Metagenome / Metatranscriptome Family F058880

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F058880
Family Type	Metagenome / Metatranscriptome
Number of Sequences	134
Average Sequence Length	82 residues
Representative Sequence	MEWEILLIMKQAEGTRFTYKDIGKIVDRTEFRENPHWARPLLEKLVFERHIWKEEGYYLYPTDEQRAKERQKQGRVKSGGA
Number of Associated Samples	90
Number of Associated Scaffolds	130

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	10.45 %
% of genes near scaffold ends (potentially truncated)	28.36 %
% of genes from short scaffolds (< 2000 bps)	89.55 %
Associated GOLD sequencing projects	82
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.73

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (97.015 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (30.597 % of family members)
Environment Ontology (ENVO)	Unclassified (42.537 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (47.761 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 44.04% β-sheet: 6.42% Coil/Unstructured: 49.54%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.73
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.73
Powered by PDBe Molstar

Structural matches with SCOPe domains

SCOP family	SCOP domain	Representative PDB	TM-score
a.4.5.0: automated matches	d2xiga_	2xig	0.72827
a.4.5.0: automated matches	d4mtdb_	4mtd	0.70596
a.4.5.0: automated matches	d5nbca_	5nbc	0.70302
a.4.5.0: automated matches	d3mwma_	3mwm	0.69206
a.4.5.0: automated matches	d2fe3a_	2fe3	0.69147

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 130 Family Scaffolds
PF02861	Clp_N	38.46
PF06071	YchF-GTPase_C	6.15
PF00773	RNB	2.31
PF11133	Phage_head_fibr	2.31
PF01799	Fer2_2	1.54
PF07637	PSD5	0.77
PF13091	PLDc_2	0.77
PF07635	PSCyt1	0.77
PF01261	AP_endonuc_2	0.77
PF00575	S1	0.77
PF08450	SGL	0.77
PF06439	3keto-disac_hyd	0.77

COG ID	Name	Functional Category	% Frequency in 130 Family Scaffolds
COG0542	ATP-dependent Clp protease, ATP-binding subunit ClpA	Posttranslational modification, protein turnover, chaperones [O]	38.46
COG0012	Ribosome-binding ATPase YchF, GTP1/OBG family	Translation, ribosomal structure and biogenesis [J]	6.15
COG0557	Exoribonuclease R	Transcription [K]	2.31
COG4776	Exoribonuclease II	Transcription [K]	2.31
COG3386	Sugar lactone lactonase YvrE	Carbohydrate transport and metabolism [G]	0.77
COG3391	DNA-binding beta-propeller fold protein YncE	General function prediction only [R]	0.77

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	97.01 %
Unclassified	root	N/A	2.99 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	97.01 %
Unclassified	root	N/A	2.99 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	97.01 %
Unclassified	root	N/A	2.99 %

Name	Rank	Taxonomy	Distribution
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	91.04 %
Unclassified	root	N/A	2.99 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.75 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	91.04 %
Unclassified	root	N/A	2.99 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.75 %

Name	Rank	Taxonomy	Distribution
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	77.61 %
Verrucomicrobiae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae	2.99 %
Unclassified	root	N/A	2.99 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.75 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	77.61 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	2.99 %
Unclassified	root	N/A	2.99 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.75 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	77.61 %
Verrucomicrobia subdivision 3	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3	2.99 %
Unclassified	root	N/A	2.99 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.75 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	77.61 %
Pedosphaera	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera	2.99 %
Unclassified	root	N/A	2.99 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.75 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	77.61 %
Pedosphaera parvula	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	2.99 %
Unclassified	root	N/A	2.99 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.75 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	77.61 %
Pedosphaera parvula Ellin514	strain	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula → Pedosphaera parvula Ellin514	2.24 %
Unclassified	root	N/A	2.99 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.75 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002908\|JGI25382J43887_10267088	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	776	Open in IMG/M
3300005166\|Ga0066674_10082881	All Organisms → cellular organisms → Bacteria	1478	Open in IMG/M
3300005172\|Ga0066683_10559872	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	697	Open in IMG/M
3300005174\|Ga0066680_10616679	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	677	Open in IMG/M
3300005175\|Ga0066673_10444075	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	762	Open in IMG/M
3300005177\|Ga0066690_10604289	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	732	Open in IMG/M
3300005180\|Ga0066685_10420727	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	928	Open in IMG/M
3300005180\|Ga0066685_10420727	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	928	Open in IMG/M
3300005186\|Ga0066676_11126992	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	516	Open in IMG/M
3300005330\|Ga0070690_100274368	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1201	Open in IMG/M
3300005440\|Ga0070705_101226596	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	619	Open in IMG/M
3300005441\|Ga0070700_101752420	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	534	Open in IMG/M
3300005444\|Ga0070694_101507286	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	569	Open in IMG/M
3300005445\|Ga0070708_100058905	All Organisms → cellular organisms → Bacteria	3423	Open in IMG/M
3300005445\|Ga0070708_101114191	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	739	Open in IMG/M
3300005446\|Ga0066686_10877397	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	591	Open in IMG/M
3300005447\|Ga0066689_10672794	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	649	Open in IMG/M
3300005447\|Ga0066689_10975205	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	522	Open in IMG/M
3300005450\|Ga0066682_10374643	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	915	Open in IMG/M
3300005466\|Ga0070685_10844513	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	678	Open in IMG/M
3300005467\|Ga0070706_101958710	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	531	Open in IMG/M
3300005468\|Ga0070707_100549829	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1117	Open in IMG/M
3300005540\|Ga0066697_10336567	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	881	Open in IMG/M
3300005544\|Ga0070686_100401326	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1043	Open in IMG/M
3300005556\|Ga0066707_10191604	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1315	Open in IMG/M
3300005556\|Ga0066707_10570447	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	727	Open in IMG/M
3300005556\|Ga0066707_11031658	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	501	Open in IMG/M
3300005569\|Ga0066705_10973284	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	503	Open in IMG/M
3300005576\|Ga0066708_10619405	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	692	Open in IMG/M
3300005617\|Ga0068859_100394823	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1479	Open in IMG/M
3300006791\|Ga0066653_10193414	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1027	Open in IMG/M
3300006796\|Ga0066665_10433773	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1085	Open in IMG/M
3300007255\|Ga0099791_10317623	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	744	Open in IMG/M
3300009012\|Ga0066710_100048026	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	5242	Open in IMG/M
3300009012\|Ga0066710_100122399	All Organisms → cellular organisms → Bacteria	3548	Open in IMG/M
3300009012\|Ga0066710_100232571	All Organisms → cellular organisms → Bacteria	2652	Open in IMG/M
3300009012\|Ga0066710_100567359	All Organisms → cellular organisms → Bacteria	1719	Open in IMG/M
3300009012\|Ga0066710_100834953	All Organisms → cellular organisms → Bacteria	1414	Open in IMG/M
3300009012\|Ga0066710_102511541	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	744	Open in IMG/M
3300009012\|Ga0066710_104459283	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	523	Open in IMG/M
3300009094\|Ga0111539_10464629	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1474	Open in IMG/M
3300009094\|Ga0111539_10464629	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1474	Open in IMG/M
3300009137\|Ga0066709_100132952	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	3139	Open in IMG/M
3300009137\|Ga0066709_100132952	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	3139	Open in IMG/M
3300009137\|Ga0066709_100203410	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2604	Open in IMG/M
3300009137\|Ga0066709_100274769	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2272	Open in IMG/M
3300009137\|Ga0066709_100346137	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2040	Open in IMG/M
3300009137\|Ga0066709_100459641	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1782	Open in IMG/M
3300009137\|Ga0066709_102133175	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	774	Open in IMG/M
3300009143\|Ga0099792_10834731	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	606	Open in IMG/M
3300009156\|Ga0111538_10772752	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1216	Open in IMG/M
3300009156\|Ga0111538_13265984	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	564	Open in IMG/M
3300010301\|Ga0134070_10296628	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	615	Open in IMG/M
3300010304\|Ga0134088_10096451	Not Available	1389	Open in IMG/M
3300010322\|Ga0134084_10266186	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	625	Open in IMG/M
3300010323\|Ga0134086_10128051	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	914	Open in IMG/M
3300010329\|Ga0134111_10343091	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	630	Open in IMG/M
3300010337\|Ga0134062_10694369	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	534	Open in IMG/M
3300010337\|Ga0134062_10751731	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	517	Open in IMG/M
3300010397\|Ga0134124_10213477	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1758	Open in IMG/M
3300010399\|Ga0134127_13563265	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	510	Open in IMG/M
3300010400\|Ga0134122_11320509	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	730	Open in IMG/M
3300011270\|Ga0137391_10855996	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	746	Open in IMG/M
3300012198\|Ga0137364_10607966	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	824	Open in IMG/M
3300012199\|Ga0137383_10668866	Not Available	759	Open in IMG/M
3300012199\|Ga0137383_10868522	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	659	Open in IMG/M
3300012201\|Ga0137365_10143698	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula → Pedosphaera parvula Ellin514	1794	Open in IMG/M
3300012201\|Ga0137365_10365521	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1065	Open in IMG/M
3300012201\|Ga0137365_10766404	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	705	Open in IMG/M
3300012202\|Ga0137363_11698029	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	524	Open in IMG/M
3300012204\|Ga0137374_10598067	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	841	Open in IMG/M
3300012204\|Ga0137374_11287043	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	505	Open in IMG/M
3300012206\|Ga0137380_10063282	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula → Pedosphaera parvula Ellin514	3386	Open in IMG/M
3300012206\|Ga0137380_10063282	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula → Pedosphaera parvula Ellin514	3386	Open in IMG/M
3300012206\|Ga0137380_10354217	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1309	Open in IMG/M
3300012206\|Ga0137380_10878773	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	771	Open in IMG/M
3300012207\|Ga0137381_11183159	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	657	Open in IMG/M
3300012207\|Ga0137381_11269288	Not Available	629	Open in IMG/M
3300012209\|Ga0137379_10477223	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1155	Open in IMG/M
3300012210\|Ga0137378_11218052	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	669	Open in IMG/M
3300012211\|Ga0137377_10944988	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	793	Open in IMG/M
3300012211\|Ga0137377_11282268	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	663	Open in IMG/M
3300012211\|Ga0137377_11460804	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	611	Open in IMG/M
3300012211\|Ga0137377_11723534	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	548	Open in IMG/M
3300012353\|Ga0137367_10082671	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2374	Open in IMG/M
3300012353\|Ga0137367_10310114	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1128	Open in IMG/M
3300012354\|Ga0137366_10565035	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	818	Open in IMG/M
3300012356\|Ga0137371_10704144	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	772	Open in IMG/M
3300012357\|Ga0137384_11011844	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	668	Open in IMG/M
3300012358\|Ga0137368_10154523	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1690	Open in IMG/M
3300012359\|Ga0137385_11600952	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	515	Open in IMG/M
3300012361\|Ga0137360_11694356	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	538	Open in IMG/M
3300012362\|Ga0137361_10287844	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1502	Open in IMG/M
3300012362\|Ga0137361_10602838	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1006	Open in IMG/M
3300012362\|Ga0137361_11372323	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	630	Open in IMG/M
3300012362\|Ga0137361_11405866	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	621	Open in IMG/M
3300012363\|Ga0137390_10402176	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1348	Open in IMG/M
3300012917\|Ga0137395_10690008	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	739	Open in IMG/M
3300012917\|Ga0137395_10724606	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	720	Open in IMG/M
3300012930\|Ga0137407_10470582	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1171	Open in IMG/M
3300014166\|Ga0134079_10088939	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1160	Open in IMG/M
3300014166\|Ga0134079_10454457	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	608	Open in IMG/M
3300015359\|Ga0134085_10072542	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1402	Open in IMG/M
3300015359\|Ga0134085_10416493	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	605	Open in IMG/M
3300015371\|Ga0132258_10382103	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	3493	Open in IMG/M
3300015371\|Ga0132258_11886219	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1505	Open in IMG/M
3300015374\|Ga0132255_104750796	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	575	Open in IMG/M
3300017656\|Ga0134112_10100814	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1085	Open in IMG/M
3300017657\|Ga0134074_1135974	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	855	Open in IMG/M
3300018071\|Ga0184618_10177143	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	883	Open in IMG/M
3300018469\|Ga0190270_10160297	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1843	Open in IMG/M
3300018482\|Ga0066669_11167326	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	695	Open in IMG/M
3300018482\|Ga0066669_12083466	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	534	Open in IMG/M
3300020005\|Ga0193697_1043731	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1117	Open in IMG/M
3300021344\|Ga0193719_10120110	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1142	Open in IMG/M
3300025910\|Ga0207684_10389154	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1199	Open in IMG/M
3300025922\|Ga0207646_11153338	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	681	Open in IMG/M
3300025936\|Ga0207670_10002742	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	9275	Open in IMG/M
3300025936\|Ga0207670_11070009	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	680	Open in IMG/M
3300026324\|Ga0209470_1344773	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	536	Open in IMG/M
3300026327\|Ga0209266_1245841	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	580	Open in IMG/M
3300026538\|Ga0209056_10228943	All Organisms → cellular organisms → Bacteria	1336	Open in IMG/M
3300026538\|Ga0209056_10413438	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	814	Open in IMG/M
3300026538\|Ga0209056_10609847	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	550	Open in IMG/M
3300026540\|Ga0209376_1362373	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	545	Open in IMG/M
3300026548\|Ga0209161_10351022	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	661	Open in IMG/M
3300027748\|Ga0209689_1371907	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	547	Open in IMG/M
3300027821\|Ga0209811_10241531	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	688	Open in IMG/M
3300027903\|Ga0209488_10616829	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	785	Open in IMG/M
3300030990\|Ga0308178_1136025	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	553	Open in IMG/M
3300031099\|Ga0308181_1077093	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	684	Open in IMG/M
3300031099\|Ga0308181_1180656	Not Available	510	Open in IMG/M
3300031424\|Ga0308179_1038767	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	588	Open in IMG/M
3300032180\|Ga0307471_102018202	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	724	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	94.03%
Host-Associated	Host-Associated	5.97%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	93.28%
Plants	Host-Associated → Plants	5.97%
Aquatic	Environmental → Aquatic	0.75%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	93.28%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.99%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.99%
Sediment	Environmental → Aquatic → Sediment	0.75%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	82.09%
Loam	Environmental → Terrestrial → Soil → Loam	11.19%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.99%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.24%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.75%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.75%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	48.51%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	32.84%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	10.45%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.99%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.24%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.75%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.75%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.75%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.75%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	30.60%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	20.15%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	12.69%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	9.70%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.22%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	3.73%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.99%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.24%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.24%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.75%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.75%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.75%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.75%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.75%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002908	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300010301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015	Environmental	Open in IMG/M
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental	Open in IMG/M
3300010322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015	Environmental	Open in IMG/M
3300015359	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017656	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015	Environmental	Open in IMG/M
3300017657	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09212015	Environmental	Open in IMG/M
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300020005	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3m2	Environmental	Open in IMG/M
3300021344	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300026324	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)	Environmental	Open in IMG/M
3300026327	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132 (SPAdes)	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300026540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134 (SPAdes)	Environmental	Open in IMG/M
3300026548	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)	Environmental	Open in IMG/M
3300027748	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)	Environmental	Open in IMG/M
3300027821	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300030990	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_149 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031099	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_152 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031424	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_150 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25382J43887_102670881	3300002908	Grasslands Soil	MEWEILQVMKQAEGTRFTYKDIGKIVDRKEFRENPHWARPLLEKMLFERLIWKNEGYYFYPTEEQKAKERQKQGSSKAVGV*
Ga0066674_100828812	3300005166	Soil	MEWEILLIMKQAEGTRFTHKDIGKIVDRKEFRENPHWARPMLEKLLFERHIWKEDGYYLYPTDEQRAKERQKQGRVKSDGA*
Ga0066683_105598722	3300005172	Soil	LVAFPQIRLTVLTIMEWEILLILKQAEGTRFTYKDIGKIVDRTEFRENPHWARPILEKLLFERHIWKEEGYYLYPTEEQRAKARQKQGRVKSGGA*
Ga0066680_106166791	3300005174	Soil	MEWEILLIMKQAEGTRFTYKDIGKIVDRTEFRENPHWARPLLEKLVFERHIWKEDGYYVYPTDEQRAKERQKQGRVKSDGA*
Ga0066673_104440752	3300005175	Soil	MEWEILLIMKQAEGTRFTYKDIGKIVDRTEFRENPHWARPLLEKLVFERHIWKEEGYYLYPTDEQRAKARQKQGR
Ga0066690_106042892	3300005177	Soil	MEWEILLILKQAEGTRFTYKHIGKIVDRKESRENPHWARPILEKLVFERHIWKEDGYYVYPTDEQRAKERQKQGRVKSDGA*
Ga0066685_104207271	3300005180	Soil	MEWEILQIMKQAEGVRFTYKDIGKIVDRQEYRENPHWARPILEKMVFERLIWKVEGYYLYPTEEQKAKERQKQGRE*
Ga0066685_104207272	3300005180	Soil	MEWEILQIMKQAEGVRFTYKDIGKIVDRKEFRENPHWARPMLEKLLFERHIWKEEGYYLYPTEEQRAKARQKQGRVKSGGGESQNL*
Ga0066676_111269921	3300005186	Soil	MEWEILQIMKQAEGTRFTYKDIGKIVDRKEFRENAHWARPILEKMVFERLIWKVEGYYLYPTEEQKAKERQ
Ga0070690_1002743682	3300005330	Switchgrass Rhizosphere	MEWEILQIMKQAEGTLFTSKDIGKIVDRKEFRENPHWARPILEKMVFERLIWKAESYYLCPTEEQKARERQKQGRVKVGAEA*
Ga0070705_1012265962	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MEWEILLIMKQAEGTCFTYKDIGKLVDRKEFRENPHWARPLLEKMVFERLIWKADSYYLYPTEEQKAKERQKQGRVKVGA*
Ga0070700_1017524201	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	MEWEILVIMKQAEGILFTSKDIGKIVDRKEFRENPHWARPILEKMVFERLIWKAESYYLYPTEEQKAKERQKQGRVKEGQQ*
Ga0070694_1015072861	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MKQAEGTLFTSKDIGKIVDRKEFRENPHWARPILEKMVFERLIWKAESYYLYPTEEQKAKERQKQGRVKEGQQ*
Ga0070708_1000589051	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MEWEILLILKQAEGTRFTYKHIGKIVDRKESRENPHWARPLLEKLVFERHIWKEDGYYLYPTDEQRARERQKQGRVKSGGA*
Ga0070708_1011141912	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MEWEILQIMKQAEGIRFTYKDIGKIVDRKEFRENPHWARPILEKMLFERLIWKVEGFYLYPTEEMKAKERQKQARE*
Ga0066686_108773971	3300005446	Soil	MEWEILQIMKQAEGVRFTYKDIGKIVDRKEFRENPHWARPVLERMVFERLIWKDEGYYLYPTEEQKAKERQKQGRVKSGGVESKNLEANR*
Ga0066689_106727941	3300005447	Soil	MEWEILLIMKQAEGTRFTYKDIGKIVDRTEFRENPHWARPLLEKLLFERHIWKEEGYYLYPTEEQRAKARQKQGRVKSGGVESQNL*
Ga0066689_109752051	3300005447	Soil	MELEILQVMKQAAGTRFSYKEIGKIIDRNQFREDAHWARPMLEKLAFERLIWKDDAFYLYPTDEQKAEH
Ga0066682_103746432	3300005450	Soil	MEWEILLIMKQAEGTRFTYKDIGKIVDRTEFRENPHWARPLLEKLVFERHIWKEEGYYLYPTDEQRAKERQKQGRVKSGGA*
Ga0070685_108445131	3300005466	Switchgrass Rhizosphere	MEWEILVIMKQAEGILFTSKDIGKIVDRKEFRENPHWARPILEKMVFERLIWKAESYYLYPTEEQKAKERQKQGRVKVGSEGQ*
Ga0070706_1019587101	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MILKQAEGTRFTYKNIGKMVDRKESRENPHWARPILEKLVFERHIWKVEGYYVYPTDEERAVERKKQGAVKSGGA*
Ga0070707_1005498292	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MEWEILLILKQAEGTRFTYKNIGKMVDRKESRENPHWARPILEKLVFERHIWKEDGYYLCPTEEQRAVERQKQGRTKSGGA*
Ga0066697_103365672	3300005540	Soil	MEWEILLIMKQAEGTRFTYKDIGKIVDRTEFRENPHWARPLLEKLVFERHIWKEEGYYLYPTDEQRAKARQKQGRVKSGGVESQNL*
Ga0070686_1004013262	3300005544	Switchgrass Rhizosphere	MEWEILVIMKQAEGILFTSKDIGKIVDRKEFRENPHWARPILEKMVFERLIWKAESYYLCPTEEQKARERQKQGRVKVGAEA*
Ga0066707_101916041	3300005556	Soil	MEWQIIQVMKQAAGIRFSFKEIGRIVDRREFRENPHWARPLLEKLTCERIIWKEEAFYLYPTDEQRDEYRKTQGKVRSTA
Ga0066707_105704472	3300005556	Soil	LKQAEGTRFTYKDIGKIVDRKEFRENPHWARPHLERMVFERFIWKDEGYYLYPTEEMKAKERQKQGRVRSEGVECRSLEANR*
Ga0066707_110316582	3300005556	Soil	MEWEILQIMKQAEGVRFTYKDIGKIVDRKEFRENPHWARPVLERMVFERLIWKDEGYYLYPTEEQKAKERQKQGRVK
Ga0066705_109732841	3300005569	Soil	MELEILQVMKQAAGTRFSYKEIGKLVDREAYRENAHWARPILEKLAFERHIWKDDAFYLYPTEDQKSEHR
Ga0066708_106194052	3300005576	Soil	LAACPQIRLTVLTIMEWEILLIMKQAEGTRFTYKDIGKIVDRTEFRENPHWARPLLEKLVFERHIWKEEGYYLYPTDEQRAKERQKQGRVKSGGA*
Ga0068859_1003948232	3300005617	Switchgrass Rhizosphere	MKQAEGTLFTSKDIGKIVDRKEFRENPHWARPILEKMVFERLIWKAESYYLCPTEEQKARERQKQGRVKVGAEA*
Ga0066653_101934142	3300006791	Soil	MEWEILLIMKQAEGICFNYKEIGKLVDRKEFRENPHWARPLLEKMVFERLIWKADSYYVYPTEEQKAKERQKQGRVKVGA*
Ga0066665_104337732	3300006796	Soil	MKQAEGTRFTYKDIGKIVDRKEFRENPHWARPHLERMVFERFIWKDEGYYLYPTEEMKAKERQKQGRVRSEGVECRSLEANR*
Ga0099791_103176231	3300007255	Vadose Zone Soil	MEWEILQVMKQAEGVRFTYKDIGRIVDRKEFRENPHWARPILERMVFERFIWKDEGFYLYPTEEMKAKERQKQGREQPGGGGSKSK*
Ga0066710_1000480263	3300009012	Grasslands Soil	MEWQIIQVMKQAAGIRFSFKEIGRIVDRREFRENPHWARPLLEKLTCERIIWKEEAFYLYPTDEQRDEYRKTQGKVRSTAVQTHSLPEAK
Ga0066710_1001223994	3300009012	Grasslands Soil	MEWEILLIMKQAEGTRFTYKDIGKIVDRKEFRENPHWARPLLEKLLFERHIWKQEGYYVYPTDEQRAKERNKHGAVKSGGV
Ga0066710_1002325711	3300009012	Grasslands Soil	MEWEILLIMKQAEGTRFTYKDIGKIVDRTEFRENPHWARPLLEKLVFERHIWKEEGYYLYPTDEQRAKERQKQGRVKSGGA
Ga0066710_1005673591	3300009012	Grasslands Soil	MEWEILQIMKQAEGVRFTYKDIGKIVDRQEYRENPHWARPILEKMVFERLIWKVEGYYLYPTEEQKAKERQKQGRVKS
Ga0066710_1008349532	3300009012	Grasslands Soil	MEWEILQIMKQAEGVRFSYKDIGKIVDRKEFRENPHWARPILERMVFERFIWKDEGFYLYPTEEMKAKERQKQGRANTGAVECQSL
Ga0066710_1025115412	3300009012	Grasslands Soil	MEWEFLQVMKQAEGTRFTYKDIGKIVDRKEFRENPHWARPILEKMVFERLIWKDEGYYLYPTEEQKAKERQKQGRVKSGGVESKNLEANR
Ga0066710_1044592832	3300009012	Grasslands Soil	MELEILQVMKQAAGTRFSYKEIGKLVDRKAYRENAHWARPILEKLAFERHIWKDDAFYLYPTEDQKSEH
Ga0111539_104646292	3300009094	Populus Rhizosphere	MEWQILQIMKQAEGVRFTYKDIGKIVDRKEFRENPHWARPILERMVFDRFIWKDEGFYLYPTEEMKAKERQRQGRVQSGGVESKNLEVNK*
Ga0111539_104646293	3300009094	Populus Rhizosphere	MEWEILQIMKQAEGTRFSYKDIGKLVDRKEFRENPHWARPILEKLLFERLIWKVEGYYLYPTEEQRAKERQKQGAKSGGDANKSV*
Ga0066709_1001329522	3300009137	Grasslands Soil	MEWEILQIMKQAEGVRFTYKDIGKIVDRKEFRENAHWARPILEKMVFERLIWKDEGYYLYPTEEMKAKERQKQGRE*
Ga0066709_1001329523	3300009137	Grasslands Soil	MEWEILQIMKYAEGTRFTYKDIGKIVDRKEFRENPHWARPHLERMVFERLIWKDEGYYLYPTEEMKAKERQKQGRVRSEGVESRSLEANK*
Ga0066709_1002034104	3300009137	Grasslands Soil	MEWEILLIMKQAEGTRFTYKDIGKIVDRTEFRENPHWARPLLEKLLFERHIWKEEGYYLYPTDEQRAKERQKQGRVKSGGA*
Ga0066709_1002747692	3300009137	Grasslands Soil	MEWEILQIMKQAEGVRFTYKDIGKIVDRKEFRENPHWARPVLERMVFERLIWKDEGYYLYPTEEQKAKERQKQGRVKSGGVESKNLEATM*
Ga0066709_1003461372	3300009137	Grasslands Soil	MEWEILLIMKQAEGTRFTYKDIGKIVDRKEFRENPHWARPLLEKLLFERHIWKQEGYYVYPTDEQRAKERNKHGAVKSGGV*
Ga0066709_1004596412	3300009137	Grasslands Soil	MEWQIIQVMKQAAGIRFSFKEIGRIVDRREFRENPHWARPLLEKLTCERIIWKEEAFYLYPTDEQRDEYRKTQGKVRSTAVQTHSLPEAK*
Ga0066709_1021331752	3300009137	Grasslands Soil	MQFRLISFEQFMEWEILQIMKQAEGVRFSYKDIGKIVDRKEFRENPHWARPVLEKMVFERLIWKVEGFYLYPTEEQKAKERQKQGRAKPGGA*
Ga0099792_108347311	3300009143	Vadose Zone Soil	MEWEILLILKQAEGTRFTYKNIGKMVDRKESRENPHWARPILEKLVFERHIWKEDGYYIYPTEAQRAEERQKQGRAKSG
Ga0111538_107727521	3300009156	Populus Rhizosphere	TIMEWEILQIMKQAEGTRFSYKDIGKLVDRKEFRENPHWARPILEKLLFERLIWKVEGYYLYPTEEQRAKERQKQGAKSGGDANKSV*
Ga0111538_132659841	3300009156	Populus Rhizosphere	EGVRFTYKDIGKIVDRKEFRENPHWARPLLEKMVFERLIWKDEGFYIYPTEEMKAKERQKQGERK*
Ga0134070_102966281	3300010301	Grasslands Soil	TVLTIMEWEILQIMKQAEGVRFTYKDIGKIVDRQEYRENPHWARPILEKMVFERLIWKVEGYYLYPTEEQKAKERQKQGRE*
Ga0134088_100964512	3300010304	Grasslands Soil	MEWEILQIMKQAEGVRFSYKDIGKIVDRKEFRENPHWARPVLEKMVFERLIWKVEGFYLYPTEEQKAKERQKQGREKPGGA*
Ga0134084_102661861	3300010322	Grasslands Soil	MEWEILLIMKQAEGTRFTYKDIGKIVDRTEFRENPHWARPLLEKLVFERHIWKEEGYFLYPTDEQRAKERQKQGRVKSGGA*
Ga0134086_101280512	3300010323	Grasslands Soil	MEWEILLIMKQAEGTRFTYKDIGKIVDRTEFRENPHWARPLLEKLVFERHIWKEEGYYLYPTDEQRAKERQKQGRVKSDGA*
Ga0134111_103430911	3300010329	Grasslands Soil	RLTVLTIMEWEILLIMKQAEGTRFTYKDIGKIVDRTEFRENSHWARPLLEKLLFERHIWKEEGYYLYPTEEQRAKARQKQGRVKSGGVESQNL*
Ga0134062_106943692	3300010337	Grasslands Soil	IMKQAEGTRFTYKDIGKIVDRTEFRENPHWARPILEKLLFERHIWKEEGYYLYPTDEERAKERSKQGGVKSGGV*
Ga0134062_107517311	3300010337	Grasslands Soil	MEWEILLIMKQAEGTRFTYKDIGKIVDRTEFRENPHWARPLLEKLLFERHIWKEEGYYLYPTEEQRAKARQKQG
Ga0134124_102134772	3300010397	Terrestrial Soil	MEWEILLIMKQAEGILFTYKDIGKLVDRKEFRENPHWARPVLEKMLFERLIWKQDSYYFYPTEEQKAKERQKQGRVKVGA*
Ga0134127_135632651	3300010399	Terrestrial Soil	IMEWEILQIMKQAEGTRFSYKDIGKIVDRKEFRENPHWARPVLERMVFERLIWKVEGYYLYPTEEQKAQERQKQGAKSGGDGNKSV*
Ga0134122_113205092	3300010400	Terrestrial Soil	MEWEILLILKQAVGTRFTYKHIGKMVDRQEARENPHWARPILEKLVFERHIWKQEGYYVYPTDEERALERKKQGAVKSGGV*
Ga0137391_108559961	3300011270	Vadose Zone Soil	MEWEILQIMKQAEGVRFSYKDIGKIVDRKEFRENPHWARPLLERMTFERLIWKDEGYYLYPTEEQKAKERQKQGRANPGGVESRNLEVNK*
Ga0137364_106079662	3300012198	Vadose Zone Soil	MEWEILLILKQSEGTRFTYKDIGKIVDRKEFRENPHWARPLLEKLLFERHIWKQEGYYLYPTDEQRAKERQKHGRVKSGGA*
Ga0137383_106688661	3300012199	Vadose Zone Soil	TRFTYKHIGKMVDRKESRENPHWAKPLLEKLVFERHIWKQEGYYLYPTDEQRAKERQKQGAVKSGGA*
Ga0137383_108685221	3300012199	Vadose Zone Soil	MEWEILLVMKQAEGTRFTYKDIGKIVDRTEFRENPHWARPILEKLVFERHIWKEDGYYVYPTDEQRAKERQKQGRVKS
Ga0137365_101436982	3300012201	Vadose Zone Soil	MEWEILVIMKQAEGTRFTYKDIGKIVDRKEFRENPHWARPLLEKLLFERHIWKQDGYYFYPTEEQRAKERQKQGRVKSGGA*
Ga0137365_103655211	3300012201	Vadose Zone Soil	MEWEILQVMKQAEGVRFTYKDIGRIVDRKEFRENPHWARPLLERMVFERLVWKDDGYYLYPTEEMKAKERQRQGRVRCEGVESRNLEANK*
Ga0137365_107664041	3300012201	Vadose Zone Soil	MEWEILQIMKQAEGTRFTSKDIGKIVDRKEYRENPYWARPMLEKLLFERHIWKQEGYYLYPTEEQRAKERSKQGAVKSGGV*
Ga0137363_116980291	3300012202	Vadose Zone Soil	MEWEILQVMKQAEGVRFTYKDIGRIVDRKEFRENPHWARPILERMVFERFIWKDEGFYLYPTEEMKAKERQKQGRE*
Ga0137374_105980671	3300012204	Vadose Zone Soil	MEWEILQIMKQAEGIRFTYKDIGKIVDRKEFRENPHWARPILEKMLFERLIWKVDGYYLYPTEEMKAKERQKQGGDKPGVGSNK*
Ga0137374_112870432	3300012204	Vadose Zone Soil	MEWEILQIMKQAEGTRFTYKDIGKIVDRKEFRENPHWARPHLERMVCERLIWKDEGYYLYPTEEMKAKERQKQGRVKFEGVESRSLEANK*
Ga0137380_100632823	3300012206	Vadose Zone Soil	MEWEILQIMKQAEGTRFTYKDIGKIVDRKEFRENPHWARPLLERMTFERLIWKDEGYYLYPTEEQKAKERQRQGRVKSERVESRNLEANK*
Ga0137380_100632824	3300012206	Vadose Zone Soil	MEWEILQIMKQAEGVRFSYKDIGKIVDRKEFRENAHWARPILEKMVFERLIWKVQGFYLYPTEEQKAKERQKQGKE*
Ga0137380_103542172	3300012206	Vadose Zone Soil	MEWEILLILKQAEGTRFTYKHIGKIVDRKESRENPHWARPLLEKLVFERHIWKEDGYYLYPTDEQRARERQKQGRVESGGA*
Ga0137380_108787731	3300012206	Vadose Zone Soil	MEWEILQIMKQAEGIRFTYKDIGKIVDRKEFRENAHWARPILEKMVFERLIWKDEGYYLYPTEEMKAKERQKQ
Ga0137381_111831591	3300012207	Vadose Zone Soil	MEWEILQILKQAEGTRFTYKDIGKIVDRKEFRENPHWARPHLERMVFERFIWKDEGYYLYPTEEMKAKERQKQGRVRSEGVECRSLEANR*
Ga0137381_112692881	3300012207	Vadose Zone Soil	VMKQAEGTRFTYKDIGKIVDRKEFRENPHWARPILEKMVFERLIWKEEGYYLYPTEEQKAKARQKQGRVKSGGVESKNLEANK*
Ga0137379_104772232	3300012209	Vadose Zone Soil	MEWEILQIMKQAEGVRFTYKDIGKIVDRKEFRENAHWARPILEKMVFERLIWKVEGYYLYPTEEMKAKERQKQGRE*
Ga0137378_112180521	3300012210	Vadose Zone Soil	MEWEILVIMKQAEGTLFTSKDIGKIVDRKEFRENPHWARPILEKMVFERLIWKQGGHYVYPTEEERAKERQKQGRVKSGGA*
Ga0137377_109449881	3300012211	Vadose Zone Soil	MEWEILQIMKQAEGTRFTSKDIGKIVDRKEYRENPYWARPILEKMVFERLIWKDEGYYLYPTEEMKAKERQKQGRE*
Ga0137377_112822682	3300012211	Vadose Zone Soil	MEWQILQIMKQAEGTRFTYKDIGKIVDRKEFRENSHWARPILERMVFERFIWKDEGYYLYPTEEMKAKERQKQGRANPGAVEC
Ga0137377_114608041	3300012211	Vadose Zone Soil	MEWEILLIMKQAEGTRFTYKDIGKIVDRTEFRENPHWARPILEKLLFERHIWKEEGYYLYPTDEQRAKARQKQGRVKSGGVESQNL*
Ga0137377_117235342	3300012211	Vadose Zone Soil	MEWEILLIMKQAEGTRFTSKDIGKIVDRKEYRENPHWARPMLEKLLFERHIWKQEGYYVYPTDEQRAKERN
Ga0137367_100826711	3300012353	Vadose Zone Soil	MEWEILQIMKQAEGIRFTYKDIGKIVDRKEFRENPHWARPILEKMLFERLIWKVDGYYLYPTEEMKAKERQTQGGDKPGVGSNK*
Ga0137367_103101142	3300012353	Vadose Zone Soil	MEWEILLVMKQAEGTRFTYKHIGKIVDRTESRENPHWARPLLEKLVFERHIWKEEGYYLYPTEEQRAKERQKQGRVKVGGFESQNP*
Ga0137366_105650352	3300012354	Vadose Zone Soil	MEWEILLILKQAEGTRFTYKNIGKMVDRKEARENPHFARPILEKLVFERHIWKVEGYYVYPTDEERAKERKKQGAVKSDGA*
Ga0137371_107041442	3300012356	Vadose Zone Soil	MEWEILLMLKQAEGTRFTYKNIGKMVDRKESRENPHWAKPLLEKLVFERHIWKQEGYYLYPTDEQRAKERQKQGAVRSGGA*
Ga0137384_110118441	3300012357	Vadose Zone Soil	MEWEILLILKQAEGTRFTYKHIGKIVDRKESRENPHWARPHLERMTFERLIWKDEGYYLYPTEEQKAKERQRQGRVKSERVESRNLEANK*
Ga0137368_101545232	3300012358	Vadose Zone Soil	MEWEILLVMKQAEGTRFTYKHIGKMVDRKESRENPHWAKPLLEKLVFERHIWKQEGYYLYPSDEQRAKERQRQGAVKSGGA*
Ga0137385_116009521	3300012359	Vadose Zone Soil	MEWEILVIMKQAEGTLFTSKDIGKIVDRKEFRENPHWARPILEKMVFERLIWKQGGHYVYPTEEERAKERQKQGRVKS
Ga0137360_116943562	3300012361	Vadose Zone Soil	MEWEILLILKQAEGTRFTYKNIGKMVDRKESRENPHWARPILEKLVFERHIWKEDGYYIYPTEAQRAEERQKQGRANPGGVENRSLEA
Ga0137361_102878441	3300012362	Vadose Zone Soil	MEWEILQIMKQAEGVRFSYKDIGKIVDRKEFRENPHWARPVLEKMVFERLIWKVEGFYLYPTEEQKAKERQKQGRAQAGGGRK*
Ga0137361_106028381	3300012362	Vadose Zone Soil	MEWEILLILKQAEGTRFTYKNIGKMVDRKESRENPHWARPILEKLVFERHIWKEDGYYIYPTEAQRAEERQKQGRAKSGGA*
Ga0137361_113723232	3300012362	Vadose Zone Soil	MEWEVLQVMKQAEGTRFTSKDIGKIVDRKEYRENPHWARPMLEKLLFERHIWKQEGYYLYPTDEQRAKARQKQERVKSGGVESQNL*
Ga0137361_114058661	3300012362	Vadose Zone Soil	MEWEILQVMKQAEGVRFTYKDIGRIVDRKEFRENPHWARPILERMVFERFIWKDEGFYLYPTEEMKARERQKQGRFKSGVVECQSLQGDK*
Ga0137390_104021762	3300012363	Vadose Zone Soil	MEWEILLILKQAEGTRFTYKHIGKMVDRKEARENPHWARPILEKLVFERHIWKEDGYYLYPTDEQRARERQKQGRVKSGGA*
Ga0137395_106900082	3300012917	Vadose Zone Soil	MEWEILRILKQAEGTRFTYKNIGKMVDRKESRENPHWARPILEKLVFERHIWKVDGYYIYPTEEERAKERKKQGTVKSGGA*
Ga0137395_107246062	3300012917	Vadose Zone Soil	MEWEVLQVMKQAEGTRFTSKDIGKIVDRKEYRENPHWARPMLEKLLFERHIWKQEGYYLYPTDEERAKERSKQGGVKSGGA*
Ga0137407_104705822	3300012930	Vadose Zone Soil	MEWEILLVMKQAEGTRFTYKHIGKMVDRKESRENPHWAKPLLEKLVFERHIWKQEGYYLYPTDEQRAKERQKQGAVKSGGA*
Ga0134079_100889392	3300014166	Grasslands Soil	MEWEILQIMKQAEGTRFSYKDIGKLVDRKEFRENPHWARPILEKLLFERLIWKVEGYYLYPTEEQRAKERQKQGAKSGGDGNKSV*
Ga0134079_104544571	3300014166	Grasslands Soil	MEWQILQIMKQAEGVRFTYKDIGKIVDRKEFRENPHWARPILERMVFERYIWKDEGYYLYPTEEMKAKERQKLGRANPGGVESRSLEVKN*
Ga0134085_100725422	3300015359	Grasslands Soil	MEWEILLIMKQAEGTRFTYKDIGKIVDRTEFRENPHWARPLLEKLLFERHIWKEEGYYLYPTDEQRAKARQKQGRVKSGGVESQNL*
Ga0134085_104164932	3300015359	Grasslands Soil	MEWEVLLIMKQAVGTRFTHKDIGKIVDRKEFRENPHWARPMLEKLLFERHIWKEDGYYLYPTDEQRAKERQKQGRVKSDCA*
Ga0132258_103821031	3300015371	Arabidopsis Rhizosphere	MEWEILQIMKQAEGILFTSKDIGKIVDRKEFRENPHWARPILERMVFERLIWKQESYYLCPTEEQKARERQKQGRVKVEGQT*
Ga0132258_118862191	3300015371	Arabidopsis Rhizosphere	MEWEILQIMKQAEGPRFTYKDIGKIVDRQEFRENPHWARPILEKLLFERFIWKVEGFYLYPTEEMKAKERQKKSRE*
Ga0132255_1047507961	3300015374	Arabidopsis Rhizosphere	MEWEILVIMKQAEGTLFTSKDIGKIVDRKEFRENPHWARPVLERMAFERLIWKQDSFYLYPTEEQKAKERQKQGRVKVGA*
Ga0134112_101008142	3300017656	Grasslands Soil	FGLVTCPQFRSTVLTIMEWEILQIMKQAEGVRFTYKDIGKIVDRQEYRENPHWARPILEKMVFERLIWKDEGYYLYPTEEQKAKERQKQGRVKSEGVESKNLKATM
Ga0134074_11359742	3300017657	Grasslands Soil	MEWEILVIMKQAEGTRFTYKDIGKIVDRKEFRENPHWARPLLEKLLFERHIWKQEGYYVYPTDEQRAKERNKHGAVKSGGV
Ga0184618_101771432	3300018071	Groundwater Sediment	MEWEILLIMKQAEGTRFTYKHIGKMVDREESRENPHWARPILEKLVFERHIWKQEGYYLYPTDEERAKERKKQGAVKSGGV
Ga0190270_101602972	3300018469	Soil	MEWEILLIMKQAEGTRFTYKHIGKMVDREESRENPHWARPILEKLVGERHIWKQEGYYLYPTDEERAKERKKHGGVKSGGA
Ga0066669_111673261	3300018482	Grasslands Soil	MEWEILLIMKQAEGIRFTSKEIGKIVDRKEFRENPHWARPFLEKMLFERLIWKQDGCYVYPTEEERAKERQKQGRVTSGGV
Ga0066669_120834661	3300018482	Grasslands Soil	WENLLNMKQAEGTRFTYKDIGKIVDRTEFRENPHWARPLLEKLVFERHIWKEEGYYLYPTDEQRAKERQKQGRVKSGGA
Ga0193697_10437311	3300020005	Soil	MEWEILQIMKQTEGTRYTYKDIGKMVDRKEFRENPHWARPLLEKLVFERLIWKVEGYYLYPTEEQRAKERQKQGRVQFVSAAN
Ga0193719_101201102	3300021344	Soil	MEWEILLVMKQAEGTRFTYKHIGKMVDREESRENPHWARPILEKLVGERHIWKVEGYYLYPTDEERAKERKKQGAVKSGGA
Ga0207684_103891542	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MILKQAEGTRFTYKNIGKMVDRKESRENPHWARPILEKLVFERHIWKVEGYYVYPTDEERAVERKKQGAVKSGGA
Ga0207646_111533381	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MEWEILLILKQAEGTRFTYKNIGKMVDRKESRENPHWARPILEKLVFERHIWKEDGYYVYPTDEQRAKERQKQGRVKSDGA
Ga0207670_100027423	3300025936	Switchgrass Rhizosphere	MKQAEGTLFTSKDIGKIVDRKEFRENPHWARPILEKMVFERLIWKAESYYLCPTEEQKARERQKQGRVKVGAEA
Ga0207670_110700091	3300025936	Switchgrass Rhizosphere	MEWEILVIMKQAEGILFTSKDIGKIVDRKEFRENPHWARPILEKMVFERLIWKAESYYLYPTEEQKAKERQKQGRVKVGSEGQ
Ga0209470_13447732	3300026324	Soil	MEWEILQIMKQAEGTRFTYKDIGKIVDRKEFRENAHWARPILEKMVFERLIWKVEGYYLYPTEEQKAKER
Ga0209266_12458411	3300026327	Soil	TFMEWEILLIMKQAEGTRFTHKDIGKIVDRKEFRENPHWARPMLEKLLFERHIWKEDGYYLYPTDEQRAKERQKQGRVKSDGA
Ga0209056_102289431	3300026538	Soil	MEWEILQIMKQAEGVRFTYKDIGKIVDRQEYRENPHWARPILEKMVFERLIWKVEGYYLYPTEEQKAKERQKQGRE
Ga0209056_104134381	3300026538	Soil	YMEWEILQILKQAEGTRFTYKDIGKIVDRKEFRENPHWARPHLERMVFERFIWKDEGYYLYPTEEMKAKERQKQGRVRSEGVECRSLEANR
Ga0209056_106098471	3300026538	Soil	MEWEILQIMKQAEGVRFTYKDIGKIVDRKEFRENPHWARPVLERMVFERLIWKDEGYYLYPTEEQKAKERQKQGRVKSGGVESKNLEATM
Ga0209376_13623731	3300026540	Soil	MKQAEGVRFTYKDIGKIVDRKEFRENPHWARPLLEKLVFERHIWKEEGYYLYPTDEQRAKERQK
Ga0209161_103510222	3300026548	Soil	MEWEILLIMKQAEGTRFTYKDIGKIVDRTEFRENPHWARPLLEKLVFERHIWKEEGYYLYPTDEQRAKARQKQGRVKSGGVESQNL
Ga0209689_13719071	3300027748	Soil	MELEILQVMKQAAGTRFSYKEIGKLVDREAYRENAHWARPILEKLVFERHIWKDDAFYLYPTEDQKSEHR
Ga0209811_102415311	3300027821	Surface Soil	MEWEILQIMKQAEGTRFSYKDIGKLVDRKEFRENPHWARPILEKMLFERLIWKVEGYYLYPTEEQRAKERQKQGAKSGGDGNKSV
Ga0209488_106168292	3300027903	Vadose Zone Soil	MEWEILLILKQAEGTRFTYKNIGKMVDRKESRENPHWARPILEKLVFERHIWKVDGYYIYPTDEERAKERKKQGAVKSGGA
Ga0308178_11360251	3300030990	Soil	LAAFPQSRLTVLTIMEWEILLILKQAEGTRFTYKNIGKMVDRKESRENPHWARPILEKLVFERHIWKVDGYYVYPTEEERAVERKKQGAVKSGGA
Ga0308181_10770931	3300031099	Soil	MEWEILMIMKQAEGTLFTSKDIGKIVDRKEFRENPHWARPVLEKMAFERLIWKQDAFYLYPTEEQKARERQKQGRATVGV
Ga0308181_11806561	3300031099	Soil	MKQAEGTRFTYKHIGKMVDREESRENPHWARPVLEKLVGERHIWKEEGYYVYPTDEQRAKERKKQGAVKSGGA
Ga0308179_10387671	3300031424	Soil	MEWEILLVMKQAEGTRFTYKHIGKMVDRDESRENPHWARPILEKLVGERHIWKEEGYYLYPTDEQRAKERAKQGRVRSGGA
Ga0307471_1020182022	3300032180	Hardwood Forest Soil	MEWEILQVMKQAEGTRFTYKDIGRMVDRKEFRENPQWARPLLEKLVFERHIWKQDGYYIYPTEEERAKERKKQGAVKSGGA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F058880

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences