NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F058053

Metagenome / Metatranscriptome Family F058053

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F058053
Family Type Metagenome / Metatranscriptome
Number of Sequences 135
Average Sequence Length 46 residues
Representative Sequence LFLYTPAGAGGFFEEQLGRPAGSANGPEANEMRRRHGWEIVGPPPF
Number of Associated Samples 105
Number of Associated Scaffolds 135

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 2.96 %
% of genes near scaffold ends (potentially truncated) 91.11 %
% of genes from short scaffolds (< 2000 bps) 82.96 %
Associated GOLD sequencing projects 103
AlphaFold2 3D model prediction Yes
3D model pTM-score0.42

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (74.074 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil
(42.222 % of family members)
Environment Ontology (ENVO) Unclassified
(40.000 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(42.963 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Fibrous Signal Peptide: No Secondary Structure distribution: α-helix: 17.57%    β-sheet: 13.51%    Coil/Unstructured: 68.92%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.42
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 135 Family Scaffolds
PF01965DJ-1_PfpI 11.85
PF00106adh_short 6.67
PF00083Sugar_tr 5.93
PF01717Meth_synt_2 4.44
PF01266DAO 4.44
PF02321OEP 3.70
PF13278Obsolete Pfam Family 2.22
PF05199GMC_oxred_C 2.22
PF02627CMD 1.48
PF00732GMC_oxred_N 1.48
PF00999Na_H_Exchanger 1.48
PF11716MDMPI_N 1.48
PF07883Cupin_2 1.48
PF01230HIT 1.48
PF08221HTH_9 0.74
PF00496SBP_bac_5 0.74
PF13248zf-ribbon_3 0.74
PF13488Gly-zipper_Omp 0.74
PF01569PAP2 0.74
PF069833-dmu-9_3-mt 0.74
PF07992Pyr_redox_2 0.74
PF13701DDE_Tnp_1_4 0.74
PF12536DUF3734 0.74
PF00436SSB 0.74
PF01594AI-2E_transport 0.74
PF12419DUF3670 0.74
PF02417Chromate_transp 0.74
PF13560HTH_31 0.74
PF03070TENA_THI-4 0.74
PF13358DDE_3 0.74
PF07690MFS_1 0.74
PF01425Amidase 0.74

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 135 Family Scaffolds
COG1538Outer membrane protein TolCCell wall/membrane/envelope biogenesis [M] 7.41
COG0620Methionine synthase II (cobalamin-independent)Amino acid transport and metabolism [E] 4.44
COG2303Choline dehydrogenase or related flavoproteinLipid transport and metabolism [I] 3.70
COG0025NhaP-type Na+/H+ or K+/H+ antiporterInorganic ion transport and metabolism [P] 1.48
COG0475Kef-type K+ transport system, membrane component KefBInorganic ion transport and metabolism [P] 1.48
COG0599Uncharacterized conserved protein YurZ, alkylhydroperoxidase/carboxymuconolactone decarboxylase familyGeneral function prediction only [R] 1.48
COG2128Alkylhydroperoxidase family enzyme, contains CxxC motifInorganic ion transport and metabolism [P] 1.48
COG3004Na+/H+ antiporter NhaAEnergy production and conversion [C] 1.48
COG3263NhaP-type Na+/H+ and K+/H+ antiporter with C-terminal TrkAC and CorC domainsEnergy production and conversion [C] 1.48
COG4651Predicted Kef-type K+ transport protein, K+/H+ antiporter domainInorganic ion transport and metabolism [P] 1.48
COG0154Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidaseTranslation, ribosomal structure and biogenesis [J] 0.74
COG0628Predicted PurR-regulated permease PerMGeneral function prediction only [R] 0.74
COG0629Single-stranded DNA-binding proteinReplication, recombination and repair [L] 0.74
COG2059Chromate transport protein ChrAInorganic ion transport and metabolism [P] 0.74
COG2764Zn-dependent glyoxalase, PhnB familyEnergy production and conversion [C] 0.74
COG2965Primosomal replication protein NReplication, recombination and repair [L] 0.74
COG3865Glyoxalase superfamily enzyme, possible 3-demethylubiquinone-9 3-methyltransferaseGeneral function prediction only [R] 0.74

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms74.07 %
UnclassifiedrootN/A25.93 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300001867|JGI12627J18819_10085870All Organisms → cellular organisms → Bacteria → Proteobacteria1305Open in IMG/M
3300003505|JGIcombinedJ51221_10132521All Organisms → cellular organisms → Bacteria → Proteobacteria1003Open in IMG/M
3300004091|Ga0062387_101030349All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017633Open in IMG/M
3300005187|Ga0066675_11439071All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium504Open in IMG/M
3300005406|Ga0070703_10015092All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira → Nitrospira sp.2208Open in IMG/M
3300005435|Ga0070714_100418290All Organisms → cellular organisms → Bacteria → Proteobacteria1269Open in IMG/M
3300005439|Ga0070711_100971497All Organisms → cellular organisms → Bacteria728Open in IMG/M
3300005467|Ga0070706_100025123All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria5485Open in IMG/M
3300005467|Ga0070706_100563265All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1060Open in IMG/M
3300005764|Ga0066903_102713516All Organisms → cellular organisms → Bacteria → Proteobacteria961Open in IMG/M
3300006755|Ga0079222_10869988All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017750Open in IMG/M
3300006800|Ga0066660_11516958Not Available528Open in IMG/M
3300006854|Ga0075425_100926859All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017995Open in IMG/M
3300007788|Ga0099795_10358711Not Available654Open in IMG/M
3300009088|Ga0099830_10725868All Organisms → cellular organisms → Bacteria818Open in IMG/M
3300009089|Ga0099828_10347484All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1336Open in IMG/M
3300009143|Ga0099792_10404439Not Available836Open in IMG/M
3300010046|Ga0126384_10952694All Organisms → cellular organisms → Bacteria → Proteobacteria778Open in IMG/M
3300010359|Ga0126376_10828247All Organisms → cellular organisms → Bacteria → Proteobacteria907Open in IMG/M
3300010359|Ga0126376_12092897All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria609Open in IMG/M
3300010361|Ga0126378_10233960All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae1926Open in IMG/M
3300010361|Ga0126378_11445325All Organisms → cellular organisms → Bacteria779Open in IMG/M
3300010361|Ga0126378_11759000All Organisms → cellular organisms → Bacteria → Proteobacteria705Open in IMG/M
3300010361|Ga0126378_12212009Not Available627Open in IMG/M
3300010376|Ga0126381_102700321All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria710Open in IMG/M
3300010376|Ga0126381_104292836All Organisms → cellular organisms → Bacteria552Open in IMG/M
3300011269|Ga0137392_10045818All Organisms → cellular organisms → Bacteria3267Open in IMG/M
3300011269|Ga0137392_10524809All Organisms → cellular organisms → Bacteria983Open in IMG/M
3300011270|Ga0137391_10072405All Organisms → cellular organisms → Bacteria2964Open in IMG/M
3300011271|Ga0137393_11486521All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium567Open in IMG/M
3300012096|Ga0137389_10540135Not Available1001Open in IMG/M
3300012198|Ga0137364_10690517All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium770Open in IMG/M
3300012205|Ga0137362_10659241All Organisms → cellular organisms → Bacteria901Open in IMG/M
3300012208|Ga0137376_10661897Not Available902Open in IMG/M
3300012359|Ga0137385_11582311All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium519Open in IMG/M
3300012971|Ga0126369_10686573All Organisms → cellular organisms → Bacteria1100Open in IMG/M
3300012971|Ga0126369_11067120Not Available896Open in IMG/M
3300012971|Ga0126369_11583609All Organisms → cellular organisms → Bacteria → Proteobacteria745Open in IMG/M
3300012989|Ga0164305_11909901All Organisms → cellular organisms → Bacteria → Terrabacteria group539Open in IMG/M
3300016270|Ga0182036_10143940All Organisms → cellular organisms → Bacteria1688Open in IMG/M
3300016294|Ga0182041_12018153All Organisms → cellular organisms → Bacteria537Open in IMG/M
3300016319|Ga0182033_10432001All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1119Open in IMG/M
3300016319|Ga0182033_10949090All Organisms → cellular organisms → Bacteria → Proteobacteria763Open in IMG/M
3300016404|Ga0182037_11066233Not Available706Open in IMG/M
3300016404|Ga0182037_11970283All Organisms → cellular organisms → Bacteria524Open in IMG/M
3300016422|Ga0182039_10213067All Organisms → cellular organisms → Bacteria → Proteobacteria1549Open in IMG/M
3300016445|Ga0182038_10518774All Organisms → cellular organisms → Bacteria1019Open in IMG/M
3300016445|Ga0182038_11667322Not Available574Open in IMG/M
3300017970|Ga0187783_10539380Not Available845Open in IMG/M
3300017973|Ga0187780_10570820All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria811Open in IMG/M
3300020579|Ga0210407_10131506All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1919Open in IMG/M
3300020579|Ga0210407_11222141All Organisms → cellular organisms → Bacteria564Open in IMG/M
3300020581|Ga0210399_10065502All Organisms → cellular organisms → Bacteria2936Open in IMG/M
3300020581|Ga0210399_10768540All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Caulobacter → unclassified Caulobacter → Caulobacter sp. S45788Open in IMG/M
3300020582|Ga0210395_10494135All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Caulobacter → unclassified Caulobacter → Caulobacter sp. S45921Open in IMG/M
3300020583|Ga0210401_10982232All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Caulobacter → unclassified Caulobacter → Caulobacter sp. S45703Open in IMG/M
3300021088|Ga0210404_10587718All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Caulobacter → unclassified Caulobacter → Caulobacter sp. S45632Open in IMG/M
3300021168|Ga0210406_10170745All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1817Open in IMG/M
3300021170|Ga0210400_10708760All Organisms → cellular organisms → Bacteria827Open in IMG/M
3300021180|Ga0210396_10588326All Organisms → cellular organisms → Bacteria → Proteobacteria968Open in IMG/M
3300021377|Ga0213874_10352376All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria564Open in IMG/M
3300021407|Ga0210383_11155467Not Available652Open in IMG/M
3300021432|Ga0210384_10157118All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales2041Open in IMG/M
3300021476|Ga0187846_10001948All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria11469Open in IMG/M
3300021476|Ga0187846_10016664All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium3453Open in IMG/M
3300021477|Ga0210398_10244808All Organisms → cellular organisms → Bacteria → Proteobacteria1461Open in IMG/M
3300021479|Ga0210410_10900865Not Available771Open in IMG/M
3300021479|Ga0210410_10951755All Organisms → cellular organisms → Bacteria747Open in IMG/M
3300021560|Ga0126371_11697290All Organisms → cellular organisms → Bacteria → Proteobacteria755Open in IMG/M
3300021560|Ga0126371_12392187Not Available639Open in IMG/M
3300021560|Ga0126371_12511556Not Available624Open in IMG/M
3300022533|Ga0242662_10050625Not Available1072Open in IMG/M
3300025913|Ga0207695_10222546All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales1794Open in IMG/M
3300025915|Ga0207693_10013096All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales6692Open in IMG/M
3300025915|Ga0207693_10880456All Organisms → cellular organisms → Bacteria688Open in IMG/M
3300025922|Ga0207646_10683455All Organisms → cellular organisms → Bacteria918Open in IMG/M
3300027874|Ga0209465_10034776All Organisms → cellular organisms → Bacteria → Proteobacteria2382Open in IMG/M
3300027875|Ga0209283_10141971All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria1590Open in IMG/M
3300027884|Ga0209275_10065331All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1788Open in IMG/M
3300027894|Ga0209068_10790929All Organisms → cellular organisms → Bacteria558Open in IMG/M
3300027915|Ga0209069_10956675All Organisms → cellular organisms → Bacteria522Open in IMG/M
3300027986|Ga0209168_10270896Not Available838Open in IMG/M
3300031234|Ga0302325_10906281Not Available1222Open in IMG/M
3300031236|Ga0302324_102265318Not Available671Open in IMG/M
3300031545|Ga0318541_10088699All Organisms → cellular organisms → Bacteria1646Open in IMG/M
3300031545|Ga0318541_10116568All Organisms → cellular organisms → Bacteria1447Open in IMG/M
3300031561|Ga0318528_10013958All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium3717Open in IMG/M
3300031573|Ga0310915_10233598All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1292Open in IMG/M
3300031573|Ga0310915_10708862Not Available710Open in IMG/M
3300031668|Ga0318542_10102481All Organisms → cellular organisms → Bacteria1383Open in IMG/M
3300031679|Ga0318561_10009942All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales4106Open in IMG/M
3300031680|Ga0318574_10151413All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1317Open in IMG/M
3300031680|Ga0318574_10625149Not Available631Open in IMG/M
3300031708|Ga0310686_114106003All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria3501Open in IMG/M
3300031713|Ga0318496_10818759Not Available513Open in IMG/M
3300031720|Ga0307469_11979416Not Available565Open in IMG/M
3300031724|Ga0318500_10653498Not Available534Open in IMG/M
3300031751|Ga0318494_10897504Not Available520Open in IMG/M
3300031754|Ga0307475_11195751All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria592Open in IMG/M
3300031768|Ga0318509_10055311All Organisms → cellular organisms → Bacteria2035Open in IMG/M
3300031769|Ga0318526_10285643All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria675Open in IMG/M
3300031770|Ga0318521_10745880Not Available595Open in IMG/M
3300031782|Ga0318552_10081826All Organisms → cellular organisms → Bacteria1575Open in IMG/M
3300031782|Ga0318552_10351610Not Available750Open in IMG/M
3300031793|Ga0318548_10232824Not Available905Open in IMG/M
3300031795|Ga0318557_10024032All Organisms → cellular organisms → Bacteria → Proteobacteria2408Open in IMG/M
3300031795|Ga0318557_10192304All Organisms → cellular organisms → Bacteria930Open in IMG/M
3300031796|Ga0318576_10284684Not Available780Open in IMG/M
3300031796|Ga0318576_10479135All Organisms → cellular organisms → Bacteria587Open in IMG/M
3300031796|Ga0318576_10500065All Organisms → cellular organisms → Bacteria573Open in IMG/M
3300031821|Ga0318567_10520995Not Available675Open in IMG/M
3300031833|Ga0310917_10561134All Organisms → cellular organisms → Bacteria → Proteobacteria776Open in IMG/M
3300031859|Ga0318527_10014396All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium2697Open in IMG/M
3300031859|Ga0318527_10044761All Organisms → cellular organisms → Bacteria1706Open in IMG/M
3300031879|Ga0306919_10551332All Organisms → cellular organisms → Bacteria889Open in IMG/M
3300031890|Ga0306925_10196926All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium2172Open in IMG/M
3300031893|Ga0318536_10480711Not Available625Open in IMG/M
3300031893|Ga0318536_10495453Not Available614Open in IMG/M
3300031941|Ga0310912_10081534All Organisms → cellular organisms → Bacteria2350Open in IMG/M
3300031942|Ga0310916_10320025All Organisms → cellular organisms → Bacteria → Proteobacteria1315Open in IMG/M
3300031945|Ga0310913_10536551Not Available830Open in IMG/M
3300031945|Ga0310913_11277942All Organisms → cellular organisms → Bacteria509Open in IMG/M
3300032001|Ga0306922_10204400All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2120Open in IMG/M
3300032001|Ga0306922_11121049All Organisms → cellular organisms → Bacteria → Proteobacteria805Open in IMG/M
3300032035|Ga0310911_10034376All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium2553Open in IMG/M
3300032039|Ga0318559_10020408All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium2530Open in IMG/M
3300032055|Ga0318575_10372679All Organisms → cellular organisms → Bacteria → Proteobacteria724Open in IMG/M
3300032059|Ga0318533_11172226Not Available562Open in IMG/M
3300032065|Ga0318513_10185987All Organisms → cellular organisms → Bacteria998Open in IMG/M
3300032066|Ga0318514_10749566Not Available519Open in IMG/M
3300032091|Ga0318577_10022500All Organisms → cellular organisms → Bacteria → Proteobacteria2638Open in IMG/M
3300032094|Ga0318540_10013310All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium3278Open in IMG/M
3300032180|Ga0307471_102486458All Organisms → cellular organisms → Bacteria655Open in IMG/M
3300032770|Ga0335085_11579342Not Available680Open in IMG/M
3300032893|Ga0335069_12648387All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rubritepida → unclassified Rubritepida → Rubritepida sp.516Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil42.22%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil11.11%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil10.37%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil9.63%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere5.19%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil2.22%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds1.48%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil1.48%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil1.48%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil1.48%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland1.48%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil1.48%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil1.48%
PalsaEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa1.48%
BiofilmEnvironmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm1.48%
Bog Forest SoilEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil0.74%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil0.74%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil0.74%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil0.74%
Agricultural SoilEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil0.74%
Plant RootsHost-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots0.74%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere0.74%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.74%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001867Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)EnvironmentalOpen in IMG/M
3300003505Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)EnvironmentalOpen in IMG/M
3300004091Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3EnvironmentalOpen in IMG/M
3300005187Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124EnvironmentalOpen in IMG/M
3300005406Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaGEnvironmentalOpen in IMG/M
3300005435Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaGEnvironmentalOpen in IMG/M
3300005439Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaGEnvironmentalOpen in IMG/M
3300005467Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaGEnvironmentalOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300006755Agricultural soil microbial communities from Georgia to study Nitrogen management - GA PlitterEnvironmentalOpen in IMG/M
3300006800Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109EnvironmentalOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300007788Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2EnvironmentalOpen in IMG/M
3300009088Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaGEnvironmentalOpen in IMG/M
3300009089Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaGEnvironmentalOpen in IMG/M
3300009143Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2EnvironmentalOpen in IMG/M
3300010046Tropical forest soil microbial communities from Panama - MetaG Plot_36EnvironmentalOpen in IMG/M
3300010359Tropical forest soil microbial communities from Panama - MetaG Plot_15EnvironmentalOpen in IMG/M
3300010361Tropical forest soil microbial communities from Panama - MetaG Plot_23EnvironmentalOpen in IMG/M
3300010376Tropical forest soil microbial communities from Panama - MetaG Plot_28EnvironmentalOpen in IMG/M
3300011269Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaGEnvironmentalOpen in IMG/M
3300011270Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaGEnvironmentalOpen in IMG/M
3300011271Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaGEnvironmentalOpen in IMG/M
3300012096Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaGEnvironmentalOpen in IMG/M
3300012198Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012205Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaGEnvironmentalOpen in IMG/M
3300012208Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012359Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaGEnvironmentalOpen in IMG/M
3300012971Tropical forest soil microbial communities from Panama - MetaG Plot_1EnvironmentalOpen in IMG/M
3300012989Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MGEnvironmentalOpen in IMG/M
3300016270Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080EnvironmentalOpen in IMG/M
3300016294Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178EnvironmentalOpen in IMG/M
3300016319Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00HEnvironmentalOpen in IMG/M
3300016404Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082EnvironmentalOpen in IMG/M
3300016422Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111EnvironmentalOpen in IMG/M
3300016445Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108EnvironmentalOpen in IMG/M
3300017970Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MGEnvironmentalOpen in IMG/M
3300017973Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MGEnvironmentalOpen in IMG/M
3300020579Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-MEnvironmentalOpen in IMG/M
3300020581Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-MEnvironmentalOpen in IMG/M
3300020582Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-OEnvironmentalOpen in IMG/M
3300020583Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-MEnvironmentalOpen in IMG/M
3300021088Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-MEnvironmentalOpen in IMG/M
3300021168Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-MEnvironmentalOpen in IMG/M
3300021170Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-MEnvironmentalOpen in IMG/M
3300021180Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-OEnvironmentalOpen in IMG/M
3300021377Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7Host-AssociatedOpen in IMG/M
3300021407Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-OEnvironmentalOpen in IMG/M
3300021432Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-MEnvironmentalOpen in IMG/M
3300021476Biofilm microbial communities from the roof of an iron ore cave, State of Minas Gerais, Brazil - TC_06 Biofilm (v2)EnvironmentalOpen in IMG/M
3300021477Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-OEnvironmentalOpen in IMG/M
3300021479Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-MEnvironmentalOpen in IMG/M
3300021560Tropical forest soil microbial communities from Panama - MetaG Plot_4EnvironmentalOpen in IMG/M
3300022533Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-7-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300025913Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025915Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025922Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027874Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)EnvironmentalOpen in IMG/M
3300027875Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027884Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)EnvironmentalOpen in IMG/M
3300027894Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes)EnvironmentalOpen in IMG/M
3300027915Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013 (SPAdes)EnvironmentalOpen in IMG/M
3300027986Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300031234Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2EnvironmentalOpen in IMG/M
3300031236Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1EnvironmentalOpen in IMG/M
3300031545Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26EnvironmentalOpen in IMG/M
3300031561Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26EnvironmentalOpen in IMG/M
3300031573Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111EnvironmentalOpen in IMG/M
3300031668Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23EnvironmentalOpen in IMG/M
3300031679Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23EnvironmentalOpen in IMG/M
3300031680Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22EnvironmentalOpen in IMG/M
3300031708FICUS49499 Metagenome Czech Republic combined assemblyEnvironmentalOpen in IMG/M
3300031713Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22EnvironmentalOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M
3300031724Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20EnvironmentalOpen in IMG/M
3300031751Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24EnvironmentalOpen in IMG/M
3300031754Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515EnvironmentalOpen in IMG/M
3300031768Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22EnvironmentalOpen in IMG/M
3300031769Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f24EnvironmentalOpen in IMG/M
3300031770Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17EnvironmentalOpen in IMG/M
3300031782Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20EnvironmentalOpen in IMG/M
3300031793Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21EnvironmentalOpen in IMG/M
3300031795Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19EnvironmentalOpen in IMG/M
3300031796Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24EnvironmentalOpen in IMG/M
3300031821Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20EnvironmentalOpen in IMG/M
3300031833Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178EnvironmentalOpen in IMG/M
3300031859Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25EnvironmentalOpen in IMG/M
3300031879Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)EnvironmentalOpen in IMG/M
3300031890Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)EnvironmentalOpen in IMG/M
3300031893Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28EnvironmentalOpen in IMG/M
3300031941Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080EnvironmentalOpen in IMG/M
3300031942Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176EnvironmentalOpen in IMG/M
3300031945Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082EnvironmentalOpen in IMG/M
3300032001Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)EnvironmentalOpen in IMG/M
3300032035Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170EnvironmentalOpen in IMG/M
3300032039Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21EnvironmentalOpen in IMG/M
3300032055Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23EnvironmentalOpen in IMG/M
3300032059Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27EnvironmentalOpen in IMG/M
3300032065Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20EnvironmentalOpen in IMG/M
3300032066Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18EnvironmentalOpen in IMG/M
3300032091Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25EnvironmentalOpen in IMG/M
3300032094Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300032770Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5EnvironmentalOpen in IMG/M
3300032893Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI12627J18819_1008587013300001867Forest SoilTARVLFLYTPAGAGGFFEEQLARPAGSANGPEANEMRRRHGWEIVGPPPF*
JGIcombinedJ51221_1013252123300003505Forest SoilFLYTPAGAGGFFEEQLARPAGSANGPEANEMRRRHGWEIVGPPPF*
Ga0062387_10103034923300004091Bog Forest SoilRVLFLYTPADAGGFFEEQLGRPAGSANGPEANEMRRRHGWEIIGPPPF*
Ga0066675_1143907113300005187SoilYTPAKAGGFFEERLGRTEGSINGAEANEMRRRHGWEIVGLPPF*
Ga0070703_1001509213300005406Corn, Switchgrass And Miscanthus RhizosphereLYTPAPAGKFFEELLRRPTGEINGDEANEIRRRHRWEVVGPPPF*
Ga0070714_10041829023300005435Agricultural SoilVLFLYTPAVAGGFFEEQLARPAGSANGAEANEMRRRHGWEIIGPPPF*
Ga0070711_10097149713300005439Corn, Switchgrass And Miscanthus RhizosphereAGAGGFFEEQLPLNRPAGSINGAEANEIRRRHGWEIVGPPPF*
Ga0070706_10002512373300005467Corn, Switchgrass And Miscanthus RhizosphereLFLYTPAPAGKFFEELLTRPAGEINGDDANEIRRRHRWEVVGPPPF*
Ga0070706_10056326513300005467Corn, Switchgrass And Miscanthus RhizosphereGAETCRVLFLYTPAPAGKFFEELLTRPIGEINGDEANEIRRRHRWEVVGPPPF*
Ga0066903_10271351623300005764Tropical Forest SoilYTPAGAGGFFEEQLGQPPGSIVGDEANEIRQRHGWEIICPPPF*
Ga0079222_1086998823300006755Agricultural SoilTGAETGRVLFLYTPAGAGGFFEEQLARPAGSANGPEANEMRRRHGWEIVGPPPF*
Ga0066660_1151695813300006800SoilRVLFLYTPARAGGFFEEQLGRRAGSANGPEANEMRRRHGWEIIGPPPF*
Ga0075425_10092685923300006854Populus RhizosphereRVLFLYTPAGAGGFFEEQLARPAGSANGPEASEMRRRHGWEIVGPPPF*
Ga0099795_1035871123300007788Vadose Zone SoilFFEEQLARPAGSANGPEANEMRRRHGWEIVGPPPF*
Ga0099830_1072586813300009088Vadose Zone SoilTPAPAGKFFEELLTRPIGEINGDEANEIRRRHRWEVVGPPPF*
Ga0099828_1034748413300009089Vadose Zone SoilPAPAGKFFEELLTRPTGEINGDEANEIRRRHRWEVVGPPPF*
Ga0099792_1040443923300009143Vadose Zone SoilFLYTPAKAGGFFEERLGRPEGSINGAEANEIRRRHGWEIVGPPPF*
Ga0126384_1095269423300010046Tropical Forest SoilPAGAGGFFEEQLGRPVGSANGPEANEMRRRHGWEIVGPPPF*
Ga0126376_1082824723300010359Tropical Forest SoilLYTPAGAGGFFEEQLDRPVGSANGPEANEMRRRHGWEIVGPPPF*
Ga0126376_1209289723300010359Tropical Forest SoilEACRVLFLYTPAPAGKFFEEMLTRPPGEINGDEANEIRRRHGWEVVGPPPL*
Ga0126378_1023396033300010361Tropical Forest SoilFFEEQLVRPAGSANGPEANEMRRRHGWEVVGPPPL*
Ga0126378_1144532533300010361Tropical Forest SoilFFEERLGRAEKLDPNGAEANEMRRRHGWEIVGPPPF*
Ga0126378_1175900013300010361Tropical Forest SoilFLYTPADAGGFFEAQLGRPPGSIVGDEANEIRRRHGWEIIGPPPF*
Ga0126378_1221200923300010361Tropical Forest SoilAKAGGFFEERLGSVPADPNGSEAIAQRERHGWEVIGPPPF*
Ga0126381_10270032123300010376Tropical Forest SoilKFFEELLTRPPGEINGDEANEIRRRHGWEVVGPPPL*
Ga0126381_10429283623300010376Tropical Forest SoilETGRVLFLYTPAGAGGFFEEQLGRPAGSANGPEANEMRLRHGSEIVGPPPF*
Ga0137392_1004581853300011269Vadose Zone SoilVLFLYTPAPAGKFFEELLTRPTGEINGDEANEIRRRHRWEVIGPPPF*
Ga0137392_1052480923300011269Vadose Zone SoilVLFLYTPAPAGKFFEELLTRPTGEINGDEANEIRRRHRWEVVGPPPF*
Ga0137391_1007240553300011270Vadose Zone SoilVLFLYTPAPAGKFFEELLTRPTGEINGDEANEIRRRHRWEVIGPAPF*
Ga0137393_1148652113300011271Vadose Zone SoilPAKAGGFFEERLGRPEGSINDTESNEMRRRHGWEIVGPPPF*
Ga0137389_1054013523300012096Vadose Zone SoilLYTPAGAGKFFEEQVRQPLTGPANGPAAIALRERHGWEVVGPPPF*
Ga0137364_1069051713300012198Vadose Zone SoilLYTPAGAGGFFEEQLGRPAGSIVGAEANEIRRRHGWEIVGPPPF*
Ga0137362_1065924143300012205Vadose Zone SoilGAGGFFEEQLGRPAQSLNGAEANEIRRRHGWEIVGPPPF*
Ga0137376_1066189713300012208Vadose Zone SoilAGGFFEERLGRPEGSINDTEANDMRRRHGWEIVGPPPF*
Ga0137385_1158231113300012359Vadose Zone SoilPATAGGFFEERLERPEGSINDTEANEMRRRHGWEIVGPPPF*
Ga0126369_1068657313300012971Tropical Forest SoilTETGRVLFLYTPAGAGGFFEEQLGRPGGSANGPEANEMRRRHGWEIVGPPPF*
Ga0126369_1106712023300012971Tropical Forest SoilYTPADAGGFFEEQLGRPAGSINGAEANEMRRRHGWEIVGPPPF*
Ga0126369_1158360923300012971Tropical Forest SoilGGFFEEQLGRPAGSANGPEANEMRRRRGWEIVGPPPF*
Ga0164305_1190990113300012989SoilGFFEEQLARPAGSINGAEANEIRRRHGWEIVGPPPF*
Ga0182036_1014394013300016270SoilAGGFFEERLGRPAGSINGEEANEIRRRHGWEIIGPPPF
Ga0182041_1201815323300016294SoilRVLFLYTPAGAGGFFEEQLDRPAGSANGPEANEMRRRHGWEIVGPPPF
Ga0182033_1043200113300016319SoilTGAQTGRVLFPYTPAGASGFFEEQLSRPAGSANGPEANEMRRRHGWEVVGPPPF
Ga0182033_1094909023300016319SoilTPAGAGGFFEEQLGRPAGSANGPEANEMRRRHGWEIVGPPPF
Ga0182037_1106623323300016404SoilAAGGFFEEQLARPSGSANGPEANEMRRRHGWEIVGPPPF
Ga0182037_1197028323300016404SoilFLYTPAGAGGFFEEQLDRPAGSANGPEANEMRRRHGWEIVGPPPF
Ga0182039_1021306733300016422SoilETGRVLFLYTPATAGGFFEEQLSRPAGSANGPEANEMRRRHGWKIVGPPPF
Ga0182038_1051877413300016445SoilPAGKFFEELLTRPPGEINGDEANEIRRRHGWEVVGPPPL
Ga0182038_1166732223300016445SoilETGRVLFLYTPASAGGFFEEPLARPSVSANGPEVNEMRRRHGWEIVGPPPL
Ga0187783_1053938033300017970Tropical PeatlandNTGTQAARILFLYTPAEAGGFFEERLHQPAGSINGEEANEMRRRHGWEIIGPPPFGSPPA
Ga0187780_1057082023300017973Tropical PeatlandLFLYTPAAAGGFFEEMAERPASEINGAEANEVRKRHRWEVVGPPPF
Ga0210407_1013150613300020579SoilDAGGFFEEQLGRPAGSANGPEANEMRRRHGWEIVGPPPF
Ga0210407_1122214123300020579SoilTGTETGRVLFLYTPADAGGFFEEQLGRPAGSANGPEANEMRRRHGWEIIGPPPF
Ga0210399_1006550213300020581SoilSAETGRVLFLYTPAKAGGFFEERLGRPEGSINGAEANEMRRRHGWEIVGPPPF
Ga0210399_1076854013300020581SoilKNTGAETGRVLFLYMLAGAGGFFEEQLGRPAGSANGPEANEMRRRHGWEIVGPPPF
Ga0210395_1049413523300020582SoilRVLFLYTPAGAGGFFEEQLGRPAGSANGPEANEMRRRHGWEIVGPPPF
Ga0210401_1098223213300020583SoilETGRVLFLYTPAGAGGFFEEQLGRPAGSANGPEANEMRRRHGWEIVGPPPF
Ga0210404_1058771823300021088SoilAGAGGFFEEQLGRPAGSANGPEANEMRRRHGWEIVGPPPF
Ga0210406_1017074513300021168SoilLFLYTPAGAGGFFEEQLGRPAGSANGPEANEMRRRHGWEIVGPPPF
Ga0210400_1070876033300021170SoilFFEEQLNRPAGSINGAEANEIRRRHGWEIVGPPPF
Ga0210396_1058832623300021180SoilETGRVLFLYTPAVAGGFFEEQLGRPAGSANGPEANEMRRRHGWEMIGPPPF
Ga0213874_1035237613300021377Plant RootsETARILFLYTPAKAGGFFEERLTNPAGEANSLEAIAQRERHGWEVVGPPPF
Ga0210383_1115546713300021407SoilETGRLLFLYTPAGAGGFFEEQLARPAGSANGPEANEMRRRHGWEIVGPPPF
Ga0210384_1015711813300021432SoilLYTPAAAGGFFEELAERPAGEINGAEANEIRQRHRWEVVGPPPF
Ga0187846_10001948103300021476BiofilmVLFLYTPGRGGGFFEERSGRPAGSINGEEANEIRRRHGWEIISPPPF
Ga0187846_1001666443300021476BiofilmCFSTRRAGAGGFFEERLGRPAGSINGEEANEIRRRHGWEIIGPPPF
Ga0210398_1024480813300021477SoilTGADTGQVLFLYTPAGAGKFFEEQIARPLSGPANGPEAIALRERHRWEVVGPPPF
Ga0210410_1090086513300021479SoilVLFLYTAAGAGGFFEEQLGRPAGSIVGAEANEIRRRHGWEIVGPPPF
Ga0210410_1095175523300021479SoilNTGAETGRVLFLYTPADAGGFFEEQLGQPARSANGPEANEMRRRHGWEIIGPPPF
Ga0126371_1169729023300021560Tropical Forest SoilAETGRVLFLYTPASAGGFFEEQLARPSGSANGSEANEMRRRHGWEIVGPPPF
Ga0126371_1239218723300021560Tropical Forest SoilYTPAKAGGFFEERLGSVPADPNGSEAIAQRERHGWEVIGPPPF
Ga0126371_1251155613300021560Tropical Forest SoilAGGFFEERLGATPGDPNGPEAIAQRERHGWEVVGPPPF
Ga0242662_1005062513300022533SoilETTRVLFLYTPADAGGFFEEQLGRPAGSANGPEANEMRRRHGWEIIGPPPF
Ga0207695_1022254613300025913Corn RhizosphereTGRVLFLYTPAPAGKFFEELLDRPAGEINGAEANEIRQRHRWEVVGPPPL
Ga0207693_1001309633300025915Corn, Switchgrass And Miscanthus RhizosphereVLFFYTPAVAGGFFEEQLGRPAGSANGPEANEMRRRHGWEIVGPSPF
Ga0207693_1088045613300025915Corn, Switchgrass And Miscanthus RhizosphereGKTPAPKPPRVLFLYAPAGAGGFFEEQLGRPTGSANGPEANEMRRRHGWEIVGPPPF
Ga0207646_1068345533300025922Corn, Switchgrass And Miscanthus RhizosphereVLFLYTPAPAGKFFEELLTRPAGEINGDDANEIRRRHRWEVVGPPPF
Ga0209465_1003477613300027874Tropical Forest SoilVLFLYTPAGAGGFFEEQLVRPAGSANGPEANEMRRRHGWEVVGPPPL
Ga0209283_1014197113300027875Vadose Zone SoilALKNTGAETCRVLFLYTPAPAGKFFEELLTRPTGEINGDEANEIRRRHRWEVVGPPPF
Ga0209275_1006533113300027884SoilGGFFEEQLARPAGSANGPEAKEMRHRHGWEIVGRPPF
Ga0209068_1079092913300027894WatershedsYTPAKAGGFFEEMLDRQGAEINGAETNEIRQRHRWEVVGPPPFCEVGNSS
Ga0209069_1095667513300027915WatershedsMVDASETGRVLFLYTPAKAGGFFEERLRRPEELDPNGAEANQMRRRHGWDIIGPPPL
Ga0209168_1027089623300027986Surface SoilLYTPAAAGGFFEELLDNPADAINGDKANEIRQRHRWEVVGPPPF
Ga0302325_1090628113300031234PalsaVLFLYTPAKAGGFFEELLGRPAGPINGDEANEIRKRRGWEIVGPPPF
Ga0302324_10226531823300031236PalsaVLFLYTPAKAGGFFEELLGRPAGPINGDEANEIRNRRGWEIVGPPPF
Ga0318541_1008869943300031545SoilVLFLYTPAGAGGFFEEQLGRPVGSANGPEANEMRRRHGWEIVGPPPF
Ga0318541_1011656833300031545SoilMPGKTLTPKPAPVPLLYAPAGAGGVFEERLRRPAGSINGPEANEMRRRHGWEIVGPPPF
Ga0318528_1001395813300031561SoilVFLYTPAGAGGFFEERLGRPAGSINGEEANEIRRRHGWEIIGPPPF
Ga0310915_1023359813300031573SoilGFFEEQLVRPAGSANGPEANEMRRRHGWEVVGPPPF
Ga0310915_1070886223300031573SoilGRVLFLYTPASAGGFFEEQLAQPSGSANGPEANEMRRRHGWEIGPPPF
Ga0318542_1010248113300031668SoilAGAGGFFEERLGRPAGSINGEEANEIRRRHGWEIIGPPPF
Ga0318561_1000994243300031679SoilVLFLYTPAGAGGFFEERLGRPAGSINGEEANEIRRRHGWEIIGPPPF
Ga0318574_1015141313300031680SoilLYTPAGAGGFFEEQLGRPVGSANGPEANEMRRRHGWEIVGPPPF
Ga0318574_1062514913300031680SoilFLYTPASAGGFFEEQLARPSGSTNGPEANEMRRRHGWEIVGPPPF
Ga0310686_11410600333300031708SoilVANPANTGGDTGRVLFLYTPARAGGFFEERLGRPAGSINGAGANEIRRRHGREIVGPPPF
Ga0318496_1081875913300031713SoilGFFEEQMGRPAGSANGPEANEMRRRHGWEIVGPPPF
Ga0307469_1197941613300031720Hardwood Forest SoilETCRVLFLYTPAPAGKFFEELLTHPIGAINGDEANEIRRRHRWEVVGPPPF
Ga0318500_1065349813300031724SoilAETGRVLFLYTPAGAGGFFEEQLGRPVGSANGPEANEMRRRHGWEIVGPPPF
Ga0318494_1089750413300031751SoilYTPAGAGGFFEEQLGRPVGSANGPEANEMRRRHGWEVVGPPPF
Ga0307475_1119575123300031754Hardwood Forest SoilVWLSAPPNTVANPANTGGDTGRVLFLYTPARAGGFFEERLGRPAGSINGEGANEIRRRHGREIVGPPPF
Ga0318509_1005531143300031768SoilGAETGRVLFLYTPAGAGGFFEEQLGRPVGSANGPEANEMRRRHGWEIVGPPPF
Ga0318526_1028564323300031769SoilLYTPAPAGKFFEELLTRPPGEINGDEANEIRRRHGWEVVGPPPL
Ga0318521_1074588013300031770SoilFLYTPAGAGGFFEEQLGRPVGSANGPEANEMRRRHGWEIVGPPPF
Ga0318552_1008182613300031782SoilRPVLFLYTPAGAGGFFEERLGRPAGSINGEEANEIRRRHGWEIIGPPPF
Ga0318552_1035161023300031782SoilVTGRVLFLYTPAGAGGFFEEQMGRPAGSANGPEANEMRRRHGWEIVGPPPF
Ga0318548_1023282413300031793SoilAETGRVLFLYTPAGAGGFFEEQLDRRAGSANGPEANEMRRRHGWEIVGPPPF
Ga0318557_1002403213300031795SoilYTPAGAGGFFEEQLGRPVGSANGPEANDMRRRHGWEVVGPPPF
Ga0318557_1019230413300031795SoilLYTPAGAGGFSEERLGRPAGSINGEEANEIRRRHGWEIIGPPPF
Ga0318576_1028468423300031796SoilPGKTLTPKPAPVPLLYAPAGAGGVFEERLRRPAGSINGPEANEMRRRHGWEIVGPPPF
Ga0318576_1047913523300031796SoilGAGTGRVLFLYTPADAGGFFKEQLGRPAGSINGAEANEMRRRHGWEIVGPPPF
Ga0318576_1050006523300031796SoilGCVLFLYTPAGAGGFFEERLGRPAGSINGEEANEIRRRHGWEIIGPPPF
Ga0318567_1052099523300031821SoilLYTPASAGGFFEEQLARPSGSANGPEANEMRRRHGWEIVGPPPF
Ga0310917_1056113423300031833SoilDETGRVLFLYTPAGAGGFFEEQLGRPVGSANGPEASEMRRRHGWEIVGPPPF
Ga0318527_1001439633300031859SoilAETGRVLFLYTPAGAGGFFEERLGRPAGSINGEEANEIRRRHGWEIIGPPPF
Ga0318527_1004476113300031859SoilKNASAEDCRVLFLYTPAPAGKFFEELLTRPPGEINGDEANEIRRRHGWEVVGPPPL
Ga0306919_1055133223300031879SoilVLFLYTPAGAGGFFEEQLGRPVGSANGPEANEMRRRHGWEIVGPTPF
Ga0306925_1019692613300031890SoilFFEERLGRPAGSINGEEANEIRRRHGWEIIGPPPF
Ga0318536_1048071113300031893SoilRVLFVYTPAGAGGIFEEQLGRPAVSANGPEANEMRRRHGWEIVGPPPF
Ga0318536_1049545323300031893SoilAGGFFEEQLARPSGSANGPEANEMRRRHGWKIVGPPPF
Ga0310912_1008153443300031941SoilGGFSEERLGRPAGSINGEEANEIRRRHGWEIIGPPPF
Ga0310916_1032002513300031942SoilFFEEQLGRPVGSVNGPEANEMRRRHGWEIVGPPPF
Ga0310913_1053655113300031945SoilGFFEEQLAQPSGSANGPEANEMRRRHGWEIGPPPF
Ga0310913_1127794213300031945SoilRVLFLYTPASAGGFFEEQLARPSGSANGPEANEMRRRHGWEIVGPPPF
Ga0306922_1020440023300032001SoilVLFPYTPAGASGFFEEQLSRPAGSANGPEANEMRRRHGWEVVGPPPF
Ga0306922_1112104913300032001SoilAAAGGFFEEQLGRPAGAANGPEANEMRRRHGWEVVEPPPF
Ga0310911_1003437633300032035SoilFLYTPAGAGGFFEERLGRPAGSINGEEANEIRRRHGWEIIGPPPF
Ga0318559_1002040833300032039SoilGAGGFFEERLGRPAGSINGEEANEIRRRHGWEIIGPPPF
Ga0318575_1037267933300032055SoilFFEEQLGRPVGSANGPEANEMRRRHGWEIVGPPPF
Ga0318533_1117222613300032059SoilYTPAGAGGFFEEQLGRPAVSANGPEANEMRRRHGWEIVGPPPF
Ga0318513_1018598713300032065SoilFLYTPDGAGGFFEERLGRPAGSINGEEANEIRRRHGWEIIGPPPF
Ga0318514_1074956613300032066SoilFPYTPAAAGGFFEEQLGRPAGAANGPEANEMRRRHGWEVVEPPLR
Ga0318577_1002250053300032091SoilFLYTPAGAGGFFEEQLDRPAGSANGPEANEMRCRHGWEIVGPPPF
Ga0318540_1001331013300032094SoilGADIGRVLFLYTPAGAGGFSEERLGRPAGSINGEEANEIRRRHGWEIIGPPPF
Ga0307471_10248645813300032180Hardwood Forest SoilVLFLYTPAGAGGFFEEQLRQPAGSINGAEANEIRRLHGWEIVGPPPF
Ga0335085_1157934213300032770SoilYTPAKAGGFFEERLAHPGGEANGPEANAMRERHGWEIVGPPPF
Ga0335069_1264838713300032893SoilARILFLYTPGKAGGFYEERLTHPDGEANGPEANAMRERHGWEIVGPPPF

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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