Metagenome / Metatranscriptome Family F058289

Basic Information
Family ID	F058289
Family Type	Metagenome / Metatranscriptome
Number of Sequences	135
Average Sequence Length	72 residues
Representative Sequence	MPSAAYLRRQADICLRLAAIASDEAASSRLLAIHQDYTAKADAMEAGGEAPQDAMTPPGAAQNAGKHGSGAGS
Number of Associated Samples	109
Number of Associated Scaffolds	135

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	11.36 %
% of genes near scaffold ends (potentially truncated)	63.70 %
% of genes from short scaffolds (< 2000 bps)	91.11 %
Associated GOLD sequencing projects	106
AlphaFold2 3D model prediction	No

Most Common Taxonomy
Group	Bacteria (69.630 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (27.407 % of family members)
Environment Ontology (ENVO)	Unclassified (32.593 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (52.593 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 56.16% β-sheet: 0.00% Coil/Unstructured: 43.84%
Feature Viewer

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Pfam ID	Name	% Frequency in 135 Family Scaffolds
PF12071	DUF3551	6.67
PF04209	HgmA_C	0.74

COG ID	Name	Functional Category	% Frequency in 135 Family Scaffolds
COG3508	Homogentisate 1,2-dioxygenase	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.74

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	71.11 %
Unclassified	root	N/A	28.89 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	71.11 %
Unclassified	root	N/A	28.89 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	69.63 %
Unclassified	root	N/A	28.89 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	1.48 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	66.67 %
Unclassified	root	N/A	28.89 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2.22 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	1.48 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	66.67 %
Unclassified	root	N/A	28.89 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2.22 %
Metazoa	kingdom	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa	1.48 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.89 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	16.30 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5.93 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2.22 %
Eumetazoa	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa	1.48 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.89 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	16.30 %
Bifidobacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Bifidobacteriales	2.22 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	1.48 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1.48 %
Bilateria	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria	1.48 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.89 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	16.30 %
Bifidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Bifidobacteriales → Bifidobacteriaceae	2.22 %
Protostomia	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia	1.48 %
Hyphomicrobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium	1.48 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1.48 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.89 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	16.30 %
Bifidobacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Bifidobacteriales → Bifidobacteriaceae → Bifidobacterium	2.22 %
Ecdysozoa	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa	1.48 %
Hyphomicrobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium	1.48 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1.48 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.89 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	16.30 %
Bifidobacterium cuniculi	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Bifidobacteriales → Bifidobacteriaceae → Bifidobacterium → Bifidobacterium cuniculi	2.22 %
Panarthropoda	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda	1.48 %
Hyphomicrobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium	1.48 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1.48 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.89 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	16.30 %
Bifidobacterium cuniculi	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Bifidobacteriales → Bifidobacteriaceae → Bifidobacterium → Bifidobacterium cuniculi	2.22 %
Arthropoda	phylum	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda	1.48 %
Hyphomicrobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium	1.48 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1.48 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.89 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	16.30 %
Bifidobacterium cuniculi	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Bifidobacteriales → Bifidobacteriaceae → Bifidobacterium → Bifidobacterium cuniculi	2.22 %
Mandibulata	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata	1.48 %
Hyphomicrobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium	1.48 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1.48 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.89 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	16.30 %
Bifidobacterium cuniculi	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Bifidobacteriales → Bifidobacteriaceae → Bifidobacterium → Bifidobacterium cuniculi	2.22 %
Pancrustacea	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea	1.48 %
Hyphomicrobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium	1.48 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1.48 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.89 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	16.30 %
Bifidobacterium cuniculi	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Bifidobacteriales → Bifidobacteriaceae → Bifidobacterium → Bifidobacterium cuniculi	2.22 %
Hexapoda	subphylum	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda	1.48 %
Hyphomicrobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium	1.48 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1.48 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.89 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	16.30 %
Bifidobacterium cuniculi	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Bifidobacteriales → Bifidobacteriaceae → Bifidobacterium → Bifidobacterium cuniculi	2.22 %
Insecta	class	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta	1.48 %
Hyphomicrobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium	1.48 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1.48 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.89 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	16.30 %
Bifidobacterium cuniculi	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Bifidobacteriales → Bifidobacteriaceae → Bifidobacterium → Bifidobacterium cuniculi	2.22 %
Dicondylia	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia	1.48 %
Hyphomicrobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium	1.48 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1.48 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.89 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	16.30 %
Bifidobacterium cuniculi	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Bifidobacteriales → Bifidobacteriaceae → Bifidobacterium → Bifidobacterium cuniculi	2.22 %
Pterygota	subclass	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota	1.48 %
Hyphomicrobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium	1.48 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1.48 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.89 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	16.30 %
Bifidobacterium cuniculi	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Bifidobacteriales → Bifidobacteriaceae → Bifidobacterium → Bifidobacterium cuniculi	2.22 %
Neoptera	infraclass	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera	1.48 %
Hyphomicrobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium	1.48 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1.48 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.89 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	16.30 %
Bifidobacterium cuniculi	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Bifidobacteriales → Bifidobacteriaceae → Bifidobacterium → Bifidobacterium cuniculi	2.22 %
Endopterygota	cohort	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Endopterygota	1.48 %
Hyphomicrobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium	1.48 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1.48 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.89 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	16.30 %
Bifidobacterium cuniculi	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Bifidobacteriales → Bifidobacteriaceae → Bifidobacterium → Bifidobacterium cuniculi	2.22 %
Diptera	order	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Endopterygota → Diptera	1.48 %
Hyphomicrobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium	1.48 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1.48 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.89 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	16.30 %
Bifidobacterium cuniculi	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Bifidobacteriales → Bifidobacteriaceae → Bifidobacterium → Bifidobacterium cuniculi	2.22 %
Brachycera	suborder	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Endopterygota → Diptera → Brachycera	1.48 %
Hyphomicrobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium	1.48 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1.48 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.89 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	16.30 %
Bifidobacterium cuniculi	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Bifidobacteriales → Bifidobacteriaceae → Bifidobacterium → Bifidobacterium cuniculi	2.22 %
Muscomorpha	infraorder	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Endopterygota → Diptera → Brachycera → Muscomorpha	1.48 %
Hyphomicrobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium	1.48 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1.48 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.89 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	16.30 %
Bifidobacterium cuniculi	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Bifidobacteriales → Bifidobacteriaceae → Bifidobacterium → Bifidobacterium cuniculi	2.22 %
Eremoneura	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Endopterygota → Diptera → Brachycera → Muscomorpha → Eremoneura	1.48 %
Hyphomicrobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium	1.48 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1.48 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.89 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	16.30 %
Bifidobacterium cuniculi	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Bifidobacteriales → Bifidobacteriaceae → Bifidobacterium → Bifidobacterium cuniculi	2.22 %
Cyclorrhapha	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Endopterygota → Diptera → Brachycera → Muscomorpha → Eremoneura → Cyclorrhapha	1.48 %
Hyphomicrobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium	1.48 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1.48 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.89 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	16.30 %
Bifidobacterium cuniculi	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Bifidobacteriales → Bifidobacteriaceae → Bifidobacterium → Bifidobacterium cuniculi	2.22 %
Schizophora	no rank	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Endopterygota → Diptera → Brachycera → Muscomorpha → Eremoneura → Cyclorrhapha → Schizophora	1.48 %
Hyphomicrobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium	1.48 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1.48 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.89 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	16.30 %
Bifidobacterium cuniculi	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Bifidobacteriales → Bifidobacteriaceae → Bifidobacterium → Bifidobacterium cuniculi	2.22 %
Acalyptratae	no rank	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Endopterygota → Diptera → Brachycera → Muscomorpha → Eremoneura → Cyclorrhapha → Schizophora → Acalyptratae	1.48 %
Hyphomicrobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium	1.48 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1.48 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.89 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	16.30 %
Bifidobacterium cuniculi	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Bifidobacteriales → Bifidobacteriaceae → Bifidobacterium → Bifidobacterium cuniculi	2.22 %
Ephydroidea	superfamily	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Endopterygota → Diptera → Brachycera → Muscomorpha → Eremoneura → Cyclorrhapha → Schizophora → Acalyptratae → Ephydroidea	1.48 %
Hyphomicrobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium	1.48 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1.48 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.89 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	16.30 %
Bifidobacterium cuniculi	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Bifidobacteriales → Bifidobacteriaceae → Bifidobacterium → Bifidobacterium cuniculi	2.22 %
Drosophilidae	family	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Endopterygota → Diptera → Brachycera → Muscomorpha → Eremoneura → Cyclorrhapha → Schizophora → Acalyptratae → Ephydroidea → Drosophilidae	1.48 %
Hyphomicrobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium	1.48 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1.48 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.89 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	16.30 %
Bifidobacterium cuniculi	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Bifidobacteriales → Bifidobacteriaceae → Bifidobacterium → Bifidobacterium cuniculi	2.22 %
Drosophilinae	subfamily	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Endopterygota → Diptera → Brachycera → Muscomorpha → Eremoneura → Cyclorrhapha → Schizophora → Acalyptratae → Ephydroidea → Drosophilidae → Drosophilinae	1.48 %
Hyphomicrobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium	1.48 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1.48 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.89 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	16.30 %
Bifidobacterium cuniculi	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Bifidobacteriales → Bifidobacteriaceae → Bifidobacterium → Bifidobacterium cuniculi	2.22 %
Drosophilini	tribe	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Endopterygota → Diptera → Brachycera → Muscomorpha → Eremoneura → Cyclorrhapha → Schizophora → Acalyptratae → Ephydroidea → Drosophilidae → Drosophilinae → Drosophilini	1.48 %
Hyphomicrobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium	1.48 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1.48 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.89 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	16.30 %
Bifidobacterium cuniculi	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Bifidobacteriales → Bifidobacteriaceae → Bifidobacterium → Bifidobacterium cuniculi	2.22 %
Drosophila	genus	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Endopterygota → Diptera → Brachycera → Muscomorpha → Eremoneura → Cyclorrhapha → Schizophora → Acalyptratae → Ephydroidea → Drosophilidae → Drosophilinae → Drosophilini → Drosophila	1.48 %
Hyphomicrobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium	1.48 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1.48 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.89 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	16.30 %
Bifidobacterium cuniculi	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Bifidobacteriales → Bifidobacteriaceae → Bifidobacterium → Bifidobacterium cuniculi	2.22 %
Sophophora	subgenus	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Endopterygota → Diptera → Brachycera → Muscomorpha → Eremoneura → Cyclorrhapha → Schizophora → Acalyptratae → Ephydroidea → Drosophilidae → Drosophilinae → Drosophilini → Drosophila → Sophophora	1.48 %
Hyphomicrobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium	1.48 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1.48 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.89 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	16.30 %
Bifidobacterium cuniculi	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Bifidobacteriales → Bifidobacteriaceae → Bifidobacterium → Bifidobacterium cuniculi	2.22 %
melanogaster group	species group	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Endopterygota → Diptera → Brachycera → Muscomorpha → Eremoneura → Cyclorrhapha → Schizophora → Acalyptratae → Ephydroidea → Drosophilidae → Drosophilinae → Drosophilini → Drosophila → Sophophora → melanogaster group	1.48 %
Hyphomicrobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium	1.48 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1.48 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.89 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	16.30 %
Bifidobacterium cuniculi	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Bifidobacteriales → Bifidobacteriaceae → Bifidobacterium → Bifidobacterium cuniculi	2.22 %
melanogaster subgroup	species subgroup	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Endopterygota → Diptera → Brachycera → Muscomorpha → Eremoneura → Cyclorrhapha → Schizophora → Acalyptratae → Ephydroidea → Drosophilidae → Drosophilinae → Drosophilini → Drosophila → Sophophora → melanogaster group → melanogaster subgroup	1.48 %
Hyphomicrobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium	1.48 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1.48 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.89 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	16.30 %
Bifidobacterium cuniculi	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Bifidobacteriales → Bifidobacteriaceae → Bifidobacterium → Bifidobacterium cuniculi	2.22 %
Drosophila erecta	species	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Endopterygota → Diptera → Brachycera → Muscomorpha → Eremoneura → Cyclorrhapha → Schizophora → Acalyptratae → Ephydroidea → Drosophilidae → Drosophilinae → Drosophilini → Drosophila → Sophophora → melanogaster group → melanogaster subgroup → Drosophila erecta	1.48 %
Hyphomicrobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium	1.48 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1.48 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000956\|JGI10216J12902_103508598	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	764	Open in IMG/M
3300001686\|C688J18823_10215187	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1291	Open in IMG/M
3300001976\|JGI24752J21851_1061911	Not Available	517	Open in IMG/M
3300002239\|JGI24034J26672_10096178	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Endopterygota → Diptera → Brachycera → Muscomorpha → Eremoneura → Cyclorrhapha → Schizophora → Acalyptratae → Ephydroidea → Drosophilidae → Drosophilinae → Drosophilini → Drosophila → Sophophora → melanogaster group → melanogaster subgroup → Drosophila erecta	554	Open in IMG/M
3300002244\|JGI24742J22300_10012814	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1400	Open in IMG/M
3300003162\|Ga0006778J45830_1115456	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Endopterygota → Diptera → Brachycera → Muscomorpha → Eremoneura → Cyclorrhapha → Schizophora → Acalyptratae → Ephydroidea → Drosophilidae → Drosophilinae → Drosophilini → Drosophila → Sophophora → melanogaster group → melanogaster subgroup → Drosophila erecta	539	Open in IMG/M
3300004114\|Ga0062593_100535138	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1097	Open in IMG/M
3300004643\|Ga0062591_102998670	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	501	Open in IMG/M
3300004798\|Ga0058859_11458928	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Bifidobacteriales → Bifidobacteriaceae → Bifidobacterium → Bifidobacterium cuniculi	541	Open in IMG/M
3300004801\|Ga0058860_12202607	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Bifidobacteriales → Bifidobacteriaceae → Bifidobacterium → Bifidobacterium cuniculi	553	Open in IMG/M
3300005093\|Ga0062594_103072187	Not Available	522	Open in IMG/M
3300005147\|Ga0066821_1011561	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	649	Open in IMG/M
3300005160\|Ga0066820_1002388	Not Available	916	Open in IMG/M
3300005168\|Ga0066809_10127223	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	645	Open in IMG/M
3300005169\|Ga0066810_10189424	Not Available	512	Open in IMG/M
3300005333\|Ga0070677_10816770	Not Available	533	Open in IMG/M
3300005337\|Ga0070682_101748319	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	541	Open in IMG/M
3300005340\|Ga0070689_101611286	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	590	Open in IMG/M
3300005367\|Ga0070667_100043505	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	3769	Open in IMG/M
3300005455\|Ga0070663_101393399	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Bifidobacteriales → Bifidobacteriaceae → Bifidobacterium → Bifidobacterium cuniculi	621	Open in IMG/M
3300005456\|Ga0070678_101304367	Not Available	675	Open in IMG/M
3300005457\|Ga0070662_100239438	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1455	Open in IMG/M
3300005544\|Ga0070686_100004979	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	7329	Open in IMG/M
3300005544\|Ga0070686_101312102	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	605	Open in IMG/M
3300005545\|Ga0070695_101641175	Not Available	537	Open in IMG/M
3300005548\|Ga0070665_100984652	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	855	Open in IMG/M
3300006038\|Ga0075365_10097419	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2011	Open in IMG/M
3300006038\|Ga0075365_10156152	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1588	Open in IMG/M
3300006038\|Ga0075365_10467941	Not Available	890	Open in IMG/M
3300006178\|Ga0075367_10367519	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	908	Open in IMG/M
3300006237\|Ga0097621_100154099	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1971	Open in IMG/M
3300006580\|Ga0074049_12870781	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	860	Open in IMG/M
3300006605\|Ga0074057_12328881	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1181	Open in IMG/M
3300009011\|Ga0105251_10501754	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	567	Open in IMG/M
3300009036\|Ga0105244_10235655	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	856	Open in IMG/M
3300009156\|Ga0111538_10156345	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2896	Open in IMG/M
3300009156\|Ga0111538_13639338	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	534	Open in IMG/M
3300009176\|Ga0105242_10275568	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1526	Open in IMG/M
3300009840\|Ga0126313_10646441	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	854	Open in IMG/M
3300010036\|Ga0126305_10963585	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	584	Open in IMG/M
3300010045\|Ga0126311_11038688	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	671	Open in IMG/M
3300010373\|Ga0134128_10044226	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5180	Open in IMG/M
3300010373\|Ga0134128_11478259	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	748	Open in IMG/M
3300010373\|Ga0134128_12816003	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	536	Open in IMG/M
3300010397\|Ga0134124_11660653	Not Available	670	Open in IMG/M
3300010400\|Ga0134122_12069875	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	609	Open in IMG/M
3300011106\|Ga0151489_1745789	Not Available	528	Open in IMG/M
3300011119\|Ga0105246_10920042	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	786	Open in IMG/M
3300012212\|Ga0150985_101149035	Not Available	564	Open in IMG/M
3300012212\|Ga0150985_103356035	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	802	Open in IMG/M
3300012212\|Ga0150985_108907827	Not Available	520	Open in IMG/M
3300012212\|Ga0150985_109955062	Not Available	546	Open in IMG/M
3300012212\|Ga0150985_111311095	Not Available	559	Open in IMG/M
3300012212\|Ga0150985_112453916	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	967	Open in IMG/M
3300012212\|Ga0150985_117439896	Not Available	506	Open in IMG/M
3300012212\|Ga0150985_117626218	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	935	Open in IMG/M
3300012212\|Ga0150985_118977786	Not Available	500	Open in IMG/M
3300012469\|Ga0150984_101857858	Not Available	560	Open in IMG/M
3300012469\|Ga0150984_104329181	Not Available	708	Open in IMG/M
3300012469\|Ga0150984_110570696	Not Available	605	Open in IMG/M
3300012469\|Ga0150984_114031202	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium	1041	Open in IMG/M
3300012469\|Ga0150984_114828052	Not Available	540	Open in IMG/M
3300012469\|Ga0150984_114881880	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1513	Open in IMG/M
3300012469\|Ga0150984_121180005	Not Available	567	Open in IMG/M
3300012469\|Ga0150984_123614755	Not Available	841	Open in IMG/M
3300012901\|Ga0157288_10307213	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	557	Open in IMG/M
3300012914\|Ga0157297_10300362	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	604	Open in IMG/M
3300012986\|Ga0164304_10173653	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1382	Open in IMG/M
3300013105\|Ga0157369_11903057	Not Available	604	Open in IMG/M
3300013306\|Ga0163162_11018774	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	936	Open in IMG/M
3300014325\|Ga0163163_10123017	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2630	Open in IMG/M
3300014326\|Ga0157380_10123681	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2195	Open in IMG/M
3300014745\|Ga0157377_11718014	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	507	Open in IMG/M
3300014968\|Ga0157379_10044061	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3984	Open in IMG/M
3300015201\|Ga0173478_10279263	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	746	Open in IMG/M
3300015371\|Ga0132258_12436031	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1310	Open in IMG/M
3300015374\|Ga0132255_100788690	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1416	Open in IMG/M
3300018000\|Ga0184604_10154639	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	759	Open in IMG/M
3300018066\|Ga0184617_1184322	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	620	Open in IMG/M
3300018082\|Ga0184639_10247888	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	942	Open in IMG/M
3300018469\|Ga0190270_10164387	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1824	Open in IMG/M
3300018469\|Ga0190270_10724898	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	990	Open in IMG/M
3300018476\|Ga0190274_10368996	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1375	Open in IMG/M
3300018481\|Ga0190271_10679259	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1152	Open in IMG/M
3300019263\|Ga0184647_1184503	Not Available	621	Open in IMG/M
3300019356\|Ga0173481_10536123	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	603	Open in IMG/M
3300019876\|Ga0193703_1032932	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	805	Open in IMG/M
3300019889\|Ga0193743_1243824	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	530	Open in IMG/M
3300020016\|Ga0193696_1120939	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	663	Open in IMG/M
3300020016\|Ga0193696_1127045	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	643	Open in IMG/M
3300021082\|Ga0210380_10134576	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1104	Open in IMG/M
3300021082\|Ga0210380_10271994	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	769	Open in IMG/M
3300025315\|Ga0207697_10120375	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1129	Open in IMG/M
3300025912\|Ga0207707_11321375	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	578	Open in IMG/M
3300025919\|Ga0207657_10801110	Not Available	728	Open in IMG/M
3300025920\|Ga0207649_10150528	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1602	Open in IMG/M
3300025923\|Ga0207681_10189643	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1572	Open in IMG/M
3300025944\|Ga0207661_10983705	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	777	Open in IMG/M
3300025949\|Ga0207667_11044700	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	802	Open in IMG/M
3300025961\|Ga0207712_10215473	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1532	Open in IMG/M
3300025981\|Ga0207640_10383565	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1139	Open in IMG/M
3300026035\|Ga0207703_11100383	Not Available	763	Open in IMG/M
3300026067\|Ga0207678_10546918	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1012	Open in IMG/M
3300027310\|Ga0207983_1005146	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1429	Open in IMG/M
3300027866\|Ga0209813_10400041	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	553	Open in IMG/M
3300028379\|Ga0268266_10453389	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1219	Open in IMG/M
3300028596\|Ga0247821_10955793	Not Available	572	Open in IMG/M
3300028704\|Ga0307321_1022170	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1123	Open in IMG/M
3300028710\|Ga0307322_10015309	All Organisms → cellular organisms → Bacteria	1731	Open in IMG/M
3300028712\|Ga0307285_10153445	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	631	Open in IMG/M
3300028714\|Ga0307309_10026142	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1169	Open in IMG/M
3300028720\|Ga0307317_10019983	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2043	Open in IMG/M
3300028720\|Ga0307317_10058799	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium	1241	Open in IMG/M
3300028722\|Ga0307319_10109039	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	889	Open in IMG/M
3300028782\|Ga0307306_10089278	Not Available	811	Open in IMG/M
3300028796\|Ga0307287_10063792	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1367	Open in IMG/M
3300028872\|Ga0307314_10173103	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	636	Open in IMG/M
3300028876\|Ga0307286_10290374	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	603	Open in IMG/M
3300030829\|Ga0308203_1021285	Not Available	845	Open in IMG/M
3300030902\|Ga0308202_1037995	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	841	Open in IMG/M
3300030903\|Ga0308206_1065484	Not Available	753	Open in IMG/M
3300030990\|Ga0308178_1161221	Not Available	522	Open in IMG/M
3300031058\|Ga0308189_10100577	Not Available	916	Open in IMG/M
3300031058\|Ga0308189_10410066	Not Available	562	Open in IMG/M
3300031091\|Ga0308201_10273987	Not Available	591	Open in IMG/M
3300031092\|Ga0308204_10174351	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	655	Open in IMG/M
3300031152\|Ga0307501_10018908	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1282	Open in IMG/M
3300031170\|Ga0307498_10164289	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	748	Open in IMG/M
3300031455\|Ga0307505_10083271	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1427	Open in IMG/M
3300031854\|Ga0310904_10163811	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1306	Open in IMG/M
3300031858\|Ga0310892_10669942	Not Available	709	Open in IMG/M
3300032012\|Ga0310902_10581698	Not Available	741	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	27.41%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	6.67%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	6.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.93%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	3.70%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	3.70%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	3.70%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	3.70%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	2.22%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.22%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	2.22%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.22%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	2.22%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	2.22%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.22%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.96%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	2.96%
Host-Associated	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated	1.48%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.48%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.48%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.48%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.48%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.74%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.74%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.74%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.74%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.74%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.74%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.74%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.74%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.74%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.74%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.74%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001686	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300001976	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S7	Host-Associated	Open in IMG/M
3300002239	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S2	Host-Associated	Open in IMG/M
3300002244	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M1	Host-Associated	Open in IMG/M
3300003162	Avena fatua rhizosphere microbial communities - H4_Rhizo_Litter_21 (Metagenome Metatranscriptome, Counting Only)	Host-Associated	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300004798	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-2 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300004801	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-3 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005147	Soil and rhizosphere microbial communities from Laval, Canada - mgLMC	Environmental	Open in IMG/M
3300005160	Soil and rhizosphere microbial communities from Laval, Canada - mgLMB	Environmental	Open in IMG/M
3300005168	Soil and rhizosphere microbial communities from Laval, Canada - mgLPC	Environmental	Open in IMG/M
3300005169	Soil and rhizosphere microbial communities from Laval, Canada - mgHPA	Environmental	Open in IMG/M
3300005333	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG	Host-Associated	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300006038	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5	Host-Associated	Open in IMG/M
3300006178	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2	Host-Associated	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006580	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPC (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006605	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300009011	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG	Host-Associated	Open in IMG/M
3300009036	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300011106	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMC (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012901	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S119-311C-1	Environmental	Open in IMG/M
3300012914	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S028-104C-2	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015201	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S014-104B-1 (version 2)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300018000	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_coex	Environmental	Open in IMG/M
3300018066	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_b1	Environmental	Open in IMG/M
3300018082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b2	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300019263	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300019876	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3a2	Environmental	Open in IMG/M
3300019889	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2c2	Environmental	Open in IMG/M
3300020016	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3m1	Environmental	Open in IMG/M
3300021082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_coex redo	Environmental	Open in IMG/M
3300025315	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Host-Associated	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025949	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027310	Soil and rhizosphere microbial communities from Laval, Canada - mgHMB (SPAdes)	Environmental	Open in IMG/M
3300027866	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes)	Host-Associated	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028596	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glycerol_Day14	Environmental	Open in IMG/M
3300028704	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_379	Environmental	Open in IMG/M
3300028710	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_380	Environmental	Open in IMG/M
3300028712	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_139	Environmental	Open in IMG/M
3300028714	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_196	Environmental	Open in IMG/M
3300028720	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_357	Environmental	Open in IMG/M
3300028722	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_368	Environmental	Open in IMG/M
3300028782	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_193	Environmental	Open in IMG/M
3300028796	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_141	Environmental	Open in IMG/M
3300028811	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300028872	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_204	Environmental	Open in IMG/M
3300028876	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_140	Environmental	Open in IMG/M
3300030829	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_357 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030902	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_356 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030903	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_369 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030990	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_149 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031058	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_184 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031091	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_355 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031092	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_367 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031152	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 15_S	Environmental	Open in IMG/M
3300031170	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_S	Environmental	Open in IMG/M
3300031455	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 23_S	Environmental	Open in IMG/M
3300031854	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1	Environmental	Open in IMG/M
3300031858	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2	Environmental	Open in IMG/M
3300032012	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3	Environmental	Open in IMG/M

Geographical Distribution

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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F058289

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI10216J12902_1035085982	3300000956	Soil	MPSAAYLRRQADICLRLAAIASDEAASSRLLAIHQDYKAKADAMEAGGEAPKDAMTPHGPAQNAGKHGSGAGS*
C688J18823_102151873	3300001686	Soil	RLAAIASDEAASSRLLAIHQDYTAKADAMEAGGEAPQDAMTPPGAAQNAGKHGSGAGS*
JGI24752J21851_10619111	3300001976	Corn, Switchgrass And Miscanthus Rhizosphere	LRLAAIASDEAASSRLLAIHQDYTAKADAMEAGGEAPQDAMTPPGAAQNAGKHGSGAGS*
JGI24034J26672_100961781	3300002239	Corn, Switchgrass And Miscanthus Rhizosphere	SPPADICLRLAAIASDEAASSRLLAIHQDYTAKADAMEAGGEAPQDAMTPPGAAQNAGKHGSGAGS*
JGI24742J22300_100128141	3300002244	Corn, Switchgrass And Miscanthus Rhizosphere	PPADICLRLAAIASDEAASSRLLAIHQDYTAKADAMEAGGEAPQDAMTPPGAAQNAGKHGSGAGS*
Ga0006778J45830_11154561	3300003162	Avena Fatua Rhizosphere	LSSPPADICLRLAAIASDEAASSRLLAIHQDSKADAMEAGGEAPQDAMTPPGAAQNAGKHGSGAGS*
Ga0062593_1005351381	3300004114	Soil	LRLAAIASDEAASSRLLAIHRDYTAKADALEAEGDSALTPPDASPGAEKHGSGAGS*
Ga0062591_1029986702	3300004643	Soil	MPSAAYLRRQADICLRLAAIASDEAASSRLLAIHRDYTAKADALEAEGDSALTPPDASPGAEKHGSGAGS*
Ga0058859_114589281	3300004798	Host-Associated	MPSAAYLRRQADICLRLAAIASDEAASSRLLAIHQDYTAKADAMEAGGEAPQDAMTPPGAAQNAGKHGSGAGS*
Ga0058860_122026071	3300004801	Host-Associated	CMPSAAYLRRQADICLRLAAIASDEAASSRLLAIHQDYTAKADAMEAGGEAPQDAMTPPGAAQNAGKHGSGAGS*
Ga0062594_1030721871	3300005093	Soil	RLAAIASDEATSSRLLAIHRDYTAKADALEAEGDSSVTQPDASPGAEKHGSDAGS*
Ga0066821_10115612	3300005147	Soil	LSLHAECRLSSPPADICLRLAAIASDEAASSRLLAIHQDYTAKADAMEAGGEAPQDAMTPPGAAQNAGKHGSGAGS*
Ga0066820_10023882	3300005160	Soil	LHAECRLSSPPADICLRLAAIASDEAASSRLLAIHQDYTAKADAMEAGGEAPQDAMTPPGAAQNAGKHGSGAGS*
Ga0066809_101272232	3300005168	Soil	MPSAAYLRRQADICLRLAAIASDEAASSRLLAIHQDYTAKADAMDVGGEAPQDAMTPPALNAGKHGSGAGS*
Ga0066810_101894242	3300005169	Soil	LHAECRLSSPPADICLRLAAIASDEAASSRLLAIHQDYTAKADAMEAGGEAPQDAMTPPGAAQNPGKHGSGAGS*
Ga0070677_108167701	3300005333	Miscanthus Rhizosphere	RLSSPPADICLRLAAIASDEAASSRLLAIHQDYTAKADAMEAGGEAPQDAMTPPGAAQNAGKHGSGAGS*
Ga0070666_101858933	3300005335	Switchgrass Rhizosphere	IASDEAASSRLLAIHQDYTAKADAMEAGGEAPQDAMTPPGAAQNAGKHGSGAGS*
Ga0070682_1017483192	3300005337	Corn Rhizosphere	MPSAAYLRRQADICLRLAAIASDEATSSRLLAIHRDYTAKADAREAEGDSALTPPDASPGAEKHGSGAGS*
Ga0070689_1016112862	3300005340	Switchgrass Rhizosphere	LGGFRVGGHWGCPCMPSAAYLRRQADICLRLAAIASDEAASSRLLAIHQDYTAKADAMDVGGEAPQDAMTPPAQNAGKHGSGAGS*
Ga0070667_1000435053	3300005367	Switchgrass Rhizosphere	LELSLHAECRLSSPPADICLRLAAIASDEAASSRLLAIHQDYTAKADAMEPGEEAPQDAMTPPGAAQNAGKHGSGAGS*
Ga0070663_1013933991	3300005455	Corn Rhizosphere	MPSAAYLRRQADICLRLAAIASDEAASSRLLAIHQDYTAKADAMEAGAEAPQDTMTPPGPAQNAGKHGSGAGS*
Ga0070678_1013043671	3300005456	Miscanthus Rhizosphere	PDPFLCGTLGRVSRWRPLGLSLHAECRLSSPPADICLRLAAIASDEAASSRLLAIHQDYTAKADAMEAGGEAPQDAMTPPGAAQNAGKHGSGAGS*
Ga0070662_1002394383	3300005457	Corn Rhizosphere	RPLGLSLHAECRLSSPPADICLRLAAIASDEAASSRLLAIHQDYTAKADAMEAGGEAPQDAMTPPGAAQNAGKHGSGAGS*
Ga0070686_1000049792	3300005544	Switchgrass Rhizosphere	MPSAAYLRRQADICLRLAAIASDEAASSRLLAIHQDYTAKADAMDVGGEAPQDAMTPPAQNAGKHGSGAGS*
Ga0070686_1013121021	3300005544	Switchgrass Rhizosphere	AAYLRRQADICLRLAAIASDEATSSRLLAIHRDYTAKADALEAEGDSSVTQPDASPGAEKHGSDAGS*
Ga0070695_1016411752	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	PFLCGTLGRVSRWRPLGLSLHAECRLSSPPADICLRLAAIASDEAASSRLLAIHQDYTAKADAMEAGGEAPQDAMTPPGAAQNAGKHGSGAVS*
Ga0070665_1009846521	3300005548	Switchgrass Rhizosphere	MPSAAYLRRQADICLRLAAIASDEAASSRLLAIHQDYTAKADAMEAGGEAPQDAMTPPGAAQNAGKHGSGAG
Ga0075365_100974193	3300006038	Populus Endosphere	MPSVAYLRRQADICLRLAAIASDDAASSRLLAIHQDYTAKADALEAAGEAPMAQPDAAPGTEKHGSGAGS*
Ga0075365_101561522	3300006038	Populus Endosphere	MPSAAYLRRQADICLRLAAIASDEAASSRLLAIHQDYTAKADAMEAGGEAPQDAMTPPGPAQNAGKQGSGAGS*
Ga0075365_104679411	3300006038	Populus Endosphere	PCMPSAAYLRRQADICLRLAAIASDEAASSRLLAIHQDYTAKADAMEAGAEAPQDTMTPPGPAQNAGKHGSGAGS*
Ga0075367_103675191	3300006178	Populus Endosphere	RVGGYWGCPCMPSAAYLRRQADICLRLAAIASDEAASSRLLAIHQDYTAKADAMEAGAEAPQDTMTPPGPAQNAGKHGSGAGS*
Ga0097621_1001540995	3300006237	Miscanthus Rhizosphere	VPPPADICLRLAAIASDEAASSRLLAIHQDYTAKADAMEAGGEAPQDAMTPPGAAQNAGKHGS
Ga0074049_128707811	3300006580	Soil	LHAECRLSSPPADICLRLAAIASDEAASSRLLAIHQDYTAKADAMEAGGEAPQDAMTPPGAAQNAGKHGSGAVS*
Ga0074057_123288812	3300006605	Soil	MPSAAYLRRQADICLRLAAIASDEAASSRLLAIHQDYTAKADAMEAGGEAPQDAMTPPGAAQNAGKHGSGAVS*
Ga0105251_105017541	3300009011	Switchgrass Rhizosphere	MPSAAYLRRQADICLRLAAIASDEAASSRLLAIHQDYTAKADAMEAGGEAPQDAMTPPGAAQNVGKHGSGAGS*
Ga0105244_102356551	3300009036	Miscanthus Rhizosphere	LGLSLHAECRLSSPPADICLRLAAIASDEAASSRLLAIHQDYTAKADAMEAGGEAPQDAMTPPGAAQNAGKHGSGAGS*
Ga0111538_101563451	3300009156	Populus Rhizosphere	MPSAAYLRRQADICLRLAAIASDEVASSRLLAIHQDYADALEAEGESAMTQPDASPVTEKHGSG
Ga0111538_136393381	3300009156	Populus Rhizosphere	MPSAAYLRRQADICLRLAAIASDEATSSRLLAIHRDYTAKADALEAEGDSSVTQPDASPGAEKHGSDAGS*
Ga0105242_102755681	3300009176	Miscanthus Rhizosphere	LGRVSRWGPLELSLHAECRLSSPPADICLRLAAIASDEAASSRLLAIHQDYTAKADAMEAGGEAPQDAMTPPGAAQNAGKHGSGAGS*
Ga0126313_106464411	3300009840	Serpentine Soil	MPSAAYLRRQADICLRLAAIASDEAASSRLLAIHHHYTAKADAMEAGGEAPQNAMTPSGIEQNAGKHGSGVGS*
Ga0126305_109635852	3300010036	Serpentine Soil	MPSAAYLRRQADICLRLAAIASDEAASSRLLAIHQDYTAKADALEAEGESAMTQPDASPGAEKH
Ga0126311_110386882	3300010045	Serpentine Soil	MPSAAYLRRQADICLRLAAIASDEAASSRLLAIHQDYTAKADAMEAGGEAPQDAMTPPGAAHAGKHG
Ga0134128_100442267	3300010373	Terrestrial Soil	LELSLHAECRLSSPPADICLRLAAIASDEAASSRLLAIHQDYTAKADAMEAGGEAPQDAMTPPGAAQNAGKHGSGAGS*
Ga0134128_114782591	3300010373	Terrestrial Soil	ADICLRLAAIASDEATSSRLLAIHRDYTAKADALEAEGDSALTPPYASPGAEKHGSGAGS
Ga0134128_128160031	3300010373	Terrestrial Soil	MPSAAYLRRQADICLRLAAIASDEAASSRLLAIHQDYKAKADAMEAGGEAPQDAMTPHGSAQNAGKHGSGAGS*
Ga0134124_116606531	3300010397	Terrestrial Soil	LAAIGVVLACRVPPPADICLRLAAIASDEAASSRLLAIHQDYTAKADAMEAGGEAPQDAMTPPGAAQNAGKHGSGAGS*
Ga0134122_120698751	3300010400	Terrestrial Soil	MPSAAYLRRQADICLRLAAIASDEAASSRLLAIHQDYTAKADAMEAGGEAAQDAMTPHGPAQNAGKHGSGAGS*
Ga0151489_17457891	3300011106	Soil	CRLSSPPADICLRLAAIASDEAASSRLLAIHQDYTAKADAMEAGGEAPQDAMTPPGAAQNAGKHGSGAGS*
Ga0105246_109200422	3300011119	Miscanthus Rhizosphere	MPSAAYLRRQADICLRLAAIASDEAASSRLLAIHQDYTAKADAMDVGGEAPQDAMTPPAQNAGKH
Ga0150985_1011490351	3300012212	Avena Fatua Rhizosphere	PCMPSAAYLRRQADICLRLAAIASDEAASSRLLAIHHHYTAKADAMEAGGEAPQNAMTPSGIEQNAGKHGSGVGS*
Ga0150985_1033560352	3300012212	Avena Fatua Rhizosphere	MPSAAYLRRQADICLRLAAIASDEAASSRLLAIHQDYTAKADAMEAGGDAPHDAITSPGAAQNAGKHGSGAGS*
Ga0150985_1089078271	3300012212	Avena Fatua Rhizosphere	LAAIASDEAASSRLLAIHQDYTAKADAMEAGGEAPKDAMTPHGPAQNAGKHGSGAGS*
Ga0150985_1099550622	3300012212	Avena Fatua Rhizosphere	PSAAYLRRQADICLRLAAIASDEAASSRLLAIHQDYTAKADALEAEGDSALTPPGASPGAEKHGSGAGS*
Ga0150985_1113110951	3300012212	Avena Fatua Rhizosphere	SAAYLRRQADICLRLAAIASDEAASSRLLAIHQDYTAKADAMEAGGEAPQDAMTPPGAAHAGKHGSSAGS*
Ga0150985_1124539161	3300012212	Avena Fatua Rhizosphere	PCMPSAAYLRRQADICLRLAAIASDEAASSRLLAIHQDYTAKADALEAEGESAMTQPDASPGTEKHGSGAGS*
Ga0150985_1174398961	3300012212	Avena Fatua Rhizosphere	RQADICLRLAAIASDEAASSRLLAIHQDYTAKADALEAQGESAITQPDASPGVEKHGSGAGS*
Ga0150985_1176262181	3300012212	Avena Fatua Rhizosphere	SAAYLRRQADICLRLAAIASDEAASSRLLAIHQDYTAKADALEAEGEPAMTQPDASPGAEKHGSGAGS*
Ga0150985_1189777861	3300012212	Avena Fatua Rhizosphere	PCMPSAAYLRRQADICLRLAAIASDEAASSRLLAIHQDYTAKADAMEAGGEAPQDAMTPPGAAQNAGKHGSGAGS*
Ga0150984_1018578581	3300012469	Avena Fatua Rhizosphere	PSAAYLRRQADICLRLAAIASDEAASSRLLAIHQDYTAKADAMDVGGEAPQDAMTPPAQNAGKHGSGAGS*
Ga0150984_1043291811	3300012469	Avena Fatua Rhizosphere	RRQADICLRLAAIASDEAASSRLLAIHQDYTAKADALEAEGDSALTPPGASPGAEKHGSGAGS*
Ga0150984_1105706961	3300012469	Avena Fatua Rhizosphere	PCMPSAAYLRRQADICLRLAAIASDEAASSRLLAIHHHYTAKADAMEAGGEAPQNAMTPPGIEQNAGKHGSGVGSCEFDADMIKSTS*
Ga0150984_1140312023	3300012469	Avena Fatua Rhizosphere	PSAAYLRRQADICLRLAAIASDEAASSRLLAIHQDYTAKADALEAEGESAMTQPDASPGTEKHGSGAGS*
Ga0150984_1148280521	3300012469	Avena Fatua Rhizosphere	MPSAAYLRRQADICLRLAAIASDEAASSRLLAIHQDYTAKADALEAEGESAMTQPDASSGAEKHGSGAGS*
Ga0150984_1148818803	3300012469	Avena Fatua Rhizosphere	LHAECRLSSPPADICLRLAAIASDEAASSHLLAIHQDSKADAMEAGGEAPQDAMTPPGAAQNAGKHGSGAGS*
Ga0150984_1211800051	3300012469	Avena Fatua Rhizosphere	MPSAAYLRRQADICLRLAAIASDEAASSRLLAIHQDYTAKADAMEAGGEAPQDAMTPPGAAHAGKHGSSAGS*
Ga0150984_1236147552	3300012469	Avena Fatua Rhizosphere	CMPSAAYLRRQADICLRLAAIASDEAASSRLLAIHQDYTAKADAMEAGGEAPKDAMTPHGPAQNAGKHGSGAGS*
Ga0157288_103072131	3300012901	Soil	MPSAAYLRRQADICLRLAAIASDEAASSRLLAIHQDYTAKADAMEAGGEAPQDAMTPHGSAQNAGKHGSGAGS*
Ga0157297_103003621	3300012914	Soil	MPSAAYLRRQADICLRLAAIASDEAASSRLLAIHRDYTAKADAMEAGGEAPQDAMTPPGAAQNAGKHGFGAGS*
Ga0164304_101736531	3300012986	Soil	DICLRLAAIASDEAASSRLLAIHQDYTAKADAMEAGGEAPQDAMTPPGAAQNAGKHGSGAGS*
Ga0157369_119030571	3300013105	Corn Rhizosphere	GLSLHAECRLSSPPADICLRLAAIASDEAASSRLLAIHQDYTAKADAMEAGGEAPQDAMTPPGAAQNAGKHGSGAGS*
Ga0163162_110187742	3300013306	Switchgrass Rhizosphere	CRLSSPPADICLRLAAIASDEAASSRLLAIHQDYTAKADAMDVGGEAPQDAMTPPAQNAGKHGSGAGS*
Ga0163163_101230177	3300014325	Switchgrass Rhizosphere	MPSAAYLRRQADICLRLAAIASDEAASSRLLAIHQDYTAKADAMEAGGEAPQDAMTPPGAAQ
Ga0157380_101236815	3300014326	Switchgrass Rhizosphere	LGLSLHAECRLSSPPADICLRLAAIASDEAASSRLLAIHQDYTAKADAMEAGGEAPQDAMSPPAQHRTPENTAPAR
Ga0157377_117180141	3300014745	Miscanthus Rhizosphere	MPSAAYLRRQADICLRLVAIASDEAASSRLLAIHQDYTAKADAMDVGGEAPQDAMTPPAQNAGKHGSGAGS*
Ga0157379_100440618	3300014968	Switchgrass Rhizosphere	MPSAAYLRRQADICLRLAAIASDEAASSRLLAIHRDYTAKADALEAEGDSALTPPYASPGAEKHGSGAGS*
Ga0173478_102792631	3300015201	Soil	MPSAAYLRRQADICLRLAAIASDEAASSRLLAIHQDYTAKADALEAQGDSALTPPGASPGAEKHGSGAGS*
Ga0132258_124360311	3300015371	Arabidopsis Rhizosphere	QADICLRLAAIASDESASSRLLAIHQDYTAKADAMEAGGEAPKDAMTPHGPAQNAGKHGSGAGS*
Ga0132255_1007886901	3300015374	Arabidopsis Rhizosphere	MPSAAYLRRQADICLRLAAIASDESASSRLLAIHQDYTAKADAMEAGGEAPKDAMTPHGPAQNAGKHGSGAGS*
Ga0184604_101546391	3300018000	Groundwater Sediment	MPSAAYLRRQADICLRLAAIASDEAASSRLLAIHQDYTAKADALEAEGESAMTQPDASPGTEKH
Ga0184617_11843221	3300018066	Groundwater Sediment	MPSAAYLRRQADICLRLAAIASDEAASSRLLAIHQDYTAKADAMEAGGEAPQDAMTPPGAAQNAGKHGSGA
Ga0184639_102478882	3300018082	Groundwater Sediment	MPSAAYLRRQADICLRLAAIASDEAASSRLLAIHQDYTAKADALEAEGESAMTQPDASPGTEKHGSGAGS
Ga0190270_101643872	3300018469	Soil	MPSAAYLRRQADICLRLAAIASDEAASSRLLAIHQDYTAKADALEAEGESAMTQPDASSGAEKHGSGAGS
Ga0190270_107248982	3300018469	Soil	MPSAAYLRRQADICLRLAAIASDEAASSRLLAIHQDYTAKADAMEAGGEAPQDAMTPPGAAQNAGKHGSGAVS
Ga0190274_103689961	3300018476	Soil	MPSAAYLRRQADICLRLAAIASDEAASSRLLAIHQDYTAKADAMETGGEAPQDAMTPPAAAQNAGKHGSGAGS
Ga0190271_106792591	3300018481	Soil	MPSAAYLRRQADICVRLAAIASDEAASSRLLAIHQDYTAKADAMEAGGEAPQDAMTPPGAAQNAGKHGSGAGS
Ga0184647_11845031	3300019263	Groundwater Sediment	PCMPSAAYLRRQADICLRLAAIASDEAASSRLLAIHQDYTAKADAMEAGGEAPQDAMTPPGAAQNAGKHGSGAGS
Ga0173481_105361232	3300019356	Soil	MPSAAYLRRQADICLRLAAIASDEATSSRLLAIHRDYTAKADALEAEGDSSVTQPDASPGAEK
Ga0193703_10329321	3300019876	Soil	AAYLRRQADICLRLAAIASDEAASSRLLAIHQDYTAKADALEAEGESAMTQPDASPGTEKHGSGAGS
Ga0193743_12438242	3300019889	Soil	MPSAAYLRRQADICLRLAAIASDEAASSRLLAIHQDYTAKADALEAEGESAMTQPDASPGAEKHGS
Ga0193696_11209392	3300020016	Soil	GGHWGCPCMPSAAYLRRQADICLRLAAIASDEAASSRLLAIHQDYTAKADALEAEGESAMTQPDASPGTEKHGSGAGS
Ga0193696_11270451	3300020016	Soil	RVGGHWGCPCMPSAAYLRRQADICLRLAAIASDEAASSRLLAIHQDYTAKADAMEAGGEAPQDAMTPPGAAQNAGKHGSGAGS
Ga0210380_101345763	3300021082	Groundwater Sediment	GHWGCPCMPSAAYLRRQADICLRLAAIASDEAASSRLLAIHQDYTAKADALEAEGESAMTQPDASPGTEKHGSGAGS
Ga0210380_102719942	3300021082	Groundwater Sediment	MPSAAYLRRQADICLRLAAIASDEAASSRLLAIHQDYTAKADAMEAGGEAPQDAMTPPGAAQNAGKHGSGAGS
Ga0207697_101203753	3300025315	Corn, Switchgrass And Miscanthus Rhizosphere	LGLSLHAECRLSSPPADICLRLAAIASDEAASSRLLAIHQDYTAKADAMEAGGEAPQDAMTPPGAAQNAGKHGSGAGS
Ga0207707_113213752	3300025912	Corn Rhizosphere	MPSAAYLRRQADICLRLAAIASDEAASSRLLAIHQDYTAKADAMEAGAEAPQDTMTPPGPAQNAGKHGSGAGS
Ga0207657_108011101	3300025919	Corn Rhizosphere	HAECRLSSPPADICLRLAAIASDEAASSRLLAIHQDYTAKADAMEAGGEAPQDAMTPPGAAQNAGKHGSGAGS
Ga0207649_101505281	3300025920	Corn Rhizosphere	YLRRQADICLRLAAIASDEAASSRLLAIHQDYTAKADAMEAGGEAPQDAMTPPGAAQNAGKHGSGAGS
Ga0207681_101896431	3300025923	Switchgrass Rhizosphere	LHAECRLSSPPADICLRLAAIASDEAASSRLLAIHQDYTAKADAMEAGGEAPQDAMTPPGAAQNAGKHGSGAGS
Ga0207661_109837051	3300025944	Corn Rhizosphere	LELSLHAECRLSSPPADICLRLAAIASDEAASSRLLAIHQDYTAKADAMEAGGEAPQDAMTPPGAAQNAGKHGSGAGS
Ga0207667_110447001	3300025949	Corn Rhizosphere	MPSAAYLRRQADICLRLAAIASDEAASSRLLAIHQDYTAKADAMEAGGEAPQDAMTPPGAAQNAGKHGSG
Ga0207712_102154733	3300025961	Switchgrass Rhizosphere	FFVWNVGRVSRWRPLGLSLHAECRLSSPPADICLRLAAIASDEAASSRLLAIHQDYTAKADAMEAGGEAPQDAMTPPGAAQNAGKHGSGAGS
Ga0207640_103835651	3300025981	Corn Rhizosphere	ICLRLAAIASDEAASSRLLAIHQDYTAKADAMEAGGEAPQDAMTPPGAAQNAGKHGSGAG
Ga0207703_111003831	3300026035	Switchgrass Rhizosphere	RLAAIASDEAASSRLLAIHQDYTAKADAMEAGGEAPQDAMTPPGAAQNAGKHGSGAGS
Ga0207678_105469183	3300026067	Corn Rhizosphere	AAYLRRQADICLRLAAIASDEAASSRLLAIHRDYTAKADALEAEGDSALTPPDASPGAEKHGSGAGS
Ga0207983_10051461	3300027310	Soil	ADICLRLAAIASDEAASSRLLAIHQDYTAKADAMEAGGEAPQDAMTPPGAAQNAGKHGSGAGS
Ga0209813_104000411	3300027866	Populus Endosphere	MPSVAYLRRQADICLRLAAIASDDAASSRLLAIHQDYTAKADALEAAGEAPMAQPDAAPGTEKHGSGAGS
Ga0268266_104533891	3300028379	Switchgrass Rhizosphere	WGPLELSLHAECRLSSPPADICLRLAAIASDEAASSRLLAIHQDYTAKADAMEAGGEAPQDAMTPPGAAQNAGKHGSGAGS
Ga0247821_109557932	3300028596	Soil	LGLSLHAECRLSSPPADICLRLAAIASDEAASSRLLAIHQDYTAKADAMEAGGEAPQDAMTPPGAAQNAGKHGSGASS
Ga0307321_10221701	3300028704	Soil	MPSAGYLRRQADICLRLAAIASDEAASSRLLAIHQDYTAKADAMEAGGEAPQDAMTPPGAAHAGKHGSSAGS
Ga0307322_100153091	3300028710	Soil	MPSAAYLRRQADICLRLAAIASDEAASSRLLAIHQDYTAKADALEAEGESAMTQPDASPGAEKHGSGAGS
Ga0307285_101534451	3300028712	Soil	VGGHWGCPCMPSAAYLRRQADICLRLAAIASDEAASSRLLAIHQDYTAKADAMEAGGEAPQDAMTPPGAAQNAGKHGSGAGS
Ga0307309_100261421	3300028714	Soil	MPSAAYLRRQADICLRLAAIASDEADSSRLLAIHQDYTAKADAMEAGGEAPQDAMTPPGAAHAGKHGSSAGS
Ga0307317_100199836	3300028720	Soil	MPSAAYLRRQADICLRLAAIASDEAASSRLLAIHQDYTAKADAMEAGGEAPQDAMTPPGAAHAGKHGSSAGS
Ga0307317_100587994	3300028720	Soil	YLRRQADICLRLAAIASDEAASSRLLAIHQDYTAKADALEAEGESAMTQPDASPGTEKHGSGAGS
Ga0307319_101090391	3300028722	Soil	MPSAAYLRRQADICLRLAAIASDEAASSRLLAIHQDYTAKADAMEAGGEAPQDAMTPPGAAQNAGKHGSGAV
Ga0307306_100892781	3300028782	Soil	ICLRLAAIASDEAASSRLLAIHQDYTAKADAMEAGGEAPQDAMTPPGAAHAGKHGSSAGS
Ga0307287_100637921	3300028796	Soil	ERLGGFRVGGHWGCPCMPSAAYLRRQADICLRLAAIASDEAASSRLLAIHQDYTAKADALEAEGESAMTQPDASPGTEKHGSGAGS
Ga0307292_101604083	3300028811	Soil	AAIASDEAASSRLLAIHQDYTAKADALEAEGESAMTQPDASPGTEKHGSGAGS
Ga0307296_104620802	3300028819	Soil	LAAIASDEAASSRLLAIHQDYTAKADALEAEGESAMTQPDASPGTEKHGSGAGS
Ga0307314_101731032	3300028872	Soil	VERLGGFRVGGNWGCLCMPSAAYLRRQADICLRLAAIASDEAASSRLLAIHQDYTAKADAMEAGGEAPQDAMTPPGAAQNAGKHGSGAGS
Ga0307286_102903741	3300028876	Soil	LGGFRVGGHWGCPCMPSAAYLRRQADICLRLAAIASDEAASSRLLAIHQDYTAKADAMEAGGEAPQDAMTPPGAAQNAGKHGSGAGS
Ga0308203_10212851	3300030829	Soil	CMPSAAYLRRQADICLRLAAIASDEAASSRLLAIHQDYTAKADAMEAGGEAPQDAMTPPGAAHAGKHGSSAGS
Ga0308202_10379952	3300030902	Soil	CMPSAAYLRRQADICLRLAAIASDEAASSRLLAIHQDYTAKADALEAEGESAMTQPDASPGTEKHGSGAGS
Ga0308206_10654841	3300030903	Soil	CMPSAAYLRRQADICLRLAAIASDEAASSRLLAIHQDYTAKADAMEAGGEAPQDAMTPPGAAQNAGKHGSGAGS
Ga0308178_11612211	3300030990	Soil	PSAAYLRRQADICLRLAAIASDEAASSRLLAIHQDYTAKADAMDLGGEAPQDAMTPPAQNAGKHGSGAGS
Ga0308189_101005771	3300031058	Soil	CMPSAAYLRRQADICLRLAAIASDEAASSRLLAIHQDYTAKADAMDVGGEAPQDAMTPPAQNAGKHGSGAGS
Ga0308189_104100661	3300031058	Soil	VSMPSAAYLRRQADICLRLAAIASDEAASSRLLAIHQDYTAKADAMEAGGEAPQDAMTPPGAAHAGKHGSSAGS
Ga0308201_102739871	3300031091	Soil	CMPSAAYLRRQADICLRLAAIASDEAASSRLLAIHHHYTAKADAMEAGGEAPQNAMTPSGIEQNAGKHGSGLGS
Ga0308204_101743511	3300031092	Soil	VGGCLCMPSAAYLRRQADICLRLAAIASDEAASSRLLAIHQDYTAKADAMEAGGEAPQDAMTPPGAAHAGKHGSSAGS
Ga0307501_100189081	3300031152	Soil	MPSAAYLRRQADICLRLAAIASDEAASSRLLAIHQDYTAKADAMEAGGEQDAMTPPGAAQNAGKHGSGAGS
Ga0307498_101642891	3300031170	Soil	FRVGGHWGCPRMPSAAYLRRQADICLRLAAIASDEAASSRLLAIHQDYTAKADAMEAGGEAPQDAMTPPGAAQNAGKHGSGAGS
Ga0307505_100832711	3300031455	Soil	VGGHWGCPCMSSAAYLRRQADICLRLAAIASDEAASSRLLAIHQDYTAKADAMEAGGEAPQDAMTPPGAAQNAGKHGSGAGS
Ga0310904_101638113	3300031854	Soil	DICLRLAAIASDEAASSRLLAIHQDYTAKADAMEAGGEAPQDAMTPPGAAQNAGKHGSGAGS
Ga0310892_106699422	3300031858	Soil	PLGLSLHAECRLSSPPADICLRLAAIASDEAASSRLLAIHQDYTAKADAMEAGGEAPQDAMTPPGAAQNAGKHGSGAGS
Ga0310902_105816982	3300032012	Soil	SAAYLRRQADICLRLAAIASDEAASSRLLAIHQDYTAKADAMEAGGEAPQDAMTPPGAAQNAGKHGSGAGS

Hidden Markov Model


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