NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F058046

Metagenome Family F058046

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F058046
Family Type Metagenome
Number of Sequences 135
Average Sequence Length 58 residues
Representative Sequence DHLRSRYNLAFVSTNKKRDGTTRKLKLDVAPNLQKSPGKLVVKARRSYVAPRS
Number of Associated Samples 116
Number of Associated Scaffolds 135

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 0.74 %
% of genes near scaffold ends (potentially truncated) 98.52 %
% of genes from short scaffolds (< 2000 bps) 91.11 %
Associated GOLD sequencing projects 109
AlphaFold2 3D model prediction Yes
3D model pTM-score0.21

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (94.815 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil
(17.037 % of family members)
Environment Ontology (ENVO) Unclassified
(40.000 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(52.593 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 9.88%    β-sheet: 14.81%    Coil/Unstructured: 75.31%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.21
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 135 Family Scaffolds
PF14534DUF4440 2.96
PF04343DUF488 2.22
PF05016ParE_toxin 1.48
PF07731Cu-oxidase_2 1.48
PF00654Voltage_CLC 1.48
PF00326Peptidase_S9 1.48
PF00282Pyridoxal_deC 0.74
PF01713Smr 0.74
PF05137PilN 0.74
PF10531SLBB 0.74
PF01909NTP_transf_2 0.74
PF01532Glyco_hydro_47 0.74
PF03476MOSC_N 0.74
PF13414TPR_11 0.74
PF05988DUF899 0.74
PF14317YcxB 0.74
PF03713DUF305 0.74
PF14329DUF4386 0.74
PF04679DNA_ligase_A_C 0.74
PF13228DUF4037 0.74
PF13676TIR_2 0.74
PF16242Pyrid_ox_like 0.74
PF13419HAD_2 0.74
PF13443HTH_26 0.74
PF00072Response_reg 0.74
PF04055Radical_SAM 0.74

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 135 Family Scaffolds
COG3189Uncharacterized conserved protein YeaO, DUF488 familyFunction unknown [S] 2.22
COG0038H+/Cl- antiporter ClcAInorganic ion transport and metabolism [P] 1.48
COG2132Multicopper oxidase with three cupredoxin domains (includes cell division protein FtsP and spore coat protein CotA)Cell cycle control, cell division, chromosome partitioning [D] 1.48
COG3166Type IV pilus assembly protein PilNCell motility [N] 1.48
COG0076Glutamate or tyrosine decarboxylase or a related PLP-dependent proteinAmino acid transport and metabolism [E] 0.74
COG1793ATP-dependent DNA ligaseReplication, recombination and repair [L] 0.74
COG3217N-hydroxylaminopurine reductase subunit YcbX, contains MOSC domainDefense mechanisms [V] 0.74
COG3544Uncharacterized conserved protein, DUF305 familyFunction unknown [S] 0.74
COG4312Predicted dithiol-disulfide oxidoreductase, DUF899 familyGeneral function prediction only [R] 0.74

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms94.81 %
UnclassifiedrootN/A5.19 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000364|INPhiseqgaiiFebDRAFT_105475599All Organisms → cellular organisms → Bacteria → Acidobacteria1271Open in IMG/M
3300000559|F14TC_100959790All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium1346Open in IMG/M
3300000955|JGI1027J12803_105201957All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium857Open in IMG/M
3300003267|soilL1_10014317All Organisms → cellular organisms → Bacteria1933Open in IMG/M
3300003322|rootL2_10271485All Organisms → cellular organisms → Bacteria → Acidobacteria1780Open in IMG/M
3300004114|Ga0062593_102941507All Organisms → cellular organisms → Bacteria544Open in IMG/M
3300004479|Ga0062595_101709373All Organisms → cellular organisms → Bacteria → Acidobacteria593Open in IMG/M
3300004643|Ga0062591_102240969All Organisms → cellular organisms → Bacteria569Open in IMG/M
3300005171|Ga0066677_10206516All Organisms → cellular organisms → Bacteria1101Open in IMG/M
3300005171|Ga0066677_10551419All Organisms → cellular organisms → Bacteria659Open in IMG/M
3300005176|Ga0066679_10041576All Organisms → cellular organisms → Bacteria → Acidobacteria2600Open in IMG/M
3300005177|Ga0066690_10147427All Organisms → cellular organisms → Bacteria1544Open in IMG/M
3300005177|Ga0066690_10916825All Organisms → cellular organisms → Bacteria → Acidobacteria558Open in IMG/M
3300005178|Ga0066688_10583909All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium718Open in IMG/M
3300005179|Ga0066684_10249509All Organisms → cellular organisms → Bacteria1165Open in IMG/M
3300005289|Ga0065704_10328131All Organisms → cellular organisms → Bacteria → Acidobacteria842Open in IMG/M
3300005293|Ga0065715_10572706All Organisms → cellular organisms → Bacteria → Acidobacteria692Open in IMG/M
3300005331|Ga0070670_101132203All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales714Open in IMG/M
3300005331|Ga0070670_101694952All Organisms → cellular organisms → Bacteria → Acidobacteria581Open in IMG/M
3300005334|Ga0068869_100971796All Organisms → cellular organisms → Bacteria → Proteobacteria738Open in IMG/M
3300005341|Ga0070691_10512198All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium695Open in IMG/M
3300005343|Ga0070687_100775703All Organisms → cellular organisms → Bacteria677Open in IMG/M
3300005437|Ga0070710_10785201All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium679Open in IMG/M
3300005438|Ga0070701_11010692All Organisms → cellular organisms → Bacteria → Acidobacteria581Open in IMG/M
3300005444|Ga0070694_100769882All Organisms → cellular organisms → Bacteria → Proteobacteria787Open in IMG/M
3300005444|Ga0070694_100789814All Organisms → cellular organisms → Bacteria778Open in IMG/M
3300005459|Ga0068867_100390269All Organisms → cellular organisms → Bacteria1172Open in IMG/M
3300005459|Ga0068867_101319945All Organisms → cellular organisms → Bacteria → Acidobacteria666Open in IMG/M
3300005518|Ga0070699_100852688All Organisms → cellular organisms → Bacteria834Open in IMG/M
3300005552|Ga0066701_10141890All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium1440Open in IMG/M
3300005553|Ga0066695_10724083All Organisms → cellular organisms → Bacteria → Acidobacteria581Open in IMG/M
3300005559|Ga0066700_11153749All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium505Open in IMG/M
3300005576|Ga0066708_10512997All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium773Open in IMG/M
3300005576|Ga0066708_10820173All Organisms → cellular organisms → Bacteria → Acidobacteria583Open in IMG/M
3300005578|Ga0068854_100632865Not Available917Open in IMG/M
3300005598|Ga0066706_10966564All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium659Open in IMG/M
3300005615|Ga0070702_101314335All Organisms → cellular organisms → Bacteria → Acidobacteria588Open in IMG/M
3300005713|Ga0066905_101981810All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium540Open in IMG/M
3300005719|Ga0068861_100210983All Organisms → cellular organisms → Bacteria → Acidobacteria1636Open in IMG/M
3300005842|Ga0068858_100196474All Organisms → cellular organisms → Bacteria1906Open in IMG/M
3300005844|Ga0068862_100576274All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium1077Open in IMG/M
3300006755|Ga0079222_12619826All Organisms → cellular organisms → Bacteria507Open in IMG/M
3300006796|Ga0066665_10419303All Organisms → cellular organisms → Bacteria → Acidobacteria1106Open in IMG/M
3300006797|Ga0066659_11045379All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 83682Open in IMG/M
3300006797|Ga0066659_11925302All Organisms → cellular organisms → Bacteria502Open in IMG/M
3300006800|Ga0066660_10064787All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium2451Open in IMG/M
3300006800|Ga0066660_11279331All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium574Open in IMG/M
3300006804|Ga0079221_10361039All Organisms → cellular organisms → Bacteria882Open in IMG/M
3300006904|Ga0075424_100708702Not Available1075Open in IMG/M
3300006914|Ga0075436_100639736All Organisms → cellular organisms → Bacteria → Nitrospirae → Thermodesulfovibrionia → Thermodesulfovibrionales → Thermodesulfovibrionaceae → Thermodesulfovibrio → Thermodesulfovibrio islandicus785Open in IMG/M
3300009012|Ga0066710_104528043All Organisms → cellular organisms → Bacteria → Acidobacteria519Open in IMG/M
3300009089|Ga0099828_10583060All Organisms → cellular organisms → Bacteria1007Open in IMG/M
3300009093|Ga0105240_12320466All Organisms → cellular organisms → Bacteria → Acidobacteria556Open in IMG/M
3300009098|Ga0105245_11227563All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium798Open in IMG/M
3300009098|Ga0105245_12525577All Organisms → cellular organisms → Bacteria → Acidobacteria567Open in IMG/M
3300009101|Ga0105247_10616669All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium806Open in IMG/M
3300009143|Ga0099792_10386800Not Available853Open in IMG/M
3300009148|Ga0105243_10505932All Organisms → cellular organisms → Bacteria → Acidobacteria1146Open in IMG/M
3300009177|Ga0105248_12350798All Organisms → cellular organisms → Bacteria607Open in IMG/M
3300009177|Ga0105248_12966840All Organisms → cellular organisms → Bacteria → Acidobacteria541Open in IMG/M
3300010036|Ga0126305_10041854All Organisms → cellular organisms → Bacteria → Acidobacteria2558Open in IMG/M
3300010046|Ga0126384_10512781All Organisms → cellular organisms → Bacteria → Acidobacteria1036Open in IMG/M
3300010323|Ga0134086_10261992All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium661Open in IMG/M
3300010366|Ga0126379_13368114All Organisms → cellular organisms → Bacteria → Acidobacteria535Open in IMG/M
3300010391|Ga0136847_13575453All Organisms → cellular organisms → Bacteria → Acidobacteria754Open in IMG/M
3300010396|Ga0134126_12715132All Organisms → cellular organisms → Bacteria → Acidobacteria537Open in IMG/M
3300010397|Ga0134124_10301086All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → Armatimonadia → Capsulimonadales → Capsulimonadaceae → Capsulimonas → Capsulimonas corticalis1495Open in IMG/M
3300010397|Ga0134124_12579526All Organisms → cellular organisms → Bacteria → Acidobacteria551Open in IMG/M
3300010400|Ga0134122_11367483All Organisms → cellular organisms → Bacteria → Acidobacteria720Open in IMG/M
3300010400|Ga0134122_11592007All Organisms → cellular organisms → Bacteria → Acidobacteria677Open in IMG/M
3300010401|Ga0134121_12293929All Organisms → cellular organisms → Bacteria578Open in IMG/M
3300011119|Ga0105246_10077328All Organisms → cellular organisms → Bacteria2361Open in IMG/M
3300011119|Ga0105246_11317088All Organisms → cellular organisms → Bacteria → Acidobacteria670Open in IMG/M
3300011270|Ga0137391_11188924All Organisms → cellular organisms → Bacteria → Acidobacteria610Open in IMG/M
3300011436|Ga0137458_1050640All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1115Open in IMG/M
3300012096|Ga0137389_10027049All Organisms → cellular organisms → Bacteria → Acidobacteria4113Open in IMG/M
3300012200|Ga0137382_10371747All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1004Open in IMG/M
3300012201|Ga0137365_10103271All Organisms → cellular organisms → Bacteria2145Open in IMG/M
3300012207|Ga0137381_10233120All Organisms → cellular organisms → Bacteria1598Open in IMG/M
3300012207|Ga0137381_10761584Not Available840Open in IMG/M
3300012210|Ga0137378_10464954All Organisms → cellular organisms → Bacteria1170Open in IMG/M
3300012211|Ga0137377_11570604Not Available582Open in IMG/M
3300012212|Ga0150985_111995198All Organisms → cellular organisms → Bacteria → Acidobacteria557Open in IMG/M
3300012355|Ga0137369_11008641All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium551Open in IMG/M
3300012357|Ga0137384_10021267All Organisms → cellular organisms → Bacteria5293Open in IMG/M
3300012685|Ga0137397_10423397All Organisms → cellular organisms → Bacteria → Acidobacteria992Open in IMG/M
3300012922|Ga0137394_10964564All Organisms → cellular organisms → Bacteria → Acidobacteria710Open in IMG/M
3300012923|Ga0137359_10157339All Organisms → cellular organisms → Bacteria → Proteobacteria2026Open in IMG/M
3300012923|Ga0137359_10538466All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1028Open in IMG/M
3300012925|Ga0137419_11263125All Organisms → cellular organisms → Bacteria → Acidobacteria620Open in IMG/M
3300012929|Ga0137404_11800100All Organisms → cellular organisms → Bacteria569Open in IMG/M
3300012944|Ga0137410_10785757All Organisms → cellular organisms → Bacteria → Acidobacteria798Open in IMG/M
3300012958|Ga0164299_11026702All Organisms → cellular organisms → Bacteria → Acidobacteria610Open in IMG/M
3300012971|Ga0126369_10362346All Organisms → cellular organisms → Bacteria → Acidobacteria1476Open in IMG/M
3300012972|Ga0134077_10158544All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium906Open in IMG/M
3300012989|Ga0164305_10383795All Organisms → cellular organisms → Bacteria → Acidobacteria1070Open in IMG/M
3300013308|Ga0157375_12238266All Organisms → cellular organisms → Bacteria651Open in IMG/M
3300014157|Ga0134078_10589671All Organisms → cellular organisms → Bacteria → Acidobacteria531Open in IMG/M
3300014166|Ga0134079_10659234All Organisms → cellular organisms → Bacteria → Acidobacteria528Open in IMG/M
3300015371|Ga0132258_10033806All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes11471Open in IMG/M
3300015372|Ga0132256_100435482All Organisms → cellular organisms → Bacteria → Acidobacteria1416Open in IMG/M
3300015372|Ga0132256_103016485All Organisms → cellular organisms → Bacteria → Acidobacteria566Open in IMG/M
3300015373|Ga0132257_100162166All Organisms → cellular organisms → Bacteria → Acidobacteria2627Open in IMG/M
3300015373|Ga0132257_100865036All Organisms → cellular organisms → Bacteria → Acidobacteria1131Open in IMG/M
3300015374|Ga0132255_100638622All Organisms → cellular organisms → Bacteria1577Open in IMG/M
3300015374|Ga0132255_104936158Not Available565Open in IMG/M
3300018000|Ga0184604_10072534All Organisms → cellular organisms → Bacteria → Acidobacteria1008Open in IMG/M
3300018054|Ga0184621_10332182All Organisms → cellular organisms → Bacteria → Acidobacteria535Open in IMG/M
3300018071|Ga0184618_10336884All Organisms → cellular organisms → Bacteria → Acidobacteria644Open in IMG/M
3300018433|Ga0066667_10717361All Organisms → cellular organisms → Bacteria → Acidobacteria841Open in IMG/M
3300018468|Ga0066662_10444562All Organisms → cellular organisms → Bacteria1158Open in IMG/M
3300018468|Ga0066662_10684121All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium976Open in IMG/M
3300020001|Ga0193731_1096274All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium764Open in IMG/M
3300024246|Ga0247680_1073012All Organisms → cellular organisms → Bacteria504Open in IMG/M
3300025315|Ga0207697_10208060All Organisms → cellular organisms → Bacteria862Open in IMG/M
3300025899|Ga0207642_10627978All Organisms → cellular organisms → Bacteria → Acidobacteria671Open in IMG/M
3300025911|Ga0207654_11445753All Organisms → cellular organisms → Bacteria → Acidobacteria501Open in IMG/M
3300025918|Ga0207662_10762567All Organisms → cellular organisms → Bacteria → Acidobacteria681Open in IMG/M
3300025934|Ga0207686_10502963All Organisms → cellular organisms → Bacteria → Acidobacteria940Open in IMG/M
3300025941|Ga0207711_10896579All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium824Open in IMG/M
3300025942|Ga0207689_10080805All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → Armatimonadia → Capsulimonadales → Capsulimonadaceae → Capsulimonas → Capsulimonas corticalis2672Open in IMG/M
3300025945|Ga0207679_11207250All Organisms → cellular organisms → Bacteria694Open in IMG/M
3300026088|Ga0207641_10298973All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium1520Open in IMG/M
3300026318|Ga0209471_1031204All Organisms → cellular organisms → Bacteria → Acidobacteria2601Open in IMG/M
3300026320|Ga0209131_1089262All Organisms → cellular organisms → Bacteria1645Open in IMG/M
3300026557|Ga0179587_10834953All Organisms → cellular organisms → Bacteria → Acidobacteria608Open in IMG/M
3300027775|Ga0209177_10450132Not Available527Open in IMG/M
3300027882|Ga0209590_10942425All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium541Open in IMG/M
3300027903|Ga0209488_10942684All Organisms → cellular organisms → Bacteria → Acidobacteria602Open in IMG/M
3300028536|Ga0137415_11329506All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium538Open in IMG/M
3300031740|Ga0307468_101005169All Organisms → cellular organisms → Bacteria → Acidobacteria734Open in IMG/M
3300031945|Ga0310913_11116762All Organisms → cellular organisms → Bacteria → Acidobacteria550Open in IMG/M
3300031947|Ga0310909_10681443All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium855Open in IMG/M
3300032076|Ga0306924_12352863All Organisms → cellular organisms → Bacteria → Acidobacteria539Open in IMG/M
3300032174|Ga0307470_11146400All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium628Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil17.04%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil14.07%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere5.19%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil4.44%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere4.44%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil3.70%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere3.70%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere3.70%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment2.22%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil2.22%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil2.22%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil2.22%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil2.22%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil2.22%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil2.22%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil2.96%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere2.96%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere2.96%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil1.48%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere1.48%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere1.48%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere1.48%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere1.48%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere1.48%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Lake → Sediment → Freshwater Sediment0.74%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil0.74%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil0.74%
Sugarcane Root And Bulk SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil0.74%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil0.74%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil0.74%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere0.74%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere0.74%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere0.74%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere0.74%
Corn, Switchgrass And Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere0.74%
Sugarcane Root And Bulk SoilHost-Associated → Plants → Rhizome → Unclassified → Unclassified → Sugarcane Root And Bulk Soil0.74%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.74%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere0.74%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000364Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300000559Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemlyEnvironmentalOpen in IMG/M
3300000955Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300003267Sugarcane bulk soil Sample L1EnvironmentalOpen in IMG/M
3300003322Sugarcane root Sample L2Host-AssociatedOpen in IMG/M
3300004114Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5EnvironmentalOpen in IMG/M
3300004479Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAsEnvironmentalOpen in IMG/M
3300004643Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3EnvironmentalOpen in IMG/M
3300005171Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126EnvironmentalOpen in IMG/M
3300005176Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128EnvironmentalOpen in IMG/M
3300005177Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139EnvironmentalOpen in IMG/M
3300005178Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137EnvironmentalOpen in IMG/M
3300005179Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133EnvironmentalOpen in IMG/M
3300005289Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2Host-AssociatedOpen in IMG/M
3300005293Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1Host-AssociatedOpen in IMG/M
3300005331Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaGHost-AssociatedOpen in IMG/M
3300005334Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2Host-AssociatedOpen in IMG/M
3300005341Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaGEnvironmentalOpen in IMG/M
3300005343Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaGEnvironmentalOpen in IMG/M
3300005437Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaGEnvironmentalOpen in IMG/M
3300005438Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaGEnvironmentalOpen in IMG/M
3300005444Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaGEnvironmentalOpen in IMG/M
3300005459Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2Host-AssociatedOpen in IMG/M
3300005518Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaGEnvironmentalOpen in IMG/M
3300005552Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150EnvironmentalOpen in IMG/M
3300005553Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144EnvironmentalOpen in IMG/M
3300005559Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149EnvironmentalOpen in IMG/M
3300005576Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157EnvironmentalOpen in IMG/M
3300005578Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2Host-AssociatedOpen in IMG/M
3300005598Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155EnvironmentalOpen in IMG/M
3300005615Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaGEnvironmentalOpen in IMG/M
3300005713Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)EnvironmentalOpen in IMG/M
3300005719Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2Host-AssociatedOpen in IMG/M
3300005842Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2Host-AssociatedOpen in IMG/M
3300005844Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2Host-AssociatedOpen in IMG/M
3300006755Agricultural soil microbial communities from Georgia to study Nitrogen management - GA PlitterEnvironmentalOpen in IMG/M
3300006796Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114EnvironmentalOpen in IMG/M
3300006797Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108EnvironmentalOpen in IMG/M
3300006800Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109EnvironmentalOpen in IMG/M
3300006804Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200EnvironmentalOpen in IMG/M
3300006904Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3Host-AssociatedOpen in IMG/M
3300006914Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5Host-AssociatedOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009089Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaGEnvironmentalOpen in IMG/M
3300009093Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaGHost-AssociatedOpen in IMG/M
3300009098Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaGHost-AssociatedOpen in IMG/M
3300009101Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaGHost-AssociatedOpen in IMG/M
3300009143Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2EnvironmentalOpen in IMG/M
3300009148Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaGHost-AssociatedOpen in IMG/M
3300009177Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaGHost-AssociatedOpen in IMG/M
3300010036Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26EnvironmentalOpen in IMG/M
3300010046Tropical forest soil microbial communities from Panama - MetaG Plot_36EnvironmentalOpen in IMG/M
3300010323Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300010366Tropical forest soil microbial communities from Panama - MetaG Plot_24EnvironmentalOpen in IMG/M
3300010391Freshwater sediment microbial communities from Lake Superior, USA - Station SU-17. Combined Assembly of Gp0155404, Gp0155335, Gp0155336, Gp0155336, Gp0155403, Gp0155406EnvironmentalOpen in IMG/M
3300010396Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2EnvironmentalOpen in IMG/M
3300010397Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4EnvironmentalOpen in IMG/M
3300010400Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2EnvironmentalOpen in IMG/M
3300010401Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1EnvironmentalOpen in IMG/M
3300011119Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaGHost-AssociatedOpen in IMG/M
3300011270Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaGEnvironmentalOpen in IMG/M
3300011436Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT642_2EnvironmentalOpen in IMG/M
3300012096Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaGEnvironmentalOpen in IMG/M
3300012200Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012201Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012207Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaGEnvironmentalOpen in IMG/M
3300012210Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012211Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012212Combined assembly of Hopland grassland soilHost-AssociatedOpen in IMG/M
3300012355Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaGEnvironmentalOpen in IMG/M
3300012357Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaGEnvironmentalOpen in IMG/M
3300012685Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaGEnvironmentalOpen in IMG/M
3300012922Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaGEnvironmentalOpen in IMG/M
3300012923Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaGEnvironmentalOpen in IMG/M
3300012925Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012929Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012944Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012958Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MGEnvironmentalOpen in IMG/M
3300012971Tropical forest soil microbial communities from Panama - MetaG Plot_1EnvironmentalOpen in IMG/M
3300012972Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300012989Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MGEnvironmentalOpen in IMG/M
3300013308Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaGHost-AssociatedOpen in IMG/M
3300014157Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300014166Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015EnvironmentalOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300015372Soil combined assemblyHost-AssociatedOpen in IMG/M
3300015373Combined assembly of cpr5 rhizosphereHost-AssociatedOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300018000Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_coexEnvironmentalOpen in IMG/M
3300018054Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1EnvironmentalOpen in IMG/M
3300018071Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1EnvironmentalOpen in IMG/M
3300018433Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116EnvironmentalOpen in IMG/M
3300018468Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111EnvironmentalOpen in IMG/M
3300020001Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1a2EnvironmentalOpen in IMG/M
3300024246Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK21EnvironmentalOpen in IMG/M
3300025315Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)Host-AssociatedOpen in IMG/M
3300025899Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025911Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025918Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025934Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025941Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025942Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025945Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026088Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026318Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128 (SPAdes)EnvironmentalOpen in IMG/M
3300026320Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm (SPAdes)EnvironmentalOpen in IMG/M
3300026557Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungalEnvironmentalOpen in IMG/M
3300027775Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control (SPAdes)EnvironmentalOpen in IMG/M
3300027882Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027903Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)EnvironmentalOpen in IMG/M
3300028536Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300031740Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05EnvironmentalOpen in IMG/M
3300031945Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082EnvironmentalOpen in IMG/M
3300031947Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000HEnvironmentalOpen in IMG/M
3300032076Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)EnvironmentalOpen in IMG/M
3300032174Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
INPhiseqgaiiFebDRAFT_10547559913300000364SoilDHLRSRYNLAFVSTNKKRDGTTRKLKIELAQSAQRSKDRLVVKARRSYVAPGN*
F14TC_10095979033300000559SoilTFQTLIDHLRSRYNLAFVSTNKKRDGSTRKLKLDVAGPDQPAKSKLVVKARRSYVAPKG*
JGI1027J12803_10520195713300000955SoilILTDKPGKLETTFQTLIDHLRSRYNLAFVSTNKTRDGSTRKLKLDVTAPNQPAKSKLVVKARRTYVAPKG*
soilL1_1001431733300003267Sugarcane Root And Bulk SoilLAFVSTNKQRDGTTRKLRLDIDPARQKSKDKLVIKARRSYIAPRS*
rootL2_1027148533300003322Sugarcane Root And Bulk SoilLAFVSTNKKRDGTTRKLKLDIDPGRQKSRDKLVIKARRSYIAPRS*
Ga0062593_10294150723300004114SoilENLETSFNTLVEHLRTRYNLAFVSSNKKRDGTLRKLKIDLTEGTKKKQQTRLVVKARRSYIAPRS*
Ga0062595_10170937313300004479SoilLAFVSTNKNRDGTTRKLRLDVTPAIQNSKGKLVIKARRSYVAPRS*
Ga0062591_10224096913300004643SoilETTFNTLIEHLRTRYNLAFVSSNKKRDGSLRKLKIDLVDGAKKKQQVKLVVKARRSYVAPKS*
Ga0066677_1020651613300005171SoilNTTFQTLMDHLRSRYNLAFVSSNKKRDGTTRKLKIDVSPSLQKSQTKLVVKARRSYVAPRT*
Ga0066677_1055141913300005171SoilGELLADKPENLDTTFQTLMDHLRSRYNLAYVSTNKKRDGTTRELKLDVAPNLQKPQSKLVVKARRSYVAPRD*
Ga0066679_1004157633300005176SoilDHLRSRYNLAFVSTNKKRDGTTRKLKLDVAPNLQKSPGKLVVKARRSYVAPRS*
Ga0066690_1014742713300005177SoilRSRYNLAFVSSNKKRDGTTRKLKIDVSPSLQKSQTKLVVKARRSYVAPRT*
Ga0066690_1091682513300005177SoilLGATFQTLMDHLRSRYNLAYVSTNKKRDGTTRKLKLDLSQPIQKSQGKLVVKARRSYVAPRT*
Ga0066688_1058390923300005178SoilNTTFQTLMDHLRSRYNLAFVSSNKKRDGTTRKLKLDVAPTAQKSESKLVVTARRSYVAPKQ*
Ga0066684_1024950933300005179SoilDNLGTTFQTLMDHLRSRYNLAYVSTNKKRDGTTRKLKLDLSQPIQKSQGKLVVKARRSYVAPRT*
Ga0065704_1032813113300005289Switchgrass RhizosphereTTFQQLMDHLRSRYNLAFVSSNKKRDGTTRKLKIDMASGLQKQGKLVVKARRSYVAPR*
Ga0065715_1057270623300005293Miscanthus RhizosphereMEHLANETGGEVLADKPEKLDTTLARYNLAFVSTNKQRDGTTRKLKLDLDPPRQKSQGKLVIKARR
Ga0070670_10113220333300005331Switchgrass RhizosphereDHLRSRYNLAFVSTNKKRDGTTRRLKLDIDTARRQSQGKLVIKARRSYVAPPS*
Ga0070670_10169495213300005331Switchgrass RhizosphereFQTMIDHLRSRYNLAFVSTNKKRDGTTRKLKLDVDAAQQKSQVKLVVKARRTYISPREAR
Ga0068869_10097179633300005334Miscanthus RhizosphereRYNLAFVSTNKKRDGSLRKLKVDLSPEVLKSQGKLVVKARRSYIAPKQ*
Ga0070691_1051219813300005341Corn, Switchgrass And Miscanthus RhizosphereTRYNLAFVSSNRKRDGSTRQLKIDLAPATQKAKGKLVVKARRSYVAPGN*
Ga0070687_10077570313300005343Switchgrass RhizosphereLVSHLRTRYNLAFVSTNKKRDGTTRKLKIDMGQSAQKSRGKLVVKARRSYVAPRT*
Ga0070710_1078520123300005437Corn, Switchgrass And Miscanthus RhizosphereYLDIETLANETGGEILSDKPDNLSTTFQTLMDHLRSRYNLAFVSTNKKRDGTTRKLKIDMQPQLSRSQGQLVVKARRSYVAPK*
Ga0070701_1101069213300005438Corn, Switchgrass And Miscanthus RhizosphereKLGPTFQTLIDHLRSRYNLAFVSTNKNRDGTTRKLKLDIDQARQKSQGKLVIKARRRYIAPRS*
Ga0070694_10076988213300005444Corn, Switchgrass And Miscanthus RhizosphereYNLAFVSSNKKRDGTMRKLKIDLTPDAQKSNGKLVVKARRGYIAPKE*
Ga0070694_10078981423300005444Corn, Switchgrass And Miscanthus RhizosphereIDHLRSRYNLAFVSTNKKRDGTTRKLKLDIDAARQKSQDKLVIKARRSYISPRS*
Ga0068867_10039026913300005459Miscanthus RhizosphereYNLAFVSTNKNRDGTTRKLNLDIDRARQKSQGKLVIKARRSYISPRS*
Ga0068867_10131994513300005459Miscanthus RhizosphereKPEKLDTTFQTMIDHLRSRYNLAFVSTNKKRDGTTRKLKLDVDAAQQKSPGKLVVKARRTYISPREAR*
Ga0070699_10085268833300005518Corn, Switchgrass And Miscanthus RhizosphereLRTRYNLAFTSTNKNRDGTTRKLKIDVGAPAQKTKGKLVVKARRSYVAPKS*
Ga0066701_1014189033300005552SoilFQTLMDHLRSRYNLAFVSTNRKRDGTTRKLKVDVSAPAQKSQSKLIVKARRSYVAPRS*
Ga0066695_1072408313300005553SoilFQTLIDHLRSRYNLAFVSTNKKRDGATRQLKLDVSAPNQPPKTKLVVKARRSYVAPRN*
Ga0066700_1115374913300005559SoilTGGEVLEDKPENLNTTFQTLMDHLRSRYNLAFVSSNKKRDGTTRKLKIDVSPSLQRSQSKLVVKARRSYVAPR*
Ga0066708_1051299713300005576SoilNETGGEVLEDKPENLNTTFQTLMDHLRSRYNLAFVSSNKKRDGTTRKLKIDVSPSLQKSPGKLVVKARRSYVAPRR*
Ga0066708_1082017313300005576SoilYNLAYVSTNKKRDGTTRKLKLDLSQPIQKSQGKLVVKARRSYVAPRT*
Ga0068854_10063286523300005578Corn RhizosphereSLAFVSTNKARDGSVRKLKIELKPAVQKSRGNLVVKARRSYVAPRG*
Ga0066706_1096656423300005598SoilTTFQTLMDHLRSRYNLAFVSSNKKRDGSTRKLKLDVSPPLQKSQGKLVVKARRSYVAPRR
Ga0070702_10131433523300005615Corn, Switchgrass And Miscanthus RhizosphereLRSRYNLAFVSTNKNRDGTTRKLRLDVTPAMQDSKGKMVIKARRSYIAPRS*
Ga0066905_10198181023300005713Tropical Forest SoilNLAFVSTNKNRDGTTRKLRLDVTPAIQNSKGKMVIKARRSYIAPRS*
Ga0068861_10021098333300005719Switchgrass RhizosphereTFQTLIDHLRSRYNLAFVSTNKNRDGTTRKLKLDIDQARQKSQGKLVIKARRRYIAPRS*
Ga0068858_10019647413300005842Switchgrass RhizosphereMDHLRSRYNLAFVSTNKKRDGTTRKLKIDLAQSAQKSKDRLVVKARRSYIAPGS*
Ga0068862_10057627423300005844Switchgrass RhizosphereGKLETTFQTLIDHLRSRYNLAFVSTNKKRDGSIRKLKLDVTAPVQPAKSKVVVKARRSYVAPKG*
Ga0079222_1261982613300006755Agricultural SoilNLETTFNKLIEHLRTRYNLAFVSSNKKRDGTLRKLKIDLAAATKKKQQAKLVVKARRSYIAPKS*
Ga0066665_1041930323300006796SoilRSRYNLAFVSTNRKRDGTTRKLKVDVSAPAQKSESKLIVKARRSYVAPRS*
Ga0066659_1104537913300006797SoilANETGGEVLEDKPENLNTTFQTLMDHLRSRYNLAFVSSNKKRDGTTRKLKIDVSPSLQRSQSKLVVKARRSYVAPR*
Ga0066659_1192530213300006797SoilKLANETGAGVLRDKPENLDATFNTLINHLRNRYSLAFLSSNKKRDGALRKLKIDIMPAAQKSQGKLVVRGRKSYVAPRS*
Ga0066660_1006478713300006800SoilGEVLEDKPENLNTTFQTLMDHLRSRYNLAFVSSNKKRDGTTRKLKIDISPSLQRSQSKLVVKARRSYVAPR*
Ga0066660_1127933113300006800SoilGEVLEDKPENLNTTFQTLMDHLRSRYNLAFVSSNKKRDGTTRKLKIDVSPSLQKSQTKLVVKARRSYVAPRT*
Ga0079221_1036103913300006804Agricultural SoilKPENLETSFNTLIEHLRTRYNLAFVSSNKKRDGSLRKLKIDLTDGTKKKQQTKLIVKARRSYIAPRS*
Ga0075424_10070870213300006904Populus RhizosphereHLRTRYNLAFVSSNKKRDGTLRKLKIDLAPATKKSQTKLAVKARKSYVAPKG*
Ga0075436_10063973613300006914Populus RhizosphereKPENLTTTFTTLIEHLRTRYNMAFVSSNKKRDGTLRKLKIELASARKKTQKDLVVKARRSYVAPKS*
Ga0066710_10452804313300009012Grasslands SoilNLGTTFQTLMDHLRSRYNLAYVSTNKKRDGTTRKLKLDLSPPVQKSQGKLVVKARRSYVAPRT
Ga0099828_1058306013300009089Vadose Zone SoilTLMDHLRSRYNLAFVSSNKKRDGTTRKLKIDVSPPLQKSETKLVVKARRSYVAPRS*
Ga0105240_1232046613300009093Corn RhizosphereKPENLDTTFLTLIEHLRTRYNLAFVSSNKKRDGTVRKLKVELADNAKKTHDKLVVKARKNYVAPKS*
Ga0105245_1122756323300009098Miscanthus RhizosphereDHLRSRYNLAFVSTNRKRDGTTRKLKIELAQSAQKSKDKLVIKARRSYIAPGS*
Ga0105245_1252557713300009098Miscanthus RhizosphereNLSITFQTLMDHLRSRYNLAFVSTNKKRDGTTRKLKIDLAQSAQKSKDRLVVKARRSYIAPGS*
Ga0105247_1061666913300009101Switchgrass RhizosphereLIDHLRSRYNLAFVSTNKQRDGSTRKLKLDVTAPNQPAKSKLVVKSRRTYVAPKG*
Ga0099792_1038680013300009143Vadose Zone SoilYNLAFVSSNKKRDGTTRKLKVDLSSSTQKSQAKLVVKARRSYVAPTR*
Ga0105243_1050593213300009148Miscanthus RhizosphereSRYNLAFVSTNKKRDGTTRKLKLDIDPARQKSQRKLVIKARRSYISPRS*
Ga0105248_1235079813300009177Switchgrass RhizosphereTTFQTLIDHLRSRYNLAFTSTNKKRDGSTRKLKLDVTAVNQPAKSKLVVKARRSYVAPRS
Ga0105248_1296684013300009177Switchgrass RhizosphereYNLAFVSTNKNRDGTTRKLKLDIDPARQKSQGKLVIKARRSYIAPRS*
Ga0126305_1004185413300010036Serpentine SoilHLRTRYNIAFVSSNKKRDGTLRKLKIELADSTKKTQGKLVVKARRSYVAPKS*
Ga0126384_1051278123300010046Tropical Forest SoilLETTFQTLIDHLRSRYNLAFVSTNKKRDGTTRRLKLDVTAPNQPPKTKLVVKARRTYIAPRS*
Ga0134086_1026199213300010323Grasslands SoilNLAFVSSNKKRDGSTRKLKIDVSPSPQKSQSKLVVKARRSYVAPRR*
Ga0126379_1336811413300010366Tropical Forest SoilTFDTLMDHLRSRYNLAFVSTNKKRDGTTRKLKVDVQQNLQRSQGKLVVKARRSYVAPRG*
Ga0136847_1357545323300010391Freshwater SedimentFQTLMDHLRSRYNLAFVSSNKKRDGTTRKLKIDVAEPLQKSQGKLVVKARRSYVAARR*
Ga0134126_1271513223300010396Terrestrial SoilDHLRSRYNLAFVSTNKKRDGTTRKLKVDLSPPVQKSQGKLVVKARRSYVAPR*
Ga0134124_1030108613300010397Terrestrial SoilLAFVSTNKNRDGTTRKLKLDIDPARQKSQGKLVIKARRRYIAPRS*
Ga0134124_1257952613300010397Terrestrial SoilKPAKLDITFQTLIDHLRSRYNLAFVSTNKKRDGTTRKLKLDIDPVRQGSQRKLVIKARRSYISPRS*
Ga0134122_1136748323300010400Terrestrial SoilIDHLRSRYNLAFVSTNKQRDGTTRKLKLDLEPARQNSQGKLVIKARRSYIAPRR*
Ga0134122_1159200713300010400Terrestrial SoilTFQTLMEHLRSRYNLAFVSSNKKRDGTTRKLKIDLASSSQKSQGKLVVKARRSYVAPR*
Ga0134121_1229392913300010401Terrestrial SoilNMAFVSTNKKRDGTTRKLKLDVDPARQKLPGKLVIKARRSYVAPRR*
Ga0105246_1007732813300011119Miscanthus RhizosphereGEVLANKPEKLDTTFQTLIDHLRSRYNLAFVSTNKKRDGTTRKLKLDIDRARQQSQRKLVIKARRSYLSPRS*
Ga0105246_1131708813300011119Miscanthus RhizospherePEKLDTTFQTLIDHLRSRYNLAFVSTNKQRDGTTRKLKLDIDPARQQSQRKLVIKARRSYLSPRS*
Ga0137391_1118892413300011270Vadose Zone SoilHLRSRYNLAFVSSNKKRDGTTRKLKIDMAPGLQKQGKLVVKARRSYVAPRT*
Ga0137458_105064013300011436SoilMTHLRSRYNLAFVSSNKKRDGGTRKLRIDVVEPLQKSQGKLVVKARRSYVAPRR*
Ga0137389_1002704913300012096Vadose Zone SoilLADKPENLNTTFQTLMDHLRSRYNLAFVSSNKKRDGATRKLKIDVSPSLQKSQTRLVVKARRSYVAPRS*
Ga0137382_1037174723300012200Vadose Zone SoilANETGGEILSDKPENLNTTFQTLMDHLRSRYNLAYVSTNKNRDGTTRKLKLDLQPNVQKSEGKLVIKSRRSYVAPRS*
Ga0137365_1010327113300012201Vadose Zone SoilDKPENLRSTFNTLIEHLRTRYNLAFVSSNKKRDGTMRKLKIDVAEATQKSQGSKLVVRARRSYVAPRS*
Ga0137381_1023312013300012207Vadose Zone SoilEVLEDKPENLNTTFQTLMDHLRSRYNLAFVSSNKKRDGTTRKLKIDVSPSLQKSQSKLVVKARRSYVAPRR*
Ga0137381_1076158423300012207Vadose Zone SoilFNTLIEHLRTRYNLAFVSSNKKRDGTMRKLKIDVAEATQKSQGSKLVVRARRSYVAPRS*
Ga0137378_1046495413300012210Vadose Zone SoilTLMDHLRSRYNLAFVSSNKKRDGTTRKLKIDVSPSLQKSQSKLVVKARRSYVAPRR*
Ga0137377_1157060413300012211Vadose Zone SoilTRYNLAFVSSNKKRDGTMRKLKIDVAETTQKSQRKLVVRARRSYVAPRS*
Ga0150985_11199519813300012212Avena Fatua RhizosphereLRSRYNLAFISTNKKRDGTTRKLKIELGQAAQKSKDKLVVKARRSYIAPGS*
Ga0137369_1100864113300012355Vadose Zone SoilMDHLRSRYNLAFVSSNKKRDGTIRKLKIDVTPSLQKSEGKLVVKARQSYVAPRQ*
Ga0137384_1002126763300012357Vadose Zone SoilEDKPENLRSTFNTLIEHLRTRYNLAFVSSNKKRDGTMRKLKIDVAEATQKSQGSKLVVRARRSYVAPRS*
Ga0137397_1042339713300012685Vadose Zone SoilTFQTLMDHLRSRYNLAFVSSNKKRDGTTRKLKIDVAAPAAQKSQAQLVVKARRTYVAPRR
Ga0137394_1096456413300012922Vadose Zone SoilHLRSRYNLAFVSTNKKRDGTTRKLKLDLAPSIRKSQGKMVVKARRTYIAPRN*
Ga0137359_1015733913300012923Vadose Zone SoilLRSRYNLAFVSSNKRRDGTTRKLKIDVSPSLQKSQTRLVVKARRSYVAPRS*
Ga0137359_1053846613300012923Vadose Zone SoilTFQTLMDHLRSRYNLAFVSSNKKRDGTTRKLKVDLAPAAQKSPARLVVKARRSYVAPSR*
Ga0137419_1126312513300012925Vadose Zone SoilNLAFVSTNKKRDGTTRRLKLDLAPSIPKSQGKLVIKARRSYIAPRN*
Ga0137404_1180010023300012929Vadose Zone SoilRSRYNLAFVSTNKKRDGTTRKLRLDLTPPIQKSNGKSVIKARRSYIAPRG*
Ga0137410_1078575723300012944Vadose Zone SoilYNLAFVSSNKKRDGSTRKLKIDLTRPAPDPKDKLVVKARRSYVAPRK*
Ga0164299_1102670213300012958SoilVNKVVAASYMDLEHLANETGGEVLGNKPEKLDTTFQTMIDHLRSRYNLAFVSTNKKRDGTTRKLKLDVDSAQQKSQGKLVVKARRTYISPREVR*
Ga0126369_1036234633300012971Tropical Forest SoilYNLAFVSTNKKRDGTTRKLKLDVNAPNQPPKTKLVVKARRNYVAPRS*
Ga0134077_1015854423300012972Grasslands SoilQTLMDHLRSRYNLAFVSSNKKRDGSTRKLKIDVSPSPQKSQSKLVVKARRSYVAPRR*
Ga0164305_1038379523300012989SoilLAFVSTNKKRDGTTRKLKLDIDPVQQKSQGKMVIKARRSYISPRS*
Ga0157375_1223826613300013308Miscanthus RhizosphereKPEKLDTTFQTLIDHLRSRYNLAFVSTNKKRDGTTRKLKLDIDPARQQSQRKLVIKARRSYLSPRS*
Ga0134078_1058967113300014157Grasslands SoilHLRSRYNLAFVSTNKKRDGTTRKLKLDLSQPVQKSQGKSVVKARRSYVAPR*
Ga0134079_1065923423300014166Grasslands SoilMDHLRSRYNLAFVSSNKKRDGTTRKLKIDVAPPLQKTQGKLVVKARRSYVAPRS*
Ga0132258_10033806133300015371Arabidopsis RhizosphereLIDHLRSRYNLAFVSTNKNRDGTTRKLKLDIDPARQKSQGKLVIKARRTYISPRS*
Ga0132256_10043548213300015372Arabidopsis RhizosphereSRYNLAFVSTNKNRDGTTRKLKLDIDPARQKSQGKLVIKARRRYIAPRS*
Ga0132256_10301648523300015372Arabidopsis RhizosphereRSRYNLAFVSTNKKRDGTTRKLKLDLAQPIQKSQGKLVVKARRSYVAPRF*
Ga0132257_10016216613300015373Arabidopsis RhizosphereNHLRTRYNLAFVSTNKKRDGTTRKLKIEMGQSAQKAKGKLVVKARRSYVAPRT*
Ga0132257_10086503633300015373Arabidopsis RhizosphereYNMAFVSTNKKRDGTTRKLKLNVEPARQKSQGKLVIKARRSYISPRS*
Ga0132255_10063862213300015374Arabidopsis RhizosphereLRSRYNLAFVSTNKKRDGTTRKLKLDIHPAGQKSQGKLVIKARRSYISPRS*
Ga0132255_10493615823300015374Arabidopsis RhizosphereTRYNLAFVSSNKKRDGTLRKLKIELAPATKKTQTKLVVKARKSYVAPRD*
Ga0184604_1007253413300018000Groundwater SedimentRSRYNLAFVSTNKKRDGTRRNLKLDVGPRNQKGKLVVKTRRSYIAPRR
Ga0184621_1033218213300018054Groundwater SedimentRYNLAYVSSNTKRDGAMRKLKIDMTPTLQKPGKLVVKARRSYVAPRQ
Ga0184618_1033688413300018071Groundwater SedimentNLNTTFNTLINHLRTRYNLAFVSSNKARDGAMRKLKVDVASVAQKKGKLVVKARRSYVAPKK
Ga0066667_1071736123300018433Grasslands SoilLQNLANETGGEVLQDKPENLDTTFNTLINHLRIRYNLAFVSSNKKRDGALRKLKIDLAPAAQKSQGKLVVKARKSYVAPRS
Ga0066662_1044456223300018468Grasslands SoilLRSRYNLAFVSSNKKRDGTTRKLKIDVSPSLQKSQTKLVVKARRSYVAPRT
Ga0066662_1068412123300018468Grasslands SoilMDHLRSRYNLAFVSSNKKRDGSTRKLKIDVSPSLQKSQSKLVVKARRSYVSPRR
Ga0193731_109627423300020001SoilLRSRYNLAFVSTNKKRDGAKRKLKLDLTPTIQKSNGKLVIKARRSYIAPRG
Ga0247680_107301213300024246SoilDKPENLDTTFQTLMDHLRSRYNLAYVSTNKKRDGATRKLKLDLSPPVQKSQGKLVVKARRSYVAPRS
Ga0207697_1020806023300025315Corn, Switchgrass And Miscanthus RhizosphereHLRTRYNFSFVSTNKKRDGTVRKLKIDLADGIEKSQGRLVVKARRSYVAPKE
Ga0207642_1062797813300025899Miscanthus RhizosphereYNLAFVSTNKRRDGATRKLRLDLTPTIQKSKGRMVIRARRSYIAPRN
Ga0207654_1144575323300025911Corn RhizosphereTTFATLVSHLRTRYNLAFVSTNKKRDGTTRKLKIDMGQSAQKSRGKLVVKARRSYVAPRT
Ga0207662_1076256733300025918Switchgrass RhizosphereTLVSHLRTRYNLAFVSTNKKRDGTTRKLKIDMGQSAQKSRGKLVVKARRSYVAPRT
Ga0207686_1050296313300025934Miscanthus RhizosphereYNLAFVSTNKKRDGTTRKLKIELAQSAQKSKDRLVVKARRSYVAPGN
Ga0207711_1089657923300025941Switchgrass RhizosphereEILTDKAGKLETTFQTLIDHLRSRYNLAFVSTNKQRDGSTRKLKLDVTAPNQPAKSKLVVKSRRTYVAPKG
Ga0207689_1008080513300025942Miscanthus RhizosphereNLAFVSTNKQRDGTTRKLKLDIDPARQKSQGKLVIKARRRYIAPRS
Ga0207679_1120725013300025945Corn RhizosphereLDHTFNTLITHLRTRYNFSFVSTNKKRDGTVRKLKIDLADGIEKSQGRLVVKARRTYVAPKE
Ga0207641_1029897333300026088Switchgrass RhizosphereTTFQTLIDHLRSRYNLAFVSTNKQRDGSTRKLKLDVTAPNQPAKSKLVVKSRRTYVAPKG
Ga0209471_103120413300026318SoilDHLRSRYNLAFVSTNKKRDGTTRKLKLDVAPNLQKSPGKLVVKARRSYVAPRS
Ga0209131_108926243300026320Grasslands SoilLMDHLRSRYNLAFVSSNKKRDGTTRKLKIDLAPSTQKSQARLVVKARRSYVAPSR
Ga0179587_1083495313300026557Vadose Zone SoilFQTLMDHLRSRYNLAFVSSNKKRDGTTRKLKIDLAPSTQKSQARLVVKARRSYVAPSR
Ga0209177_1045013223300027775Agricultural SoilETSFNTLIEHLRTRYNLAFVSSNKKRDGTLRKLKIDLTEHTKKKQQTKLVVKARRSYIAPRS
Ga0209590_1094242523300027882Vadose Zone SoilVLVDKPENLNTTFQTLMDHLRSRYNPAFVSSNKKRDGTTRKLRIDVSPALQKSQTKLVVKARRSYVAPRS
Ga0209488_1094268413300027903Vadose Zone SoilELLTEKPENLNITFQTLMDHLRSRYNLAFVSSNKKRDGTTRKLKIDVSPALQKSQGKLVVKARRSYVAPRS
Ga0137415_1132950613300028536Vadose Zone SoilELLRDKPENLNTTFQTLMDHLRSRYNLAFVSSNKKRDGTTRKLKIDMAPGLQKQGKLVVKARRSYVAPRR
Ga0307468_10100516913300031740Hardwood Forest SoilDHLRSRYNLAYVSTNKKRDGTTRKLKLDIQPTARSQGKLVVKARRSYVAPRS
Ga0310913_1111676213300031945SoilRSRYNLAFVSTNKKRDGTTRRLKVDVQPSLSDTEGKLVVKAKRSYVAPRT
Ga0310909_1068144313300031947SoilYNLAFVSTNKKRDGTTRRLKVDVQPSLSDTEGKLVVKAKRSYVAPRT
Ga0306924_1235286313300032076SoilTTFQTLIDHLRSRYNLAFVSTNKKRDGTTRRLKVDVQPSLSDSEGKLVVKAKRSYVAPRT
Ga0307470_1114640023300032174Hardwood Forest SoilHLRSRYNLAFVSTNKKRDGTTRKLQVDVQQPSQRSQSKLVVKARRSYVAPRS

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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