Metagenome / Metatranscriptome Family F058058

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F058058
Family Type	Metagenome / Metatranscriptome
Number of Sequences	135
Average Sequence Length	68 residues
Representative Sequence	MRLFSRKKAPRDPAEPGLFQRLVMPRGRPPDPKLEEIRRAAEADVERMEAEDRKYFRQDGPGRIEDDL
Number of Associated Samples	83
Number of Associated Scaffolds	135

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	72.18 %
% of genes near scaffold ends (potentially truncated)	37.04 %
% of genes from short scaffolds (< 2000 bps)	84.44 %
Associated GOLD sequencing projects	76
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (70.370 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (35.556 % of family members)
Environment Ontology (ENVO)	Unclassified (48.889 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (57.037 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 41.18% β-sheet: 0.00% Coil/Unstructured: 58.82%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 135 Family Scaffolds
PF03007	WES_acyltransf	36.30
PF01566	Nramp	22.22
PF06974	WS_DGAT_C	7.41
PF01872	RibD_C	1.48
PF00118	Cpn60_TCP1	0.74
PF13751	DDE_Tnp_1_6	0.74
PF00107	ADH_zinc_N	0.74
PF07592	DDE_Tnp_ISAZ013	0.74
PF13459	Fer4_15	0.74
PF04542	Sigma70_r2	0.74

COG ID	Name	Functional Category	% Frequency in 135 Family Scaffolds
COG4908	Uncharacterized conserved protein, contains a NRPS condensation (elongation) domain	General function prediction only [R]	36.30
COG1914	Mn2+ or Fe2+ transporter, NRAMP family	Inorganic ion transport and metabolism [P]	22.22
COG0262	Dihydrofolate reductase	Coenzyme transport and metabolism [H]	1.48
COG1985	Pyrimidine reductase, riboflavin biosynthesis	Coenzyme transport and metabolism [H]	1.48
COG0459	Chaperonin GroEL (HSP60 family)	Posttranslational modification, protein turnover, chaperones [O]	0.74
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	0.74
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	0.74
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	0.74
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	0.74

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	70.37 %
Unclassified	root	N/A	29.63 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	70.37 %
Unclassified	root	N/A	29.63 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	70.37 %
Unclassified	root	N/A	29.63 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	64.44 %
Unclassified	root	N/A	29.63 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	64.44 %
Unclassified	root	N/A	29.63 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	30.37 %
Unclassified	root	N/A	29.63 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	29.63 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	5.93 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	3.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	29.63 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	5.93 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3.70 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459016\|G1P06HT02FU3F8	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	674	Open in IMG/M
3300000956\|JGI10216J12902_102824074	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	891	Open in IMG/M
3300000956\|JGI10216J12902_104153913	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1754	Open in IMG/M
3300004267\|Ga0066396_10018508	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	918	Open in IMG/M
3300004267\|Ga0066396_10100365	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	534	Open in IMG/M
3300004633\|Ga0066395_10065374	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1657	Open in IMG/M
3300004633\|Ga0066395_10269568	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	920	Open in IMG/M
3300005332\|Ga0066388_100076907	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3682	Open in IMG/M
3300005332\|Ga0066388_100122975	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3122	Open in IMG/M
3300005332\|Ga0066388_100226167	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2502	Open in IMG/M
3300005332\|Ga0066388_100526280	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1815	Open in IMG/M
3300005332\|Ga0066388_100674788	Not Available	1644	Open in IMG/M
