Metagenome / Metatranscriptome Family F058375

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F058375
Family Type	Metagenome / Metatranscriptome
Number of Sequences	135
Average Sequence Length	108 residues
Representative Sequence	MMVERYRNHLIFVKADQDPATALWKAATHIQFNEDPRTFRDVWLPRPNVGLRTKKSAEKQMMKEARKWVDDRLREGNQEAAKTPSPSPSLLASEQNAPAQSHAEDEQAP
Number of Associated Samples	111
Number of Associated Scaffolds	135

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	78.36 %
% of genes near scaffold ends (potentially truncated)	33.33 %
% of genes from short scaffolds (< 2000 bps)	73.33 %
Associated GOLD sequencing projects	99
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (87.407 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil (14.074 % of family members)
Environment Ontology (ENVO)	Unclassified (28.148 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (37.778 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 26.61% β-sheet: 9.17% Coil/Unstructured: 64.22%
Feature Viewer

Powered by Feature Viewer

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 135 Family Scaffolds
PF12728	HTH_17	31.11
PF00293	NUDIX	20.74
PF14373	Imm_superinfect	9.63
PF13511	DUF4124	4.44
PF01066	CDP-OH_P_transf	2.96
PF01464	SLT	2.96
PF01977	UbiD	0.74
PF02738	MoCoBD_1	0.74
PF03992	ABM	0.74
PF13411	MerR_1	0.74
PF01546	Peptidase_M20	0.74

COG ID	Name	Functional Category	% Frequency in 135 Family Scaffolds
COG0558	Phosphatidylglycerophosphate synthase	Lipid transport and metabolism [I]	2.96
COG1183	Phosphatidylserine synthase	Lipid transport and metabolism [I]	2.96
COG5050	sn-1,2-diacylglycerol ethanolamine- and cholinephosphotranferases	Lipid transport and metabolism [I]	2.96
COG0043	3-polyprenyl-4-hydroxybenzoate decarboxylase	Coenzyme transport and metabolism [H]	0.74

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	87.41 %
Unclassified	root	N/A	12.59 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	87.41 %
Unclassified	root	N/A	12.59 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	87.41 %
Unclassified	root	N/A	12.59 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	50.37 %
Unclassified	root	N/A	12.59 %

Name	Rank	Taxonomy	Distribution
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	40.00 %
Unclassified	root	N/A	12.59 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.74 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	40.00 %
Unclassified	root	N/A	12.59 %
Chromatiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales	0.74 %

Name	Rank	Taxonomy	Distribution
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	40.00 %
Unclassified	root	N/A	12.59 %
Ectothiorhodospiraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Ectothiorhodospiraceae	0.74 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	40.00 %
Unclassified	root	N/A	12.59 %
Thioalkalivibrio	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Ectothiorhodospiraceae → Thioalkalivibrio	0.74 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	40.00 %
Unclassified	root	N/A	12.59 %
Thioalkalivibrio thiocyanoxidans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Ectothiorhodospiraceae → Thioalkalivibrio → Thioalkalivibrio thiocyanoxidans	0.74 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2124908045\|KansclcFeb2_ConsensusfromContig1187386	All Organisms → cellular organisms → Bacteria → Proteobacteria	1349	Open in IMG/M
2162886006\|SwRhRL3b_contig_219229	All Organisms → cellular organisms → Bacteria	834	Open in IMG/M
2228664022\|INPgaii200_c1002788	All Organisms → cellular organisms → Bacteria → Proteobacteria	3396	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10100947	All Organisms → cellular organisms → Bacteria	711	Open in IMG/M
3300000793\|AF_2010_repII_A001DRAFT_10033720	All Organisms → cellular organisms → Bacteria	1193	Open in IMG/M
3300000793\|AF_2010_repII_A001DRAFT_10046144	All Organisms → cellular organisms → Bacteria	983	Open in IMG/M
3300000793\|AF_2010_repII_A001DRAFT_10126155	Not Available	534	Open in IMG/M
3300000837\|AP72_2010_repI_A100DRAFT_1014383	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1114	Open in IMG/M
3300001431\|F14TB_100909589	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	624	Open in IMG/M
3300003911\|JGI25405J52794_10011751	All Organisms → cellular organisms → Bacteria	1678	Open in IMG/M
3300004281\|Ga0066397_10001963	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1880	Open in IMG/M
3300005105\|Ga0066812_1023166	Not Available	523	Open in IMG/M
3300005174\|Ga0066680_10394822	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	879	Open in IMG/M
3300005289\|Ga0065704_10145314	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1477	Open in IMG/M
3300005294\|Ga0065705_10046980	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1420	Open in IMG/M
3300005294\|Ga0065705_10416703	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	863	Open in IMG/M
3300005332\|Ga0066388_100029077	All Organisms → cellular organisms → Bacteria	5131	Open in IMG/M
3300005332\|Ga0066388_100183424	All Organisms → cellular organisms → Bacteria → Proteobacteria	2703	Open in IMG/M
3300005332\|Ga0066388_103210309	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	835	Open in IMG/M
3300005332\|Ga0066388_104509701	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Ectothiorhodospiraceae → Thioalkalivibrio → Thioalkalivibrio thiocyanoxidans	709	Open in IMG/M
3300005445\|Ga0070708_100188295	All Organisms → cellular organisms → Bacteria → Proteobacteria	1930	Open in IMG/M
3300005467\|Ga0070706_101510993	Not Available	614	Open in IMG/M
3300005558\|Ga0066698_10761761	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	631	Open in IMG/M
3300005713\|Ga0066905_100498084	All Organisms → cellular organisms → Bacteria	1012	Open in IMG/M
3300005713\|Ga0066905_101237911	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	669	Open in IMG/M
3300005713\|Ga0066905_101463787	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	620	Open in IMG/M
3300005764\|Ga0066903_101545864	All Organisms → cellular organisms → Bacteria	1255	Open in IMG/M
3300005764\|Ga0066903_104377888	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	754	Open in IMG/M
3300005937\|Ga0081455_10186022	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1569	Open in IMG/M
3300005937\|Ga0081455_10511788	All Organisms → cellular organisms → Bacteria	803	Open in IMG/M
3300006049\|Ga0075417_10184141	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	983	Open in IMG/M
3300006173\|Ga0070716_101239827	Not Available	600	Open in IMG/M
3300006846\|Ga0075430_100077571	All Organisms → cellular organisms → Bacteria → Proteobacteria	2785	Open in IMG/M
3300006852\|Ga0075433_10368400	All Organisms → cellular organisms → Bacteria	1269	Open in IMG/M
3300006904\|Ga0075424_100447961	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1378	Open in IMG/M
3300009094\|Ga0111539_10583765	All Organisms → cellular organisms → Bacteria	1302	Open in IMG/M
3300009100\|Ga0075418_10283267	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1766	Open in IMG/M
3300009137\|Ga0066709_101804275	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	858	Open in IMG/M
3300009147\|Ga0114129_10517539	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1556	Open in IMG/M
3300009157\|Ga0105092_10064089	All Organisms → cellular organisms → Bacteria	1985	Open in IMG/M
3300009162\|Ga0075423_10178156	All Organisms → cellular organisms → Bacteria	2232	Open in IMG/M
3300009168\|Ga0105104_10201118	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1082	Open in IMG/M
3300009610\|Ga0105340_1076677	All Organisms → cellular organisms → Bacteria	1322	Open in IMG/M
3300009792\|Ga0126374_11055311	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	641	Open in IMG/M
3300009800\|Ga0105069_1005656	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	948	Open in IMG/M
3300009801\|Ga0105056_1011580	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	999	Open in IMG/M
3300009807\|Ga0105061_1000808	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	3089	Open in IMG/M
3300009816\|Ga0105076_1003803	All Organisms → cellular organisms → Bacteria	2343	Open in IMG/M
3300009817\|Ga0105062_1001237	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	3039	Open in IMG/M
3300009818\|Ga0105072_1000375	All Organisms → cellular organisms → Bacteria → Proteobacteria	5480	Open in IMG/M
3300010029\|Ga0105074_1000033	All Organisms → cellular organisms → Bacteria	11567	Open in IMG/M
3300010043\|Ga0126380_10468272	All Organisms → cellular organisms → Bacteria	957	Open in IMG/M
3300010043\|Ga0126380_10651646	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	838	Open in IMG/M
3300010046\|Ga0126384_10692918	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	902	Open in IMG/M
3300010047\|Ga0126382_10034750	All Organisms → cellular organisms → Bacteria	2807	Open in IMG/M
3300010047\|Ga0126382_10815049	All Organisms → cellular organisms → Bacteria	798	Open in IMG/M
3300010047\|Ga0126382_10890551	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	769	Open in IMG/M
3300010154\|Ga0127503_10976645	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1090	Open in IMG/M
3300010358\|Ga0126370_10852778	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	818	Open in IMG/M
3300010359\|Ga0126376_10030245	All Organisms → cellular organisms → Bacteria	3651	Open in IMG/M
3300010359\|Ga0126376_10173600	All Organisms → cellular organisms → Bacteria	1755	Open in IMG/M
3300010360\|Ga0126372_10180195	All Organisms → cellular organisms → Bacteria	1733	Open in IMG/M
3300010362\|Ga0126377_10101099	All Organisms → cellular organisms → Bacteria	2630	Open in IMG/M
3300010362\|Ga0126377_10879184	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	958	Open in IMG/M
3300010376\|Ga0126381_100350701	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2040	Open in IMG/M
3300010398\|Ga0126383_10038550	All Organisms → cellular organisms → Bacteria	3875	Open in IMG/M
3300010398\|Ga0126383_11214693	All Organisms → cellular organisms → Bacteria	844	Open in IMG/M
3300012160\|Ga0137349_1063749	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	665	Open in IMG/M
3300012198\|Ga0137364_11459278	Not Available	505	Open in IMG/M
3300012201\|Ga0137365_10111447	All Organisms → cellular organisms → Bacteria	2058	Open in IMG/M
3300012207\|Ga0137381_11522523	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	560	Open in IMG/M
3300012208\|Ga0137376_10154152	All Organisms → cellular organisms → Bacteria	1977	Open in IMG/M
3300012350\|Ga0137372_10020686	All Organisms → cellular organisms → Bacteria → Proteobacteria	6164	Open in IMG/M
3300012353\|Ga0137367_10118487	All Organisms → cellular organisms → Bacteria	1945	Open in IMG/M
3300012469\|Ga0150984_106103551	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	673	Open in IMG/M
3300012532\|Ga0137373_10077108	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2983	Open in IMG/M
3300012685\|Ga0137397_10112867	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1999	Open in IMG/M
3300012922\|Ga0137394_10067112	All Organisms → cellular organisms → Bacteria → Proteobacteria	2983	Open in IMG/M
3300012923\|Ga0137359_10082795	All Organisms → cellular organisms → Bacteria	2818	Open in IMG/M
3300012929\|Ga0137404_10077559	All Organisms → cellular organisms → Bacteria → Proteobacteria	2626	Open in IMG/M
3300012929\|Ga0137404_10085184	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2515	Open in IMG/M
3300012929\|Ga0137404_10226565	All Organisms → cellular organisms → Bacteria	1595	Open in IMG/M
3300012930\|Ga0137407_10313980	All Organisms → cellular organisms → Bacteria	1436	Open in IMG/M
3300012930\|Ga0137407_12224767	Not Available	524	Open in IMG/M
3300012948\|Ga0126375_10869184	Not Available	721	Open in IMG/M
3300012948\|Ga0126375_11186039	Not Available	634	Open in IMG/M
3300012957\|Ga0164303_10122310	All Organisms → cellular organisms → Bacteria	1330	Open in IMG/M
3300015264\|Ga0137403_10045049	All Organisms → cellular organisms → Bacteria	4576	Open in IMG/M
3300015371\|Ga0132258_10496009	All Organisms → cellular organisms → Bacteria → Proteobacteria	3053	Open in IMG/M
3300015373\|Ga0132257_100000575	All Organisms → cellular organisms → Bacteria	28974	Open in IMG/M
3300016294\|Ga0182041_10942604	All Organisms → cellular organisms → Bacteria	778	Open in IMG/M
3300016404\|Ga0182037_10423963	All Organisms → cellular organisms → Bacteria	1101	Open in IMG/M
3300016445\|Ga0182038_11694809	Not Available	569	Open in IMG/M
3300018051\|Ga0184620_10102329	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	884	Open in IMG/M
3300018052\|Ga0184638_1062935	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1355	Open in IMG/M
3300018053\|Ga0184626_10000070	All Organisms → cellular organisms → Bacteria	22285	Open in IMG/M
3300018054\|Ga0184621_10084783	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1106	Open in IMG/M
3300018072\|Ga0184635_10022444	All Organisms → cellular organisms → Bacteria	2324	Open in IMG/M
3300018072\|Ga0184635_10313871	Not Available	611	Open in IMG/M
3300018075\|Ga0184632_10007530	Not Available	4535	Open in IMG/M
3300018081\|Ga0184625_10076118	All Organisms → cellular organisms → Bacteria	1712	Open in IMG/M
3300018084\|Ga0184629_10547667	Not Available	596	Open in IMG/M
3300018433\|Ga0066667_10348749	All Organisms → cellular organisms → Bacteria	1176	Open in IMG/M
3300019886\|Ga0193727_1167932	Not Available	577	Open in IMG/M
3300021344\|Ga0193719_10174507	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	923	Open in IMG/M
3300021560\|Ga0126371_12779434	Not Available	593	Open in IMG/M
3300022534\|Ga0224452_1193790	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	625	Open in IMG/M
3300022694\|Ga0222623_10183020	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	814	Open in IMG/M
3300022756\|Ga0222622_10749206	Not Available	712	Open in IMG/M
3300027006\|Ga0209896_1001993	All Organisms → cellular organisms → Bacteria → Proteobacteria	1890	Open in IMG/M
3300027056\|Ga0209879_1037957	All Organisms → cellular organisms → Bacteria	793	Open in IMG/M
3300027209\|Ga0209875_1001154	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	3612	Open in IMG/M
3300027379\|Ga0209842_1001191	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	5162	Open in IMG/M
3300027561\|Ga0209887_1000483	All Organisms → cellular organisms → Bacteria	12007	Open in IMG/M
3300027646\|Ga0209466_1000601	All Organisms → cellular organisms → Bacteria	7350	Open in IMG/M
3300027722\|Ga0209819_10143013	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	837	Open in IMG/M
3300027873\|Ga0209814_10099884	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1231	Open in IMG/M
3300027880\|Ga0209481_10096321	All Organisms → cellular organisms → Bacteria	1426	Open in IMG/M
3300027907\|Ga0207428_10151471	All Organisms → cellular organisms → Bacteria	1765	Open in IMG/M
3300027952\|Ga0209889_1002866	All Organisms → cellular organisms → Bacteria → Proteobacteria	4896	Open in IMG/M
3300031114\|Ga0308187_10337476	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	577	Open in IMG/M
3300031719\|Ga0306917_11440957	Not Available	531	Open in IMG/M
3300031720\|Ga0307469_10053418	All Organisms → cellular organisms → Bacteria → Proteobacteria	2556	Open in IMG/M
3300031720\|Ga0307469_10664789	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	940	Open in IMG/M
3300031910\|Ga0306923_11237100	All Organisms → cellular organisms → Bacteria	796	Open in IMG/M
3300031912\|Ga0306921_11464693	All Organisms → cellular organisms → Bacteria	748	Open in IMG/M
3300032013\|Ga0310906_10278063	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1058	Open in IMG/M
3300032180\|Ga0307471_101369017	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	869	Open in IMG/M
3300034090\|Ga0326723_0122356	All Organisms → cellular organisms → Bacteria	1134	Open in IMG/M
3300034149\|Ga0364929_0005190	All Organisms → cellular organisms → Bacteria	3385	Open in IMG/M
3300034150\|Ga0364933_167942	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	571	Open in IMG/M
3300034176\|Ga0364931_0196745	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	657	Open in IMG/M
3300034354\|Ga0364943_0045590	All Organisms → cellular organisms → Bacteria	1438	Open in IMG/M
3300034354\|Ga0364943_0265091	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	644	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	86.67%
Host-Associated	Host-Associated	13.33%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	72.59%
Aquatic	Environmental → Aquatic	14.07%
Plants	Host-Associated → Plants	13.33%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	68.15%
Sediment	Environmental → Aquatic → Sediment	10.37%
Rhizosphere	Host-Associated → Plants → Rhizosphere	8.89%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.44%
Freshwater	Environmental → Aquatic → Freshwater	3.70%
Floodplain	Environmental → Terrestrial → Floodplain	3.70%
Peat	Environmental → Terrestrial → Peat	0.74%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	47.41%
Loam	Environmental → Terrestrial → Soil → Loam	11.11%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	10.37%
Sand	Environmental → Terrestrial → Soil → Sand	9.63%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	8.15%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	3.70%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.22%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.22%
Sediment	Environmental → Aquatic → Freshwater → Sediment	2.96%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.74%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.74%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.74%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	31.85%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	10.37%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	10.37%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	9.63%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	8.15%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	8.15%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.44%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	3.70%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.22%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.22%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.22%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	2.96%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.74%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.74%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.74%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.74%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.74%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	14.07%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	11.85%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	9.63%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	8.15%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	8.15%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	6.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.44%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	3.70%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	3.70%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.22%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	2.22%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.22%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.22%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	2.22%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	2.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.96%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	1.48%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.48%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.48%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.74%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.74%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.74%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere	0.74%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.74%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2124908045	Soil microbial communities from Great Prairies - Kansas assembly 1 01_01_2011	Environmental	Open in IMG/M
2162886006	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
2228664022	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000597	Forest soil microbial communities from Amazon forest - 2010 replicate II A1	Environmental	Open in IMG/M
3300000793	Forest soil microbial communities from Amazon forest - 2010 replicate II A001	Environmental	Open in IMG/M
3300000837	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A100	Environmental	Open in IMG/M
3300001431	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemly	Environmental	Open in IMG/M
3300003911	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300004281	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 30 MoBio	Environmental	Open in IMG/M
3300005105	Soil and rhizosphere microbial communities from Laval, Canada - mgHPC	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005289	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2	Host-Associated	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009157	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009168	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015	Environmental	Open in IMG/M
3300009610	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT700	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300009800	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N2_30_40	Environmental	Open in IMG/M
3300009801	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_20_30	Environmental	Open in IMG/M
3300009807	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_0_10	Environmental	Open in IMG/M
3300009816	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_0_10	Environmental	Open in IMG/M
3300009817	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_10_20	Environmental	Open in IMG/M
3300009818	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_30_40	Environmental	Open in IMG/M
3300010029	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_10_20	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010154	Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012160	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT630_2	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300018051	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_b1	Environmental	Open in IMG/M
3300018052	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b2	Environmental	Open in IMG/M
3300018053	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_b1	Environmental	Open in IMG/M
3300018054	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1	Environmental	Open in IMG/M
3300018072	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2	Environmental	Open in IMG/M
3300018075	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b1	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300018084	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_b1	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300019886	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c2	Environmental	Open in IMG/M
3300021344	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022534	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_b1	Environmental	Open in IMG/M
3300022694	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coex	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300027006	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_20_30 (SPAdes)	Environmental	Open in IMG/M
3300027056	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_20_30 (SPAdes)	Environmental	Open in IMG/M
3300027209	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_0_10 (SPAdes)	Environmental	Open in IMG/M
3300027379	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_10_20 (SPAdes)	Environmental	Open in IMG/M
3300027561	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_30_40 (SPAdes)	Environmental	Open in IMG/M
3300027646	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 30 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027722	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015 (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027880	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)	Host-Associated	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027952	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_0_10 (SPAdes)	Environmental	Open in IMG/M
3300031114	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_182 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300034090	Peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF00N	Environmental	Open in IMG/M
3300034149	Sediment microbial communities from East River floodplain, Colorado, United States - 20_j17	Environmental	Open in IMG/M
3300034150	Sediment microbial communities from East River floodplain, Colorado, United States - 25_j17	Environmental	Open in IMG/M
3300034176	Sediment microbial communities from East River floodplain, Colorado, United States - 21_j17	Environmental	Open in IMG/M
3300034354	Sediment microbial communities from East River floodplain, Colorado, United States - 23_s17	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
KansclcFeb2_05015660	2124908045	Soil	IWKQESTLLWNSGKGAKARSMMVERYRNHLIFVKADQDPATALWRAATHIQFNEDPRTFRDVWLPRPTVSLRTKKSAEKQMMKEARKWVDDRLREGNQEGAKTPPPGSSLLASEQNAPAEDEQSHH
SwRhRL3b_0334.00001690	2162886006	Switchgrass Rhizosphere	MMVERYRNHLIFVKADQDPVTTLWKAGTHIQFNEDPRTFRDIWLPRPIIGFRTKRNAEKQRMKEARKWVDDRLREGKTTETSSADPGSVNEPKNALAEPDEGAG
INPgaii200_10027885	2228664022	Soil	MVERYRNHLIFVKADQNPVTALWKAATHIQFNEDPRTFRDVWLPRPNVGLRTKKSAEKQMMKEARKWVDDRLREVNREAAKTPSPGSSLLASEQDAPAQSHAEDEQAP
AF_2010_repII_A1DRAFT_101009472	3300000597	Forest Soil	MVERYRNHLIFVKADQDPATTLWKAGTHIQFNEDPRTFRDVWLPRPTVGFRTKRNAEKQRMKEAKKWVDDRLLEAKTTKTTSPASNLLDSENSLAEPHE
AF_2010_repII_A001DRAFT_100337203	3300000793	Forest Soil	MVERYRNHLIFVKADQDPATTLWKAGTHIQFNEDPRTFRDVWLPRPTVGFRTKRNAEKQRMKEAKKWVDDRLLEAKTTKTTSPASNLLDSENSLAEPHEK
AF_2010_repII_A001DRAFT_100461442	3300000793	Forest Soil	MVERYRNHLIFVKAEQNPVTALWKAGTHIQFNEDPRTFRDVWLPRPTVGFRTKKNAEKQRMKEAKRWVDDRLLEAKTTTKTSLASNPLDSENPLAEH
AF_2010_repII_A001DRAFT_101261551	3300000793	Forest Soil	MVERYRNHLIFVKAEQDPATALWKAGTHIQFNEDPRTFRDVWLPRPTVGFRTKRNAEKQRMKEAKKWVDDRLLEAKTTKTTSLVSSLLDSENPLAEPHEKDDGAPHANSARAE*
AP72_2010_repI_A100DRAFT_10143832	3300000837	Forest Soil	MVERYRNHLIFVKAEQNPVTALWKAGTHIQFNEDPRTFRDVWLPRPTVGFRTKKNAEKQRMKEAKRWXDDRLLEAKTTTKTSLASNPLDSENPLAEHEKDEAAPSANSARAE*
F14TB_1009095891	3300001431	Soil	MVERYRNHLIFVKAEQDPGTALWRAATHIQFNEDPRTFRDVWLPRPTVSLRTKKSAEKQMMKEARKWVDDRLREGNQEAAKTPPPGSSEQNAPAEDEQAS*
JGI25405J52794_100117511	3300003911	Tabebuia Heterophylla Rhizosphere	MVERYRNHLIFVKAEQDPVTALWKAGTHIQFNEDPRTFRDVWLPRPTVGFRTKRNAEKQRMKEAKKWVDDRLLEAKTTKTTSLASSLLNSENSLAEPHEDDKAAPDANSAEAE*
Ga0066397_100019632	3300004281	Tropical Forest Soil	MVERYRNHLIFVKAEQDPVTALWKAGTHIQFNEDPRTFRDVWLPRPTVGFRTKRNAEKQRMKEAKRWVDDRLLEAKTTKKTSLVSNLLDSENPLAEPHEKDEAAPSANSARAE*
Ga0066812_10231661	3300005105	Soil	MVERYRNHLIFVKADQDPATALWKAATHVQFNEDPRTFRDVWLPRPNVGLRTKKSAEKQMMKEARKWVDDRLHEGNQEAAKTPSPGSSVLASEQNAPAQSHAEDEQAP*
Ga0066680_103948221	3300005174	Soil	SMMVERYRNHLIFVKADQDPATAVWKAATHIQFNEDPRTFRDVWLPRPNVGLRTKKSAEKQMMKEARKWVDDRLREGNQEAAKTPSPSPSLLASEQNAPAQSHAEDEQAP*
Ga0065704_101453141	3300005289	Switchgrass Rhizosphere	MMVERYRNHLIFVKADQDPVTTLWKAGTHIQFNEDPRTFRDIWLPRPIIGFRTKRNAEKQRMKEARKWVDDRLREGKTTETSSADPGSVNEPKNALAEPDEGAG*
Ga0065705_100469804	3300005294	Switchgrass Rhizosphere	MVERYRNHLIFVKADQDPVTTLWKAGTHIQFNEDPRTFRDIWLPRPIIGFRTKRNAEKQRMKEARKWVDDRLREGKTTETSSADPGSVNEPKNALAEPDEGAG*
Ga0065705_104167031	3300005294	Switchgrass Rhizosphere	MVERYRNHLIFVKADQDPATALWRAATHIQFNEDPRTFRDVWLPRPNVSLRTKKSAEKQMMKEARKWVDDRLREGNQEAAKTPSPGSSLLASENAPAQSQAKDEQAS*
Ga0066388_1000290777	3300005332	Tropical Forest Soil	MVERYRNHLIFVKADQDPATALWKAGTHIQFNEDTRTFRDIWLPRPTVGFRTKRNAEKQRMKEAKKWVDERLREGRTIETSSGGLDPLPSESKNALSEPHEKDEPAQFPNPTETE*
Ga0066388_1001834243	3300005332	Tropical Forest Soil	MMVERYRNHLIFVKADQDPATALWKAGTHIQFNEDTRTFRDIWLPRPTVGFRTKRNAEKQRMKEAKRWVDERLREGKIIETSSGGLDPLASESKNELAEPHEKDKPNQSPNSAEAE*
Ga0066388_1032103091	3300005332	Tropical Forest Soil	ETQARKKMVERYRNHLIFVKAEQDPVTALWKAGTHIQFNEDPRTFRDVWLPRPTVGFRTKRNAEKQRMKEAKRWVDDRLLEAKTTKKTSLVSNLLDSENPLAEPHEKDEAAPSANSARAE
Ga0066388_1045097011	3300005332	Tropical Forest Soil	MVERYRNHLIFVKADQDPATTLWKAGTHIQFNEDPRTFRDVWLPRPNIGSKTKKNAEKQMMKEAKKWVDERLRGESQDTIKASSLSSDLLADQQINAPTQSKEENEQASYPNVPRPD*
Ga0070708_1001882953	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MLVERYRNHLIFVKADQDPRTALWKAGTHIQFNEDPRTFRDVWLPRPPVGSKTKRNAERQMMKEARKWVDDRLSEGNQPTAKTFSLDSRLLTSEQTTPDNSQDEQDPSPRES*
Ga0070706_1015109931	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MVERYRNHLIFVKADQNPVTALWKAATHIQFNEDPRTFRDVWLPRPNVGLRTKKSAEKQMMKEARKWVDDRLREGNQEGAKTPPPGSSLLASEQN
Ga0066698_107617612	3300005558	Soil	CYETVGKGANHYRQARSMMVERYRNHLIFVKADQDPATAVWKGATHIQFNEDPRTFRDVWLPRPNVGLRTKKSAEKQMMKEARKWVDDRLREGNQEAAKTPSPSPSLLASEQNAPAQSQAKDEQAS*
Ga0066905_1004980841	3300005713	Tropical Forest Soil	MVERYRNHLIFVKADQDPATTLWKAGTHIQFNEDPRTFRDVWLPRPTVGFRTKKNAEKQRMKEAKKWVDDRLLEGKTAKTTSLASSLLDSENSVAKPHEKDKAAPDANSAGAE*
Ga0066905_1012379112	3300005713	Tropical Forest Soil	MMVERYRNHLIFVKADQDPATALWKAGTHIQFNEDTRTFRDIWLPRPTVGFRTKRNAEKQRMKEAKKWVDERLREGKIIETSSGGLDPLAGESKNALAEPHEKNKPAQSPNPAEAE*
Ga0066905_1014637871	3300005713	Tropical Forest Soil	ALWKAGTHIQFNEDPRTFRDVWLPRPTVGFRTKRNAEKQRMKEAKRWVDDRLLEAKTTKKTSLVSNLLDSENPLAEPHEKDEAAPSANSARAE*
Ga0066903_1015458642	3300005764	Tropical Forest Soil	MVERYRNHLIFVKADQDPATTLWKAGTHIQFNEDPRTFRDVWLPRPTVGFRTKRNAEKQRMKEAKKWVDDRLLEAKTTKTTSPASNLLDSENSLAEPHEKDKAAPDANSARAE*
Ga0066903_1043778881	3300005764	Tropical Forest Soil	QDPVTALWKAGTHIQFNEDPRTFRDVWLPRPTVGFRTKRNAEKQRMKEAKKWVDDRLLEGKTTKKPSLASNLLDSENPLAEPHEKNEAAPHANSARAE*
Ga0081455_101860221	3300005937	Tabebuia Heterophylla Rhizosphere	MVERYRNHLIFVKADQDPVTTLWKAGTHIQFNEDPRTFRDIWLPRPTIGFRTKRNAEKQRMKEARKWVDDRLREGKTTETSSLDPGSLVNEPKNALAEPDEGAG*
Ga0081455_105117881	3300005937	Tabebuia Heterophylla Rhizosphere	MVERYRNHLIFVKAEQDPATALWKAGTHIQFNEDPRTFRDVWLPRPTVGFRTKRNAEKQRMKEAKKWVDDRLLEAKTTKTTSLASTLLDSENPLAKPHEK
Ga0075417_101841413	3300006049	Populus Rhizosphere	GKGAKARSMMVERYRNHLIFVKADQDPATALWRAATHIQFNEDPRTFRDVWLPRPTVSLRTKKSAEKQMMKEARKWVDDRLREGNQEGAKTPPPGSSLLASEQNAPAEDEQSHH*
Ga0070716_1012398271	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MLVERYRNHLIFVKADQDPRTALWKAGTHIQFNEDPRTFRDVWLPRPPVGSKTKRNAERQMMKEARKWVDDRLSEGNQPTAKTFSLDSRLLTSEQTTPDNSQDEQDPSP
Ga0075430_1000775714	3300006846	Populus Rhizosphere	MVERYRNHLIFVKADQDPATALWRAATHIQFNEDPRTFRDVWLPRPTVSLRTKKSAEKQMMKEARKWVDDRLREGNQEGAKTPPPGSSLLASEQNAPAEDEQSHH*
Ga0075433_103684004	3300006852	Populus Rhizosphere	MVERYRNHLIFVKADQNPVTALWKAATHIQFNENPRTFRDVWLPRPNVGLRTKKSAEKQMMKEARKWVDDRLREVNREAAKTPSPGSSLLASEQDAPAQSHAEDEQAR*
Ga0075424_1004479615	3300006904	Populus Rhizosphere	YAGGELIVMVERYRNHLIFVKADQNPVTALWKAATHIQFNEDPRTFRDVWLPRPNVGLRTKKSAEKQMMKEARKWVDDRLREVNREAAKTPSPGSSLLASEQDAPAQSHAEDEQAR*
Ga0111539_105837652	3300009094	Populus Rhizosphere	MMVERYRNHLIFVKADQDPATALWRAATHIQFNEDPRTFRDVWLPRPTVSLRTKKSAEKQMMKEARKWVDDRLREGNQEGAKTPPPGSSLLASEQNAPAEDEQSHH*
Ga0075418_102832672	3300009100	Populus Rhizosphere	MMVERYRNHLIFVKADQDPVTTLWKAGTHIQFNEDTRTFRDIWLPRPIIGFRTKRNAEKQRMKEARKWVDDRLREGKTTETSSADPGSVNEPKNALAEPDEGAG*
Ga0066709_1018042751	3300009137	Grasslands Soil	DPRTFRDVWLPRPNVGLRTKKSAEKQMMKEARKWVDDRLREGNQEAAKTPSPSPSLLASEQNAPAQSHAEDEQAP*
Ga0114129_105175391	3300009147	Populus Rhizosphere	ERYRNHLIFVKADQNPVTALWKAATHIQFNEDPRTFRDVWLPRPNVGLRTKKSAEKQMMKEARKWVDDRLREVNREAAKTPSPGSSLLASEQDAPAQSHAEDEQAR*
Ga0105092_100224653	3300009157	Freshwater Sediment	MVERYRNHLIFVKADQDPTTALWKASSHVQFNDGPLAFRDVWLPKPTVGFKTRRNAEKQMLKEARKWIDDRLLSGNPTAKIVSLGSGLLDDDGSG*
Ga0105092_100640894	3300009157	Freshwater Sediment	MMVERYRNHLIFVKADQDPVTTLWKAGTHIQFNEDPRTFRDIWLPRPTIGFRTKRNAEKQRMKEARKWVDDRLREGKTTEISSADPGSLVNEQKNALAEPDEGAG*
Ga0075423_101781562	3300009162	Populus Rhizosphere	MMVERYRNHLIFVKADQNPVTALWKAATHIQFNEDPRTFRDVWLPRPNVGLRTKKSAEKQMMKEARKWVDDRLREVNREAAKTPSPGSSLLASEQDAPAQSHAEDEQAR*
Ga0105104_102011181	3300009168	Freshwater Sediment	MMVERYRNHLLFVKADQDPVTTLWKAGTHIQFNEDPRTFRDIWLPRPTIGFRTKRNAEKQRMKEARKWVDDRLREGKTTETSSADPGSLVNEQKNALAEPDEGAG*
Ga0105340_10766772	3300009610	Soil	MMVERYRNHLIFVKADQDPATALWKTATHVQFNEDPRTFRDVWLPRPNVGLRTKKSAEKQMIREARKWVDDRLREVNQETAKTPSPGSSLLASEQDAPAQSHAKDEQAP*
Ga0126374_110553111	3300009792	Tropical Forest Soil	EQDSVTALWKAGAHIQFNEDPRTFRDVWLPPPTVGIRPKRNAEKQRMKEAKKWVDERLREGRTIETSSGGLDPLPSESKNALSEPHEKDEPAQFPNPTETE*
Ga0105069_10056561	3300009800	Groundwater Sand	MMVERYRNHLIFVKADQDPATALWKAATHIQFNEDPRTFRDVWLPRPHVGLRTKKSAEKQMVKEARKWVDDRLREGNQEAAKTPSPGSNPLASEQNSPAHSHAEDEQTP*
Ga0105056_10115803	3300009801	Groundwater Sand	LKKKRGGLYVAAQARTYAGGELIVMVERYRNHLIFVKADQDLATALWKAATHIQFNEDPRTFRDVWLPRPHVGLRTKKSAEKQMVKEARKWVDDRLREGNQEAAKTLSPGSNLLASEQNSPAHSHAEDEQTP*
Ga0105061_10008085	3300009807	Groundwater Sand	KADQDPATALWKAATHIQFNEDPRTFRDVWLPRPHVGLRTKKSAEKQMMKEARKWVDDRLREGNQEAAKTPSPGSNLLASEQNSPAHSHAHAEDEQTP*
Ga0105076_10038032	3300009816	Groundwater Sand	MMVERYRNHLIFVKADQDPATALWKAATHIQFNEDPRTFRDVWLPRPHVGLRTKKSAEKQMVKEARKWVDDRLREGNQEAAKTPSPGSNLLASEQNSPAHSHAHAEDEQTP*
Ga0105062_10012371	3300009817	Groundwater Sand	QDPATALWKAATHIQFNEDPRTFRDVWLPRPHVGLRTKKSAEKQMVKEARKWVDDRLREGNQEAAKTPSPGSNPLASEQNSPAHSHAEDEQTP*
Ga0105072_10003752	3300009818	Groundwater Sand	MMVERYRNHLIFVKADQDPATALWKAATHIQFNEDPRTFRDVWLPRPHVGLRTKKSAEKQMVKEARKWVDDRLREGNQEAAKTPSPGSNLLASEQNSPAHSHAEDEQTP*
Ga0105074_10000337	3300010029	Groundwater Sand	MMVERYRNHLIFVKADQDPATALWKAATHIQFNEDPRTFRDVWLPRPHVGLRTKKSAEKQMVKEARKWVDDRLREGNQEAAKTLSPGSNLLASEQNSPAHSHAEDEQTP*
Ga0126380_104682722	3300010043	Tropical Forest Soil	MVERYRNHLIFVKAEQDPVTALWKAGTHIQFNEDPRTFRDVWLPRPTVGFRTKRNAEKQRMKEAKRWVDDRLLEAKTTKKTSLASNLLDSENPLAEPHEKDEAAPSANSARAE*
Ga0126380_106516461	3300010043	Tropical Forest Soil	MMVERYRNHLIFVKADQDPATALWKAGTHIQFNEDTRTFRDIWLPRPTVGFRTKRNAEKQRMKEAKKWVDERLREGRTIETSSGGLDPLPSESKNALSEPHEKDEPAQFPNPTETE*
Ga0126384_106929181	3300010046	Tropical Forest Soil	GTRIMVERYRNHLIFVKADQDPATALWKAGTHIQFNEDTRTFRDIWLPRPTVGFRTKRNAEKQRMKEAKKWVDERLREGRTIETSSGGLDPLPSESKNALSEPHEKDEPAQFPNPTETE*
Ga0126382_100347503	3300010047	Tropical Forest Soil	MVERYRNHLIFVKAEQDPVTALWKAGTHIQFNEDPRTFRDVWLPRPTVGFRTKRNAEKQRMKEAKRWVDDRLLEAKTTKKTSLVSNLLDSENPLAEPHEKEEAAPSANSARAE*
Ga0126382_108150492	3300010047	Tropical Forest Soil	MVERYRNHLIFVKADQDPATALWKAGTHIQFNEDPRTFRDVWLPRPTVVFRTKRNAEKQRMKEAKKWVDDRLLEGKTTKTTSLTSSLLDTENSLAEPHKKDEAAPQANSARAE*
Ga0126382_108905513	3300010047	Tropical Forest Soil	MVERYRNHLIFVKADQDPATALWKAGAHIQFNEDTRTFRDIWLARPTVGFRTKRNAEKQRMKEAKKWVDERLREGKIIERSSGGLDPLAGESKNALAEPHEKNKPTQSPNPAEAE*
Ga0127503_109766451	3300010154	Soil	MLVERYRNHLIFVKADQDAGTALWKAGTHIQFNEDPRTFRDVWLPRPAVGSKTKRSAERQMIKEARKWVDDRLSEANQATVKPFSSDSRPLTSEQTAPCNSQEEQESSPREN*
Ga0126370_108527782	3300010358	Tropical Forest Soil	MVERYRNHLIFVKADQDPATTLWKAGTHIQFNEDPRTFRDVWLPRPTVGFRTKRNAEKQRMKEAKKWVDDRLLEAKTTKTTSPASNLLDSENSLAEPHEKDKAAPDANSAGTE*
Ga0126376_100302454	3300010359	Tropical Forest Soil	MVERYRNHLIFVKAEQDPVAALWKAGTHIQFNEDPRTFRDVWLPRPTVGFRTKRNAEKQRMKEAKRWVDDRLLEAKTTKKTSLVSNLLDSENPLAEPHEKDEAAPSANSARAE*
Ga0126376_101736001	3300010359	Tropical Forest Soil	MVERYRNHLIFVKADQDPATALWKAGTHIQFNEDTRTFRDIWLPRPTVGFRTKRNAEKQRMKEAKKWVDERLREGRTMETSSGGHDPLPSESKNALSEPHEKDEPAQFPNPTETE*
Ga0126372_101801953	3300010360	Tropical Forest Soil	MVERYRNHLIFVKADQDPATTLWKAGTHIQFNEDPRTFRDVWLPRPTVGFRTKRNAEKQRMKEAKKWVDDRLVEAKTTKTTSPASNLLDSENSLAEPHEKDKAAPDANSARAE*
Ga0126377_101010995	3300010362	Tropical Forest Soil	MVERYRNHLIFVKADQDPATTLWKAGTHIQFNEDPRTFRDVWLPRPTVGFRTKRNAEKQRMKEAKKWVDDRLLEAKTTKTTSPASNLLDSENSLTEPHEKDKAAPDANSARAE*
Ga0126377_108791841	3300010362	Tropical Forest Soil	TALWKAGAHIQFNEDTRTFRDIWLARPTVGFRTKRNAEKQRMKEAKKWVDERLREGKTIERLPGDLDPLASESKNALAEPHEKDEPAQSPNSAEAE*
Ga0126381_1003507012	3300010376	Tropical Forest Soil	MVERYRNHLIFVKAEQDPVTALWKAGTHIQFNEDPRTFRDVWLPRPTVGFRTKRTAEKQRMKEAKRWVDDRLLEAKTTKKTSLASNLLDSENPLAEPHEKDEAAPSANSARAE*
Ga0126383_100385505	3300010398	Tropical Forest Soil	MVERYRNHLIFVKADQDPATTLWKAGTHIQFNEDPRTFRDVWLPRPTVGFRTKRNAEKQRMKEAKKWVDDRLLEAKTTKTTSPASNLLDSENSLAKPHEKDKAAPDANSARAE*
Ga0126383_112146932	3300010398	Tropical Forest Soil	MKKMVERYRNHLIFVKAEQDPVTALWKAGTHIQFNEDPRTFRDVWLPRPTVGFRTKRTAEKQRMKEAKRWVDDRLLEAKTTKKTSLASNLLDSENPLAEPHEKDEAAPSANSARAE*
Ga0137349_10637492	3300012160	Soil	MMVERYRNHLIFVKADQDPATALWKTATHVQFNEDPRTFRDVWLPRPNVGLRTKKSAEKQMMREARKWVDDRLREVNQETAKTPSPGSSLLASEQDAPAQSHAKDEQAP*
Ga0137364_114592781	3300012198	Vadose Zone Soil	VPGNKNPGCYEKVGKGANHYRQARSMMVERYRNHLIFVKADQDPATAVWKAATHIQFNEDPRTFRDVWLPRPNVGLRTKKSAEKQMMKEARKWVDDRLREGNQEAAKTPSPSPSLLAS
Ga0137365_101114473	3300012201	Vadose Zone Soil	MMVERYRNHLIFVKADQDPATALWRAATHIQFNEDPRTFRDVWLPRPNVSLRTKKSAEKQMMKEARKWVDDRLREGNQEAAKTPSPGSSLLASEQNAPAQSQAKDEQAS*
Ga0137381_115225231	3300012207	Vadose Zone Soil	NEDPRTFRDVWLPRSNVSLRTKKSAEKQMMKEARKWVDDRLREGNQEAAKTPSPGSSLLASEQNAPAQSQAKDEQAS*
Ga0137376_101541523	3300012208	Vadose Zone Soil	MMVERYRNHLIFVKADQDPATAVWKAATHIQFNEDPRTFRDVWLPRPNVGLRTKKSAEKQMMKEARKWVDDRLREGNQEAAKTPSPSPSLLASEQNAPAQSHAEDEQAP*
Ga0137372_100206863	3300012350	Vadose Zone Soil	MMVERYRNHLIFVKADQDPATALWRTATHIQFNEDPRTYRDVWLPRPNVSLRTKKSAEKQMMKEARKWVDDRLREGNQEAAKTPSPGSSLLASEQNAPAQSQAKDEQAS*
Ga0137367_101184873	3300012353	Vadose Zone Soil	MMVERYRNHLIFVKADQDPATALWRTATHIQFNEDPRTFRDVWLPRPNVSLRTKKSAEKQMMKEARKWVDDRLREGNQEAAKTPSPGSSLLASEQNAPAQSQAKDEQAS*
Ga0150984_1061035512	3300012469	Avena Fatua Rhizosphere	FHLSIPLETVPGNKNPGCYEKVGKGANHYRQARSMMVERNRNHLIFVKADQDPATAVWKAATHIQFNEDPRTFRDVWLPRPNVGLRTKKSAEKQMMKEARKWVDDRLREGNQEAAKTPSPSPSLLASEQNAPAQSHAEDEQAP*
Ga0137373_100771085	3300012532	Vadose Zone Soil	MMVERYRNHLIFVKADQDPATALWRTATHIQFNEDPRTFRDVWLPRPNVSLRTKKSAEKQMMKEARKWVDDRLREGIQEAAKTPSPGSSLLASEQNAPAQSQAKDEQAS*
Ga0137397_101128674	3300012685	Vadose Zone Soil	MMVERYRNHLIFVKADQDPATALWKAATHIQFNEDPRTFRDVWLPRPNVGLRTKKSAEKQMMKEARKWVDDRLREGNQEAAKTPSSGSSLSASEQNTPAQSHAEDDKGRTLVPPDRINYH
Ga0137394_100671124	3300012922	Vadose Zone Soil	MMVERYRNHLIFVKADQDSGTALWKAATHIQFNEDPRTFRDVWLPRPNVGLRTKKIAEKQMMKEARKWVDDRLREVNREAAKTPSPGSSLLASEQDAPAQSHAEDEQAP*
Ga0137359_100827953	3300012923	Vadose Zone Soil	MLVERYRNHLIFVKADQDPRTALWKAGTHIQFNEDPRTFRDVWLPRPPVGSKTKRNAERQMMKEARKWVDDRLSEGNQPTAKTFSLDSRLLTSEQTTPDNSQDEQEPSPRES*
Ga0137404_100775592	3300012929	Vadose Zone Soil	MMVERYRNHLIFVKADQDPATAVWKGATHIQFNEDPRTFRDVWLPRPNVGLRTKKSAEKQMMKEARKWVDDRLREGNQEAAKTPSPSPSLLASEQNAPAQSHAEDEQAP*
Ga0137404_100851846	3300012929	Vadose Zone Soil	MMVERYRNHLIFVKADQDPATALWKAATHIQFNEDPRTFRDVWLPRPNVGLRTKKSAEKEMMKEARKWVDDRLREGNQEAAKTPSSGSSLSASEQNTPAQSHAEGTLVPPDRINYH*
Ga0137404_102265652	3300012929	Vadose Zone Soil	MMVERYRNHLIFVKADQDSVTALWKAATHIQFNEDPRTFRDVWLPRPNVGLRTKKIAEKQMMKEARKWVDDRLREVNREAAKTPSPGSSLLASEQDAPAQSHAEDEQAP*
Ga0137407_103139803	3300012930	Vadose Zone Soil	MMVERYRNHLIFVKADQDSVTALWKAATHIQFNEDPRTFRDVWLPRPNVGLRTKKIAEKQMMKEARKWVDDRLREVNREAAKTPSPGSSLLASEQDTPARSHAEDEQAP*
Ga0137407_122247672	3300012930	Vadose Zone Soil	GKGANHYRQARSMMVERYRNHLIFVKADQDPATAVWKGATHIQFNEDPRTFRDVWLPRPNVGLRTKKSAEKQMMKEARKWVDDRLREGNQEAAKTPSPSPSLLASEQNAPAQSHAEDEQAP*
Ga0126375_108691842	3300012948	Tropical Forest Soil	MVERYRNHLIFVKAEQDPATALWKAGTHIQFNEDPRTFRDVWLPRPTVDFRTKRNAEKQRMKEAKKWVDDRLLEAKTTKTTSLVSTLLDSENPLAEPHEKDDAAPHANSARVE*
Ga0126375_111860392	3300012948	Tropical Forest Soil	MVERYRNHLIFVKAEQDPVTALWKAGTHIQFNEDPRTFRDVWLPRPTVGFRTKRNAEKQRMKEAKRWVDDRLLEAKTTKKTSLVSNLLDSENPLAEPHEK
Ga0164303_101223102	3300012957	Soil	MLVERYRNHLIFVKADQDPRAALWKAGTHIQVNEDPRTFRDVWLPRPPVASKTKRNAERQMMKEARKWVDDRLSEGNQPTAKTFSLDSRLLTSEQTTPDNSQDEQDPSPRES*
Ga0137403_100450498	3300015264	Vadose Zone Soil	MMVERYRNHLIFVKADQDPATALWKAATHIQFNEDPRTFRDVWLPRPNVGLRTKKSAEKQMMKEARKWVDDRLREGNQEAAKTPSPSPSLLASEQNAPAQSHAEDEQAP*
Ga0132258_104960092	3300015371	Arabidopsis Rhizosphere	MMVERYLNHLIFVKADQDPATGLWKAGTHVQFNEDTRTFRDVWLPRPNVGLRTRRSAEKQMMKEAKKWVDDRLREGNQQAAKAPSPRSNLLANEPNAPAHSHSEDKQVP*
Ga0132257_10000057526	3300015373	Arabidopsis Rhizosphere	MMVERYLNHLIFVKADQDPATGLWKAGTHVQFNEDTRTFRDVWLPRPNVGLRTRRSAEKQMMKEAKKWVDDRLREGNQQAAKAPSPRSNLLANEPNAPAHSHSEDEQVP*
Ga0182041_109426042	3300016294	Soil	MLVERYRNHLIFVKADRDPGTGLWKAGTHVQFNEDPRTFRDVWLPRPAVGSKTIRSTERQAMKEAKRWVDDRLREGNQATANLAGSRLLTSDQ
Ga0182037_104239631	3300016404	Soil	MLVERYRNHLIFVKADSDPGTGLWKAGTHVQFNEDPRTFRDVWLPRPAVGSKTIRSTERQAMKEAKRWVDDRLREGNQATANSVGSRLLTSDQTATGNSQEEQ
Ga0182038_116948091	3300016445	Soil	MLVERYRNHLIFVKADRDPGTGLWKAGTHVQFNEDPRTFRDVWLPRPAVGSKTIRSTERQAMKEAKRWVDDRLREGNQATANLAGSRLLTSDQTATGNSQEEQ
Ga0184620_101023292	3300018051	Groundwater Sediment	MVERYRNHLIFVKADQDPATALWKAVTHIQFNEDPRTFRDVWLPRPNVGLRTKKSAEKQMMKEAKKWVDDRLHEEAAKTPSPGSSVLASEQNAPAQSHAEDEQAP
Ga0184638_10629354	3300018052	Groundwater Sediment	QFNEDPRTFRDVWLPRPNVGLRTKKSAEKQMMKEARKWVDDRLREGNQEVAKTPSPGSSLLASEQDAPAQSHAEDEQAP
Ga0184626_1000007023	3300018053	Groundwater Sediment	MVDRYRNHLIFVKADQDPATALWKAATHIQFNEDPRTFRDVWLPRPNVGLRTKKSAEKQMMKEARKWVDDRLREGNQEAAKTPLPGSGLLASEQNAPAQSHAEDEQAP
Ga0184621_100847831	3300018054	Groundwater Sediment	NSRCYEEIVGKGVKARSMMVERYRNHLIFVKADQDPATALWKTATHVQFNEDPRTFRDVWLPRPNVGLRTKKSAEKQMMKEAKKWVDDRLHEEAAKTPSPGSSVLASEQNAPAQSHAEDEQAP
Ga0184635_100224444	3300018072	Groundwater Sediment	MVERYRNHLIFVKADQDPATALWKTATHVQFNEDPRTFRDVWLPRPNVGLRTKKSAEKQMMREARKWVDDRLREVNQETAKTPSPGSSLLASEQDAPAQSHAKDEQAP
Ga0184635_103138711	3300018072	Groundwater Sediment	MVERYRNHLIFVKADQDPATALWKTATHVQFNEDPRTFRDVWLPRPNVGLRTKKSAEKQMMKEAKKWVDDRLHEEAAKTPSPGSSVLASEQNAPAQSHAEDEQAP
Ga0184632_100075309	3300018075	Groundwater Sediment	ATALWKTATHVQFNEDPRTFRDVWLPRPNVGLRTKKSAEKQMMKEARKWVDDRLREGNQEVAKTPSPGSSLLASEQDAPAQLHAEDEQAPCINHY
Ga0184625_100761183	3300018081	Groundwater Sediment	MVERYRNHLIFVKADQNPATALWKAATHIQFNEDPRTFRDVWLPRPNVGLRTKKSAEKQMMKEARKWVDDRLREGNQEVAKTPSSGSSLLASEQDAPAQSHAEDEQAP
Ga0184629_105476671	3300018084	Groundwater Sediment	MVERYRNHLIFVKADQDPATALWKTATHVQFNEDPRTFRDVWLPRPNVGLRTKKSAEKQMMREARKWVDDRLREVNQETAKTPSPGSSLLASEQD
Ga0066667_103487491	3300018433	Grasslands Soil	MVERYRNHLIFVKADQDPATAVWKGATHIQFNEDPRTFRDVWLPRPNVGLRTKKSAEKQMMKEARKWVDDRLREGNQEAAKTPSPSPSLLASEQN
Ga0193727_11679321	3300019886	Soil	MVERYRNHLIFVKADQDPATALWKTATHVQFNEDPRTFRDVWLPRPNVGLRTKKSAEKQMMKEARKWVDDRLHEGNQEAAKTPSPGSSVLASEQNAPAQSHAEDEQAP
Ga0193719_101745071	3300021344	Soil	NNNSRCYEIVGKGVKARRMMVERYRNHLIFVKADQDPATALWKTATHVQFNEDPRTFRDVWLPRPNVGLRTKKSAEKQMMKEAKKWVDDRLHEEAAKTPSPGSSVLASEQNAPAQSHAEDEQAP
Ga0126371_127794342	3300021560	Tropical Forest Soil	MVERYRNHLIFVKADQDPATTLWKAGTHIQFNEDPRTFRDVWLPRPTVGFRTKRNAEKQRMKEAKKWVDDRLLEAKTTKTTSPASNLLDSENSLAEPHEKDKAAPDANSARAE
Ga0224452_11937901	3300022534	Groundwater Sediment	TALWKAATHIQFNEDPRTFRDVWLPRPNVGLRTKKSAEKQMMKEARKWVDDRLREGNQEVAKTPSPGSSLLASEQDAPAQSHAEDEQAP
Ga0222623_101830201	3300022694	Groundwater Sediment	PRCYKIVGKGVKARSMMVERYRNHLIFVKADQDPATALWKAATHIQFNEDPRTFRDVWLPRLNVGLRTKKSAEKQMMKEARKWVDDRLREGNQEVAKTPSPGSSLLASEQDAPAQSHAEDEQAP
Ga0222622_107492061	3300022756	Groundwater Sediment	MVERYRNHLIFVKADQDPATALWKAATHIQFNEDPRTFRDVWLPRPNVGLRTKKSAEKQMMKEARKWVDDRLREGNQEVAKTPSSGSSLLASEQDAPA
Ga0209896_10019933	3300027006	Groundwater Sand	MVERYRNHLIFVKADQDPATALWKAATHIQFNEDPRTFRDVWLPRPHVGLRTKKSAEKQMVKEARKWVDDRLREGNQEAAKTPSPGSNPLASEQNSPAHSHAEDEQTP
Ga0209879_10379571	3300027056	Groundwater Sand	MVERYRNHLIFVKADQDPATALWKAATHIQFNEDPRTFRDVWLPRPHVGLRTKKSAEKQMVKEARKWVDDRLREGNQEAAKTPSPGSNLLASEQNSPAHSHAED
Ga0209875_10011542	3300027209	Groundwater Sand	MVERYRNHLIFVKADQDPATALWKAATHIQFNEDPRTFRDVWLPRPHVGLRTKKSAEKQMVKEARKWVDDRLREGNQEAAKTPSPGSNLLASEQNSPAHSHAHAEDEQTP
Ga0209842_10011911	3300027379	Groundwater Sand	VKADQDPATALWKAATHIQFNEDPRTFRDVWLPRPHVGLRTKKSAEKQMVKEARKWVDDRLREGNQEAAKTPSPGSNPLASEQNSPAHSHAEDEQTP
Ga0209887_100048311	3300027561	Groundwater Sand	MVERYRNHLIFVKADQDPATALWKAATHIQFNEDPRTFRDVWLPRPHVGLRTKKSAEKQMVKEARKWVDDRLREGNQEAAKTPSPGSNLLASEQNSPAHSHAEDEQTP
Ga0209466_10006014	3300027646	Tropical Forest Soil	MVERYRNHLIFVKAEQDPVTALWKAGTHIQFNEDPRTFRDVWLPRPTVGFRTKRNAEKQRMKEAKRWVDDRLLEAKTTKKTSLVSNLLDSENPLAEPHEKDEAAPSANSARAE
Ga0209819_101430132	3300027722	Freshwater Sediment	MVERYRNHLIFVKADQDPVTTLWKAGTHIQFNEDPRTFRDIWLPRPTIGFRTKRNAEKQRMKEARKWVDDRLREGKTTEISSADPGSLVNEQKNALAEPDEGAG
Ga0209814_100998843	3300027873	Populus Rhizosphere	MMVERYRNHLIFVKADQDPATALWRAATHIQFNEDPRTFRDVWLPRPTVSLRTKKSAEKQMMKEARKWVDDRLREGNQEGAKTPPPGSSLLASEQNAPAEDEQSHH
Ga0209481_100963211	3300027880	Populus Rhizosphere	MVERYRNHLIFVKADQDPATALWRAATHIQFNEDPRTFRDVWLPRPTVSLRTKKSAEKQMMKEARKWVDDRLREGNQEGAKTPPPGSSLLASEQNAPAEDEQSHH
Ga0207428_101514711	3300027907	Populus Rhizosphere	MVERYRNHLIFVKADQDPATALWRAATHIQFNEDPRTFRDVWLPRPTVSLRTKKSAEKQMMKEARKWVDDRLREVNREAAKTPSPGSSLLA
Ga0209889_10028664	3300027952	Groundwater Sand	MVERYRNHLIFVKADQDPATALWKAATHIQFNEDPRTFRDVWLPRPHVGLRTKKSAEKQMVKEARKWVDDRLREGNQEAAKTLSPGSNLLASEQNSPAHSHAEDEQTP
Ga0308187_103374761	3300031114	Soil	KARSMMVERYRNHLIFVKADQDPATALWKTATHVQFNEDPRTFRDVWLPRPNVGLRTKKSAEKQMMKEAKKWVDDRLHEEAAKTPSPGSSVLASEQNAPAQSHAEDEQAP
Ga0306917_114409571	3300031719	Soil	MLVERYRNHLIFVKADRDPGTGLWKAGTHVQFNEDPRTFRDVWLPRPAVGSKTIRSTERQAMKEAKRWVDDRLREGNQATANSVGSRLLTSDQTATGNSQEEQ
Ga0307469_100534185	3300031720	Hardwood Forest Soil	MVERYRNHLIFVKADQNPVTALWKAATHIQFNEDPRTFRDVWLPRPNVGLRTKKSAEKQMMKEARKWVDDRLREVNREAAKTPSPGSSLLASEQDAPAQSHAEDEQAR
Ga0307469_106647892	3300031720	Hardwood Forest Soil	MVERYRNHLIFVKADQDPVTTLWKAGTHIQFNEDPRTFRDIWLPRPIIGFRTKRNAEKQRMKEARKWVDDRLREGKTTETSSADPGSVNEPKNALAEPDEGAG
Ga0306923_112371002	3300031910	Soil	MLVERYRNHLIFVKADRDPGTGLWKAGTHVQFNEDPRTFRDVWLPRPAVGSKTIRSTERQAMKEAKRWVDDRLREGNQATANLAGSRLLTSDQTATGN
Ga0306921_114646931	3300031912	Soil	MLVERYRNHLIFVKADRDPGTGLWKAGTHVQFNEDPRTFRDVWLPRPAVGSKTIRSTERQAVKEAKRWVDDRLREGNQATANSVGSRLLTSDQTATGNSQEEQ
Ga0310906_102780633	3300032013	Soil	MVERYLNHLIFVKADQDPATGLWKAGTHVQFNEDTRTFRDVWLPRPNVGLRTRRSAEKQMMKEAKKWVDDRLREGNQQAAKAPSPRSNLLANEPNAPAHSHSEDEQVP
Ga0307471_1013690171	3300032180	Hardwood Forest Soil	RNHLIFVKADQDPVTTLWKAGTHIQFNEDPRTFRDIWLPRPIIGFRTKRNAEKQRMKEARKWVDDRLREGKTTETSSADPGSVNEPKNALAEPDEGAG
Ga0326723_0122356_801_1130	3300034090	Peat Soil	MMVERYRNHLIFVKADQDPVTALWKAATHIQFNEDPRTFRDVWLPRPNVGLRTKKIAEKQMMKEARKWVDDRLREVNREAAKTPSPGSSLLASEQDAPAQSHAEDEQAP
Ga0364929_0005190_2533_2862	3300034149	Sediment	MMVERYRNHLIFVKADQDPATALWKTATHVQFNEDPRTFRDVWLPRPNVGLRTKKSAEKQMMREARKWVDDRLREVNQETAKTPSPGSSLLASEQDAPAQSHAKDEQAP
Ga0364933_167942_212_538	3300034150	Sediment	MVERYRNHLIFVKAHQDPATALWKAATHIQFNEDPRTFRDVWLPRPNVGLRTKKSAEKQMMREARKWVDDRLREVNQETAKTPSPGSSLLASEQDAPAQSHAKDEQAP
Ga0364931_0196745_123_452	3300034176	Sediment	MMVERYRNHLIFVKANQDPATALWKAATHIQFNEDPRTFRDVWLPRPNVGLRTKKNAEKQMMKDARKWVDDRLRERNQEGAKTPSPGSSLLASEQDAPAQSHAKDEQAP
Ga0364943_0045590_817_1146	3300034354	Sediment	MMVERYRNHLIFVKADQDPATALWKTATHVQFNEDPRTFRDVWLPRPNVGLRTKKSAEKQMIREARKWVDDRLREVNQETAKTPSPGSSLLASEQDAPAQSHAKDEQAP
Ga0364943_0265091_282_611	3300034354	Sediment	MMVDRYRNHLIFVKADQDPATALWKAATHIQFNEDPRTFRDVWLPRPNVGLRTKKSAEKQMMKEARKWVDDRLREGNQEAAKTPLPGSGLLASEQNAPAQSHAEDEQAP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F058375

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences