NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F057948

Metagenome / Metatranscriptome Family F057948

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F057948
Family Type Metagenome / Metatranscriptome
Number of Sequences 135
Average Sequence Length 82 residues
Representative Sequence MKLVLAISLVLAACGGPKPKPESPIVDEGSDNPETCCCKSNPLTSEDGKPVYEMSNRMECSAKQGECVPDVQCQKIQPPQ
Number of Associated Samples 106
Number of Associated Scaffolds 135

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 7.41 %
% of genes near scaffold ends (potentially truncated) 19.26 %
% of genes from short scaffolds (< 2000 bps) 79.26 %
Associated GOLD sequencing projects 97
AlphaFold2 3D model prediction Yes
3D model pTM-score0.18

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (100.000 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Host-Associated → Plants → Roots → Unclassified → Unclassified → Ectomycorrhiza
(8.889 % of family members)
Environment Ontology (ENVO) Unclassified
(32.593 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(43.704 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Fibrous Signal Peptide: Yes Secondary Structure distribution: α-helix: 10.19%    β-sheet: 7.41%    Coil/Unstructured: 82.41%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.18
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 135 Family Scaffolds
PF00593TonB_dep_Rec 16.30
PF08501Shikimate_dh_N 3.70
PF12327FtsZ_C 2.96
PF13620CarboxypepD_reg 2.22
PF02601Exonuc_VII_L 1.48
PF05995CDO_I 0.74
PF08281Sigma70_r4_2 0.74
PF13646HEAT_2 0.74
PF07715Plug 0.74
PF02954HTH_8 0.74
PF02743dCache_1 0.74
PF14681UPRTase 0.74
PF12706Lactamase_B_2 0.74
PF13742tRNA_anti_2 0.74
PF00158Sigma54_activat 0.74
PF00990GGDEF 0.74
PF12840HTH_20 0.74
PF12704MacB_PCD 0.74
PF00069Pkinase 0.74
PF01488Shikimate_DH 0.74
PF03313SDH_alpha 0.74
PF07669Eco57I 0.74

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 135 Family Scaffolds
COG0169Shikimate 5-dehydrogenaseAmino acid transport and metabolism [E] 3.70
COG0515Serine/threonine protein kinaseSignal transduction mechanisms [T] 2.96
COG1570Exonuclease VII, large subunitReplication, recombination and repair [L] 1.48
COG1760L-serine deaminaseAmino acid transport and metabolism [E] 0.74
COG2972Sensor histidine kinase YesMSignal transduction mechanisms [T] 0.74
COG5553Predicted metal-dependent enzyme of the double-stranded beta helix superfamilyGeneral function prediction only [R] 0.74

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms100.00 %
UnclassifiedrootN/A0.00 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300003323|rootH1_10070198All Organisms → cellular organisms → Bacteria → Proteobacteria1684Open in IMG/M
3300004799|Ga0058863_11898235All Organisms → cellular organisms → Bacteria892Open in IMG/M
3300005330|Ga0070690_100012766All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → Haliangium → Haliangium ochraceum4947Open in IMG/M
3300005332|Ga0066388_104303509All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria726Open in IMG/M
3300005332|Ga0066388_104374739All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium720Open in IMG/M
3300005332|Ga0066388_107717005All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium539Open in IMG/M
3300005332|Ga0066388_107832550All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium535Open in IMG/M
3300005334|Ga0068869_101328343All Organisms → cellular organisms → Bacteria635Open in IMG/M
3300005338|Ga0068868_102152143All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium531Open in IMG/M
3300005340|Ga0070689_100025103All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → Haliangium → Haliangium ochraceum4476Open in IMG/M
3300005340|Ga0070689_100027983All Organisms → cellular organisms → Bacteria4256Open in IMG/M
3300005340|Ga0070689_101358858All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria641Open in IMG/M
3300005354|Ga0070675_100415427All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1202Open in IMG/M
3300005355|Ga0070671_100828308All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria806Open in IMG/M
3300005365|Ga0070688_100052352All Organisms → cellular organisms → Bacteria2549Open in IMG/M
3300005367|Ga0070667_102102341All Organisms → cellular organisms → Bacteria532Open in IMG/M
3300005440|Ga0070705_100442038All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → unclassified Kofleriaceae → Kofleriaceae bacterium973Open in IMG/M
3300005440|Ga0070705_101079405All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria656Open in IMG/M
3300005458|Ga0070681_10461652All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1182Open in IMG/M
3300005466|Ga0070685_11166967All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria584Open in IMG/M
3300005540|Ga0066697_10470725All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria719Open in IMG/M
3300005577|Ga0068857_100908012All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria845Open in IMG/M
3300005617|Ga0068859_101410825All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria768Open in IMG/M
3300005618|Ga0068864_101487012All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria680Open in IMG/M
3300005618|Ga0068864_102468779All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria526Open in IMG/M
3300005764|Ga0066903_100032816All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales5924Open in IMG/M
3300005764|Ga0066903_106926148All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium588Open in IMG/M
3300005764|Ga0066903_108063851All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria540Open in IMG/M
3300005844|Ga0068862_101083299All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → Haliangium → Haliangium ochraceum796Open in IMG/M
3300006028|Ga0070717_10015848All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → Haliangium → Haliangium ochraceum5829Open in IMG/M
3300006028|Ga0070717_10032781All Organisms → cellular organisms → Bacteria4188Open in IMG/M
3300006046|Ga0066652_100242224All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1574Open in IMG/M
3300006854|Ga0075425_100881217All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1024Open in IMG/M
3300006854|Ga0075425_103140073All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria503Open in IMG/M
3300006904|Ga0075424_101354635All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria756Open in IMG/M
3300006904|Ga0075424_101594721All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria692Open in IMG/M
3300009094|Ga0111539_13153933All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium532Open in IMG/M
3300009101|Ga0105247_10900394All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium683Open in IMG/M
3300009174|Ga0105241_10926750All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium811Open in IMG/M
3300009177|Ga0105248_11707922All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria714Open in IMG/M
3300009553|Ga0105249_11727359All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria698Open in IMG/M
3300009792|Ga0126374_10924464All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria678Open in IMG/M
3300010043|Ga0126380_12274109All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium503Open in IMG/M
3300010046|Ga0126384_10318846All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1284Open in IMG/M
3300010047|Ga0126382_10102191All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1855Open in IMG/M
3300010047|Ga0126382_10628827All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria888Open in IMG/M
3300010326|Ga0134065_10240695All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria671Open in IMG/M
3300010337|Ga0134062_10053522All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1649Open in IMG/M
3300010358|Ga0126370_10832249All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria826Open in IMG/M
3300010362|Ga0126377_10982161All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium910Open in IMG/M
3300010362|Ga0126377_11250854All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria813Open in IMG/M
3300010364|Ga0134066_10317422All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium566Open in IMG/M
3300010398|Ga0126383_11702798All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria719Open in IMG/M
3300010399|Ga0134127_10115663All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria2378Open in IMG/M
3300010399|Ga0134127_11876879All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium676Open in IMG/M
3300010400|Ga0134122_12417614All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium573Open in IMG/M
3300010401|Ga0134121_10028748All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → Haliangium → Haliangium ochraceum4492Open in IMG/M
3300010403|Ga0134123_10898870All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria891Open in IMG/M
3300011414|Ga0137442_1022204All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1119Open in IMG/M
3300011442|Ga0137437_1013136All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria2848Open in IMG/M
3300011442|Ga0137437_1068122All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1214Open in IMG/M
3300012179|Ga0137334_1124011All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium584Open in IMG/M
3300012212|Ga0150985_115749302All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria915Open in IMG/M
3300012212|Ga0150985_120419788All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria536Open in IMG/M
3300012944|Ga0137410_10120713All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1967Open in IMG/M
3300012948|Ga0126375_10914932All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium706Open in IMG/M
3300012960|Ga0164301_10729131All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium749Open in IMG/M
3300012971|Ga0126369_12293835All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria626Open in IMG/M
(restricted) 3300013132|Ga0172372_10180400All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1625Open in IMG/M
3300013297|Ga0157378_11286419All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium772Open in IMG/M
3300013297|Ga0157378_13115283All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium515Open in IMG/M
3300014969|Ga0157376_11730682All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium661Open in IMG/M
3300017966|Ga0187776_10390116All Organisms → cellular organisms → Bacteria → Proteobacteria929Open in IMG/M
3300018083|Ga0184628_10057254All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1972Open in IMG/M
3300018466|Ga0190268_11233237All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria623Open in IMG/M
3300019880|Ga0193712_1036199All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1068Open in IMG/M
3300020005|Ga0193697_1108655All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria656Open in IMG/M
3300020010|Ga0193749_1018348All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1369Open in IMG/M
3300023270|Ga0247784_1040097All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1129Open in IMG/M
3300024224|Ga0247673_1018641All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium920Open in IMG/M
3300024323|Ga0247666_1043570All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium917Open in IMG/M
3300025908|Ga0207643_10115609All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1584Open in IMG/M
3300025911|Ga0207654_10307979All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1079Open in IMG/M
3300025912|Ga0207707_10388051All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1200Open in IMG/M
3300025918|Ga0207662_10148275All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1490Open in IMG/M
3300025926|Ga0207659_10630871All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria915Open in IMG/M
3300025931|Ga0207644_10837447All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria770Open in IMG/M
3300025934|Ga0207686_10842742All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria737Open in IMG/M
3300025936|Ga0207670_10058847All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria2611Open in IMG/M
3300025936|Ga0207670_11088118All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria674Open in IMG/M
3300025938|Ga0207704_11126623All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria667Open in IMG/M
3300025942|Ga0207689_10413589All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1125Open in IMG/M
3300025961|Ga0207712_10250539All Organisms → cellular organisms → Bacteria1431Open in IMG/M
3300025961|Ga0207712_11388475All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium628Open in IMG/M
3300025986|Ga0207658_11124195All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria718Open in IMG/M
3300025986|Ga0207658_11424173All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium634Open in IMG/M
3300026035|Ga0207703_10875770All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria859Open in IMG/M
3300027903|Ga0209488_10793738All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium672Open in IMG/M
3300028380|Ga0268265_10655008All Organisms → cellular organisms → Bacteria → Proteobacteria1010Open in IMG/M
3300028381|Ga0268264_10043293All Organisms → cellular organisms → Bacteria3730Open in IMG/M
3300028786|Ga0307517_10027416All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → Haliangium → Haliangium ochraceum6843Open in IMG/M
3300028794|Ga0307515_10042077All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → Haliangium → Haliangium ochraceum7161Open in IMG/M
3300028868|Ga0302163_10131486All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria658Open in IMG/M
3300028869|Ga0302263_10117103All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1060Open in IMG/M
3300028870|Ga0302254_10321905All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria571Open in IMG/M
3300029984|Ga0311332_10808921All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria747Open in IMG/M
3300030010|Ga0302299_10502762All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria610Open in IMG/M
3300030114|Ga0311333_10000072All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales72392Open in IMG/M
3300030521|Ga0307511_10408862All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria554Open in IMG/M
3300031170|Ga0307498_10423178All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium529Open in IMG/M
3300031200|Ga0307496_10009813All Organisms → cellular organisms → Bacteria1213Open in IMG/M
3300031232|Ga0302323_100130229All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria2471Open in IMG/M
3300031232|Ga0302323_100536606All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1260Open in IMG/M
3300031238|Ga0265332_10039139All Organisms → cellular organisms → Bacteria2053Open in IMG/M
3300031507|Ga0307509_10000060All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales154618Open in IMG/M
3300031507|Ga0307509_10018615All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → Haliangium → Haliangium ochraceum7958Open in IMG/M
3300031507|Ga0307509_10020395All Organisms → cellular organisms → Bacteria → Proteobacteria7519Open in IMG/M
3300031507|Ga0307509_10034563All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → Haliangium → Haliangium ochraceum5553Open in IMG/M
3300031616|Ga0307508_10615033All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria689Open in IMG/M
3300031616|Ga0307508_10750732All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria589Open in IMG/M
3300031715|Ga0307476_10020903All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales4249Open in IMG/M
3300031720|Ga0307469_10696261All Organisms → cellular organisms → Bacteria921Open in IMG/M
3300031720|Ga0307469_11255502All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria702Open in IMG/M
3300031730|Ga0307516_10034054All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → Haliangium → Haliangium ochraceum5122Open in IMG/M
3300031730|Ga0307516_10118920All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria2435Open in IMG/M
3300031740|Ga0307468_101129465All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria701Open in IMG/M
3300031918|Ga0311367_10675359All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1051Open in IMG/M
3300031938|Ga0308175_100000276All Organisms → cellular organisms → Bacteria → Proteobacteria38345Open in IMG/M
3300031938|Ga0308175_101194224All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria846Open in IMG/M
3300031996|Ga0308176_10620473All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1113Open in IMG/M
3300032074|Ga0308173_11220875All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria703Open in IMG/M
3300032205|Ga0307472_101092468All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium754Open in IMG/M
3300033179|Ga0307507_10122194All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria2078Open in IMG/M
3300033408|Ga0316605_10029600All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria3639Open in IMG/M
3300034268|Ga0372943_0008646All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales5264Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
EctomycorrhizaHost-Associated → Plants → Roots → Unclassified → Unclassified → Ectomycorrhiza8.89%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil8.15%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere6.67%
FenEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Fen6.67%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil5.19%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil5.19%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere5.19%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil3.70%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil3.70%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere3.70%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere3.70%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere3.70%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere3.70%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil2.22%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil2.22%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere2.22%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil2.96%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil2.96%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere2.96%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil1.48%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil1.48%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere1.48%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere1.48%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere1.48%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere1.48%
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater0.74%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment0.74%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil0.74%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland0.74%
Plant LitterEnvironmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter0.74%
Host-AssociatedHost-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated0.74%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere0.74%
Sugarcane Root And Bulk SoilHost-Associated → Plants → Rhizome → Unclassified → Unclassified → Sugarcane Root And Bulk Soil0.74%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.74%
RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere0.74%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300003323Sugarcane root Sample H1Host-AssociatedOpen in IMG/M
3300004799Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-3 (Metagenome Metatranscriptome)Host-AssociatedOpen in IMG/M
3300005330Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaGEnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005334Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2Host-AssociatedOpen in IMG/M
3300005338Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2Host-AssociatedOpen in IMG/M
3300005340Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaGEnvironmentalOpen in IMG/M
3300005354Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaGHost-AssociatedOpen in IMG/M
3300005355Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaGHost-AssociatedOpen in IMG/M
3300005365Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaGEnvironmentalOpen in IMG/M
3300005367Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaGHost-AssociatedOpen in IMG/M
3300005440Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaGEnvironmentalOpen in IMG/M
3300005458Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaGEnvironmentalOpen in IMG/M
3300005466Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaGEnvironmentalOpen in IMG/M
3300005540Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146EnvironmentalOpen in IMG/M
3300005577Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2Host-AssociatedOpen in IMG/M
3300005617Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2Host-AssociatedOpen in IMG/M
3300005618Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2Host-AssociatedOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300005844Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2Host-AssociatedOpen in IMG/M
3300006028Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaGEnvironmentalOpen in IMG/M
3300006046Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101EnvironmentalOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300006904Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3Host-AssociatedOpen in IMG/M
3300009094Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009101Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaGHost-AssociatedOpen in IMG/M
3300009174Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaGHost-AssociatedOpen in IMG/M
3300009177Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaGHost-AssociatedOpen in IMG/M
3300009553Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaGHost-AssociatedOpen in IMG/M
3300009792Tropical forest soil microbial communities from Panama - MetaG Plot_12EnvironmentalOpen in IMG/M
3300010043Tropical forest soil microbial communities from Panama - MetaG Plot_26EnvironmentalOpen in IMG/M
3300010046Tropical forest soil microbial communities from Panama - MetaG Plot_36EnvironmentalOpen in IMG/M
3300010047Tropical forest soil microbial communities from Panama - MetaG Plot_30EnvironmentalOpen in IMG/M
3300010326Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300010337Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015EnvironmentalOpen in IMG/M
3300010358Tropical forest soil microbial communities from Panama - MetaG Plot_3EnvironmentalOpen in IMG/M
3300010362Tropical forest soil microbial communities from Panama - MetaG Plot_22EnvironmentalOpen in IMG/M
3300010364Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09212015EnvironmentalOpen in IMG/M
3300010398Tropical forest soil microbial communities from Panama - MetaG Plot_35EnvironmentalOpen in IMG/M
3300010399Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3EnvironmentalOpen in IMG/M
3300010400Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2EnvironmentalOpen in IMG/M
3300010401Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1EnvironmentalOpen in IMG/M
3300010403Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3EnvironmentalOpen in IMG/M
3300011414Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT266_2EnvironmentalOpen in IMG/M
3300011442Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT138_2EnvironmentalOpen in IMG/M
3300012179Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT262_2EnvironmentalOpen in IMG/M
3300012212Combined assembly of Hopland grassland soilHost-AssociatedOpen in IMG/M
3300012944Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012948Tropical forest soil microbial communities from Panama - MetaG Plot_14EnvironmentalOpen in IMG/M
3300012960Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MGEnvironmentalOpen in IMG/M
3300012971Tropical forest soil microbial communities from Panama - MetaG Plot_1EnvironmentalOpen in IMG/M
3300013132 (restricted)Freshwater microbial communities from Kabuno Bay, South-Kivu, Congo ? kab_092012_9.5mEnvironmentalOpen in IMG/M
3300013297Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaGHost-AssociatedOpen in IMG/M
3300014969Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaGHost-AssociatedOpen in IMG/M
3300017966Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MGEnvironmentalOpen in IMG/M
3300018083Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_b1EnvironmentalOpen in IMG/M
3300018466Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 TEnvironmentalOpen in IMG/M
3300019880Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3a1EnvironmentalOpen in IMG/M
3300020005Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3m2EnvironmentalOpen in IMG/M
3300020010Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1s2EnvironmentalOpen in IMG/M
3300023270Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L169-409R-5EnvironmentalOpen in IMG/M
3300024224Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK14EnvironmentalOpen in IMG/M
3300024323Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK07EnvironmentalOpen in IMG/M
3300025908Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025911Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025912Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025918Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025926Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025931Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025934Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025936Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025938Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025942Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025961Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025986Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026035Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300027903Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)EnvironmentalOpen in IMG/M
3300028380Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300028381Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300028786Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EMHost-AssociatedOpen in IMG/M
3300028794Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EMHost-AssociatedOpen in IMG/M
3300028868Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_E2_3EnvironmentalOpen in IMG/M
3300028869Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Fen_N1_4EnvironmentalOpen in IMG/M
3300028870Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_E1_4EnvironmentalOpen in IMG/M
3300029984I_Fen_E1 coassemblyEnvironmentalOpen in IMG/M
3300030010Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_N3_4EnvironmentalOpen in IMG/M
3300030114I_Fen_E2 coassemblyEnvironmentalOpen in IMG/M
3300030521Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EMHost-AssociatedOpen in IMG/M
3300031170Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_SEnvironmentalOpen in IMG/M
3300031200Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 9_SEnvironmentalOpen in IMG/M
3300031232Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_3EnvironmentalOpen in IMG/M
3300031238Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaGHost-AssociatedOpen in IMG/M
3300031507Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EMHost-AssociatedOpen in IMG/M
3300031616Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EMHost-AssociatedOpen in IMG/M
3300031715Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05EnvironmentalOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M
3300031730Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EMHost-AssociatedOpen in IMG/M
3300031740Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05EnvironmentalOpen in IMG/M
3300031918III_Fen_N3 coassemblyEnvironmentalOpen in IMG/M
3300031938Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1EnvironmentalOpen in IMG/M
3300031996Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2EnvironmentalOpen in IMG/M
3300032074Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R1EnvironmentalOpen in IMG/M
3300032205Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05EnvironmentalOpen in IMG/M
3300033179Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EMHost-AssociatedOpen in IMG/M
3300033408Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day20_noCTEnvironmentalOpen in IMG/M
3300034268Forest soil microbial communities from Eldorado National Forest, California, USA - SNFC_MG_FRD_1.2EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
rootH1_1007019833300003323Sugarcane Root And Bulk SoilMKLALALLVLAACGGPMAKPESPIVNEGSDTPETCCCKSFPLTSEDGKPVFEMAPRMECSTRQGTCVSDVQCRVESGTGAGSGH*
Ga0058863_1189823523300004799Host-AssociatedALVLAACGGPRPKPESPIVNEGSDTPETCCCKSLPLTSEDGKPLYEMQPRMECSAKQGECVPDVQCRGTRTESPN*
Ga0070690_10001276633300005330Switchgrass RhizosphereMKLVLALALVIAACGGPKPKPESPIVNEGSDTPENCCCKSSPLSSDDGKPLYEMLNRMECSAKQGECVPDVQCKKTGAE*
Ga0066388_10430350923300005332Tropical Forest SoilMKLALGCALALLAACGGVKAKPESAIVNEGSDTPESCCCKSTPLTSEDGKPVWEMAPRMECSTRQGECVPDVQCRKSDDSGPSGSGSGTGN*
Ga0066388_10437473913300005332Tropical Forest SoilMKLPLVATLLLAACGGPQAKPESPIVNEGSDTPETCCCKSFPLTSEDGKPVYEMAPRMECSARQGTCVNDVQCHVENGTGPGSGN*
Ga0066388_10771700513300005332Tropical Forest SoilMKRVLAPGRISRTAGCLMLVLVACGGPKPKPESPIVNEGSDTPETCCCKSFPLTSEDGKPVYAMTPRMECSTKQGECVPDVQCHRTQPEP*
Ga0066388_10783255023300005332Tropical Forest SoilMKRLPAIVAALVALGGLGLVLAGCGGPQPKKESPIVDEGSNVPETCCCKSFPLTSEDGKPAYAMTPRMECSTRQGECVADVQCQKTKPPE*
Ga0068869_10132834323300005334Miscanthus RhizosphereMKLALALVLLSACSGTQPRPESPIVNEGSNTPETCCCKSFPLANEDGKPLYEMSPRMECSVVQGVCVPDVQCRKTAPSE*
Ga0068868_10215214313300005338Miscanthus RhizosphereMKRALALLVMLAACGGPKPKKESPIVNEGSDVSEICCCKSFPLSAEDGKAVYAMAPRMECSTKQGECVSDVQCQKTQPE*
Ga0070689_10002510353300005340Switchgrass RhizosphereVAKSCYDQRMKLVLALALALAACGGPKPKPESPIVNEGSDTPENCCCKSNPLSSDDGKPLYEMLNRMECSSKQGECVPDVQCKKTGPE*
Ga0070689_10002798333300005340Switchgrass RhizosphereMKRALVAMLVIAACGGPRPKKESPIVNEGSATPETCCCKTFPLAAEDAKPAYAMTPRMECSTTQGECVPDVQCRKTPAE*
Ga0070689_10135885813300005340Switchgrass RhizosphereMKLPLVALLLLAACGGPQAKPESPIVNEGSDTPETCCCKSFPLTSEDGKPVYDMAPRMECSARQGTCVNDVQCHVENGTGPGSGN*
Ga0070675_10041542713300005354Miscanthus RhizosphereMKRALALLVMLAACGGPKPKKESPIVNEGSDVPETCCCKSFPLSAEDGKAVYAMAPRMECSTKQGECVSDVQCQKTQPE*
Ga0070671_10082830823300005355Switchgrass RhizosphereMKRALVLLVMLAACGGPKPRKESPIVNEGSDVPETCCCKSFPLSSEDGKAAYAMTPRMECSTKQGECVPDVQCSQKQPE*
Ga0070688_10005235223300005365Switchgrass RhizosphereMKLVLALALVIAACGGPKPKPESPIVNEGSDTPENCCCKSNPLSSDDGKPLYEMLNRMECSSKQGECVPDVQCKKTGPE*
Ga0070667_10210234113300005367Switchgrass RhizosphereMKLALALTLVLAACGSKPKPESPLVPEGADVPETCCCKSHPLSSEDGKPVFAMTNRMECSTQQGDCQPDVQCQRSDKEP*
Ga0070705_10044203833300005440Corn, Switchgrass And Miscanthus RhizosphereMKRALVAMLVIAACGGPRPKKESPIVNEGSATPETCCCKTFPLAAEDAKPAYAMTPRMECSTTQGECVPDVQ
Ga0070705_10107940523300005440Corn, Switchgrass And Miscanthus RhizosphereSTSRSSCYDRVMKLALGCALALLAACGGVKAKPESAIVNEGSDTPESCCCKANPLTSEDGKPVWEMAPRMECSTRQGECVPDVQCRKSDDSGSTPGSGSG*
Ga0070681_1046165233300005458Corn RhizosphereMKLALVTALVLAACGGPRPKPESPIVNEGSDTPETCCCKSLPLTSEDGKPLYEMQPRMECSAKQGECVPDVQCRGTRTESPN*
Ga0070685_1116696713300005466Switchgrass RhizosphereMKLALALVLLSACSGTQPRPESPIVNEGSNTPETCCCKSFPLANEDGKPLYEMSPRMECSVVQGVCVPD
Ga0066697_1047072523300005540SoilMRLVLALTFALAACSGPKKPATKTVDEGSGVPSDCCCKSNPLTSEDGKPLWEMANRMECSTRQGECVPDVQCKKQPE*
Ga0068857_10090801223300005577Corn RhizosphereMKLALVMMLVLSACGGGKPKPESPIVDEGSDNPESCCCKSNPLTSEDGKPVYEMSNRMECSAKQGECVPDVQCQKTQPPP*
Ga0068859_10141082523300005617Switchgrass RhizosphereLVAMLVIAACGGPRPKKESPIVNEGSDTPETCCCKTFPLAAEDAKPAYAMTPRMECSTTQGECVPDVQCRKTPAE*
Ga0068864_10148701223300005618Switchgrass RhizosphereMKRALVLLVLLAACGGPKPKKESPIVNEGSDVPETCCCKSFPLTAEDGKPAYAMTPRMECSTTQGECVPDVQCRKTPAE*
Ga0068864_10246877913300005618Switchgrass RhizosphereGVKAKPESAIVNEGSDTPESCCCKANPLTSEDGKPVWEMAPRMECSTRQGECVPDVQCRKSDDSGSTPGSGSG*
Ga0066903_10003281633300005764Tropical Forest SoilMKLAVITALVLAACGGPAPKPESPIVNEGSDTPEACCCKWFPLASEDGKPVYEMHPRMECSAKQGECVPDVQCGASQTAPPADRDR*
Ga0066903_10692614823300005764Tropical Forest SoilVCYDHAMKVVLASLLALAACSGIKPKPESPMVNEGSDVPETCCCKSLPLTSEDGRPVFEMAPRMECSGKQGECVPDVQCHLTGSGSDR*
Ga0066903_10806385123300005764Tropical Forest SoilMKLALGCALLLAACGGPKAKPESALVNEGSDTPETCCCKSSPLTSEDGKPVWEMAPRMECSTRQGECV
Ga0068862_10108329923300005844Switchgrass RhizosphereMKLVLALALALAACGGPKPKPESPIVNEGSDTPENCCCKSSPLSSDDSKPLYEMINRMECSAKQGECVPDVQCKKTGPE*
Ga0070717_1001584833300006028Corn, Switchgrass And Miscanthus RhizosphereMKLALALTLVLAACGSKPKPESPIVPEGSDVPETCCCKSHPLTSEDGKPAFAMTNRMECSTQQGDCEPDIQCQKTDKDP*
Ga0070717_1003278123300006028Corn, Switchgrass And Miscanthus RhizosphereMAVTRVTTSAMKLALAMTLVLAACGGGKPKPESPIVNEGSDTSENCCCKSNPLTSDDGKPVYDMANRMECSSRQGECVPDVQCQKQPTP*
Ga0066652_10024222423300006046SoilMKLLAILLALAACSGIQPKRESPLVNEGSDTPETCCCKSFPMTSEDGKPVFEMAPRMECSARQGECVPDVQCPKIGPGSDR*
Ga0075425_10088121723300006854Populus RhizosphereMKLALGCALALLAACGGVKAKPESAIVNEGSDTPESCCCKANPLTSEDGKPVWEMAPRMECSTRQGECVPDVQCRKSDDSGSTPGSGSG*
Ga0075425_10314007313300006854Populus RhizosphereVIAACGGPRPKKESPIVNEGSATPETCCCKTFPLAAEDAKPAYAMTPRMACSTTQGECVPDVQCRKTPAE*
Ga0075424_10135463523300006904Populus RhizosphereMKLVLAISLVLAACGGPKPKPESPIVDEGSDNPETCCCKSNPLTSEDGKPVYEMSNRMECSAKQGECVPDVQCQKIQPPQ*
Ga0075424_10159472123300006904Populus RhizosphereMKLALGCALALLAACGGVKAKPESAIVNEGSDTPESCCCKASPLTSEDGKPVWEMAPRMECSTRQGECVPDVQCRKSDDSGSTPGSGSG*
Ga0111539_1315393313300009094Populus RhizosphereMKLALALVVLLSACSGTQARPESPIVNEGSNTPETCCCKSFPLANEDGKPLYEMSPRMECSVVQGVCVPDVQCRKTAPSE*
Ga0105247_1090039413300009101Switchgrass RhizosphereTVRAADSCYDHRMKLLLAMTLVLAGCGGTTAKRESPLVNEGSDLPADCCCKSNPLSSEDGKPVYEPTNRMECSAKPGECVADIQCKKIPPPP*
Ga0105241_1092675023300009174Corn RhizosphereMKLVVGLVALLCACGPIQSKKDSPIVNEGSDTPADCCCKSAPLTSEDGKPVFAMTPRMECSSQQGECVPDVQCEKQPQPE*
Ga0105248_1170792223300009177Switchgrass RhizosphereMKLALVTALVLAACGGPRPKPESPIVNEGSDTPETCCCKSFPLTSEDGKPVYEMAPRMECSARQGACVSDVQCHVENGPGPGAGSGN*
Ga0105249_1172735923300009553Switchgrass RhizosphereMKLVLAISLVLAACGGPKPKPESPIVDEGSDNPESCCCKSNPLTSDDGKPVYEMSNRMECSAKQGECVPDVQCQKIQPPQ*
Ga0126374_1092446423300009792Tropical Forest SoilMKLALALLLLAACGGSMAKPESPIVNEGSDTPETCCCKSFPLTSEDGKPVYEMAPRMECSARQGTCVNDVQCHVENGTGPGSGN*
Ga0126380_1227410913300010043Tropical Forest SoilMKLPLVATLLLAACGGPQAKPESPIVNEGSDTPETCCCKSFPLTSEDGKPVYDMAPRMECSARQGTCVNDVQCHVENGTGPGSGN*
Ga0126384_1031884623300010046Tropical Forest SoilMKLALALLVLAACGGPMAKPESPIVNEGSDTPETCCCKSFPLTSEDGKPVYDMSPRMECSARQGECVPDVQCRKTDVDTSTGSGSGG*
Ga0126382_1010219123300010047Tropical Forest SoilMKLAVVTALVLAACGGPRPKPESPIVNEGSDTPETCCCKSFPLTSDDGKPVYEMQPRMECSAKQGECVPDVQCRASQASPPGN*
Ga0126382_1062882723300010047Tropical Forest SoilMKLALGCALALLAACGGVKAKPESAIVNEGSDTPESCCCKSNPLTSEDGKPVWEMAPRMECSTRQGECVPDVQCRKSDDSGSGSGSGS*
Ga0134065_1024069513300010326Grasslands SoilMKRALVLLVMLAACGGPKPKKESPIVNEGSDVPETCCCKSFPLSSEDGKPVYAMAPRMECSTKPGECVPDVQCKQTQPE*
Ga0134062_1005352223300010337Grasslands SoilMKLLAILLALAACSGIQPKRESPLVNEGSDTPETCCCKSFPMTSEDGKPVFEMAPRMECSARQGECVPDVQCPKIGPGSGR*
Ga0126370_1083224923300010358Tropical Forest SoilMKLPLVATLLLAACGGPQAKPESPLVNEGSDTPETCCCKSFPLTSEDGKPVYDMAPRMECSARQGTCVNDVQCRVENGAGPGSGN*
Ga0126377_1098216123300010362Tropical Forest SoilMKLALVLTLLAACGGPKPKPESAIVNEGSDTPESCCCKSFPLTSEDGKPVYEMAARMECSARQGECVPDVQCRKSDSDATPGSGSGN*
Ga0126377_1125085423300010362Tropical Forest SoilMKRALVLLVMLAACGGPKPKKESPIVNEGSDVPETCCCKSFPLTAEDGKPAYAMTPRMECSTSQGECVPDVQCRKAAE*
Ga0134066_1031742223300010364Grasslands SoilMKLALAMTLVLAACGSKPKPESPIVPEGSDTPETCCCKSYPLTSENGKPVFAMTNRMECSTQQGDCEADVQRQKTDKEP*
Ga0126383_1170279823300010398Tropical Forest SoilMKLPLVALLLLAACGGPQAKPESPIVNEGSDTPETCCCKSFPLTSEDGKPVFEMAPRMECSAKQGSCVADVQCHVEGGTGSAN*
Ga0134127_1011566333300010399Terrestrial SoilMKRVLAVTLVLAACGGPKPKKESPIVNEGSAVPETCCCKTFPLTAEDGKPAYTMTPRMECSTQQGECVPDVQCQKQPEPN*
Ga0134127_1187687923300010399Terrestrial SoilMKRALVAMLVIAACGGPRPKKESPIVNEGSATPETCCCKTFPLAAEDAKPAYAMTPRMECSTTQGECVPDVQCQKQPEPN*
Ga0134122_1241761423300010400Terrestrial SoilMKLALGCALALLAACGGPKAKPESAIVNEGSDTPETCCCKSFPLTSEDGKAIWEMAPRMECSTRQGECVPDVQCRKSDDSGGGSGSGG*
Ga0134121_1002874823300010401Terrestrial SoilMKLVLAMTLVLAACGGTKPKPESPLVNEGSDTPENCCCKSTPLASDDGKPIYEMANRMECSSKQGECEPDVQCQKVQPSQQ*
Ga0134123_1089887023300010403Terrestrial SoilMKRVLAVTLVLAACGGPKPKKESPIVNEGPAVPETCCCKTFPLTAEDGKPAYTMTPRMECSTQQGECVPDVQCQKQPEPN*
Ga0137442_102220413300011414SoilMKLALLIALVLTACGGPKPKPESPIVNEGSDTPETCCCKSNPLTSEDGKAVYDMANRMECSAKQGECVPDVQCQKAQQPD*
Ga0137437_101313623300011442SoilMKLALAMTLGLAACGAGRAKPESPLVNEGSDTPENCCCKSNPLTSEDGKPVYDMANRMECSSKQGECVPDVQCQKIQPPE*
Ga0137437_106812223300011442SoilMKLALVVLLLAACGGPLAKPESPIVNEGSDTPETCCCKSFPLTSEDGKPVYEMTPRMECSTRQGECVPDVQCGGRTEAGSAR*
Ga0137334_112401113300012179SoilMKLALAMTLVLAACGGGKPKPESPIVNEGSDTPENCCCKSNPLTSDDGKPVYDMANRMECSSRQGECVPDVQCQKTQMPEQDE*
Ga0150985_11574930223300012212Avena Fatua RhizosphereMKLALALLVLAACGGPMAKPESPIVNEGSDTPETCCCKSFPLTSEDGKPVFEMAPRMECSARPGTCVNDVQCHVESGTGSGN*
Ga0150985_12041978823300012212Avena Fatua RhizosphereTLLLAACGSKPKPESPIVEEGSDVPETCCCMTRPLTSSDGHWAYAMTNRIECSTQQGECMPDEQCQSFTPTKRSDHITR*
Ga0137410_1012071323300012944Vadose Zone SoilMKLPLVATLLLAACGGPQAKPESPIVNEGSDTPETCCCKSFPLTSEDGKAVYEMAPRMECSARQGTCVNDVQCHVESGAGAGSGN*
Ga0126375_1091493213300012948Tropical Forest SoilALVLTLLAACGGPKPKPESAIVNEGSDTPESCCCKSFPLTSEDGKPVYEMAARMECSARQGECVPDVQCRKSDSDATPGSGSGN*
Ga0164301_1072913123300012960SoilMKLPLVALLLLAACGGPQAKPESPIVNEGSDTPETCCCKSFPLTSEDGKAVFEMAPRMECSARQGTCVNDVQCHVENGTGPGSGN
Ga0126369_1229383523300012971Tropical Forest SoilMKLPLVATLLLAACGGPQAKPESPIVNEGSDTPETCCCKSSPLTSEDGKPVWDMAPRMECSAKQGECVPDVQCRKTGDTGSGS*
(restricted) Ga0172372_1018040023300013132FreshwaterMNKLISAWAVTMLVVAACGGSKPKPESAIVEEKGSAVPESCCCKSTPLVSEDGKALYEMLGRMECSGKHGECVDDVQCNAKAPTE*
Ga0157378_1128641923300013297Miscanthus RhizosphereMKLLLAMTLVLAGCGGTTAKRESPLVNEGSDLPADCCCKSNPLSSEDGKPVYEPTNRMECSAKPGECVADIQCKKIPPPP*
Ga0157378_1311528313300013297Miscanthus RhizosphereMKILVACMVMAAACGGGQPKVDNSMKNDGSDTGENCCCKSNPLTSDDGKPLYEMSNRMECSTKQGACVPDVQC
Ga0157376_1173068223300014969Miscanthus RhizosphereMKLPLVALLLLAACGGPQAKPESPIVNEGSDTPETCCCKSFPLTSEDGKAVFEMAPRMECSARQDTCVNDVQCHVENGTGPGSGN*
Ga0187776_1039011623300017966Tropical PeatlandMKLVLALTLVAAACGGPKPKPESPLVDEGSDNPESCCCKWTALTSEDGKPTYAMSNRMECSSRQGECVPDVQCNKTQPPPSPD
Ga0184628_1005725433300018083Groundwater SedimentMKLALAMTLALAACGGPKPKHESPIVNEGSDVPESCCCTSHPLTSEDGKPLYEMVNRMECSTKQGECVPDVQCKKAPD
Ga0190268_1123323723300018466SoilRRRVHPLNLCYDHGMKRVLAVMLVLAACGGPKPKKESPIVNEGSDVPETCCCKSLPITAVDGKPVYEMTPRMECSTQHGECVADVQCQKTQPE
Ga0193712_103619923300019880SoilMKRALALLVMLAACGGPKPKKESPIVNEGSDVPETCCCKSFPLSSEEGKAVYAMTPRMECSTRQGECVGDVQCQKTKPD
Ga0193697_110865523300020005SoilMKRAIVLLAMLAACGGPKPKKESPIVNEGSDVPETCCCKSFPLTAEDGKPAYTMTPRMECSTKQGECVADVQCHATPPQ
Ga0193749_101834823300020010SoilMKRVIAMTLVLAACGGPAPRPESPIVNEGSDVPESCCCKSNPLTSEDGKPVYNMANRMECSTQQGECVPDVQCQKTQPPASQ
Ga0247784_104009723300023270Plant LitterVFTATPRESVLRQGMKRAFAMLLLLAACPGPQAKRESPLVNEGSATPETCCCKSRPLTSEDGKPVYRVEPRMECSVQQGECVPDVVCHKEPSE
Ga0247673_101864113300024224SoilMKLVLTLALVLTACGGPKPKPESPIVNEGSDTPENCCCKSSPLTSDDGKPLYEMLNRMECSSKQGECVPDVQCKKTGPE
Ga0247666_104357013300024323SoilMKLAVVTALVLAACGGTQPKPESPIVNEGSDTPETCCCKSFPLTSDDGKPVYEMQPRMECSAKQGECGPDVQCHASQTAPPG
Ga0207643_1011560923300025908Miscanthus RhizosphereMKLALALVLLSACSGTQPRPESPIVNEGSNTPETCCCKSFPLANEDGKPLYEMSPRMECSVVQGVCVPDVQCRKTAPSE
Ga0207654_1030797923300025911Corn RhizosphereMKLVVGLVALLCACGPIQSKKDSPIVNEGSDTPADCCCKSAPLTSEDGKPVFALTPRMECSSQQGECVPDVQCTPTSN
Ga0207707_1038805123300025912Corn RhizosphereMKLALVTALVLAACGGPRPKPESPIVNEGSDTPETCCCKSLPLTSEDGKPLYEMQPRMECSAKQGECVPDVQCRGTRTESPN
Ga0207662_1014827523300025918Switchgrass RhizosphereMKRALVLLVMLAACGGPKPKKESPIVNEGSDVPETCCCKSFPLTAEDGKPAYAMTPRMECSTTQGECVPDVQCRKTPAE
Ga0207659_1063087123300025926Miscanthus RhizosphereMKRALALLVMLAACGGPKPKKESPIVNEGSDVPETCCCKSFPLSAEDGKAVYAMAPRMECSTKQGECVSDVQCQKTQPE
Ga0207644_1083744723300025931Switchgrass RhizosphereMKRALVLLVMLAACGGPKPRKESPIVNEGSDVPETCCCKSFPLSSEDGKAAYAMTPRMECSTKQGECVPDVQCSQKQPE
Ga0207686_1084274223300025934Miscanthus RhizosphereMKLPLVALLLLAACGGPQAKPESPIVNEGSDTPETCCCKSFPLANEDGKPLYEMSPRMECSVVQGVCVPDVQCRKTAPSE
Ga0207670_1005884733300025936Switchgrass RhizosphereVAKSCYDQRMKLVLALALALAACGGPKPKPESPIVNEGSDTPENCCCKSNPLSSDDGKPLYEMLNRMECSSKQGECVPDVQCKKTGPE
Ga0207670_1108811823300025936Switchgrass RhizosphereMKLPLVALLLLAACGGPQAKPESPIVNEGSDTPETCCCKSFPLTSEDGKPVYDMAPRMECSARQGTCVNDVQCHVENGTGPGSGN
Ga0207704_1112662323300025938Miscanthus RhizosphereRAMKLALVATLLLAACGGPKAKPESPIVNEGSDTPETCCCKSFPLTSEDGKAVFEMAPRMECSARQGTCVNDVQCHVENGTGPGSGN
Ga0207689_1041358913300025942Miscanthus RhizosphereMTAAPCYDRRMKRALVAMLVIAACGGPRPKKESPIVNEGSAVPETCCCKTFPLAAEDAKPAYAMTPRMECSTTQGECVPDVQCRKTPAE
Ga0207712_1025053923300025961Switchgrass RhizosphereMKLVLALALVIAACGGPKPKPESPIVNEGSDTPENCCCKSSPLSSDDGKPLYEMLNRMECSAKQGECVPDVQCKKTGAE
Ga0207712_1138847523300025961Switchgrass RhizosphereMKLVLAISLVLAACGGPKPKPESPIVDEGSDNPESCCCKSNPLTSDDGKPVYEMSNRMECSAKQGECVPDVQCQKIQPPQ
Ga0207658_1112419513300025986Switchgrass RhizosphereMKLALALTLVLAACGSKPKPESPLVPEGADVPETCCCKSHPLSSEDGKPVFAMTNRMECSTQQGDCQPDVQCQRSDKEP
Ga0207658_1142417333300025986Switchgrass RhizosphereMKLVLALALVIAACGGPKPKPESPIVNEGSDTPENCCCKSNPLSSDDGKPLYEMLNRMECSSKQGECVPDVQCKKTGAE
Ga0207703_1087577023300026035Switchgrass RhizosphereMKLALGCALALLAACGGVKAKPESAIVNEGSDTPESCCCKASPLTSEDGKPVWEMAPRMECSTRHGTCVSDVQCRLESGAAGSGSGN
Ga0209488_1079373813300027903Vadose Zone SoilVHPVAVACYDQRMKLALALSLVLAACGGSKAKPESPIVNEGSDVPETCCCKSNPLTSEDGKPVYEAGINRMECSTKQGTCVDDVQCTQQTPTVPKDKGEGG
Ga0268265_1065500823300028380Switchgrass RhizosphereMKLVLALALALAACGGPKPKPESPIVNEGSDTPENCCCKSSPLSSDDSKPLYEMINRMECSAKQGECVPDVQCKKTGPE
Ga0268264_1004329333300028381Switchgrass RhizosphereMKLALALVLLSACSGTQPRPESPIVNEGSNTPETCCCKSFPLTSEDGRAVFEMAPRMECSTRHGTCVSDVQCRIESGAAGSGSGN
Ga0307517_1002741623300028786EctomycorrhizaMKLAPAMLLVIAACTGPKPRPASPIVEGADVPEACCCKSSPLSSEDGKPVYATDNRMECSAKQGECVPDVQCRKTAPE
Ga0307515_1004207723300028794EctomycorrhizaMKLALVTTLVLAACGGPRSKPESPLVNEGSDTPETCCCKSFPLTSDDGKPVYEMAPRMECSAKPGTCVPDVQCQASKSAQDN
Ga0302163_1013148623300028868FenMKLVLAVTLVLAACGGIQPKRESPLVNEGSDTTESCCCKTHPLSDDNKPLYQPTPRMECSTLQGECVPNVQC
Ga0302263_1011710323300028869FenMKLVLAVTLALAACGPTKAKPESALVPNVQEVPETCCCKSTPMTSDDGKPVYEMLVRMECSTRQGDCVDDVQCQKAPQPN
Ga0302254_1032190523300028870FenLLAMTLVLAGCGGTTAKRESPLVNEGSDLPADCCCKSNPLSSDDGKPVYEPTNRMECSAKPGECVPDIQCKKTQPPP
Ga0311332_1080892123300029984FenMKLLLAMTLVLAGCGGTTAKRESPLVNEGSDLPADCCCKSNPLSSDDGKPVYEPTNRMECSAKPGECVPDIQCKKTQPPP
Ga0302299_1050276223300030010FenESCYDHRMKLLLAMTLVLAGCGGTTAKRESPLVNEGSDLPADCCCKSNPLSSDDGKPVYEPTNRMECSAKPGECVPDIQCKKTQPPP
Ga0311333_10000072573300030114FenMKLVLAVTLVLAACGGIQPKRESPLVNEGSDTTESCCCKTHPLSDDNKPLYQPTPRMECSTLQGECVPNVQCTTTQPPQ
Ga0307511_1040886213300030521EctomycorrhizaMKRTFALVLLLAACSGSMAKHESPLVNEGSAVPETCCCKSSPLTSEDGKPVFQMAPRMECSAQPGECVPDVQCRGTGQGSN
Ga0307498_1042317823300031170SoilMKLPLVATLLLAACGGPQAKPESPIVNEGSDTPETCCCKAFPLTSEDGKAVFDMAPRMECSARQGTCVSDVQCRVESGAGPGSGN
Ga0307496_1000981323300031200SoilVAKSCYDQRMKLVLAMTLVLAACGGGKPRPESPIVNEGSDTPENCCCKSTPLSNDDGKPVFDMANRMECSSKQGECVPDVQCQKLDPPQ
Ga0302323_10013022933300031232FenMKLALAMMLVMAACSGAAAKRESPLVNEGPATSESCCCKSNPLTSDDGKPVYEPTIRMECSVGKQGECVPDVQCQKAPNLPPP
Ga0302323_10053660623300031232FenMKRVLAMTLVLAACGGPPPRPESPIVKEGSDVPESCCCKSNPLTSEDGKPVYNMANRMECSAQPGECVPDVQCQPSSPR
Ga0265332_1003913913300031238RhizosphereLLLAGCGGVTAKPESPVVNEGSNTPDTCCCKSFPLTSEDGKPAFEMSPRMECSARQGSCVGDVQCRTEAGAGSGH
Ga0307509_10000060493300031507EctomycorrhizaMKLVLAMMLVLAACGGTKPRRESPLVNEGSDTPESCCCKSNPLTSEDGKPVYEPTIRMECSSMKQGECVPDIQCQRAPNQPPS
Ga0307509_1001861553300031507EctomycorrhizaMKLALVILLLAACGGPKAKPESAIVNEGSDTPETCCCKSFPLTSEDGKAVWEMAARMECSARQGECVSDVQCRKSDSDVAPAPGSGSGSGG
Ga0307509_1002039553300031507EctomycorrhizaMKLARIILLLAACGGPLAKPESPLVNEGSDTPETCCCKSFPLTSEDGKPVYAMAPRMECSTRQGECVADVQCRGEAGSAN
Ga0307509_1003456343300031507EctomycorrhizaVSGTCYDRRMKLALALTLLLAACGSKPKPESPIVDEGSDVPETCCCMTRPLTSLDGHWVYAMANRIECSTQQGECMPDVQCQAFTPTKPSDRITK
Ga0307508_1061503313300031616EctomycorrhizaMKRVLAMTLVIAACSGPAARPESPIVKEGSDVPESCCCKSNPLTSEDGKPVYNMTNRMECSAQPGECVPDVRCQKTEPK
Ga0307508_1075073213300031616EctomycorrhizaMKLVLAMALVLAACGGPKPKRESPIVNEGSDTPENCCCKSNPLTSDDGKPVYEPTIRMECSSGKQGECVPDVQCQK
Ga0307476_1002090343300031715Hardwood Forest SoilMKSALVAMLLLAACGGPQAKPESPIVNEGSDTPETCCCKSFPLTSEDGKPVYEMAPRMECSARQGTCGPDVQCRVESGSGS
Ga0307469_1069626123300031720Hardwood Forest SoilMKLVAIMLLLAACGGPKARPESAIVNEGSDTPETCCCKSFPLTSEDGKPVYEMAPRMECSTRQGECVSDVQCRQSDARPDAGSGR
Ga0307469_1125550223300031720Hardwood Forest SoilMKLPLVATLLLAACGGPQAKPESSIVNEGSDTPETCCCKSFPLTSEDGKPVYEMAPRMECSARQGVCVNDVQCHVESGTGPGSGN
Ga0307516_1003405443300031730EctomycorrhizaMKLVLAVTLALAACGGIQPKRESPLVNEGSDTAESCCCKTHPLSDDNKPLYQPTPRMECSTLQGECVPNVQCTTTQPAQ
Ga0307516_1011892033300031730EctomycorrhizaMKLVLAMMLVGAACSGIAPRRESPLVNEGSATSESCCCKSNPLTSDDGKPVYEPTIRMECSSGKQGECVPDVQCQKAPNQPPR
Ga0307468_10112946523300031740Hardwood Forest SoilCYHRRMKRALALLVMLAACGGPKPKKESPIVNEGSDVPETCCCKSFPLSAEDGKAAYAMAPRMECSTKQGECVADVQCQKTQPE
Ga0311367_1067535923300031918FenVTRAPRRDRRTSRPDSCYDVAMKLVLAVTLVLAACGGPKPKPESAIVDEGSDTPASCCCKATPITSEDGKPGFTMVNRMECSAQQGACVPDVQCAKAAPAN
Ga0308175_100000276123300031938SoilVEYDQRMKLVLTLALVLTACGGPKPKPESPIVNEGSDTPENCCCKSSPLSSDDGKPLYEMLNRMECSSKQGECVPDVQCKKTGPD
Ga0308175_10119422413300031938SoilMKLALVALLLAACGGPHAKPESAIVKEGSDVPETCCCKSFPLTSEDGKAVWEMAARMECSSRQGEC
Ga0308176_1062047323300031996SoilMKHALIILLLAACGGPTAKPESAIVKEGSDVPETCCCKSFPLTSEDGKAVWEMAARMECSSRQGECVPDVQCRKSDSDVSPGAGSGSGSGG
Ga0308173_1122087513300032074SoilMKLVLALTLVLAACGGTQPKPESPIVNEGSDTPENCCCKSTSLANDDGKPVFEMANRMECSSKQGECVPDVQCQK
Ga0307472_10109246813300032205Hardwood Forest SoilMKLVLAILLVLAACGGTKPKPESPLVEEGSDNPESCCCKATSLTSEDGKPSYDMANRMECSSKQGECVPDVQCQKLDPPQ
Ga0307507_1012219423300033179EctomycorrhizaMKLVLAMALLVLGCGGVKAKPESPFVNEGSDTPESCCCKSFPLTSEDGKPVYAMANRMECSEQQGECVADVQCRKTDDAAAPPTTR
Ga0316605_1002960033300033408SoilMTTLKKLALGLVIVTAACSGPKAKPSSTIVNEGSDTPESCCCKSNPLTSEDGKPVFEQANRMECSSKQGECVGEVQCQPQAPTEPTPTPTP
Ga0372943_0008646_4729_49803300034268SoilMKLAVVIALVVAACGGPRAKPESPLVNEGSDVPETCCCKSFPLTSEDGKPVYEMQPRMECSARPGECVPDVQCQASKAATPER

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Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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