3300005332\|Ga0066388_101133854	Not Available	1328	Open in IMG/M
3300005332\|Ga0066388_101645983	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1132	Open in IMG/M
3300005332\|Ga0066388_103510433	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	800	Open in IMG/M
3300005332\|Ga0066388_106180876	Not Available	604	Open in IMG/M
3300005363\|Ga0008090_15181321	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	590	Open in IMG/M
3300005363\|Ga0008090_15309210	Not Available	662	Open in IMG/M
3300005363\|Ga0008090_15807350	Not Available	1332	Open in IMG/M
3300005434\|Ga0070709_10883301	All Organisms → cellular organisms → Bacteria	706	Open in IMG/M
3300005435\|Ga0070714_100708010	Not Available	972	Open in IMG/M
3300005436\|Ga0070713_100076841	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2837	Open in IMG/M
3300005436\|Ga0070713_100941624	Not Available	832	Open in IMG/M
3300005467\|Ga0070706_100008294	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	9684	Open in IMG/M
3300005713\|Ga0066905_102194238	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	515	Open in IMG/M
3300005764\|Ga0066903_100389513	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2284	Open in IMG/M
3300005764\|Ga0066903_101132216	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1446	Open in IMG/M
3300005764\|Ga0066903_102402178	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1019	Open in IMG/M
3300005764\|Ga0066903_103186271	Not Available	887	Open in IMG/M
3300006755\|Ga0079222_10440885	Not Available	926	Open in IMG/M
3300006804\|Ga0079221_10050950	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1856	Open in IMG/M
3300006852\|Ga0075433_10089789	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2716	Open in IMG/M
3300009792\|Ga0126374_10845484	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	704	Open in IMG/M
3300009792\|Ga0126374_11886566	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	502	Open in IMG/M
3300010043\|Ga0126380_10012676	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3834	Open in IMG/M
3300010043\|Ga0126380_10306767	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1132	Open in IMG/M
3300010048\|Ga0126373_10164917	All Organisms → cellular organisms → Bacteria	2119	Open in IMG/M
3300010048\|Ga0126373_11308700	Not Available	791	Open in IMG/M
3300010048\|Ga0126373_13054362	Not Available	522	Open in IMG/M
3300010359\|Ga0126376_11447928	Not Available	713	Open in IMG/M
3300010360\|Ga0126372_11885339	Not Available	642	Open in IMG/M
3300010360\|Ga0126372_12777713	All Organisms → cellular organisms → Bacteria	542	Open in IMG/M
3300010361\|Ga0126378_10920632	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	980	Open in IMG/M
3300010361\|Ga0126378_11909723	Not Available	676	Open in IMG/M
3300010361\|Ga0126378_11915368	Not Available	675	Open in IMG/M
3300010361\|Ga0126378_12412544	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	601	Open in IMG/M
3300010366\|Ga0126379_11212581	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	861	Open in IMG/M
3300010366\|Ga0126379_13489396	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	527	Open in IMG/M
3300010366\|Ga0126379_13856492	Not Available	502	Open in IMG/M
3300010376\|Ga0126381_101507758	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	972	Open in IMG/M
3300010376\|Ga0126381_101873220	Not Available	865	Open in IMG/M
3300010398\|Ga0126383_10295402	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1615	Open in IMG/M
3300010398\|Ga0126383_10526603	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1244	Open in IMG/M
3300010398\|Ga0126383_12266813	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	629	Open in IMG/M
3300012200\|Ga0137382_10836280	Not Available	663	Open in IMG/M
3300012971\|Ga0126369_10622274	Not Available	1151	Open in IMG/M
3300015371\|Ga0132258_10925089	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2202	Open in IMG/M
3300016270\|Ga0182036_11843466	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	512	Open in IMG/M
3300016341\|Ga0182035_10079214	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2340	Open in IMG/M
3300016341\|Ga0182035_10630788	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	928	Open in IMG/M
3300016341\|Ga0182035_11930326	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	536	Open in IMG/M
3300016357\|Ga0182032_11850196	Not Available	528	Open in IMG/M
3300016357\|Ga0182032_12069561	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	500	Open in IMG/M
3300016371\|Ga0182034_11530443	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	585	Open in IMG/M
3300016387\|Ga0182040_10207365	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1445	Open in IMG/M
3300016387\|Ga0182040_11395632	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	593	Open in IMG/M
3300016422\|Ga0182039_10094007	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2194	Open in IMG/M
3300016422\|Ga0182039_10345962	Not Available	1247	Open in IMG/M
3300016445\|Ga0182038_10209462	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1540	Open in IMG/M
3300021560\|Ga0126371_10582726	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1267	Open in IMG/M
3300021560\|Ga0126371_10964622	All Organisms → cellular organisms → Bacteria	995	Open in IMG/M
3300021560\|Ga0126371_10966566	All Organisms → cellular organisms → Bacteria	994	Open in IMG/M
3300021560\|Ga0126371_11153389	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	913	Open in IMG/M
3300021560\|Ga0126371_13128129	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	560	Open in IMG/M
3300025928\|Ga0207700_10095616	All Organisms → cellular organisms → Bacteria	2357	Open in IMG/M
3300025929\|Ga0207664_11965920	Not Available	508	Open in IMG/M
3300027527\|Ga0209684_1031419	All Organisms → cellular organisms → Bacteria	813	Open in IMG/M
3300027725\|Ga0209178_1036706	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1552	Open in IMG/M
3300027874\|Ga0209465_10025413	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2756	Open in IMG/M
3300031543\|Ga0318516_10059653	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2096	Open in IMG/M
3300031543\|Ga0318516_10084084	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1780	Open in IMG/M
3300031543\|Ga0318516_10097303	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1660	Open in IMG/M
3300031543\|Ga0318516_10147901	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1349	Open in IMG/M
3300031544\|Ga0318534_10330975	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	877	Open in IMG/M
3300031544\|Ga0318534_10503946	Not Available	691	Open in IMG/M
3300031544\|Ga0318534_10598637	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	626	Open in IMG/M
3300031549\|Ga0318571_10180451	Not Available	745	Open in IMG/M
3300031549\|Ga0318571_10250011	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	651	Open in IMG/M
3300031564\|Ga0318573_10021975	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2884	Open in IMG/M
3300031564\|Ga0318573_10106452	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1444	Open in IMG/M
3300031572\|Ga0318515_10003727	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	6120	Open in IMG/M
3300031573\|Ga0310915_11073995	Not Available	560	Open in IMG/M
3300031640\|Ga0318555_10094981	All Organisms → cellular organisms → Bacteria	1566	Open in IMG/M
3300031668\|Ga0318542_10457964	Not Available	661	Open in IMG/M
3300031679\|Ga0318561_10156042	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1227	Open in IMG/M
3300031679\|Ga0318561_10787102	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	522	Open in IMG/M
3300031680\|Ga0318574_10852294	Not Available	534	Open in IMG/M
3300031681\|Ga0318572_10796086	Not Available	562	Open in IMG/M
3300031681\|Ga0318572_10985735	Not Available	500	Open in IMG/M
3300031744\|Ga0306918_10472545	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	981	Open in IMG/M
3300031744\|Ga0306918_10606271	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	858	Open in IMG/M
3300031747\|Ga0318502_10571852	Not Available	679	Open in IMG/M
3300031764\|Ga0318535_10494720	Not Available	543	Open in IMG/M
3300031765\|Ga0318554_10654842	Not Available	590	Open in IMG/M
3300031769\|Ga0318526_10077070	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1309	Open in IMG/M
3300031771\|Ga0318546_10166594	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1492	Open in IMG/M
3300031771\|Ga0318546_10823151	Not Available	653	Open in IMG/M
3300031779\|Ga0318566_10064936	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1756	Open in IMG/M
3300031779\|Ga0318566_10179496	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1050	Open in IMG/M
3300031782\|Ga0318552_10148677	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1176	Open in IMG/M
3300031797\|Ga0318550_10158488	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1089	Open in IMG/M
3300031799\|Ga0318565_10408158	Not Available	658	Open in IMG/M
3300031832\|Ga0318499_10363312	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	556	Open in IMG/M
3300031879\|Ga0306919_10090056	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2135	Open in IMG/M
3300031894\|Ga0318522_10243650	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	681	Open in IMG/M
3300031896\|Ga0318551_10610711	Not Available	629	Open in IMG/M
3300031897\|Ga0318520_10148036	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1359	Open in IMG/M
3300031910\|Ga0306923_11649946	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	664	Open in IMG/M
3300031954\|Ga0306926_10711278	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1217	Open in IMG/M
3300031954\|Ga0306926_11255153	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	867	Open in IMG/M
3300031981\|Ga0318531_10584300	Not Available	506	Open in IMG/M
3300032001\|Ga0306922_10347150	Not Available	1592	Open in IMG/M
3300032010\|Ga0318569_10008293	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3799	Open in IMG/M
3300032042\|Ga0318545_10099877	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1016	Open in IMG/M
3300032059\|Ga0318533_10371102	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1043	Open in IMG/M
3300032060\|Ga0318505_10486709	Not Available	582	Open in IMG/M
3300032063\|Ga0318504_10280587	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	787	Open in IMG/M
3300032064\|Ga0318510_10134242	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	967	Open in IMG/M
3300032065\|Ga0318513_10242687	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	872	Open in IMG/M
3300032068\|Ga0318553_10238697	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	949	Open in IMG/M
3300032089\|Ga0318525_10383689	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	720	Open in IMG/M
3300032091\|Ga0318577_10492173	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	585	Open in IMG/M
3300032094\|Ga0318540_10654780	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	506	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.78%
Host-Associated	Host-Associated	1.48%
Engineered	Engineered	0.74%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	97.78%
Plants	Host-Associated → Plants	1.48%
Solid Waste	Engineered → Solid Waste	0.74%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	97.78%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.74%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.74%
Grass	Engineered → Solid Waste → Grass	0.74%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	77.78%
Loam	Environmental → Terrestrial → Soil → Loam	20.00%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.74%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.74%
Composting	Engineered → Solid Waste → Grass → Composting	0.74%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	49.63%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	22.22%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	14.81%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.19%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.22%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	2.22%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.48%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.74%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.74%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	0.74%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	35.56%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	20.74%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	14.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	14.07%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.70%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.22%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	2.22%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.48%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.48%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.74%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.74%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	0.74%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459016	Litter degradation ZMR2	Engineered	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300004267	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 6 MoBio	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300027527	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 6 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027725	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200 (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031549	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031769	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f24	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031799	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21	Environmental	Open in IMG/M
3300031832	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f25	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031894	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032042	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f26	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032089	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
2ZMR_04665050	2170459016	Switchgrass, Maize And Mischanthus Litter	MGLFSRKKARRDPAEPGWFQRLVMPRGRAPDPKLEEIKRAVEADVERMEAEDRKYFRQDGPGYIEDDL
JGI10216J12902_1028240742	3300000956	Soil	MRLFSRKKAPRDPAGPGWFQRLVMPRGHPPDRKLEEIKRAAEADVERMEAEDRKYFRQDAPGKIEDDL*
JGI10216J12902_1041539132	3300000956	Soil	MRLFSRKKAPRDPAEPGLFQRLVQPRGRPPDPKLEEIKRAADADVQRMEAEDRKYFRQDGPGRIEDDL*
Ga0066396_100185082	3300004267	Tropical Forest Soil	MRLFTRKKRDPDEPGWFQRIVMPRGHPPDPKLEKIKRAVEEDVDRMEAEDLKYFRQDSPGNIEDDL*
Ga0066396_101003651	3300004267	Tropical Forest Soil	RGGTPKVATKEPTMGLFSRKKARRDPAEPGWFQRLVMPRGHPPDPKLEELKRAAEADVERMEAEDRKYFRQDGPGSIEDDL*
Ga0066395_100653741	3300004633	Tropical Forest Soil	MRLFSRKRAPRDPAERGWFQRLVMPRGRPPDRKLQEIRRAAEADVEEMEAEDRKYFRQDAPGKIEDDL*
Ga0066395_102695682	3300004633	Tropical Forest Soil	MRLFPRKKAPRDPAEPGLFQRLVMPRGHPPDPKLEEIRRAAEADVERMEAEDRKYFRQDGPGNSEDDL*
Ga0066388_1000769073	3300005332	Tropical Forest Soil	MRLFSRMKAPRDPAKPGWFQRLVIPRGHPPDRKLEEIRRAAEEDVERMEAEDRKYFRQDGPGKVEDDL*
Ga0066388_1001229753	3300005332	Tropical Forest Soil	MRLFSRKRAPRDPAERGLFQRLVMPRGRPPDRKLQEIRQAAEADVEEMEAEDRKYFRQDAPGKIEDDL*
Ga0066388_1002261671	3300005332	Tropical Forest Soil	MRLFSRKKAPRDPAEPGLFQRLVMPRGRPPDAKLEEIRRAAEADVEQMEAEDKYFRKDGPGMIEDDL*
Ga0066388_1005262802	3300005332	Tropical Forest Soil	MRLFSRKRAPRDPAEPGLFQRLVMPRGRPPDPKLEEIKRAAEADVERMEAEDRKYFRQDGPGKIEDDL*
Ga0066388_1006747882	3300005332	Tropical Forest Soil	MGLFSRKKARRDPAEPGWFQRLVMPRGHPPDPKLEELKRAAEADVERMEAEDRKYFRQDGPGSIEDDL*
Ga0066388_1011338542	3300005332	Tropical Forest Soil	MRLFSRKKAPRDPAGPGLFQRLVMPRGRPPDPKLEEIKRAAEADVEAMEAEDRKYFRQDAPGKIEDDL*
Ga0066388_1016459831	3300005332	Tropical Forest Soil	MGLFSRKKARRGAAEPGWFQRLVMPRGHPPDPKLEKIKRAAEEDVERMEEEDRKYFRQDAPGKIEDDL*
Ga0066388_1035104332	3300005332	Tropical Forest Soil	RDPAEPGLFQRLVQPRGRPPDPKLEEIRRAAEADVERIEAEDKYFRKDGPGMIEDDL*
Ga0066388_1061808761	3300005332	Tropical Forest Soil	MRLFSRKKAPRDPAEPGLFQRLVMPRGHPPDAKLEEIRRAADADVERMEAEDRKYFRQDGPGRIEDDL*
Ga0008090_151813212	3300005363	Tropical Rainforest Soil	TEEPTMRLFSRKKAPRDPAEPGLFQRLVMPRGHPPDPKLQEIKRAAEADVEEMEAEDRKYFRQDAPGKIEDDL*
Ga0008090_153092101	3300005363	Tropical Rainforest Soil	MRLFPRKKAPRDPAQRGLFQRLVMPRGRPPDRKLQEIRLAAEADVEEMEAEDRKYF
Ga0008090_158073502	3300005363	Tropical Rainforest Soil	MRLFSRKKAPRDPAEPGLFQRLVMPRGRPPDAKLEEIRRAADADVERMEAEDRKYFRQDGPGRIEDDL*
Ga0070709_108833012	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MKRLPRGTPKVATEEPTMRLFSRKKAPRDPAKPGWFQRLVMPRGHPPDRKLEEIRRAAEADVEQMEAEDRKYFRQDAPGKIEDDL*
Ga0070714_1007080102	3300005435	Agricultural Soil	MRLFSRKKAPRDPAEPGLFQRLVMPRGRPPDPKLEEIRRAAEADVERMEAEDRKYFRQDGPGRIEDDL*
Ga0070713_1000768413	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MRLFSRKKAPRDPAERGLFQRLVMPRGRPPDAKLEEIRRAADADVERMEAEDRKYFRQDGPGRIEDDL*
Ga0070713_1009416241	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MRLFSRKKAPRDPAKPGWFQRLVMPRGHPPDRKLEEIRRAAEADVEQMEAEDRKYFRQDAPGKIEDDL*
Ga0070706_10000829410	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MRLFSRKKAPRDPAEPGWFQRLVMPRGHPPDRKLEEIRRAAEADVEQMEAEDRKYFRQDAPGKIEDDL*
Ga0066905_1021942381	3300005713	Tropical Forest Soil	MRLFSRKRAPRDPAEPGLFQRLVMPRGHRPDPKLDEIKRAAEADVERMEAEDRKYFRQDGPGKIEDDL*
Ga0066903_1003895133	3300005764	Tropical Forest Soil	KKRDPDEPGWFQRIVMPRGHPPDPKLEKIKRAVEEDVDRMEAEDLKYFRQDSPGNIEDDL
Ga0066903_1011322162	3300005764	Tropical Forest Soil	MRLFSRKRAPRDPAEPGLFQRLVMPRGRPPDAKLEEIRRAADADVQRMEAEDRKYFRQDGPGRIEDDL*
Ga0066903_1024021782	3300005764	Tropical Forest Soil	MRLFSRKRAPRDPAERGLFQRLVMPRGRPPDRKLQEIRRAAEADVEEMEAEDRKYFRQDAPGKIEDDL*
Ga0066903_1031862713	3300005764	Tropical Forest Soil	MRLFSRKKAPRDPAEPGLFQRLVMPRGRPPDAKLEEIRRAAEEDVERMEAEDRKYFRQDG
Ga0079222_104408851	3300006755	Agricultural Soil	MRLFSRKKAPRDPDEPGLFQRLVMPRGRPPDRKLQEIRRAAEEDVEAMEAEDRKYFRQDAPGKI
Ga0079221_100509502	3300006804	Agricultural Soil	MRLFSRKKAPRDPAEPGLFQRLVQPRGHPPDRKLEEIRQAAEADVERMEAEDKYFRKDGPGMIEDDL*
Ga0075433_100897893	3300006852	Populus Rhizosphere	MRLFSRKKAPRDPAEPGLFQRLVQPRGHPPDRKLEEIRQAAEADVERMEAEDKYFR
Ga0126374_108454841	3300009792	Tropical Forest Soil	MGLFSRKKARRGAAEPGWFQRLVMPRGRPPDPKLEEIKRAAEADVEAMEAEDRKYFRQDAPGKIEDDL*
Ga0126374_118865661	3300009792	Tropical Forest Soil	NEEPTMRLFSRKKAPRDPAKPGLFQRLVMPRGRPPDAKLEEIRRAAEADVERIEAEDKYFRKDGPGMIEDDL*
Ga0126380_100126762	3300010043	Tropical Forest Soil	MRLFSRKRAPRDPAEPGLFQRLVVPRGHRPDPKLDEIKRAAEADVERMEAEDRKYFRQDGPGKIEDDL*
Ga0126380_103067672	3300010043	Tropical Forest Soil	KKAPRDPAEPGLFQRLVQPRGHPPDPKLEEIRRAAEEDVERMEAEDKYFRKDGPGMIEDDL*
Ga0126373_101649172	3300010048	Tropical Forest Soil	RLFSRKKAPRDPAEPGLFQRLVMPRGGPPDAKLEEIRRAADADVERMEAEDRKYFRQDGPGRIEDDL*
Ga0126373_113087002	3300010048	Tropical Forest Soil	MRLFSRKKAPRDPAEPGLFQRLVMPRGRPPDAKLEEIRRAADADVERMEAEDKYFRKDGPGMIEDDL*
Ga0126373_130543621	3300010048	Tropical Forest Soil	MKRLPRGTPKISTEEPTMRLFPRKKAPRDPAEPGLFQRLVMPRGHPPDPKLEEIRRAAEADVERMEAEDRKYFRQDGPGNSEDDL*
Ga0126376_114479281	3300010359	Tropical Forest Soil	MRLFSRKKAPRDPAEPGLFQRLVQPRGHPPDPKLEEIRRAAEADVERIEAEDKYFRKDGPGMIEDDL*
Ga0126372_118853392	3300010360	Tropical Forest Soil	MRLFSRKRAPRDPAKPGLFQRLVMPRGRPPDAKLEEIRRAADADVELMEAEDKYFRKDGPGMIEDDL*
Ga0126372_127777132	3300010360	Tropical Forest Soil	EPMMRLFSRKKAPRDPAGPGLFQRLVMPRGRPPDPKLEEIKRAAEADVEAMEAEDRKYFRQDAPGKIEDDL*
Ga0126378_109206322	3300010361	Tropical Forest Soil	MRLFSRKRAPRDPAERGLFQRLVMPRGRPPDRKLEEIRRAAEADVEEMEAEDRKYFRQDAPGKIEDDL*
Ga0126378_119097232	3300010361	Tropical Forest Soil	VDDEPGIAASRRTLGQAVTCRMKRLPWGTPKISTEEPTMRLFSRKKAPRDPAEPGLFQRLVMPRGRPPDAKLEEIRRAADADVERMEAEDRKYFRQDGPGRIEDDL*
Ga0126378_119153681	3300010361	Tropical Forest Soil	MGLFSRKKARRGAAEPGWFQRLVMPRGHPPDRKLEEIRRAAEADVEQIEAEDRKYFRQDGPGSNEDDL*
Ga0126378_124125441	3300010361	Tropical Forest Soil	RKKAPRDPAEPGLFQRLVMPRGHPPDPKLEEIRRAAEADVERMEAEDRKYFRQDGPGNSEDDL*
Ga0126379_112125812	3300010366	Tropical Forest Soil	MKRLPRGTPKISTEEPTMRLFSRKKAPRDPAEPGLFQRLVMPRGRPPDAKLEEIRRAAEADVEQMEAEDKYFRKDGPGMIEDDL*
Ga0126379_134893962	3300010366	Tropical Forest Soil	MKRRPRGTPRIATEEPTMRLFSRKNAPRDPAGPGWFQRLVMPRGHPPDRKLEEIRRAAEADVERMEAEDRKYFRQDGPG
Ga0126379_138564922	3300010366	Tropical Forest Soil	MMRLFSRKKAPRDPAGPGLFQRLVMPRGRPPDPKLQEIKRAAEADVEEMEAEDRKYFRQDAPGKIE
Ga0126381_1015077582	3300010376	Tropical Forest Soil	MRLFSRKKAPRDPAEPGLFQRLVQPRGHPDPKLEEIRRAAEADVERIEAEDKYFRKDGPGMIEDDL*
Ga0126381_1018732201	3300010376	Tropical Forest Soil	MPLFSRKKAPRDPDEPGLFQRLVMPRGHPPSRKLEEIKRAADADVEQIEAEDKYFRKDGPGMIEDDL*
Ga0126383_102954022	3300010398	Tropical Forest Soil	MGLFSRKKARRGAAEPGWFQRLVMPRGHPPDPKLEKIKRAAEEDVERMEEEDRKYFRQNAPGKIEDDL*
Ga0126383_105266032	3300010398	Tropical Forest Soil	MGLFSRKRAPRDPAERGLFQRLVMPRGRPPDRKLEEIRRAAEADVEEMEAEDRKYFRQDAPGKIEDDL*
Ga0126383_122668131	3300010398	Tropical Forest Soil	MRLFSRKKAPPDPAKPGLFQRLVMPRGHPPSRKLEEIKRAADADVEQIEAEDKYFRKDGPGMIEDDL*
Ga0137382_108362802	3300012200	Vadose Zone Soil	MRLFSRKKAPRDPAKPGWFQRLVMPRGHPPDRKLEEIRQAAEADVERMEAEDKYFRKDGPGMIEDDL*
Ga0126369_106222742	3300012971	Tropical Forest Soil	MRLFSRKKAPRDPAEPGLFQRLVMPRGRPPDAKLEEIRRAAEADVEQMAAEDKYFRKDGPGMIEDDL*
Ga0132258_109250892	3300015371	Arabidopsis Rhizosphere	MRLFSRKKAPGDPAAPGLFQRLVMPRGRPPDPKLEEIRRAAEADVDRMEAEDRKYFRQDGPGRIEDDL*
Ga0182036_118434661	3300016270	Soil	AGELAKVATEEPTMRLFSRKKAPRDPAEPGLFQRLVMPRGHPPDQKLQEIRRAAEADVAEMEAEDRKYFRQDAPGKIEDDL
Ga0182035_100792141	3300016341	Soil	MRLFSRKKAPRDPAEPGLFQRLVMPRGHPPDRKLQEIRRAAEADVEEMEAEDRKYFRQDGPGKIEDDL
Ga0182035_106307882	3300016341	Soil	MRLFSRKKARRDPAEPGLFQRLVMPRGHPPDRKLEEIRRAAEEDVERIEAEDRKYFRPDGPGSVEDDL
Ga0182035_119303262	3300016341	Soil	AKVATEEPTMRLFSRKKAPRDPAEPGLFQRLVMPRGHPPDQKLQEIRRAAEADVAEMEAEDRKYFRQDAPGKIEDDL
Ga0182032_118501961	3300016357	Soil	MRLFSRKRAPRDPAERGLFQRLVMPRGHPPDQKLQEIRRAAEADVAEMEAEDRKYFRQDAPGKIEDDL
Ga0182032_120695611	3300016357	Soil	MPLFSRKKAPRDPAEPGLFQRLVMPRGRPPDAKLEEIRRAADADVARMEAEDRKYFRQDGPGRIEDDL
Ga0182034_115304431	3300016371	Soil	EEPTMGLFSRKKTRRDPGGPGLFQRLVMPRGHGPDPKLDEIKQAAEADVERMEAEDREYFRQDAPGKIEDDL
Ga0182040_102073652	3300016387	Soil	MRLFSRKRAPRDPAERGLFQRLVMPRGRPPDRKLEEIRRAAEADVEEMEAEDRKYFRKDGPGMIEDDL
Ga0182040_113956322	3300016387	Soil	TMPLFSRKKAPRDPDEPGLFQRLVMPRGHPPSRKLEEIKRAADADVEQMEAEDKYFRKDGPGMIEDDL
Ga0182039_100940071	3300016422	Soil	HGGTPKISNEEPTMRLFSRKRAPRDPAKPGLFQRLVMPRGRPPDAKLEEIRRAADADVERMEAEDKYFRKDGPGMIEDDL
Ga0182039_103459622	3300016422	Soil	MRLFSRKKAPRDPAEPGLFQRLVMPRGRPPDAKLEEIRRAADADVKRMEAEDRKYFRQDGPGRIEDDL
Ga0182038_102094622	3300016445	Soil	MRLFSRKKAPRDPAEPGLFQRLVMPRGRPPDAKLEEIRRAADADVARMEAEDRKYFRQDGPGMIEDDL
Ga0210402_112832982	3300021478	Soil	MGLFSRFRERRNSGGPSLFQRLVMPRGHPPSPELEEIQRAAAEDVAAMEAEDRKYFRQDGPGDIEDDL
Ga0126371_105827262	3300021560	Tropical Forest Soil	MRLFSRKRAPRDPAERGLFQRLVMPRGRPPDRKLQEIRRAAEADVEEMEAEDRKYFRQDAPGKIEDDL
Ga0126371_109646222	3300021560	Tropical Forest Soil	MRLFSRKRAPRDPAEPGLFQRLVMPRGHPPDPKLEEVRRAAEADVERMEAEDRKYFRQDGPGNSEDDL
Ga0126371_109665662	3300021560	Tropical Forest Soil	MPLFSRKKAPRDPDEPGLFQRLVMPRGHPPSRKLEEIKRAADADVEQIEAEDKYFRKDGPGMIEDDL
Ga0126371_111533891	3300021560	Tropical Forest Soil	MGLFSRKKARRGAAEPGWFQRLVMPRGHPPDPKLEKIKRAAEEDVERMEEEDRKYFRQDAPGKIEDDL
Ga0126371_131281291	3300021560	Tropical Forest Soil	EEPTMRLFSRKKAPRDPAEPGLFQRLVMPRGHPPDRKLEEIRRAADADVERMEAEDRKYFRQDGPGRIEDDL
Ga0207700_100956163	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	RKKAPRDPAERGLFQRLVMPRGRPPDAKLEEIRRAADADVERMEAEDRKYFRQDGPGRIEDDL
Ga0207664_119659201	3300025929	Agricultural Soil	MRLFSRKKAPRDPAEPGLFQRLVMPRGRPPDPKLEEIRRAAEADVERMEAEDRKYFRQDGPGRIEDDL
Ga0209684_10314192	3300027527	Tropical Forest Soil	MGLFSRKKARRDPAEPGWFQRLVMPRGHPPDPKLEELKRAAEADVERMEAEDRKYFRQDGPGSIEDDL
Ga0209178_10367062	3300027725	Agricultural Soil	MRLFSRKKAPRDPAEPGLFQRLVQPRGHPPDRKLEEIRQAAEADVERMEAEDKYFRKDGPGMIEDDL
Ga0209465_100254133	3300027874	Tropical Forest Soil	MRLFSRKKAPRDPAEPGLFQRLVMPRGRPPDAKLEEIRRAADADVQRMEAEDRKYFRQDGPGNSEDDL
Ga0209590_108758761	3300027882	Vadose Zone Soil	MGIFSRFRERRQSGGPGLFQRLVMPRGHPPDPKLEEIQRAAAEDVAAMEAEDRKYFRQDGPGNNEDDL
Ga0318516_100596532	3300031543	Soil	MRLFSRKRAPRDPAERGLFQRLVMPRGRPPDRKLEEIRRAAEADVEEMEAEDRKYFRQDAPGKIEDDL
Ga0318516_100840842	3300031543	Soil	MRLFSRKKTPRDPAKPGLFQRLVMPRGRPPDAKLEEIRRAADADVERMEAEDKYFRKDGPGMIEDDL
Ga0318516_100973031	3300031543	Soil	SRKKAPRDPAEPGLFQRLVMPRGHPPDQKLQEIRRAAEADVAEMEAEDRKYFRQDAPGKIEDDL
Ga0318516_101479012	3300031543	Soil	MGLFSRKKTRRDPGGPGLFQRLVMPRGHGPDPKLDEIKQAAEADVERMEAEDREYFRQDAPGKIEDDL
Ga0318534_103309752	3300031544	Soil	MRLFSRKKAPRDPAEPGLFQRLVMPRGHPPDQKLQEIRRAAEADVAEMEAEDRKYFRQDAPGKIEDDL
Ga0318534_105039462	3300031544	Soil	MRLFSRKRAPRDPAKPGLFQRLVMPRGRPPDAKLEEIRRAADADVERMEAEDKYFRKDGPGMIEDDL
Ga0318534_105986371	3300031544	Soil	KKAPRDPAGPGLFQRLVMPRGHPPDQKLQEIRRAAEADVAEMEAEDRKYFRQDAPGKIEDDL
Ga0318571_101804511	3300031549	Soil	MGLFSRKKTRRDPDGPGLFQRLVMPRGHGPDPKLDEIKQAAEADVERMEAEDREYFRQDAPGKIEDDL
Ga0318571_102500112	3300031549	Soil	RKKAPRDPAGPGLFQRLVMPRGHPPDQKLQEIRRAAEADVAEMEAEDRKYFRQDAPGKIEDDL
Ga0318573_100219753	3300031564	Soil	MRLFSRKKAPRDPAKPGLFQRLVMPRGRPPDAKLEEIRRAADADVERMEAEDKYFRKDGPGMIEDDL
Ga0318573_101064522	3300031564	Soil	MRLFSRKKAPRDPAGPGLFQRLVMPRGHPPDQKLQEIRRAAEADVAEMEAEDRKYFRQDAPGKIEDDL
Ga0318515_100037271	3300031572	Soil	AGELAKVATEEPTMRLFSRKRAPRDPAERGLFQRLVMPRGRPPDRKLEEIRRAAEADVEEMEAEDRKYFRQDAPGKIEDDL
Ga0310915_110739951	3300031573	Soil	MRLFSRKKAPRDPAEPGLFQRLVMPRGRPPDAKLEEIRRAADADVERMEAEDRKYFRQDGPGRIEDDL
Ga0318555_100949812	3300031640	Soil	MRLFSRKKARRDPAEPGLFQRLVMPRGHPPDRKLEEIRRAAEEDVERIEAEDRKYFRPDGPASVEDDL
Ga0318542_104579641	3300031668	Soil	MRLFSRKKTPRDPAKPGLFQRLVMPRGRPPDAKLEEIRRAADADVERMEAEDKYFRKDGP
Ga0318561_101560422	3300031679	Soil	MRLFSRKKAPRDPAEPGLFQRLVVPRGRPPDAKLEEIRRAADADVERMEAEDRKYFRQDGPGRIEDDL
Ga0318561_107871021	3300031679	Soil	RVPAAGRPHETAATGELAKVATEEPTMRLFSRKKAPRDPAEPGLFQRLVMPRGHPPDQKLQEIRRAAEADVAEMEAEDRKYFRQDAPGKIEDDL
Ga0318574_108522941	3300031680	Soil	MRLFSRKKAPRDPAEPGLFQRLVMPRGHPPSRKLEEIKRAADADVEQMEAEDKYFRKDGPGMIEDDL
Ga0318572_107960861	3300031681	Soil	MRLFSRTKAPRDPAEPGLFQRLVMPRGHPPDRKLEEIRRAAEEDVERIEAEDRKYFRPDGPGSVEDDL
Ga0318572_109857351	3300031681	Soil	VAPVRVPATGRPHETAATGELAKVATEEPTMRLFSRKKAPRDPAEPGLFQRLVMPRGHPPDQKLQEIRRAAEADVAEMEAEDRKYFRQDAPGKIEDDL
Ga0306918_104725452	3300031744	Soil	MRLFSRKKAPRDPAEPGLFQRLVMPRGHPPDRKLEEIRRAAEEDVERIEAEDRKYFRPDGPGSVEDDL
Ga0306918_106062711	3300031744	Soil	MRLFSRKRAPRDPAERGLFQRLVMPRGRPPDRKLEEIRRAAEADVEEMEAEDRKYFRQD
Ga0318502_105718521	3300031747	Soil	MRLFSRKKAPRDPAGPGLFQRLVMPRGHPPDQKLQEIRRAAEADVAEMEAEDRKYFRQDAPG
Ga0318535_104947201	3300031764	Soil	MRLFSRKKAPRDPAEPGLFQRLVMPRGHPPDQKLQEIRRAAEADVAEMEAEDRKYF
Ga0318554_106548421	3300031765	Soil	MPLFSRKKAPRDPDEPGLFQRLVMPRGHPPSRKLEEIKRAADADVEQMEAEDKYFRKDGPGMIEDDL
Ga0318526_100770702	3300031769	Soil	RLFSRKRAPRDPAKPGLFQRLVMPRGRPPDAKLEEIRRAADADVERMEAEDKYFRKDGPGMIEDDL
Ga0318546_101665942	3300031771	Soil	RKKAPRDPAKPGLFQRLVMPRGRPPDAKLEEIRRAADADVERMEAEDKYFRKDGPGMIEDDL
Ga0318546_108231511	3300031771	Soil	MRLFSRKKAPRDPAEPGLFQRLVMPRGHPPDQKLQEIRRAAEADVAEMEAEDRKYFRQD
Ga0318566_100649361	3300031779	Soil	EPTMRLFSRKKARRDPAEPGLFQRLVMPRGHPPDRKLEEIRRAAEEDVERIEAEDRKYFRPDGPGSVEDDL
Ga0318566_101794962	3300031779	Soil	DPAERGLFQRLVMPRGRPPDRKLEEIRRAAEADVEEMEAEDRKYFRQDAPGKIEDDL
Ga0318552_101486771	3300031782	Soil	TMRLFSRKKAPRDPAEPGLFQRLVMPRGHPPDRKLEEIRRAAEEDVERIEAEDRKYFRPDGPGSVEDDL
Ga0318550_101584881	3300031797	Soil	MRLFSRKRAPRDPAERGLFQRLVMPRGRPPDRKLEEIRRAAEADVEEMEAEDRKYFRQDGPGKIEDDL
Ga0318565_104081581	3300031799	Soil	MRLFSRKKAPRDPAEPGLFQRLVMPRGRPPDAKLEEIRRAAEEDVERMEAEDRKYFRQDGPGRIEDDL
Ga0318499_103633122	3300031832	Soil	MRLFSRKKGPRDPAGPGLFQRLVMPRGHPPDRKLEEIRRAAEEDVERIEAEDRKYFRPDGPASVEDDL
Ga0306919_100900562	3300031879	Soil	MRLFSRKKAPRDPAEPGLFQRLVMPRGRPPDAKLEEIRRAADADVARMEAEDRKYFRQDGPGRIEDDL
Ga0318522_102436502	3300031894	Soil	RLFSRKRAPRDPAERGLFQRLVMPRGRPPDRKLEEIRRAAEADVEEMEAEDRKYFRQDAPGKIEDDL
Ga0318551_106107111	3300031896	Soil	MGLFSRKKTRRDPGGPGLFQRLVMPRGHGPDPKLDEIKQAAEADVERMEAEDREYFRQDAPGK
Ga0318520_101480362	3300031897	Soil	MRLFSRKKAPRDPAEPGLFQRLVMPRGHPPDRKLQEIRRAAEADVEEMEAEDRKYFRQDAPGKIEDDL
Ga0306923_116499462	3300031910	Soil	APRDPAEPGLFQRLVMPRGRPPDAKLEEIRRAADADVARMEAEDRKYFRQDGPGRIEDDL
Ga0306926_107112781	3300031954	Soil	NACHGGTPKISNEEPTMRLFSRKKTPRDPAKPGLFQRLVMPRGRPPDAKLEEIRRAADADVERMEAEDKYFRKDGPGMIEDDL
Ga0306926_112551531	3300031954	Soil	APRDPAEPGLFQRLVMPRGHPPDQKLQEIRRAAEADVAEMEAEDRKYFRQDAPGKIEDDL
Ga0318531_105843001	3300031981	Soil	MRLFSRKKAPRDPAGPGLFQRLVMPRGHPPDQKLQEIRRAAEADVAEMEAEDRKYFRQDAPGKIED
Ga0306922_103471502	3300032001	Soil	MRLFSRKKAPRDPAEPGLFQRLVMPRGRPPDAKLEEIRRAADADVARMEAEDRKYF
Ga0318569_100082934	3300032010	Soil	MRLFSRKKAPRDPARPGLFQRLVMPRGHPPDRKLEEIRRAAEADVEEMEAEDRKYFRQDAPGKIEDDL
Ga0318545_100998772	3300032042	Soil	VATEEPTMRLFSRKKAPRDPAEPGLFQRLVMPRGHPPDQKLQEIRRAAEADVAEMEAEDRKYFRQDAPGKIEDDL
Ga0318533_103711021	3300032059	Soil	TMRLFSRKRAPRDPAERGLFQRLVMPRGRPPDRKLEEIRRAAEADVEEMEAEDRKYFRQDAPGKIEDDL
Ga0318505_104867091	3300032060	Soil	MRLFSRKKAPRDPAGPGLFQRLVMPRGHPPDQKLQEIRRAAEADVAEMEAEDRKYFRQDAPGKIEDD
Ga0318504_102805872	3300032063	Soil	MRLFSRKKAPRDPAEPGLFQRLVMPRGHPPDQKLQEIRRAAEADVAEMEAEDRKYFRQDAPGKIEDD
Ga0318510_101342421	3300032064	Soil	MRLFSRKKARRDPAEPGLFHRLVMPRGHPPDRKLEEIRRAAEEDVERIEAEDRKYFRPDGPASVEDDL
Ga0318513_102426872	3300032065	Soil	GLFSRKKTRRDPGGPGLFQRLVMPRGHGPDPKLDEIKQAAEADVERMEAEDREYFRKDAPGKIEDDL
Ga0318553_102386972	3300032068	Soil	MRLFSRKKAPRDPARPGLFQRLVMPRGHPPDQKLEEIRRAAEADVEEMEAEDRKYFRQDGPGKIEDDL
Ga0318525_103836891	3300032089	Soil	MRLFSRKKAPRDPARPGLFQRLVMPRGHPPDRKLEEIRRAAEADVEEMEAEDRKYFRQDGPGKIEDDL
Ga0318577_104921731	3300032091	Soil	MRLFSRKKARRDPAEPGLFQRLVMPRGHPPDRKLQEIRRAAEADVEEMEAEDRKYFRQDAPGKIEDDL
Ga0318540_106547802	3300032094	Soil	MRLFSRKKAPRDPAEPGLFQRLVMPRGHPPDRKLQEIRRAAEADVAEMEAEDRKYFRQDAPGKIEDDL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F058058

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences