Metagenome / Metatranscriptome Family F057976

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F057976
Family Type	Metagenome / Metatranscriptome
Number of Sequences	135
Average Sequence Length	50 residues
Representative Sequence	PQGVLHGANEAFRAEFQARRTPGMRRTRTGIGVDTYRPLNVSPEFARMTG
Number of Associated Samples	108
Number of Associated Scaffolds	135

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	8.15 %
% of genes near scaffold ends (potentially truncated)	91.11 %
% of genes from short scaffolds (< 2000 bps)	94.07 %
Associated GOLD sequencing projects	102
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.57

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (81.481 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (40.000 % of family members)
Environment Ontology (ENVO)	Unclassified (47.407 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (39.259 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 20.51% β-sheet: 17.95% Coil/Unstructured: 61.54%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.57
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.57
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 135 Family Scaffolds
PF02900	LigB	2.96
PF00857	Isochorismatase	2.96
PF00561	Abhydrolase_1	2.96
PF08028	Acyl-CoA_dh_2	2.22
PF02771	Acyl-CoA_dh_N	2.22
PF12587	DUF3761	2.22
PF00296	Bac_luciferase	2.22
PF01841	Transglut_core	2.22
PF01042	Ribonuc_L-PSP	1.48
PF06051	DUF928	1.48
PF01266	DAO	1.48
PF01343	Peptidase_S49	0.74
PF00903	Glyoxalase	0.74
PF03824	NicO	0.74
PF08379	Bact_transglu_N	0.74
PF03737	RraA-like	0.74
PF00378	ECH_1	0.74
PF04828	GFA	0.74
PF16901	DAO_C	0.74
PF03171	2OG-FeII_Oxy	0.74
PF02861	Clp_N	0.74
PF05860	TPS	0.74
PF02515	CoA_transf_3	0.74

COG ID	Name	Functional Category	% Frequency in 135 Family Scaffolds
COG1960	Acyl-CoA dehydrogenase related to the alkylation response protein AidB	Lipid transport and metabolism [I]	4.44
COG1335	Nicotinamidase-related amidase	Coenzyme transport and metabolism [H]	2.96
COG1535	Isochorismate hydrolase	Secondary metabolites biosynthesis, transport and catabolism [Q]	2.96
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	2.22
COG0251	Enamine deaminase RidA/Endoribonuclease Rid7C, YjgF/YER057c/UK114 family	Defense mechanisms [V]	1.48
COG0616	Periplasmic serine protease, ClpP class	Posttranslational modification, protein turnover, chaperones [O]	1.48
COG0542	ATP-dependent Clp protease, ATP-binding subunit ClpA	Posttranslational modification, protein turnover, chaperones [O]	0.74
COG0684	RNA degradosome component RraA (regulator of RNase E activity)	Translation, ribosomal structure and biogenesis [J]	0.74
COG1305	Transglutaminase-like enzyme, putative cysteine protease	Posttranslational modification, protein turnover, chaperones [O]	0.74
COG1804	Crotonobetainyl-CoA:carnitine CoA-transferase CaiB and related acyl-CoA transferases	Lipid transport and metabolism [I]	0.74
COG3210	Large exoprotein involved in heme utilization or adhesion	Intracellular trafficking, secretion, and vesicular transport [U]	0.74
COG3791	Uncharacterized conserved protein	Function unknown [S]	0.74

NCBI Taxonomy

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Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	81.48 %
Unclassified	root	N/A	18.52 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	81.48 %
Unclassified	root	N/A	18.52 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	81.48 %
Unclassified	root	N/A	18.52 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	68.89 %
Unclassified	root	N/A	18.52 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	66.67 %
Unclassified	root	N/A	18.52 %

Name	Rank	Taxonomy	Distribution
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	54.07 %
Unclassified	root	N/A	18.52 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.48 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1.48 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	54.07 %
Unclassified	root	N/A	18.52 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	0.74 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.74 %
Devosiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Devosiaceae	0.74 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	54.07 %
Unclassified	root	N/A	18.52 %
Ferruginivarius	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Ferruginivarius	0.74 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.74 %
Devosiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Devosiaceae	0.74 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	54.07 %
Unclassified	root	N/A	18.52 %
Ferruginivarius sediminum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Ferruginivarius → Ferruginivarius sediminum	0.74 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.74 %
Devosiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Devosiaceae	0.74 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300003505\|JGIcombinedJ51221_10085445	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1243	Open in IMG/M
3300005179\|Ga0066684_11103809	All Organisms → cellular organisms → Bacteria	507	Open in IMG/M
3300005332\|Ga0066388_100372536	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2074	Open in IMG/M
3300005536\|Ga0070697_100759947	All Organisms → cellular organisms → Bacteria	857	Open in IMG/M
3300006806\|Ga0079220_11467243	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	583	Open in IMG/M
3300007255\|Ga0099791_10058040	All Organisms → cellular organisms → Bacteria	1740	Open in IMG/M
3300007788\|Ga0099795_10365535	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	648	Open in IMG/M
3300007788\|Ga0099795_10502523	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	565	Open in IMG/M
3300009088\|Ga0099830_10868686	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Devosiaceae	745	Open in IMG/M
3300009089\|Ga0099828_11028971	Not Available	733	Open in IMG/M
3300009090\|Ga0099827_10298968	Not Available	1361	Open in IMG/M
3300009090\|Ga0099827_10352485	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1252	Open in IMG/M
3300009090\|Ga0099827_11287196	Not Available	636	Open in IMG/M
3300009090\|Ga0099827_11644064	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	559	Open in IMG/M
3300009137\|Ga0066709_101357204	All Organisms → cellular organisms → Bacteria	1038	Open in IMG/M
3300009137\|Ga0066709_102008586	Not Available	801	Open in IMG/M
3300010048\|Ga0126373_10224329	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1835	Open in IMG/M
3300010358\|Ga0126370_11235981	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	696	Open in IMG/M
3300010358\|Ga0126370_12249399	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	538	Open in IMG/M
3300010361\|Ga0126378_10412128	All Organisms → cellular organisms → Bacteria	1464	Open in IMG/M
3300010361\|Ga0126378_13443462	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	502	Open in IMG/M
3300010366\|Ga0126379_12922657	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	572	Open in IMG/M
3300010376\|Ga0126381_100484384	All Organisms → cellular organisms → Bacteria → Proteobacteria	1741	Open in IMG/M
3300010376\|Ga0126381_100489723	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1732	Open in IMG/M
3300010379\|Ga0136449_101244129	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1167	Open in IMG/M
3300010379\|Ga0136449_102687586	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	707	Open in IMG/M
3300011271\|Ga0137393_10422594	Not Available	1142	Open in IMG/M
3300012208\|Ga0137376_10506978	Not Available	1047	Open in IMG/M
3300012209\|Ga0137379_11049029	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	720	Open in IMG/M
3300012361\|Ga0137360_10335258	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1263	Open in IMG/M
3300012363\|Ga0137390_11069685	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	757	Open in IMG/M
3300012363\|Ga0137390_11848719	Not Available	534	Open in IMG/M
3300012469\|Ga0150984_121809008	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	817	Open in IMG/M
3300012923\|Ga0137359_10623274	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	945	Open in IMG/M
3300012925\|Ga0137419_10794509	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	774	Open in IMG/M
3300012930\|Ga0137407_10677917	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	970	Open in IMG/M
3300016270\|Ga0182036_10033090	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3098	Open in IMG/M
3300016270\|Ga0182036_10459934	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1002	Open in IMG/M
3300016319\|Ga0182033_10565794	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	984	Open in IMG/M
3300016319\|Ga0182033_10888972	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	788	Open in IMG/M
3300016319\|Ga0182033_11575496	Not Available	594	Open in IMG/M
3300016341\|Ga0182035_10227744	All Organisms → cellular organisms → Bacteria	1491	Open in IMG/M
3300016357\|Ga0182032_11170944	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	661	Open in IMG/M
3300016371\|Ga0182034_10624954	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	911	Open in IMG/M
3300016404\|Ga0182037_10068648	All Organisms → cellular organisms → Bacteria	2443	Open in IMG/M
3300016404\|Ga0182037_10273986	All Organisms → cellular organisms → Bacteria	1345	Open in IMG/M
3300016445\|Ga0182038_11495719	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	606	Open in IMG/M
3300016445\|Ga0182038_11643975	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	578	Open in IMG/M
3300017934\|Ga0187803_10050651	All Organisms → cellular organisms → Bacteria	1640	Open in IMG/M
3300017942\|Ga0187808_10240591	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	809	Open in IMG/M
3300020579\|Ga0210407_10557736	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	894	Open in IMG/M
3300021374\|Ga0213881_10310029	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	705	Open in IMG/M
3300021405\|Ga0210387_10082480	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2656	Open in IMG/M
3300021420\|Ga0210394_10946109	All Organisms → cellular organisms → Bacteria	748	Open in IMG/M
3300021439\|Ga0213879_10023687	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1492	Open in IMG/M
3300021441\|Ga0213871_10104298	All Organisms → cellular organisms → Bacteria → Proteobacteria	833	Open in IMG/M
3300021474\|Ga0210390_10947815	Not Available	706	Open in IMG/M
3300021477\|Ga0210398_10632391	Not Available	868	Open in IMG/M
3300022708\|Ga0242670_1025408	Not Available	736	Open in IMG/M
3300022712\|Ga0242653_1093229	All Organisms → cellular organisms → Bacteria	544	Open in IMG/M
3300022717\|Ga0242661_1145300	Not Available	528	Open in IMG/M
3300022726\|Ga0242654_10250518	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	635	Open in IMG/M
3300025627\|Ga0208220_1169504	Not Available	547	Open in IMG/M
3300025922\|Ga0207646_10292996	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1470	Open in IMG/M
3300026527\|Ga0209059_1233866	All Organisms → cellular organisms → Bacteria	616	Open in IMG/M
3300026538\|Ga0209056_10723252	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	504	Open in IMG/M
3300026552\|Ga0209577_10668210	Not Available	595	Open in IMG/M
3300027643\|Ga0209076_1167867	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	610	Open in IMG/M
3300027846\|Ga0209180_10443946	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	732	Open in IMG/M
3300027874\|Ga0209465_10433340	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	658	Open in IMG/M
3300027882\|Ga0209590_10707913	Not Available	644	Open in IMG/M
3300027986\|Ga0209168_10653890	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	501	Open in IMG/M
3300028906\|Ga0308309_11688629	Not Available	537	Open in IMG/M
3300029636\|Ga0222749_10628275	Not Available	587	Open in IMG/M
3300031057\|Ga0170834_100792282	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	563	Open in IMG/M
3300031231\|Ga0170824_104364609	Not Available	1610	Open in IMG/M
3300031469\|Ga0170819_13025274	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	618	Open in IMG/M
3300031474\|Ga0170818_113410599	All Organisms → cellular organisms → Bacteria	1275	Open in IMG/M
3300031543\|Ga0318516_10291135	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	944	Open in IMG/M
3300031543\|Ga0318516_10362016	Not Available	837	Open in IMG/M
3300031545\|Ga0318541_10141682	Not Available	1315	Open in IMG/M
3300031549\|Ga0318571_10357997	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	561	Open in IMG/M
3300031561\|Ga0318528_10265047	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	922	Open in IMG/M
3300031573\|Ga0310915_11038421	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	571	Open in IMG/M
3300031640\|Ga0318555_10206841	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1058	Open in IMG/M
3300031679\|Ga0318561_10246545	All Organisms → cellular organisms → Bacteria	973	Open in IMG/M
3300031679\|Ga0318561_10361804	Not Available	796	Open in IMG/M
3300031680\|Ga0318574_10576992	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	659	Open in IMG/M
3300031680\|Ga0318574_10912515	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	514	Open in IMG/M
3300031682\|Ga0318560_10382331	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	761	Open in IMG/M
3300031719\|Ga0306917_10096204	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2115	Open in IMG/M
3300031719\|Ga0306917_10613503	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	855	Open in IMG/M
3300031719\|Ga0306917_11522200	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	514	Open in IMG/M
3300031748\|Ga0318492_10331689	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	794	Open in IMG/M
3300031751\|Ga0318494_10468963	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	733	Open in IMG/M
3300031754\|Ga0307475_11227370	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	583	Open in IMG/M
3300031763\|Ga0318537_10266805	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	634	Open in IMG/M
3300031771\|Ga0318546_10318433	Not Available	1079	Open in IMG/M
3300031771\|Ga0318546_10613630	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	765	Open in IMG/M
3300031771\|Ga0318546_10677262	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	726	Open in IMG/M
3300031781\|Ga0318547_10690914	Not Available	634	Open in IMG/M
3300031781\|Ga0318547_10863196	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	564	Open in IMG/M
3300031782\|Ga0318552_10632344	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	546	Open in IMG/M
3300031792\|Ga0318529_10272304	Not Available	788	Open in IMG/M
3300031794\|Ga0318503_10165097	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	715	Open in IMG/M
3300031796\|Ga0318576_10375006	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	672	Open in IMG/M
3300031798\|Ga0318523_10449778	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	639	Open in IMG/M
3300031845\|Ga0318511_10302258	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	724	Open in IMG/M
3300031860\|Ga0318495_10291201	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	727	Open in IMG/M
3300031894\|Ga0318522_10187897	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	782	Open in IMG/M
3300031897\|Ga0318520_10868842	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	567	Open in IMG/M
3300031910\|Ga0306923_12274087	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	541	Open in IMG/M
3300031945\|Ga0310913_10469119	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	894	Open in IMG/M
3300031946\|Ga0310910_11056955	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	633	Open in IMG/M
3300031947\|Ga0310909_10056271	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3041	Open in IMG/M
3300031947\|Ga0310909_10671858	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	862	Open in IMG/M
3300031954\|Ga0306926_12182423	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	617	Open in IMG/M
3300031965\|Ga0326597_10029779	All Organisms → cellular organisms → Bacteria → Proteobacteria	6957	Open in IMG/M
3300032001\|Ga0306922_10182806	All Organisms → cellular organisms → Bacteria	2248	Open in IMG/M
3300032010\|Ga0318569_10411399	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	631	Open in IMG/M
3300032035\|Ga0310911_10291024	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	939	Open in IMG/M
3300032035\|Ga0310911_10298802	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	926	Open in IMG/M
3300032042\|Ga0318545_10341464	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	539	Open in IMG/M
3300032054\|Ga0318570_10240944	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	820	Open in IMG/M
3300032059\|Ga0318533_10434085	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	960	Open in IMG/M
3300032059\|Ga0318533_10876248	Not Available	659	Open in IMG/M
3300032065\|Ga0318513_10428948	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	646	Open in IMG/M
3300032091\|Ga0318577_10227716	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	892	Open in IMG/M
3300032094\|Ga0318540_10176148	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1028	Open in IMG/M
3300032174\|Ga0307470_10578954	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	835	Open in IMG/M
3300032205\|Ga0307472_102354684	All Organisms → cellular organisms → Bacteria	540	Open in IMG/M
3300032261\|Ga0306920_100810786	All Organisms → cellular organisms → Bacteria	1373	Open in IMG/M
3300032261\|Ga0306920_101636781	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	914	Open in IMG/M
3300033290\|Ga0318519_10351170	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	872	Open in IMG/M
3300033513\|Ga0316628_103234077	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Ferruginivarius → Ferruginivarius sediminum	592	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.52%
Host-Associated	Host-Associated	1.48%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	97.04%
Aquatic	Environmental → Aquatic	1.48%
Plants	Host-Associated → Plants	1.48%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	96.30%
Freshwater	Environmental → Aquatic → Freshwater	1.48%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.48%
Rock-Dwelling (Subaerial Biofilms)	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms)	0.74%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	91.11%
Loam	Environmental → Terrestrial → Soil → Loam	4.44%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.48%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.74%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified	0.74%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.74%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.74%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	60.00%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	25.19%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.44%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.96%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.48%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.48%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.74%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.74%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.74%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified	0.74%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.74%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.74%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	40.00%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	15.56%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	14.81%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	5.93%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.22%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.96%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.96%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.48%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	1.48%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.48%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.48%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.74%
Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Bulk Soil	0.74%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.74%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.74%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.74%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.74%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.74%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.74%
Exposed Rock	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Exposed Rock	0.74%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.74%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.74%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017934	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_3	Environmental	Open in IMG/M
3300017942	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300021374	Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R08	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021439	Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R03	Environmental	Open in IMG/M
3300021441	Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1	Host-Associated	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300022708	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022712	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-32-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022717	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-11-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022726	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025627	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-1 deep-092012 (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026527	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151 (SPAdes)	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300027643	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027986	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031469	Fir Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031549	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031794	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f23	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031860	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25	Environmental	Open in IMG/M
3300031894	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031965	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT100D185	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032042	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f26	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M
3300033513	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D5_C	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGIcombinedJ51221_100854451	3300003505	Forest Soil	ILHGANEAYRAEFQARRKPGMRRTSTSVGVDTYRPLRPSAEFARMNS*
Ga0066684_111038092	3300005179	Soil	HTPQGILHGADEAYRTEFQAKRKPDQRRTATNVGVDTYRPLIPSPEFTRMAG*
Ga0066388_1003725361	3300005332	Tropical Forest Soil	ADEAFRAEFQARRTTGMRRTRTGIGVDAYRPLSVSPEFARMTR*
Ga0070697_1007599471	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	PGNFRHTPQGILHGANEAYRAEFQARRKPGMRRTSTSVGVDTYQPLIPSAEFARMSG*
Ga0079220_114672431	3300006806	Agricultural Soil	TPQGILHGADEAYRAEFQARRKPGMRRTSTSVGVDTCRPLRASPEFAQMGR*
Ga0099791_100580401	3300007255	Vadose Zone Soil	FQAQRTPGMRRTRTGIGVDTYRALNVSPEFVRMTG*
Ga0099795_103655352	3300007788	Vadose Zone Soil	NFRHTPQGILHGANEAYRAEFQARRKPSMRRTSTSVGVDTYRPLRPSAEFARMSG*
Ga0099795_105025232	3300007788	Vadose Zone Soil	MRTLPDGRPGLFRHTPQGILHGAPEAYRTEFQKKREPSQRRTGTSVDTYRPLIPIPEFTKMAG*
Ga0099830_108686862	3300009088	Vadose Zone Soil	FRHTPQGILHGANEAYRAEFQARRKPGLRRTSTSVGVDTYRPLRPSPEFARMSGQL*
Ga0099828_110289712	3300009089	Vadose Zone Soil	MPQGILHGADEATRAEFQKKRQPGMRRTATNVGVDTYRPLNPIPEFVKLAG*
Ga0099827_102989681	3300009090	Vadose Zone Soil	GGFRHTPQGILHGATEAYRAEFQKKRKPGVHRTATMVGVDTYRPLNPTPEFARMAG*
Ga0099827_103524852	3300009090	Vadose Zone Soil	MPQGILHGADEATRAEFQARRQPGTRRTATNVGVDTYRPLTPTAEFVRIAG*
Ga0099827_112871962	3300009090	Vadose Zone Soil	AGRRPGMFRHTPQGILHGADEATRAEFQKHRKPGSHRTATMVGVDTYRPLTPTAEFARMAG*
Ga0099827_116440641	3300009090	Vadose Zone Soil	RRPGGFSFTPQGVLHGANEAFRAEFQARRRPGIRRTRTGIGVDTYRPLNVSPEFARMTG*
Ga0066709_1013572041	3300009137	Grasslands Soil	HTPQGILHGADEATRAEFQKRRQPGQRRTATNVGVDTYRPLIPSPEFAKMAG*
Ga0066709_1020085863	3300009137	Grasslands Soil	FRHTPQGILHGADEATRAEFQKRRQPGQRRTATNVGVDTYRPLTPTPEFAKMAG*
Ga0126373_102243293	3300010048	Tropical Forest Soil	ANEAFRAEFQAARSPGMRRTRTGIGVDTYRPLNVSPEFTRITG*
Ga0126370_112359811	3300010358	Tropical Forest Soil	DDPQGRRPGGFAFTPQGVLHGANEAFRAEFQAQRRPGMRRTRTGIGVDTYSPLSVSPEFARMTR*
Ga0126370_122493992	3300010358	Tropical Forest Soil	SFRHTPQGVPHGASDAYRAEFQARRKPGMRRTSTSVGVDTYRPLIPSAEFARMTA*
Ga0126378_104121284	3300010361	Tropical Forest Soil	GRRAGGFAFTPQGALHGANEAFRAEFQAQRRPGMRRTRTGIGVDTYRPLNASPEFARMTG
Ga0126378_134434622	3300010361	Tropical Forest Soil	FSFTPQGVLHGTNESFRAEFQAARTPGMRRTCTGIGVDTYRPLNVSPVFARMTR*
Ga0126379_129226572	3300010366	Tropical Forest Soil	NEAFRAEFQAQHTPGMRRTRTGIGVDTYRLLNVSPEFARMTG*
Ga0126381_1004843842	3300010376	Tropical Forest Soil	MQARRKPGVRRTSTMIGVDTYRPLRFSPQFVRMAG*
Ga0126381_1004897233	3300010376	Tropical Forest Soil	VLHGANEAFRAEFQAARTPGVRRTRTGIGVDTYLPLNVSPEFARMTG*
Ga0136449_1012441291	3300010379	Peatlands Soil	LHGADEATRAAFQARRKPGMRRTGTLIGVDSYRPLQPSAEFVRMSG*
Ga0136449_1026875861	3300010379	Peatlands Soil	MFRHTPQGILHGADEATRAEFQKKRKPGSHRTATMVGVDTYRPLNPTPEFKRMAG*
Ga0137393_104225942	3300011271	Vadose Zone Soil	PGMFRHTPQGILHGADEATRAEFQKHRKPGSHRTATMVGVDTYRPLTPTAEFAHMAG*
Ga0137376_105069781	3300012208	Vadose Zone Soil	HGANEAYHAEFQTKRQPGQRRTATNVGVDTYRPLIPSAEFVKMAN*
Ga0137379_110490292	3300012209	Vadose Zone Soil	PQGILHGADEATRAEFQKHRKPGSHRTATMVGVDTYRPLTPTPEFVRMAG*
Ga0137360_103352585	3300012361	Vadose Zone Soil	EFQAQRRPGMRRTRTGIGVDTYRPLNVSPEFARMTG*
Ga0137390_110696852	3300012363	Vadose Zone Soil	QARRTSGMRRTRTGIGVDTYRPLRVSPDFAQMTR*
Ga0137390_118487191	3300012363	Vadose Zone Soil	RRPGMFRHTPQGILHGADEAARAKFQKHRKPGSHRTATMVGVDTYRPLNPTPEFARMAG*
Ga0150984_1218090082	3300012469	Avena Fatua Rhizosphere	PQGILHGANEAYRAEFQARRKPGGRRTSTSVGVDTYRPLKPSPEFARMTG*
Ga0137359_106232743	3300012923	Vadose Zone Soil	FTPQGVLHGANEALRAEFQAQRRPGMRRTRTGIGVDTYRPLNVSPEFARMTG*
Ga0137419_107945091	3300012925	Vadose Zone Soil	AFRAEFQAQRTPGMRRTRTGIGVDTYRPLNVSPEFARMTG*
Ga0137407_106779172	3300012930	Vadose Zone Soil	AEFQAQRRPAMRRTRTGIGVDTYRPLNVSPEFARMTG*
Ga0182036_100330904	3300016270	Soil	FAFTPQGVLHGANEAFRAEFQARRSPGMRRTRTGIGVDTYRPLNVSPEFARMTG
Ga0182036_104599341	3300016270	Soil	EFQTRRTPGMRRTRTGIGVDTYRPLNVSPEFARMTG
Ga0182033_105657942	3300016319	Soil	GFTPQGVLHGANEAFRAEFQARRTPGMRRTRTGIGVDTYRPLNVSPEFARMTG
Ga0182033_108889721	3300016319	Soil	AFTPQGVLHGVNEAFRAEFQAQRKPGTRRTRTGIGVDTYRPLNVSPEFARMTG
Ga0182033_115754961	3300016319	Soil	RPGSFRHTPQGILHGANEAYRAEFQARRKPGMRRTSTMVGVDTYRPLRPTPEFVRITA
Ga0182035_102277441	3300016341	Soil	FQARRITGTRRTRAGIGVDSYRPLNVSPEFARMTE
Ga0182032_111709441	3300016357	Soil	GGFAFTPQGVLHGADEAFRAEFQARRTSGTRRTRTGIGVDTYRPLNVSPEFARMTG
Ga0182034_106249542	3300016371	Soil	EAFRAEFQARRTTGMRRTRTGIGVDTYRPLSVSPEFARMTR
Ga0182037_100686481	3300016404	Soil	LHGADEAYRAEFQTRRTPGMRRTRTGIGVDTYRPLN
Ga0182037_102739863	3300016404	Soil	FAFTPQGILHGATEAFRTEFQARRTPGMRRTRTGTGVDTYRPLNVSPEFARITG
Ga0182038_114957192	3300016445	Soil	RAGGFAFTPQGVLHGANEAFRAEFQARRSPGMRRTRTGIGVDTYRPLNVSPEFARMTG
Ga0182038_116439751	3300016445	Soil	QGVLHGADEAFRAEFQARRTTGMRRTRTGIGVDTYRPLSVSPEFARMTR
Ga0187803_100506513	3300017934	Freshwater Sediment	AGRRPGMFRHTPQGILHGADEATRAEFQKKRRPGTRRTATMVGVDTYRPLNPSPEFARMA
Ga0187808_102405913	3300017942	Freshwater Sediment	PQGVLHGANEAFRAEFQARRRPGMRRTRTGIGVDTYRPLNVSVEFARMTG
Ga0210407_105577361	3300020579	Soil	AEFQARRTPGMRRTRTGIGVDTYRPLNVSPEFARMTR
Ga0213881_103100291	3300021374	Exposed Rock	RTEFQAARKPGMRRTRTGIGVDTYRPLNVSAEFARMTG
Ga0210387_100824804	3300021405	Soil	ADEAFRAEFQTRRTPGTRRTRTGIGVDTYRPLNVTPEFARMTE
Ga0210394_109461092	3300021420	Soil	QGILHGADEATRAEFQKKRKPGSHRTATMVGVDTYRPLVPTAEFVRMGR
Ga0213879_100236874	3300021439	Bulk Soil	FTPQGVLHGANEAFRAEFQAARKPGMRRTRTGIGIDTYQPLNVSPEFARMSG
Ga0213871_101042981	3300021441	Rhizosphere	MPMTTRAEFQAARKPGMRRTRTGIGIDTYQPLNVSPEFARMSG
Ga0210390_109478151	3300021474	Soil	GILHGANEAYRAEFQARRKPGMRRTSTMVGVDTYRPLRPASEFLRIAG
Ga0210398_106323912	3300021477	Soil	MGILHGADEQTRAAFQEKRQPGQHRTGTAVGVDTYRPLTPTAAFTKLAG
Ga0242670_10254082	3300022708	Soil	GNFRHTPQGILHGANEAYRAEFQVRRKPGMRRTSTMVGVDTYRLLRPAPEFLRIAR
Ga0242653_10932292	3300022712	Soil	GNFRHTPQGILHGANEAYRAEFQARRKPAMRRTSTMVGVDTYRPLRPAAEFLRIAG
Ga0242661_11453001	3300022717	Soil	DRRPGNFRHTPQGIPHGANEAYRAEFQARRKPGMRRTSTLVGVDTYRPLRPAPEFLRTAG
Ga0242654_102505182	3300022726	Soil	FRAEFQAQRRPGMRRTRTGIGIDTYRPLNVSPEFARMTR
Ga0208220_11695041	3300025627	Arctic Peat Soil	FSFTPQGILHGATEDARAAFNARRQPGDMRKWTGIGVDTYRPLKVSEAFARMTK
Ga0207646_102929963	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	RHTPQGILHGANEAYRAEFQARRKPGMRRTSTSVGVDTYRPLRASPEFARMSG
Ga0209059_12338662	3300026527	Soil	ILHGADEAYRAEFQARRKPGMRRTSTMVGIDSYRPLRPAPEFVRIAG
Ga0209056_107232521	3300026538	Soil	FSFTPQGILHGANEAFRAEFQARRKPGDRRTRTGIGVDTYRPLRVAPEFARMTG
Ga0209577_106682102	3300026552	Soil	PQGILHGADEATRAEFQKHRKPGSHRTATMVGVDTYRPLTPAPEFVRMAG
Ga0209076_11678672	3300027643	Vadose Zone Soil	NEAFRAEFQAQRTPGMRCTRTGIGIDTYRPLNVSPEFARMTG
Ga0209180_104439461	3300027846	Vadose Zone Soil	LHGATEAYRAEFQKKRKPGMHRTSTNVGVDTYRPLNPTPEFARMAG
Ga0209465_104333402	3300027874	Tropical Forest Soil	HTPQGILHGASDAYRAEFQARRKPGMRRTSTSVGVDTYRPLIPSAEFARMSA
Ga0209590_107079131	3300027882	Vadose Zone Soil	MPQGILHGADEATRAEFQARRQPGTRRTATNVGVDTYRPLTPTAEFVRIAG
Ga0209168_106538901	3300027986	Surface Soil	SHTPQGVLHGATEAYRAAFQARRRPGDMRTRTGIGVDTFRPLKVSPEFARLAG
Ga0308309_116886291	3300028906	Soil	GSFRHTPQGILHGANEAYRAEFQARRKPGMRRTSTLVGVDTYRPLRPTPEFVRITG
Ga0222749_106282751	3300029636	Soil	PQGILHGANEAYRAEFQARRKPGMRRTSTMVGVDTYRPLRPASEFLRIAG
Ga0170834_1007922822	3300031057	Forest Soil	EEFRAEFQARRTPGMRRTRTGIGVDTYRPLNASPEFARMTR
Ga0170824_1043646091	3300031231	Forest Soil	GVLHGANEAYRTEFQARRTPGARRTRTGIGVDTYRPLDVSPEFARMTR
Ga0170819_130252741	3300031469	Forest Soil	GVLHGADEVFRAEFQARRTPGARRTRTGIGVDTYRPLDVSPEFARMTR
Ga0170818_1134105993	3300031474	Forest Soil	FTPQGVLHGADEVFRAEFQARRTPGARRTRTGIGVDTYRPLDVSPEFARMTR
Ga0318516_102911351	3300031543	Soil	LHGADEAYRAEFQTRRTPGMRRTRTGIGVDTYRPLNVSPEFARMTG
Ga0318516_103620162	3300031543	Soil	VLQGANEATRAEFQAARTPGMRRTQTRIRVDTYRPLDVSPEFARMTQNWQ
Ga0318541_101416822	3300031545	Soil	VLQGANEATRAEFQAARTPGMRRTRTGIGVDTYRPLNVSPE
Ga0318571_103579972	3300031549	Soil	LAFTPQGILHGATEAFRTEFQARRTPGMRRTRTGIGIDTYRPLNVSPEFARMTD
Ga0318528_102650473	3300031561	Soil	QGVLHGANEAFRAEFQARRSPGTRRTRTGIGIDTYRPLNVSPEFARMTG
Ga0310915_110384211	3300031573	Soil	TPQGVLHGADEAFRAEFQARRTTGMRRTRTGIGVDTYRPLSVSPEFARMTR
Ga0318555_102068411	3300031640	Soil	PKGRRSGGFSFTPQGVLHGADEAFRAEFQTRRTPGMRRTRTGIGVDTYRPLNVTPEFARMTG
Ga0318561_102465452	3300031679	Soil	LHGANEAARAEFQAARTPGMRRTQTRIRVDTYRPLDVSPEFARMTQNWQK
Ga0318561_103618041	3300031679	Soil	HTPQGILHGANEAYRAEFQARRKPGMRRTSTSVGVDTYRPLKPSPVFAQMSS
Ga0318574_105769922	3300031680	Soil	RPGGFSFTPQGVLHGASEAFRAEFQATRTPGMRRTRTGIGVDTYRPLNIAPEFARMTE
Ga0318574_109125152	3300031680	Soil	TLPRRMAPQGILHGATEAFRTEFQARRTPGMRRTRTGIGIDTYRPLNVSPEFARMTD
Ga0318560_103823311	3300031682	Soil	FSFTPQGVLHGADEAFRAEFQTRRTPGMRRTRTGIGVDTYRPLNVSPEFARMTG
Ga0306917_100962041	3300031719	Soil	FGFTPQGVLHGADEAFRAEFQARRTTGMRRTRTGIGVDTYRPLSVSPEFARMTR
Ga0306917_106135031	3300031719	Soil	GGFGFTPQGVLHGANEAFRAEFQARRTPGMRRTRTGIGVDTYRPLNVSPEFARMTG
Ga0306917_115222002	3300031719	Soil	PRGHRAGGFAFTPQGVLHGANEAFRAEFQARRSPGMRRTRTGIGVDTYRPLNVSPEFARMTG
Ga0318492_103316891	3300031748	Soil	FSFTPQGVLHGADEAFRAEFQTRRTPGMRRTRTGIGVDTYRPLNVTPEFARMTG
Ga0318494_104689631	3300031751	Soil	PQGVLHGANEAFRAEFQARRTPGMRRTRTGIGVDTYRPLNVSPEFARMTG
Ga0307475_112273702	3300031754	Hardwood Forest Soil	RPGGFAFTPQGVLHGATEAFRAEFQSRRTPGMWRTRTGIGVDTYRPLNVSPEFARMTG
Ga0318537_102668053	3300031763	Soil	EFQARRTPGMRRTRTGTGVDTYRPLNVSPEFARITG
Ga0318546_103184332	3300031771	Soil	VLQGANEATRAEFQAARTPGMRRTRTGIGVDTYRPLNVSPELERMIR
Ga0318546_106136302	3300031771	Soil	DEAFRAEFQARRTSGTRRTRTGIGVDTYRPLNVSPEFACMTE
Ga0318546_106772622	3300031771	Soil	GGFAFTPQGVLHGANEAFRAEFQARRTPGMRRTRTGIGVDTYRPLNVSPEFARMTG
Ga0318547_106909142	3300031781	Soil	PQGILHGANEAYRAEFQARRKPGMRRTSTSVGVDTYRPLKPSPVFAQMSS
Ga0318547_108631962	3300031781	Soil	LHGVNEAFRAEFQARRITGTRRTRTGIGVDSYRPLNVSPEFARMTE
Ga0318552_106323442	3300031782	Soil	GILHGATEAFRTEFQARRTPGMRRTRTGIGVDTYRPLNVSPEFARMTD
Ga0318529_102723041	3300031792	Soil	PRGRRPGGFAFTPQGILHGATEAFRTEFQARRTPGMRRTRTGIGIDTYRPLNVSPEFARMTD
Ga0318503_101650973	3300031794	Soil	VRCSGGFSFTPQGVLHGADEAYRAEFQTRRTPGMRRTRTGIGVDTYRPLNVTPEFARMTG
Ga0318576_103750062	3300031796	Soil	TQRVRCSGGFSFTPQGVLHGADEAYRAEFQTRRTPGMRRTRTGIGVDTYRPLNVSPEFARMTG
Ga0318523_104497781	3300031798	Soil	GFGFTPQGVLHGANEAFRTEFQAQRTPGTRRTRTGIGVDTYRPLTVSPEFARMTG
Ga0318511_103022581	3300031845	Soil	AFRAEFQTRRTPGMRRTRTGIGVDTYRPLNVTPEFARMTG
Ga0318495_102912012	3300031860	Soil	PQGVLHGAGEAYRAEFQARRKPGMRRTSTSIGVDTYRPLIPSVEFARMTA
Ga0318522_101878971	3300031894	Soil	DPQGRRPGGFAFTPQGVLHGANEAFRTEFQAQRAPGTRRTRTGIGVDTYRPLTVSPEFARMTG
Ga0318520_108688421	3300031897	Soil	QGVLHGANEAFRAEFQARRSPGMRRTRTGIGVDTYRPLNVSPEFARMTG
Ga0306923_122740872	3300031910	Soil	VLHGANEAFRAEFQAQRKPGTRRTRTGIGVDTYRPLNVSPEFARMTG
Ga0310913_104691193	3300031945	Soil	AEFQARRSPGMRRTRTGIGVDTYRPLNVSPEFARMTG
Ga0310910_110569551	3300031946	Soil	LHGANEAFRTEFQAQRAPGTRRTRTGIGVDTYRPLTVSPEFARMTG
Ga0310909_100562714	3300031947	Soil	FGFTPQGVLHGANEAFRAEFQARRTPGMRRTRTGIGVDTYRPLNVSPEFARMTG
Ga0310909_106718581	3300031947	Soil	GADEAYRAEFQTRRTPGMRRTRTGIGVDTYRPLNVSPEFARMTG
Ga0306926_121824231	3300031954	Soil	GFGFTPQGVLHGADEAFGAEFQARRTTGMRRTRTGIGVDTYRPLSVSPEFARMTR
Ga0326597_100297793	3300031965	Soil	VRPRGSRHTPQGILHGATEAYRAEFQKKRKPGTRRTATMVGVDTYRPLNVAPEFARMAG
Ga0306922_101828065	3300032001	Soil	LHGADEAYRAEFQTRRTPGMRRTRTGIGVDTYRLLN
Ga0318569_104113991	3300032010	Soil	FAFTPQGVLHGANEAFRAEFQARRTPGMRRTRTGIGVDTYRPLNVSPEFARMTG
Ga0310911_102910242	3300032035	Soil	VHGADEAFRAEFQTRRTPGMRRTRTGIGVDTYRPLNVTPEFARMTG
Ga0310911_102988022	3300032035	Soil	RAEFQAQRKPGTRRTRTGIGVDTYRPLNVSPEFARMTG
Ga0318545_103414641	3300032042	Soil	EAFRTEFQAQRTPGTRRTRTGIGVDTYRPLTVSPEFARMTG
Ga0318570_102409443	3300032054	Soil	PGGFAFTPQGVLHGADEAFRIEFQARRTPGMRRTRTGTGVDTYRPLNVSPEFARITG
Ga0318533_104340852	3300032059	Soil	FAFTPQGILHGATEAFRTEFQARRTPGMRRTRTGIGIDTYRPLNVSPEFARMTD
Ga0318533_108762481	3300032059	Soil	LHGADEAYRAEFQTRRTPGMRRTRTGIGVDTYRPLNVSPEFALMTG
Ga0318513_104289482	3300032065	Soil	ADEAFRAEFQARRTSGTRRTRTGIGVDTYRPLNVSPEFACMTE
Ga0318577_102277163	3300032091	Soil	SFRHTPQGILHGANEAYRAEFQASRQPGMRRTSTSVGIDTYRPLRPSPEFAQMSS
Ga0318540_101761482	3300032094	Soil	DEAFRAEFQTRRTPGMRRTRTGIGVDTYRPLNVTPEFARMTG
Ga0307470_105789541	3300032174	Hardwood Forest Soil	RADIQAQRRPGMRRTRTAIGVDTYRPLNVSPEFSRMTA
Ga0307472_1023546842	3300032205	Hardwood Forest Soil	QGILHGANEAYRAEFQARRKPGMRRTSTMVGVDTYRPLRPASEFLRIAR
Ga0306920_1008107863	3300032261	Soil	LHGADEAYRAEFQTRRTPGMRRTRTGIGVDTYRPLNVSPEFA
Ga0306920_1016367811	3300032261	Soil	GGFAFTPQGVLHGVNEAFRAEFQARRITGTRRTRTGIGVDSYRPLNVSPEFARMTE
Ga0318519_103511701	3300033290	Soil	LHGADEAFRIEFQARRTPGMRRTRTGTGVDTYRPLNVSPEFARITG
Ga0316628_1032340772	3300033513	Soil	MFRHTPQGILHGADEATRAQFQKNRKLGTHRTGWSVGVDTYRPLTPTAEFAKMAG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F057976

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences