	Agricultural Soil	MDLEGCAMYRYPTEQLMTVEEAERLSGLHTGRQRRKQPARQPSLWVCQSVAGALEQTVSEAQVEEMMRALRDPTR*
Ga0111539_100496844	3300009094	Populus Rhizosphere	MEGCAMVRYPTEQLMTVEEAERLSELHTGRTRRKQQPRQPSLWAWQSVSGALEQTVTEAQVDEMMRQLQSQDR*
Ga0111539_101247654	3300009094	Populus Rhizosphere	MNRYPSEQLMTVEEAERLSELHTGRKRRKQPIRQPDLWAWQSVSEVLDREDCNPKSGCPRLLPS*
Ga0111539_110971201	3300009094	Populus Rhizosphere	TVEEAERLSELHTGRTRRKQQPRQPSLWAWQSVSGALEQTVTEAQVDVLKSGCPRLLPR*
Ga0075418_100291555	3300009100	Populus Rhizosphere	MEGCAMYRYPTEQLMTVEEAERLSELHNGRARRKQQPRQPSLWVWQSVTGALEQTVTEQQVDEMMRTPSSDPRRPKS*
Ga0114129_134311201	3300009147	Populus Rhizosphere	RYPSEQLMTVEEAERLSELHTGRNRRKEPIRQPSLWAWQSVSGALEQTVTETEVVRLKPDPH*
Ga0126314_113871171	3300010042	Serpentine Soil	MNRYPSEQLMTVDEAERLSELHTGRERRKQPARQPSLWAWQSLSGALTQTVTEEQVDEMMRTLRQHR*
Ga0126306_114912761	3300010166	Serpentine Soil	MNRNPSEQLMTVEEAERLSELHTGRNRRKQPVRQPSLWAWQSVAGALEQTVSEAQVEDMMRTMRDLDV*
Ga0126377_120690192	3300010362	Tropical Forest Soil	MNRYPSEQLMTVEEAERLSELHTGRNRRKQPIRQPVLWTWQSVRRHAGKKDCNPKSGCPRLLPS*
Ga0134128_104674873	3300010373	Terrestrial Soil	MYRYPSEQLMTVEEAERLSELHTGRTRRKQQPCQPSLWAWQSVSGALEQTVTEAQVDDLKSGCPRLLPR*
Ga0134122_112088381	3300010400	Terrestrial Soil	PSEQLMTVEEAERLSELHTGRTRRKQQPRQPSLWAWQSVSGALEQTVTEAQVDDLKSGCPRLLPR*
Ga0134122_122205491	3300010400	Terrestrial Soil	MNRYPSEQLMTVEEAERLSGLHTGRNRRKQPVRQPSLWVWQSVSGALEQTVTEDQVDEMM
Ga0134121_101924424	3300010401	Terrestrial Soil	MEGCAMYRYPSEQLMTVEEAERLSELHTGRTRRKQQPRQPSLWAWQSVSGALEQTVTEAQVDDLKSGCPRLLPR*
Ga0134123_104488163	3300010403	Terrestrial Soil	TVEEAERLSELHTGRTRRKQQPRQPSLWAWQSVSGALEQTVTEAQVDDLKSGCPRLLPR*
Ga0150984_1129181201	3300012469	Avena Fatua Rhizosphere	MYRYPAEQLMTVEEAERLSELHTGRARRKQQPRQPSLWAWQSVSGALAQTVTEAQVDETMRKLRLR*
Ga0157303_101050371	3300012896	Soil	MEGCAMVRYPTEQLMTVEEAERLSELHTGRKRRKQQPRQPSLWAWQSISGALEQTVTEVQVDEMMRTWRQDR*
Ga0157296_102363621	3300012905	Soil	MYRYPSEQLMTVEEAERLSELHTGRTRRKQQPRQPSLWAWQSVSGALEQTVTEAQLDDLKSGCPRLLPR*
Ga0157295_101091322	3300012906	Soil	MEGCAMVRYPTEQLMTVEEAERLSELHTGRTRRKQQPRQPSLWAWQSVSGALEQTVTEAQVDDLKSGCPRLLPR*
Ga0157298_101710341	3300012913	Soil	MYRYPSEQLMTVEEAERLSELHTGRTRRKQQPRQPSLWAWQSVSGALEQTVTEAQVDD
Ga0157378_100798702	3300013297	Miscanthus Rhizosphere	MYRYPTEQLMTVEEAERLSELQTGRARRKQQPRQPSLWAWQSVSGALEQTVTEAQVEEAIRTLRLR*
Ga0132258_101427677	3300015371	Arabidopsis Rhizosphere	YPSEQLMTVEEAERLSELHTGRTRRKQQPRQPSLWAWQSVSGALEQTVTEAQVDDLKSGCPRLLPR*
Ga0132255_1040168772	3300015374	Arabidopsis Rhizosphere	MYRYPSEQLMTVEEAERLSELHTGRARRKQQPRQPSLWAWQSVSGALEQTVTEAQVDEVTRTRRTR*
Ga0163161_101333283	3300017792	Switchgrass Rhizosphere	MYRYPSEQLMTVEEAERLSELHTGRARRKQQPRQPSLWAWQSVSGALEQTVTEAQVDDLKSGCPRLLPR
Ga0190265_100670284	3300018422	Soil	MYRYPTEQLMTVEEAERLSGLQTGRARRKQPARQPSLWVWQSVAGALEQTVSEAQVEEMMRTLRDLDV
Ga0190265_108763902	3300018422	Soil	VNRYPSEQLMTVEEAQRLSDLQTGREERTARERGARIWTWQSVAGALEQTVSDEQVEQVMRTVRKR
Ga0190272_101718471	3300018429	Soil	MYRYPTEQLMTVGEAERLSGLHTGRERRKRPARQPSLWVWQSVPGALEQTVSEAQVEDMVRTLRDLDV
Ga0190272_124899181	3300018429	Soil	MYRYPTEQLMTVEEAERLSGLQAGRERRKRQPRQPSLWVWQSVSGALEQTVTETQVDEMMRTLRPQNR
Ga0190269_120286181	3300018465	Soil	MNRYLSERLMTVEEAEHLSRLQTDRDERKPQNKPASLWAWQSLDGALMQTVTEEQVDRAMRTLSKR
Ga0190268_101423812	3300018466	Soil	MYRYPTEQLMTVEEAERLSGLQTGRERRKQPTRQPSLWAWQSVAGALEQTVSEAQVEDMMRTLRDLDV
Ga0190274_103352292	3300018476	Soil	MYRYPTEQLMTVEEAERLSGLQTGRERRKQPARQPSLWVWQSVAGALEQTVSEAQVEQMMRTLRDLDR
Ga0190274_106832712	3300018476	Soil	MNRYPSEQLMTVEEAERLSELHTGRNRRKQPVRQPSLWAWQSVSGALEQTVTDEQVDNVIRTLRR
Ga0187894_100545701	3300019360	Microbial Mat On Rocks	MYRYPTEQLMTVEEAERLSGLHNGRKQRKQQPRQPSLWVWQSVAGALEQTVTETEV
Ga0173482_100515312	3300019361	Soil	MYRYPSEQLMTVEEAERLSELHTGRTRRKQQPRQPSLWAWQSVSGALEQTVTEAQVDDLKSGCPRLLPR
Ga0173479_108882151	3300019362	Soil	AMVRYPTEQLMTVEEAERLSELHTGRTRRKQQPRQPSLWAWQSVSGALEQTVTEAQVDEMMRQLQSQDR
Ga0190264_100550381	3300019377	Soil	MYRYPTEQLMTVEEAERLSGLQTGRERRKQPARKPSLWAWQSVAGALEQTVSEAQVEAMMRTLRDQDL
Ga0247792_10470362	3300022880	Soil	MVRYPTEQLMTVEEAERLSELHTGRTRRKQQPRQPSLWAWQSVSGALEQTVTEAQVDEMMRQLQSQDR
Ga0207696_10847862	3300025711	Switchgrass Rhizosphere	MYRYPSEQLMTVEEAERLSELHTGRTRRKQQPRQPSLWAWQSVSGALEQTVTEAQVDEMMRQLQSQDR
Ga0207680_112082621	3300025903	Switchgrass Rhizosphere	MYRYPTEQLMTVEEAERLSELHTGRARRKQQPRQPSLWAWQSVSGALEQTVTEAQVEEAIRTLRLR
Ga0207671_111415611	3300025914	Corn Rhizosphere	MVRYPTEQLMTVEEAERLSELHTGRTRRKQQPRQPSLWAWQSVSGALEQTVTEAQVDEMMRQLQSQD
Ga0207657_103758381	3300025919	Corn Rhizosphere	MYRYPSEQLMTVEEAERLSELHTGRARRKQQPRQPSLWAWQSVSGALEQTVTEAQVDEMMRQLQSQDR
Ga0207652_111348132	3300025921	Corn Rhizosphere	MNRYPGEQLMSVEEAERLSELHTGRTRRKQQPRQPSLWAWQSVSGALEQTVTEAQVDEMMRQLQSQDR
Ga0207659_109523861	3300025926	Miscanthus Rhizosphere	MYRYPTEQLMTVEEAERLSELHTGRARRKQQPRQPSLWAWQSVSGALEQTVTEAQVDEAIRTLRLR
Ga0207641_106625422	3300026088	Switchgrass Rhizosphere	MYRYPTEQLMTVEEAERLSELHTGRARRKQQPRQPSLWAWQSVSGALEQTVTEAQVDEMMRQLQSQDR
Ga0207674_106022393	3300026116	Corn Rhizosphere	MNRYPSEQLMTVEEAERLSELHTGRNRRKQPVRQPSLWAWQSVPSALEQTVTEEPVNQLQSISGCPRLLPS
Ga0207698_120033031	3300026142	Corn Rhizosphere	MYRYPTEQLMTVEEAERLSELHTGRTRRKQQPRQPSLWAWQSVSGALEQTVTEAQVDDLKSGCPRLLPR
Ga0209481_1000015428	3300027880	Populus Rhizosphere	MVRYPTEQLMTVEEAERLSELQTKRERRKQQPRQPSLWVWQSVDGALAQTATEERPVRLKPDPH
Ga0209481_100998482	3300027880	Populus Rhizosphere	MNRYPSEQLMTVEEAERLSELHTGRNRRKQPVRQPSLWAWQSVSGALEQTVTEKEAVRLKTDPH
Ga0209486_101216743	3300027886	Agricultural Soil	MYRYPTEQLMTVEEAERLSGLHTGRQRRKQPARQPSLWVCQSVAGALEQTVSEAQVEEMMRALRDPTR
Ga0209486_105954341	3300027886	Agricultural Soil	SKQIQEGCAMYRYPTEQLMTVEEAERLSELHTGRERRKQPARQPGLWVWQSVAGALEQTVTEEQVDAMMRTLRAKDR
Ga0209382_1000017773	3300027909	Populus Rhizosphere	MYRYPTEQLMTVEEAERLSELHNGRARRKQQPRQPSLWVWQSVTGALEQTVTEQQVDEMMRTPSSDPRRPKS
Ga0209382_110037551	3300027909	Populus Rhizosphere	MNRYPSEQLLTVEEAERLSELDTARNRRKQPARQPSLWAWQSVPDALTQTAAEERVNLKPDPH
Ga0209382_123319851	3300027909	Populus Rhizosphere	CPRWLEQVMEGCAMYRYPTEQLMTVEEAERLSELHTGRQRRKQPARQPSLWAWQSVAGALEQTVTEQQVDEMMQTLRPKS
Ga0268266_108336652	3300028379	Switchgrass Rhizosphere	FSAADTELTGSQGSRLILEGCMNRYPSEQLMTVEEAERLSGLHTGRNRRKQPVRQPSLWVWQSVSGALEQTVTEDQVDEMMRTLRR
Ga0247820_102806493	3300028597	Soil	MVRYPTEQLMTVEEAERLSELHTGRTRRKQQPRQPSLWAWQSVSGALEQTVTEAQVDEMMRQLRSQDR
Ga0247819_105509112	3300028608	Soil	MVRYPTEQLMTVEEAERLSELHTGRTRRKQQPRQPSLWAWQSVSGALEQTVTEAQVDVLKSGCPRLLPR
Ga0247824_107161502	3300028809	Soil	MVRYPTEQLMTVEEAERLSELHNGRTRRKQQPRQPSLWAWQSVSGALEQTVTEAQVDEMMRQLQSQDR
Ga0307513_109787812	3300031456	Ectomycorrhiza	MYRYPSEQLMTVEEAERLSELHTGRQRRKQPARQPSLWVWQSFSGALTQTVTEERVVRLKPDPH
Ga0310888_101897852	3300031538	Soil	MNRYPSEQLMTVEEAERLSGLHTGRNRRKQPVRQPSLWVWQSVSGALEQTVTEDQVDEMMRTLRR
Ga0310887_100415441	3300031547	Soil	MVRYPTEQLMTVEEAERLSELHNGRTRRKQQPRQPSLWAWQSVSGALEQTVTEAQVD
Ga0310887_103432161	3300031547	Soil	MVRYPTEQLMTVEEAERLSELHTGRTRRKQQPRQPSLWAWQSVSGALEQTVTEAQ
Ga0307408_1001143064	3300031548	Rhizosphere	MNRYPSEQLMSVEEAERLSELHTGRRRRKQPARQPSLWAWQSVSNALEQTVTEEQVDEMMRTLRR
Ga0307408_1022217522	3300031548	Rhizosphere	MYRYPTEQLMTVEEAERLSGLQTGRERRKQPARQPSLWAWQSVAGALEQTVSEAQVEDMMRTMRDLDV
Ga0307405_115769961	3300031731	Rhizosphere	MYRYPTEQLMTVEEAERLSGLQTGRERRKQPARQPSLWAWQSVAGALEQTVSEAQVEEMMRTMRDLDV
Ga0307413_107430862	3300031824	Rhizosphere	MYRYPTEQLMTVEEAERLSGLQTGRERRKQPARQPGLWAWQSVAGALEQTVSEAQVEDMMRTMRDLDV
Ga0310904_100276413	3300031854	Soil	MVRYPTEQLMTVEEAERLSELHTGRTRRKQQPRQPSLWAWQSVSGALEQTVTEAQVDEMMRTSRQDR
Ga0310904_110759702	3300031854	Soil	MYRYPSEQLMTVEEAERLSELHTGRTRRKQPRQPSLWVWQSVSGALEQTVTEAQVDEVIKSGCPRLLPR
Ga0307406_101377862	3300031901	Rhizosphere	MYRYPSEQLMTVEEAERLSELHTGRERRKQQPRQPSLWVWQSVSGALEQTVTEAQVDEMMQTQPTIPTGSR
Ga0307412_100945454	3300031911	Rhizosphere	MYRYPTEQLMTVEEAERLSGLQTGRERRKQPARQPSLWAWQSVAGALEQTVSGAQVEDMMRTMRDLDV
Ga0307412_111488372	3300031911	Rhizosphere	MYRYPSEQLMTVEEAERLSELHTGRERRKQQPRQPSLWVWQSVSGALEQTVTEAQVDEMMRQLRSQDR
Ga0310903_105076731	3300032000	Soil	EGCAMVRYPTEQLMTVEEAERLSELHTGRTRRKQQPRQPSLWAWQSVSGALEQTVTEAQVDEMMRQLQSQDR
Ga0307416_1008274273	3300032002	Rhizosphere	MYGYPTEQLMTVEEAERLSELQTGRTRRKQPARQPSLWVWQSVSGALEQTVTETQVDEMMRTLRPQNR
Ga0307411_101052282	3300032005	Rhizosphere	MVRYPTEQLMTVEEAERLCELQTGRRRRKQQPSQPSLWVWQSIEGALAQTVTEERPVRLKPDPH
Ga0310890_117279572	3300032075	Soil	MYRYPSEQLMTVEEAERLSELHTGRTRRKQPRQPSLWVWQSVSGALEQTVTEAQVDEVIKSGC
Ga0307470_108971722	3300032174	Hardwood Forest Soil	MVRYPTEQLMTVEEAERLSELHTGRARRKQQPRQPSLWVWQSVSGALEQTVTEDQVDEAIRTLQLKNR
Ga0310889_100231054	3300032179	Soil	MNRYPSEQLMTVEEAERLSELQTKRERRKQQPRQPSLWVWQSVDGALAQTATEERPVRLKPDPH
Ga0310812_100126241	3300032421	Soil	MYRYPSEQLMTVEEAERLSELHTGRTRRKQQPRQPSLWAWQSVSGALEQTVTEAQVDDLKSGCPRLL
Ga0310810_100620173	3300033412	Soil	MYRYPSEQLMTVEEAERLSELHTGRARRKQQPRQPSLWAWQSVSGALEQTVTEAQVDEVMRTRRPR
Ga0373959_0128969_3_197	3300034820	Rhizosphere Soil	MYRYPSEQLMTVEEAERLSELHTGRTRRKQQPRQPSLWAWQSVSGALEQTVTEAQVDDLKSGCPR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F059043

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences