Metagenome Family F058937

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F058937
Family Type	Metagenome
Number of Sequences	134
Average Sequence Length	41 residues
Representative Sequence	MQTAAIAFLFAVAAVNGVLILLAVRAFLQGMRGSVDSFADPE
Number of Associated Samples	47
Number of Associated Scaffolds	134

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	85.82 %
% of genes near scaffold ends (potentially truncated)	17.16 %
% of genes from short scaffolds (< 2000 bps)	85.07 %
Associated GOLD sequencing projects	43
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.54

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (64.179 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous (28.358 % of family members)
Environment Ontology (ENVO)	Unclassified (39.552 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (50.000 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 54.29% β-sheet: 0.00% Coil/Unstructured: 45.71%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.54
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.54
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 134 Family Scaffolds
PF02599	CsrA	35.07
PF01555	N6_N4_Mtase	24.63
PF07508	Recombinase	3.73
PF12728	HTH_17	2.24
PF05069	Phage_tail_S	0.75
PF02768	DNA_pol3_beta_3	0.75

COG ID	Name	Functional Category	% Frequency in 134 Family Scaffolds
COG1551	sRNA-binding carbon storage regulator CsrA	Signal transduction mechanisms [T]	35.07
COG0863	DNA modification methylase	Replication, recombination and repair [L]	24.63
COG1041	tRNA G10 N-methylase Trm11	Translation, ribosomal structure and biogenesis [J]	24.63
COG2189	Adenine specific DNA methylase Mod	Replication, recombination and repair [L]	24.63
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	3.73
COG0592	DNA polymerase III sliding clamp (beta) subunit, PCNA homolog	Replication, recombination and repair [L]	0.75
COG5005	Mu-like prophage protein gpG	Mobilome: prophages, transposons [X]	0.75

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.18 %
All Organisms	root	All Organisms	35.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.18 %
cellular organisms	root	All Organisms → cellular organisms	32.09 %
Viruses	superkingdom	All Organisms → Viruses	3.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.18 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	32.09 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.18 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	17.91 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	9.70 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.73 %
Spirochaetes	phylum	All Organisms → cellular organisms → Bacteria → Spirochaetes	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.18 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	9.70 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.73 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2.24 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.49 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	1.49 %
unclassified Spirochaetota	no rank	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.18 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	9.70 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.73 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2.24 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1.49 %
Spirochaetes bacterium GWB1_59_5	species	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetes bacterium GWB1_59_5	0.75 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.75 %
Epsilonproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Epsilonproteobacteria	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.18 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.73 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2.24 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	1.49 %
Planctomycetales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales	0.75 %
Campylobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Epsilonproteobacteria → Campylobacterales	0.75 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	0.75 %
Spirochaetes bacterium GWB1_59_5	species	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetes bacterium GWB1_59_5	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.18 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.73 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2.24 %
Caballeronia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Caballeronia	1.49 %
Planctomycetaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae	0.75 %
Deltaproteobacteria bacterium 37-65-8	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium 37-65-8	0.75 %
Helicobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Epsilonproteobacteria → Campylobacterales → Helicobacteraceae	0.75 %
Spirochaetes bacterium GWB1_59_5	species	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetes bacterium GWB1_59_5	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.18 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.73 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2.24 %
unclassified Caballeronia	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Caballeronia → unclassified Caballeronia	1.49 %
Helicobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Epsilonproteobacteria → Campylobacterales → Helicobacteraceae → Helicobacter	0.75 %
Symmachiella	genus	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → Symmachiella	0.75 %
Deltaproteobacteria bacterium 37-65-8	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium 37-65-8	0.75 %
Spirochaetes bacterium GWB1_59_5	species	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetes bacterium GWB1_59_5	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.18 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.73 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2.24 %
Caballeronia sp. EK	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Caballeronia → unclassified Caballeronia → Caballeronia sp. EK	1.49 %
Symmachiella macrocystis	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → Symmachiella → Symmachiella macrocystis	0.75 %
Helicobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Epsilonproteobacteria → Campylobacterales → Helicobacteraceae → Helicobacter	0.75 %
Deltaproteobacteria bacterium 37-65-8	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium 37-65-8	0.75 %
Spirochaetes bacterium GWB1_59_5	species	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetes bacterium GWB1_59_5	0.75 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300005527\|Ga0068876_10119052	All Organisms → cellular organisms → Bacteria → Proteobacteria	1567	Open in IMG/M
3300005581\|Ga0049081_10121410	Not Available	967	Open in IMG/M
3300006030\|Ga0075470_10037631	All Organisms → cellular organisms → Bacteria → Proteobacteria	1492	Open in IMG/M
3300006030\|Ga0075470_10039587	Not Available	1453	Open in IMG/M
3300006030\|Ga0075470_10040961	All Organisms → cellular organisms → Bacteria	1427	Open in IMG/M
3300006030\|Ga0075470_10072887	All Organisms → cellular organisms → Bacteria	1041	Open in IMG/M
3300006030\|Ga0075470_10075130	Not Available	1023	Open in IMG/M
3300006030\|Ga0075470_10105127	All Organisms → cellular organisms → Bacteria → Proteobacteria	842	Open in IMG/M
3300006030\|Ga0075470_10120098	All Organisms → cellular organisms → Bacteria → Proteobacteria	778	Open in IMG/M
3300006030\|Ga0075470_10154393	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Epsilonproteobacteria → Campylobacterales → Helicobacteraceae → Helicobacter	669	Open in IMG/M
3300006030\|Ga0075470_10173785	Not Available	623	Open in IMG/M
3300006030\|Ga0075470_10233306	Not Available	521	Open in IMG/M
3300006030\|Ga0075470_10243730	Not Available	507	Open in IMG/M
3300006641\|Ga0075471_10260133	Not Available	890	Open in IMG/M
3300006802\|Ga0070749_10394107	Not Available	765	Open in IMG/M
3300006805\|Ga0075464_10891950	Not Available	555	Open in IMG/M
3300006875\|Ga0075473_10056610	All Organisms → cellular organisms → Bacteria	1521	Open in IMG/M
3300006917\|Ga0075472_10214327	Not Available	947	Open in IMG/M
3300007344\|Ga0070745_1358419	Not Available	510	Open in IMG/M
3300007363\|Ga0075458_10013650	Not Available	2590	Open in IMG/M
3300007363\|Ga0075458_10024707	Not Available	1910	Open in IMG/M
3300007363\|Ga0075458_10036353	All Organisms → cellular organisms → Bacteria → Proteobacteria	1558	Open in IMG/M
3300007363\|Ga0075458_10137113	Not Available	758	Open in IMG/M
3300008266\|Ga0114363_1035693	Not Available	2063	Open in IMG/M
3300008266\|Ga0114363_1038394	All Organisms → cellular organisms → Bacteria → Proteobacteria	2592	Open in IMG/M
3300008266\|Ga0114363_1058186	Not Available	1512	Open in IMG/M
3300008266\|Ga0114363_1089012	Not Available	1133	Open in IMG/M
3300008266\|Ga0114363_1096797	Not Available	1069	Open in IMG/M
3300008266\|Ga0114363_1128578	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	869	Open in IMG/M
3300008266\|Ga0114363_1131027	All Organisms → cellular organisms → Bacteria → Proteobacteria	857	Open in IMG/M
3300008266\|Ga0114363_1144828	Not Available	795	Open in IMG/M
3300008266\|Ga0114363_1240626	Not Available	517	Open in IMG/M
3300008448\|Ga0114876_1029703	Not Available	2695	Open in IMG/M
3300008448\|Ga0114876_1034675	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Caballeronia → unclassified Caballeronia → Caballeronia sp. EK	2427	Open in IMG/M
3300008448\|Ga0114876_1059101	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	1687	Open in IMG/M
3300008448\|Ga0114876_1087656	Not Available	1274	Open in IMG/M
3300008448\|Ga0114876_1097148	All Organisms → Viruses → Predicted Viral	1183	Open in IMG/M
3300008448\|Ga0114876_1212665	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	640	Open in IMG/M
3300008450\|Ga0114880_1024412	Not Available	2772	Open in IMG/M
3300008450\|Ga0114880_1026545	All Organisms → cellular organisms → Bacteria → Proteobacteria	2629	Open in IMG/M
3300010370\|Ga0129336_10370323	Not Available	786	Open in IMG/M
3300012012\|Ga0153799_1019429	Not Available	1381	Open in IMG/M
3300013372\|Ga0177922_10114258	All Organisms → cellular organisms → Bacteria	7643	Open in IMG/M
3300013372\|Ga0177922_10665418	All Organisms → cellular organisms → Bacteria → Proteobacteria	2033	Open in IMG/M
3300013372\|Ga0177922_10968277	Not Available	634	Open in IMG/M
3300013372\|Ga0177922_11055058	Not Available	686	Open in IMG/M
3300017747\|Ga0181352_1147443	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	624	Open in IMG/M
3300022179\|Ga0181353_1063044	Not Available	957	Open in IMG/M
3300025585\|Ga0208546_1010427	Not Available	2453	Open in IMG/M
3300025585\|Ga0208546_1031614	All Organisms → cellular organisms → Bacteria → Proteobacteria	1301	Open in IMG/M
3300025585\|Ga0208546_1037094	Not Available	1183	Open in IMG/M
3300025585\|Ga0208546_1042822	Not Available	1091	Open in IMG/M
3300025585\|Ga0208546_1042828	All Organisms → cellular organisms → Bacteria → Proteobacteria	1091	Open in IMG/M
3300025585\|Ga0208546_1054112	Not Available	949	Open in IMG/M
3300025585\|Ga0208546_1058333	Not Available	908	Open in IMG/M
3300025635\|Ga0208147_1005848	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → Symmachiella → Symmachiella macrocystis	3545	Open in IMG/M
3300025635\|Ga0208147_1012845	Not Available	2300	Open in IMG/M
3300025635\|Ga0208147_1136858	Not Available	577	Open in IMG/M
3300025732\|Ga0208784_1026801	Not Available	1848	Open in IMG/M
3300025848\|Ga0208005_1009796	All Organisms → Viruses → Predicted Viral	2926	Open in IMG/M
3300025848\|Ga0208005_1067518	Not Available	1112	Open in IMG/M
3300025848\|Ga0208005_1101951	Not Available	896	Open in IMG/M
3300025848\|Ga0208005_1179844	All Organisms → cellular organisms → Bacteria → Proteobacteria	658	Open in IMG/M
3300025848\|Ga0208005_1218880	Not Available	590	Open in IMG/M
3300025848\|Ga0208005_1224161	Not Available	582	Open in IMG/M
3300027805\|Ga0209229_10316457	Not Available	686	Open in IMG/M
3300027805\|Ga0209229_10322112	Not Available	679	Open in IMG/M
3300031758\|Ga0315907_10065686	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Caballeronia → unclassified Caballeronia → Caballeronia sp. EK	3155	Open in IMG/M
3300031758\|Ga0315907_10898064	Not Available	651	Open in IMG/M
3300031758\|Ga0315907_11110381	Not Available	561	Open in IMG/M
3300031787\|Ga0315900_10009474	Not Available	12356	Open in IMG/M
3300031787\|Ga0315900_10038172	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	5227	Open in IMG/M
3300031787\|Ga0315900_10251927	Not Available	1507	Open in IMG/M
3300031787\|Ga0315900_10478503	Not Available	952	Open in IMG/M
3300031787\|Ga0315900_11062592	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	525	Open in IMG/M
3300031787\|Ga0315900_11132424	Not Available	501	Open in IMG/M
3300031857\|Ga0315909_10103205	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	2451	Open in IMG/M
3300031857\|Ga0315909_10145841	All Organisms → cellular organisms → Bacteria	1959	Open in IMG/M
3300031857\|Ga0315909_10157897	Not Available	1856	Open in IMG/M
3300031857\|Ga0315909_10628815	Not Available	711	Open in IMG/M
3300031857\|Ga0315909_10786173	Not Available	604	Open in IMG/M
3300031857\|Ga0315909_10853518	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	568	Open in IMG/M
3300031951\|Ga0315904_10166366	Not Available	2211	Open in IMG/M
3300031951\|Ga0315904_10337285	Not Available	1394	Open in IMG/M
3300031951\|Ga0315904_10339159	Not Available	1389	Open in IMG/M
3300031951\|Ga0315904_10459903	Not Available	1134	Open in IMG/M
3300031951\|Ga0315904_10676553	All Organisms → cellular organisms → Bacteria → Proteobacteria	872	Open in IMG/M
3300031951\|Ga0315904_10803273	Not Available	774	Open in IMG/M
3300031951\|Ga0315904_10855153	Not Available	741	Open in IMG/M
3300031951\|Ga0315904_10918811	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	704	Open in IMG/M
3300031963\|Ga0315901_10253102	All Organisms → cellular organisms → Bacteria → Proteobacteria	1488	Open in IMG/M
3300031963\|Ga0315901_10325557	Not Available	1262	Open in IMG/M
3300031963\|Ga0315901_10328681	Not Available	1254	Open in IMG/M
3300031963\|Ga0315901_10360983	Not Available	1179	Open in IMG/M
3300031963\|Ga0315901_10842462	Not Available	659	Open in IMG/M
3300032093\|Ga0315902_10455268	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	1132	Open in IMG/M
3300032093\|Ga0315902_10475704	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	1097	Open in IMG/M
3300032116\|Ga0315903_10233755	Not Available	1603	Open in IMG/M
3300032116\|Ga0315903_10416808	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	1088	Open in IMG/M
3300032116\|Ga0315903_10525617	Not Available	928	Open in IMG/M
3300032116\|Ga0315903_10562082	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium 37-65-8	885	Open in IMG/M
3300032116\|Ga0315903_10898802	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	633	Open in IMG/M
3300032116\|Ga0315903_11012772	Not Available	580	Open in IMG/M
3300033816\|Ga0334980_0032025	All Organisms → Viruses → Predicted Viral	2243	Open in IMG/M
3300033816\|Ga0334980_0063878	All Organisms → Viruses → Predicted Viral	1549	Open in IMG/M
3300033979\|Ga0334978_0053413	All Organisms → Viruses → Predicted Viral	2091	Open in IMG/M
3300033980\|Ga0334981_0238097	Not Available	830	Open in IMG/M
3300033980\|Ga0334981_0347399	Not Available	646	Open in IMG/M
3300033981\|Ga0334982_0081481	All Organisms → cellular organisms → Bacteria → Proteobacteria	1733	Open in IMG/M
3300033981\|Ga0334982_0510916	Not Available	530	Open in IMG/M
3300033993\|Ga0334994_0526599	Not Available	544	Open in IMG/M
3300034012\|Ga0334986_0296389	Not Available	859	Open in IMG/M
3300034012\|Ga0334986_0300407	Not Available	851	Open in IMG/M
3300034012\|Ga0334986_0474345	All Organisms → cellular organisms → Bacteria → Proteobacteria	620	Open in IMG/M
3300034012\|Ga0334986_0527421	Not Available	575	Open in IMG/M
3300034020\|Ga0335002_0159998	Not Available	1447	Open in IMG/M
3300034020\|Ga0335002_0167891	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1401	Open in IMG/M
3300034020\|Ga0335002_0621948	Not Available	555	Open in IMG/M
3300034020\|Ga0335002_0664537	Not Available	529	Open in IMG/M
3300034062\|Ga0334995_0400270	Not Available	860	Open in IMG/M
3300034101\|Ga0335027_0670897	Not Available	620	Open in IMG/M
3300034104\|Ga0335031_0389581	Not Available	879	Open in IMG/M
3300034104\|Ga0335031_0538224	Not Available	702	Open in IMG/M
3300034111\|Ga0335063_0257813	Not Available	947	Open in IMG/M
3300034111\|Ga0335063_0414866	Not Available	677	Open in IMG/M
3300034111\|Ga0335063_0538114	Not Available	561	Open in IMG/M
3300034112\|Ga0335066_0100688	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	1827	Open in IMG/M
3300034112\|Ga0335066_0170937	All Organisms → cellular organisms → Bacteria → Proteobacteria	1311	Open in IMG/M
3300034118\|Ga0335053_0275893	Not Available	1067	Open in IMG/M
3300034118\|Ga0335053_0744720	Not Available	547	Open in IMG/M
3300034120\|Ga0335056_0525875	Not Available	620	Open in IMG/M
3300034122\|Ga0335060_0309965	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetes bacterium GWB1_59_5	860	Open in IMG/M
3300034272\|Ga0335049_0495894	Not Available	779	Open in IMG/M
3300034280\|Ga0334997_0545000	Not Available	721	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	70.90%
Marine	Environmental → Aquatic → Marine	29.10%

Habitat	Taxonomy	Distribution
Lake	Environmental → Aquatic → Freshwater → Lake	39.55%
Coastal	Environmental → Aquatic → Marine → Coastal	29.10%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	26.87%
Lentic	Environmental → Aquatic → Freshwater → Lentic	4.48%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	39.55%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	29.10%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	26.87%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	4.48%

Habitat	Taxonomy	Distribution
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	28.36%
Freshwater	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater	26.87%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	23.13%
Freshwater, Plankton	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton	6.72%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	5.97%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	3.73%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	2.24%
Freshwater And Sediment	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater And Sediment	1.49%
Freshwater Lentic	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic	0.75%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	0.75%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300005527	Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel5S_2200h metaG	Environmental	Open in IMG/M
3300005581	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER78MSRF	Environmental	Open in IMG/M
3300006030	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_D_<0.8_DNA	Environmental	Open in IMG/M
3300006641	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_D_>0.8_DNA	Environmental	Open in IMG/M
3300006802	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18	Environmental	Open in IMG/M
3300006805	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_0.19_<0.8_DNA	Environmental	Open in IMG/M
3300006875	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_N_>0.8_DNA	Environmental	Open in IMG/M
3300006917	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_N_<0.8_DNA	Environmental	Open in IMG/M
3300007344	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_4	Environmental	Open in IMG/M
3300007363	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_0.3_<0.8_DNA	Environmental	Open in IMG/M
3300008266	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample HABS-E2014-0108-C-NA	Environmental	Open in IMG/M
3300008448	Freshwater viral communities during cyanobacterial harmful algal blooms (CHABs) in Western Lake Erie, USA - August 4, 2014 all contigs	Environmental	Open in IMG/M
3300008450	Freshwater viral communities during cyanobacterial harmful algal blooms (CHABs) in Western Lake Erie, USA - Oct 27, 2014 all contigs	Environmental	Open in IMG/M
3300010370	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.2_DNA	Environmental	Open in IMG/M
3300012012	Freshwater microbial communities from Eastern Basin Lake Erie, Ontario, Canada - Station 879 - Top - Depth 1m	Environmental	Open in IMG/M
3300013372	Freshwater microbial communities from Lake Erie, Ontario, Canada. Combined Assembly of 10 SPs	Environmental	Open in IMG/M
3300017747	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MLB.S.N	Environmental	Open in IMG/M
3300022179	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MLB.D.N	Environmental	Open in IMG/M
3300025585	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_D_<0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025635	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_0.3_<0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025732	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_N_>0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025848	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_N_<0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300027805	Freshwater and sediment microbial communities from dead zone in Sandusky Bay, Ohio, USA (SPAdes)	Environmental	Open in IMG/M
3300031758	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA123	Environmental	Open in IMG/M
3300031787	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA114	Environmental	Open in IMG/M
3300031857	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA125	Environmental	Open in IMG/M
3300031951	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA120	Environmental	Open in IMG/M
3300031963	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA116	Environmental	Open in IMG/M
3300032093	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA117	Environmental	Open in IMG/M
3300032116	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA119	Environmental	Open in IMG/M
3300033816	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME16Sep2004-rr0005	Environmental	Open in IMG/M
3300033979	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME30Aug2017-rr0003	Environmental	Open in IMG/M
3300033980	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME09Aug2015-rr0007	Environmental	Open in IMG/M
3300033981	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME24Aug2014-rr0011	Environmental	Open in IMG/M
3300033993	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME20Jul2012-rr0037	Environmental	Open in IMG/M
3300034012	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME18Aug2017-rr0027	Environmental	Open in IMG/M
3300034020	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME07Aug2015-rr0055	Environmental	Open in IMG/M
3300034062	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME27Jul2012-rr0045	Environmental	Open in IMG/M
3300034101	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME19Sep2005-rr0107	Environmental	Open in IMG/M
3300034104	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME02Aug2005-rr0120	Environmental	Open in IMG/M
3300034111	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME03Oct2011-rr0186	Environmental	Open in IMG/M
3300034112	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME27Aug2014-rr0191	Environmental	Open in IMG/M
3300034118	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME05Aug2017-rr0165	Environmental	Open in IMG/M
3300034120	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME07Aug2014-rr0172	Environmental	Open in IMG/M
3300034122	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME03Aug2014-rr0181	Environmental	Open in IMG/M
3300034272	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME18Jul2017-rr0156	Environmental	Open in IMG/M
3300034280	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME10Aug2009-rr0048	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0068876_101190524	3300005527	Freshwater Lake	MQTAAIAFLLTAATVNGVLVVLALRAFLAGMRGSVDSFADPE*
Ga0049081_101214102	3300005581	Freshwater Lentic	MQTVSIAFLLTVAAVNGVLIILALRAFLAGLRGSVDSFADWE*
Ga0075470_100376311	3300006030	Aqueous	MQTAAIAFLFAVAAVNGVLIILAVRAFVATMRGSVDSFADPE*
Ga0075470_100395872	3300006030	Aqueous	MQTAAIAFLAAAAAVNGILAILAIQAFLATMRGSVDSIDEWE*
Ga0075470_100409612	3300006030	Aqueous	MQTAAIAFLFAVAAVNGVLILLAVRAFLQGMRGSVDSFADPE*
Ga0075470_100728871	3300006030	Aqueous	MQTAAIAFLAVVVITNGVLIMLAVRAFVATMRGSVDSFADPE*
Ga0075470_100751301	3300006030	Aqueous	MQTAAIAFLFAVAAANGVLIILAVRAFVATMRGSVDSFADPE*
Ga0075470_101051272	3300006030	Aqueous	MQTAAIAFLFAVVMTNGVLIVLAVRAFLQGLRGSVDSICDPE*
Ga0075470_101200982	3300006030	Aqueous	MQTAAIAFLFAVAAVNGILIMLAVRAFLQGLRGSVDSICDPE*
Ga0075470_101543932	3300006030	Aqueous	MQTAAIAFLAAVVITNGVLIILAVRAFVATMRGSVDSIADPE*
Ga0075470_101737851	3300006030	Aqueous	MQTAAIAFLFAVAAANAILIILAVRAFLQGLRGSVDSIADPE*
Ga0075470_102333062	3300006030	Aqueous	MQTAAIAFLFAIAAANGVLIILAVRAFLQGMRGSVDSFADPE*
Ga0075470_102437302	3300006030	Aqueous	MQTAAIAFLFAVAAANGVLIILAVRAFVATMRGSVDSIVDPE*
Ga0075471_102601332	3300006641	Aqueous	MQTAAIAFLFAVAAVNGVLVLLAVRAFLQGMRGSVDSFADPE*
Ga0070749_103941072	3300006802	Aqueous	MQTAAIAFLFAVAAANAILIILAVRAFVATMRGSVDSFADPE*
Ga0075464_108919501	3300006805	Aqueous	MQTVSIAFLLTVAAVNGVLIVLAVRAFLQGLRGSVDSICDPE*
Ga0075473_100566103	3300006875	Aqueous	MQTAAIAVLFAVAAVNGVLIILAVRAFVATMRGSVDSFADPE*
Ga0075472_102143271	3300006917	Aqueous	HGDTMQTAAIAFLFAVAAANAILIILAVRAFLQGMRGSVDSFADPE*
Ga0070745_13584191	3300007344	Aqueous	MQTAAIAFLFAVAAVNGVLIILAVRAFVATMRGSVDSIADPE*
Ga0075458_100136507	3300007363	Aqueous	MQTAAIAFLLAVAAANAILIILAVRAFVATMRGSVDSFADPE*
Ga0075458_100247071	3300007363	Aqueous	DTMQTAAIAFLFAVAAANAILIILAVRAFLQGLRGSVDSIADPE*
Ga0075458_100363531	3300007363	Aqueous	MQTAAIAFLFAVATVNGVLIILAVRAFLQGLRGSVDSICDSE*
Ga0075458_101371133	3300007363	Aqueous	MQTAAIAFLFAVAAANAILIILAVRAFLQGMRGSVDSFADPE*
Ga0114363_10356934	3300008266	Freshwater, Plankton	MQTAAIAFLAAVAAVNGVLIILALRAFLAGMRGSVDSFADPE*
Ga0114363_10383943	3300008266	Freshwater, Plankton	MQTVSIAFLLTVAAVNGVLVVLAVRAFLAGLRGSVDSIADPE*
Ga0114363_10581862	3300008266	Freshwater, Plankton	MQTVSIAFLLTVAAVNGVLVLLAVRAFLAGLRGSVDSIADPE*
Ga0114363_10890124	3300008266	Freshwater, Plankton	MQTVSIAFLLTVAAVNGVLIILALRAFLAGMRGSVD*
Ga0114363_10967971	3300008266	Freshwater, Plankton	MQTIAIAFLFAVAATNGVLILLAVRAFLLGMRGSVDSIADP
Ga0114363_11285781	3300008266	Freshwater, Plankton	AIAFLFAVAATNGVLILLAVRAFLLGMRGSVDSIADPK*
Ga0114363_11310272	3300008266	Freshwater, Plankton	MQTAAIAFLAAVVITNGVLIVLAVRAFVAGLRGSVDSFADPE*
Ga0114363_11448283	3300008266	Freshwater, Plankton	MQTAAIAFLFAVAATNGVLILLAVRAFLLGMRGSVDSIADP
Ga0114363_12406261	3300008266	Freshwater, Plankton	MQTAAIAFLLTVAAVNGVLVVLAVRAFLAGLRGGVDSIADPE*
Ga0114876_10297035	3300008448	Freshwater Lake	MQTAAIAFLFAVAATNGVLILLAVRAFLLGMRGSVDS
Ga0114876_10346757	3300008448	Freshwater Lake	MQTAALAFLAVVAAVNGVLVVLAVRAFLGGLRGSVDSIADPE*
Ga0114876_10591011	3300008448	Freshwater Lake	MQTAAIAFLFAVAATNGVLILLAVRAFLLGMRGSVDSIADPK*
Ga0114876_10876563	3300008448	Freshwater Lake	MQTIAIAFLAAVAAVNGVLIILALRAFLAGMRGSVD*
Ga0114876_10971481	3300008448	Freshwater Lake	MQTAAIAFLAVVAAVNGVLVLLAVRAFLVGLRGSVDSIADPE*
Ga0114876_12126652	3300008448	Freshwater Lake	MQTAAIAFLAVVAAVNGVLILLAVRAFLQGMRGSVDSIPDPE*
Ga0114880_10244122	3300008450	Freshwater Lake	MQTAAIAFLCVVAAANAILIVLAVRAFLQGMRGGVDSICDPE*
Ga0114880_10265452	3300008450	Freshwater Lake	MQTAAIAFLAVAAAVNGVLILLALQAFLRGLRGSVDSIADPE*
Ga0129336_103703232	3300010370	Freshwater To Marine Saline Gradient	MQTAAIAVLAAAAAVNGVLIILALRAFLAGLRGGVDSFADPE*
Ga0153799_10194293	3300012012	Freshwater	MQTAAIAFLFVVAAVNGVLIVLAVRAFLRGLRGGVDSFADPE*
Ga0177922_101142589	3300013372	Freshwater	MQTAAIAFLAVVAAVNGVLVVLAVRAFLAGLRGSVDSFADPE*
Ga0177922_106654183	3300013372	Freshwater	MQTAAIASLFVVAAVNGVLIVLAVRAFLRGLRGSVDSFADWE*
Ga0177922_109682772	3300013372	Freshwater	MQTAAIAFLLTVAAVNGVLVVLAVRAFLAGLRGSVDSF
Ga0177922_110550582	3300013372	Freshwater	MQTAAIAFLATAAAVNGVLILLALRAFLAGLRGGVDSFADWE*
Ga0181352_11474432	3300017747	Freshwater Lake	MQTAAIAFLAVAAAVNGVLILLAVRAFLAGLRGSVDSFADWE
Ga0181353_10630441	3300022179	Freshwater Lake	MQTAAIAFLAVAAAVNGVLILLALRAFLAGLRGSVDSFADWE
Ga0208546_10104273	3300025585	Aqueous	MQTAAIAFLFAVAAANAILIILAVRAFLQGLRGSVDSIADPE
Ga0208546_10316142	3300025585	Aqueous	MQTAAIAFLFAVVMTNGVLIVLAVRAFLQGLRGSVDSICDPE
Ga0208546_10370943	3300025585	Aqueous	MQTAAIAFLFAVAAANGVLIILAVRAFVATMRGSVDSFADPE
Ga0208546_10428221	3300025585	Aqueous	MQTAAIAFLAAAAAVNGILAILAIQAFLATMRGSVDSIDEWE
Ga0208546_10428281	3300025585	Aqueous	MQTAAIAFLFAVAAVNGVLIILAVRAFVATMRGSVDSFADPE
Ga0208546_10541122	3300025585	Aqueous	MQTAAIAFLFAVAAVNGILIMLAVRAFLQGLRGSVDSICDPE
Ga0208546_10583332	3300025585	Aqueous	MQTAAIAFLFAVAAVNGVLILLAVRAFLQGMRGSVDSFADPE
Ga0208147_10058483	3300025635	Aqueous	MQTVSIAFLLTVAAVNGVLIILALRAFLAGLRGSVDSFADPE
Ga0208147_10128452	3300025635	Aqueous	MQTAAIAFLLAVAAANAILIILAVRAFVATMRGSVDSFADPE
Ga0208147_11368582	3300025635	Aqueous	MQTAAIAFLFAVAAVNGVLIILAVRAFVATMRGSVDSIADPE
Ga0208784_10268012	3300025732	Aqueous	MQTAAIAFLAVVVITNGVLIMLAVRAFVATMRGSVDSFADPE
Ga0208005_10097964	3300025848	Aqueous	QTAAIAFLAAVVITNGVLIILAVRAFVATMRGSVDSIADPE
Ga0208005_10675181	3300025848	Aqueous	MQTAAIAFLFAIAAANGVLIILAVRAFLQGMRGSVDSFADPE
Ga0208005_11019512	3300025848	Aqueous	QTAAIAFLLTAAAVNGVLILLAVRAFLQGMRGSVDSFADPE
Ga0208005_11798442	3300025848	Aqueous	MQTAAIAFLFAVAAANAILIILAVRAFVATMRGSVDSFADPE
Ga0208005_12188802	3300025848	Aqueous	MQTAAIAFLFAVAAVNGILIILAVRAFVATMRGSVDSIADPE
Ga0208005_12241611	3300025848	Aqueous	MQTAAIAFLLTAAAVNGVLILLAVRAFLQGMRGSVDSFADPE
Ga0209229_103164571	3300027805	Freshwater And Sediment	MQTAAIAFLAVVVITNGVLVVLAVRAFLAGLRGSVDSIADPE
Ga0209229_103221122	3300027805	Freshwater And Sediment	MQTAAIAFLAVAAAVNGVLIVLAVRAFLQGMRGSVD
Ga0315907_100656861	3300031758	Freshwater	MQTAAIAFLAAVAAVNGVLIILALRAFLAGMRGSVDSFADPE
Ga0315907_108980642	3300031758	Freshwater	MQTVSIAFLLTVAAVNGVLIILALRAFLAGMRGSVD
Ga0315907_111103811	3300031758	Freshwater	MQTAAIAFLAAVVITNGVLIVLAVRAFVAGLRGSVDSFADPE
Ga0315900_1000947418	3300031787	Freshwater	MQTAAIAFLAVVAAVNGVLVLLAVRAFVAGLRGSVDSFADWE
Ga0315900_100381723	3300031787	Freshwater	MQTVSIAFLLTVAAVNGVLVVLAVRAFLAGLRGSVDSIADPE
Ga0315900_102519274	3300031787	Freshwater	MQTAAIAFLLTVAAVNGVLVVLAVRAFLAGLRGGVDSIADPE
Ga0315900_104785033	3300031787	Freshwater	MQTVSIAFLLTVAAVNGVLVVLALRAFLAGLRGSVDSIADPE
Ga0315900_110625922	3300031787	Freshwater	IAFLAAVAATNAILIVLAVRAFLLGMRGSVDSIADPK
Ga0315900_111324241	3300031787	Freshwater	MQTAAIAFLLTVAAVNGVLIILALRAFLAGMRGSVDSIADPE
Ga0315909_101032053	3300031857	Freshwater	MQTIAIAFLFAVAATNGVLILLAVRAFLLGMRGSVDSIADPK
Ga0315909_101458413	3300031857	Freshwater	MQTAAIAFLAVVAAVNGVLILLAVRAFLAGLRGGVDSIADPE
Ga0315909_101578971	3300031857	Freshwater	MQTAAIAFLCVVAAANAILIVLAVRAFLQGMRGGVDSICDPE
Ga0315909_106288153	3300031857	Freshwater	MQTVSIAFLLTVAAVNGVLVVLAFRAFLAGLRGSVDSIADPE
Ga0315909_107861732	3300031857	Freshwater	MQTAAIAFLAVVAAVNGVLVVLAVRAFLAGLRGSVDSFADPE
Ga0315909_108535182	3300031857	Freshwater	VLLAGAPMQTAAIAFLAAAAAVNGVLVVLALRAFLAGMRGSVD
Ga0315904_101663662	3300031951	Freshwater	MQTTAIAFLLVVAAVNGVLILLAVRAFLQGMRGSVD
Ga0315904_103372851	3300031951	Freshwater	MQTVSIAFLLTVAAVNGVLVLLAVRAFLAGLRGSVDSIADPE
Ga0315904_103391593	3300031951	Freshwater	MQTAAIAFLATAAAVNGVLIVLALRAFLAGLRGSVDSFADPE
Ga0315904_104599031	3300031951	Freshwater	MQTAAIAFLLTVAAVNGVLVLLAVRAFLAGLRGSVDSIA
Ga0315904_106765532	3300031951	Freshwater	MQTAAIAFLAAVVAVNGVLILLAVRAFLAGLRGGVDSICDPE
Ga0315904_108032731	3300031951	Freshwater	MQTAAIAFLAAVAATNAILIVLAVRAFLLGMRGSVDSIADPK
Ga0315904_108551532	3300031951	Freshwater	MQTVSIAFLLTVATVNGVLIVLALRAFLAGMRGGVDSICDPE
Ga0315904_109188112	3300031951	Freshwater	AFLFAVAATNAILIVLAVRAFLLGMRGSVDSIADPK
Ga0315901_102531022	3300031963	Freshwater	MQTAAIAFLAAVVAVNGVLILLAVRAFLAGLRGGVDSIADPE
Ga0315901_103255571	3300031963	Freshwater	MQTIAIAFLFAVAATNGVLALLAVRAFLAGLRGSVDSIADPE
Ga0315901_103286812	3300031963	Freshwater	TNHGDTMQTTAIAFLLVVAAVNGVLILLAVRAFLQGMRGSVD
Ga0315901_103609831	3300031963	Freshwater	MQTAAIAFLLTVAAVNGVLVLLAVRAFLAGLRGSVDSFADPE
Ga0315901_108424621	3300031963	Freshwater	AIAFLAAVVAVNGVLILLAVRAFLAGLRGGVDSICDPE
Ga0315902_104552683	3300032093	Freshwater	QTIAIAFLFAVAATNGVLILLAVRAFLLGMRGSVDSIADPK
Ga0315902_104757042	3300032093	Freshwater	MQTAAIAFLAVVAAVNGVLILLAVRAFLQGMRGSVDSIPDPE
Ga0315903_102337551	3300032116	Freshwater	MQTAAIAFLLTAAAVNGVLIVLAVRAFLVGLRGSVDSFADPE
Ga0315903_104168082	3300032116	Freshwater	MQTAAIAFLFAVAATNAILIVLAVRAFLLGMRGSVDSIADPK
Ga0315903_105256171	3300032116	Freshwater	AGAPMQTAAIAFLAAVVAVNGVLILLAVRAFLAGLRGGVDSIADPE
Ga0315903_105620822	3300032116	Freshwater	MQTAAIAFLLTVAAVNGVLVLLAVRAFLAGLRGSVDSIADPE
Ga0315903_108988022	3300032116	Freshwater	MQTAAIAFLAAVAAVNGVLVLLAVRAFLAGLRGSVDSFADWE
Ga0315903_110127721	3300032116	Freshwater	MQTVSIAFLLTVAAVNGVFIILALRAFLAGMRGSVD
Ga0334980_0032025_1801_1929	3300033816	Freshwater	MQTAAIAFLAVTAAVNAILIVLAVRAFLAGLRGSVDSIADPE
Ga0334980_0063878_1331_1459	3300033816	Freshwater	MQTAAIAFLLTVAAVNGVLVVLAARAFLQGLRGSVDSIADPE
Ga0334978_0053413_1941_2069	3300033979	Freshwater	MQTAAIAFLAVAAAVNGVLILLAVRAFLQGLRGDVDSIADPE
Ga0334981_0238097_15_143	3300033980	Freshwater	MQTAAIASLFVVAAVNAILIVLAIRAFLAGLRGSVDSIADPE
Ga0334981_0347399_156_284	3300033980	Freshwater	MQTAAIAFLLTVAAVNGVLVVLAARAFLATMRGSVDSIADPE
Ga0334982_0081481_1591_1719	3300033981	Freshwater	MQTAAIAFLLTAAAVNAILIVLAVRAFLAGLRGSVDSIADPE
Ga0334982_0510916_118_246	3300033981	Freshwater	MQTAAIASLFVVAAVNGVLIVLAVLAFLQGMRGSVDSIADPE
Ga0334994_0526599_352_480	3300033993	Freshwater	MQTAAIAFLAAVVITNGVLVILAVRAFLAGMRGSVDSFADPE
Ga0334986_0296389_85_213	3300034012	Freshwater	MQTAAIAFLFVATAVNGVLIVLAVQAFLQGMRGSVDSIADPE
Ga0334986_0300407_596_724	3300034012	Freshwater	MQTAAIAFLAVAAAVNGVLILLAVRAFLAGMRGSVDSFADPE
Ga0334986_0474345_294_422	3300034012	Freshwater	MQTAAIAFLAVTAAVNGVLILLAVRAFLAGLRGSVDSFADPE
Ga0334986_0527421_120_248	3300034012	Freshwater	MQTAAIAFLAVAAAVNGVLIVLAVRAFLQGLRGSVDSIADPE
Ga0335002_0159998_1184_1312	3300034020	Freshwater	MQTAAIASLFVVAAVNGVLIVLAVRAFLVGMRGSVDSFADPE
Ga0335002_0167891_714_842	3300034020	Freshwater	MQTAAIAFLLTAAAVNAILIVLAIRAFLAGLRGSVDSIADPE
Ga0335002_0621948_410_538	3300034020	Freshwater	MQTLSIAFLAAVVAVNGVLIVLAVRAFLAGLRGSVDSFADPE
Ga0335002_0664537_140_268	3300034020	Freshwater	MQTAAIAFLLTVAAVNGVLVVLAVRAFLAGMRGSVDSIADWE
Ga0334995_0400270_728_856	3300034062	Freshwater	MQTAAIAFLAVAAAVNGVLILLAVRAFFAGMRGSVDSFADPE
Ga0335027_0670897_64_192	3300034101	Freshwater	MQTAAIAFLAVTAAVNGVLILLAVRAFFAGMRGSVDSFADPE
Ga0335031_0389581_599_727	3300034104	Freshwater	MQTAAIAFLLTAAAVNGVLVVLAVRAFLQGLRGSVDSFADPE
Ga0335031_0538224_117_245	3300034104	Freshwater	MQTAAIAFLLTVAAVNGVLIVLALRAFLAGMRGSVDSFADWE
Ga0335063_0257813_37_165	3300034111	Freshwater	MQTAAIAFLAVTAAVNGVLVVLAVRAFLQGLRGSVDSFADPE
Ga0335063_0414866_163_291	3300034111	Freshwater	MQTAAIAFLAVAAAVNGVLIVLAVRAFLAGLRGSVDSFADWE
Ga0335063_0538114_69_197	3300034111	Freshwater	MQTAAIAFLAVAAAVNGVLVVLAVRAFLQGMRGSVDSFADPE
Ga0335066_0100688_3_128	3300034112	Freshwater	QTAAIASLFVVAAVNAILIVLAIRAFLAGLRGSVDSIADPE
Ga0335066_0170937_53_181	3300034112	Freshwater	MQTAAIAFLAVAAAVNGVLILLAVRAFLQGLRGSVDSIADPE
Ga0335053_0275893_44_172	3300034118	Freshwater	MQTAAIAFLAVAAAVNGVLILLAVRAFLQGMRGSVDSFADPE
Ga0335053_0744720_181_309	3300034118	Freshwater	MQTAAIASLLVVAAVNGVLILLAVRAFLAGLRGSVDSFADPE
Ga0335056_0525875_344_472	3300034120	Freshwater	MQTAAIAFLLTAAAVNGVLIVLALQAFLAGMRGSVDSIADPE
Ga0335060_0309965_26_154	3300034122	Freshwater	MQTAAIAFLLTAAAVNGVLILLAVRAFLAGMRGSVDSIADWE
Ga0335049_0495894_1_114	3300034272	Freshwater	MQTVSIAFLAAVVITNGVLIILAIRAFLVGMRGSVDSF
Ga0334997_0545000_569_697	3300034280	Freshwater	MQTAAIAFLLTAAAVNGVLILLAMRAFLQGMRGSVDSIADPE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F058937

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences