Metagenome Family F057831

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F057831
Family Type	Metagenome
Number of Sequences	135
Average Sequence Length	79 residues
Representative Sequence	MMPAPRSSGFEREVAAETLAAALSPLSVRAIQQRLERILIDDRELLISLQCQLEQIRRELRLLNDERIVRALDGVDRPISH
Number of Associated Samples	74
Number of Associated Scaffolds	135

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	77.04 %
% of genes near scaffold ends (potentially truncated)	28.15 %
% of genes from short scaffolds (< 2000 bps)	69.63 %
Associated GOLD sequencing projects	72
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.42

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (57.778 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen (27.407 % of family members)
Environment Ontology (ENVO)	Unclassified (39.259 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (52.593 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 55.96% β-sheet: 0.00% Coil/Unstructured: 44.04%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.42
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.42
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 135 Family Scaffolds
PF02561	FliS	37.78
PF00072	Response_reg	15.56
PF13524	Glyco_trans_1_2	7.41
PF00700	Flagellin_C	3.70
PF03705	CheR_N	2.96
PF01966	HD	2.96
PF07195	FliD_C	2.22
PF01041	DegT_DnrJ_EryC1	1.48
PF13561	adh_short_C2	0.74
PF02049	FliE	0.74
PF04316	FlgM	0.74
PF01739	CheR	0.74
PF06289	FlbD	0.74
PF03748	FliL	0.74
PF04023	FeoA	0.74
PF07196	Flagellin_IN	0.74
PF03646	FlaG	0.74
PF00460	Flg_bb_rod	0.74
PF05523	FdtA	0.74

COG ID	Name	Functional Category	% Frequency in 135 Family Scaffolds
COG1516	Flagellin-specific chaperone FliS	Cell motility [N]	113.33
COG1352	Methylase of chemotaxis methyl-accepting proteins	Signal transduction mechanisms [T]	7.41
COG1344	Flagellin and related hook-associated protein FlgL	Cell motility [N]	4.44
COG1345	Flagellar capping protein FliD	Cell motility [N]	2.96
COG2747	Negative regulator of flagellin synthesis (anti-sigma28 factor)	Transcription [K]	2.22
COG0399	dTDP-4-amino-4,6-dideoxygalactose transaminase	Cell wall/membrane/envelope biogenesis [M]	1.48
COG0436	Aspartate/methionine/tyrosine aminotransferase	Amino acid transport and metabolism [E]	1.48
COG0520	Selenocysteine lyase/Cysteine desulfurase	Amino acid transport and metabolism [E]	1.48
COG0626	Cystathionine beta-lyase/cystathionine gamma-synthase	Amino acid transport and metabolism [E]	1.48
COG1104	Cysteine desulfurase/Cysteine sulfinate desulfinase IscS or related enzyme, NifS family	Amino acid transport and metabolism [E]	1.48
COG1256	Flagellar hook-associated protein FlgK	Cell motility [N]	1.48
COG1677	Flagellar hook-basal body complex protein FliE	Cell motility [N]	1.48
COG2873	O-acetylhomoserine/O-acetylserine sulfhydrylase, pyridoxal phosphate-dependent	Amino acid transport and metabolism [E]	1.48
COG1334	Uncharacterized conserved protein, FlaG/YvyC family	General function prediction only [R]	0.74
COG1558	Flagellar basal body rod protein FlgC	Cell motility [N]	0.74
COG1580	Flagellar basal body-associated protein FliL	Cell motility [N]	0.74
COG1582	Swarming motility protein SwrD	Cell motility [N]	0.74
COG1749	Flagellar hook protein FlgE	Cell motility [N]	0.74
COG1815	Flagellar basal body rod protein FlgB	Cell motility [N]	0.74
COG1918	Fe2+ transport protein FeoA	Inorganic ion transport and metabolism [P]	0.74
COG2226	Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG	Coenzyme transport and metabolism [H]	0.74
COG4786	Flagellar basal body rod protein FlgG	Cell motility [N]	0.74
COG4787	Flagellar basal body rod protein FlgF	Cell motility [N]	0.74

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.78 %
All Organisms	root	All Organisms	42.22 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.78 %
cellular organisms	root	All Organisms → cellular organisms	42.22 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.78 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	42.22 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.78 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	14.81 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.78 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	10.37 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	4.44 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.78 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	10.37 %
Clostridia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	0.74 %
Bacilli	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli	0.74 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.78 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	10.37 %
Bacillales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales	0.74 %
Clostridia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	0.74 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.74 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2124908028\|beta3_all_NODE_36428_len_1174_cov_6_288756	All Organisms → cellular organisms → Bacteria	1224	Open in IMG/M
3300001213\|JGIcombinedJ13530_102547544	Not Available	695	Open in IMG/M
3300003369\|JGI24140J50213_10024621	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2237	Open in IMG/M
3300009519\|Ga0116108_1018104	Not Available	2460	Open in IMG/M
3300009552\|Ga0116138_1000144	All Organisms → cellular organisms → Bacteria	47098	Open in IMG/M
3300014490\|Ga0182010_10001731	All Organisms → cellular organisms → Bacteria	11384	Open in IMG/M
3300014490\|Ga0182010_10006560	All Organisms → cellular organisms → Bacteria	5393	Open in IMG/M
3300014490\|Ga0182010_10013232	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	3725	Open in IMG/M
3300014490\|Ga0182010_10065957	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	1756	Open in IMG/M
3300014490\|Ga0182010_10223958	All Organisms → cellular organisms → Bacteria	992	Open in IMG/M
3300014490\|Ga0182010_10291978	Not Available	873	Open in IMG/M
3300014490\|Ga0182010_10353250	Not Available	796	Open in IMG/M
3300014490\|Ga0182010_10391989	Not Available	756	Open in IMG/M
3300014494\|Ga0182017_10000017	All Organisms → cellular organisms → Bacteria	112628	Open in IMG/M
3300014494\|Ga0182017_10002042	All Organisms → cellular organisms → Bacteria	15476	Open in IMG/M
3300014494\|Ga0182017_10014835	All Organisms → cellular organisms → Bacteria	5452	Open in IMG/M
3300014494\|Ga0182017_10020970	All Organisms → cellular organisms → Bacteria	4514	Open in IMG/M
3300014494\|Ga0182017_10037042	Not Available	3291	Open in IMG/M
3300014494\|Ga0182017_10251961	Not Available	1115	Open in IMG/M
3300014496\|Ga0182011_10024231	All Organisms → cellular organisms → Bacteria	4399	Open in IMG/M
3300014496\|Ga0182011_11004391	Not Available	517	Open in IMG/M
3300014498\|Ga0182019_10003547	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	7970	Open in IMG/M
3300014498\|Ga0182019_10037565	All Organisms → cellular organisms → Bacteria	2745	Open in IMG/M
3300014498\|Ga0182019_10059326	All Organisms → cellular organisms → Bacteria	2239	Open in IMG/M
3300014498\|Ga0182019_10641244	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	749	Open in IMG/M
3300014498\|Ga0182019_10662729	Not Available	737	Open in IMG/M
3300014498\|Ga0182019_10706834	Not Available	715	Open in IMG/M
3300014502\|Ga0182021_10009322	All Organisms → cellular organisms → Bacteria	11630	Open in IMG/M
3300014502\|Ga0182021_10040310	All Organisms → cellular organisms → Bacteria	5477	Open in IMG/M
3300014502\|Ga0182021_10418049	Not Available	1592	Open in IMG/M
3300014502\|Ga0182021_10839177	Not Available	1104	Open in IMG/M
3300014502\|Ga0182021_11476974	Not Available	819	Open in IMG/M
3300014502\|Ga0182021_12240535	Not Available	658	Open in IMG/M
3300014502\|Ga0182021_12582168	Not Available	611	Open in IMG/M
3300014502\|Ga0182021_12846283	Not Available	581	Open in IMG/M
3300014502\|Ga0182021_13775731	Not Available	502	Open in IMG/M
3300014839\|Ga0182027_10002457	All Organisms → cellular organisms → Bacteria	30076	Open in IMG/M
3300014839\|Ga0182027_10019688	All Organisms → cellular organisms → Bacteria	9076	Open in IMG/M
3300014839\|Ga0182027_10029860	All Organisms → cellular organisms → Bacteria → Proteobacteria	7104	Open in IMG/M
3300014839\|Ga0182027_10036138	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales	6356	Open in IMG/M
3300014839\|Ga0182027_10116807	Not Available	3187	Open in IMG/M
3300017929\|Ga0187849_1000414	All Organisms → cellular organisms → Bacteria	58861	Open in IMG/M
3300018005\|Ga0187878_1000385	All Organisms → cellular organisms → Bacteria	51904	Open in IMG/M
3300019788\|Ga0182028_1251604	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1322	Open in IMG/M
3300023258\|Ga0224535_1037382	Not Available	1136	Open in IMG/M
3300023311\|Ga0256681_10645998	Not Available	546	Open in IMG/M
3300023311\|Ga0256681_12060059	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1167	Open in IMG/M
3300025533\|Ga0208584_1003489	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	3897	Open in IMG/M
3300025888\|Ga0209540_10343826	Not Available	833	Open in IMG/M
3300025888\|Ga0209540_10599787	Not Available	557	Open in IMG/M
3300027896\|Ga0209777_10000462	All Organisms → cellular organisms → Bacteria	67491	Open in IMG/M
3300028556\|Ga0265337_1007663	All Organisms → cellular organisms → Bacteria	4019	Open in IMG/M
3300028556\|Ga0265337_1189886	Not Available	558	Open in IMG/M
3300028556\|Ga0265337_1198698	Not Available	544	Open in IMG/M
3300028573\|Ga0265334_10047346	Not Available	1659	Open in IMG/M
3300028649\|Ga0302162_10121568	Not Available	618	Open in IMG/M
3300028652\|Ga0302166_10016698	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1415	Open in IMG/M
3300028653\|Ga0265323_10105195	Not Available	930	Open in IMG/M
3300028654\|Ga0265322_10153933	Not Available	657	Open in IMG/M
3300028666\|Ga0265336_10116825	Not Available	795	Open in IMG/M
3300028674\|Ga0302161_10162666	Not Available	584	Open in IMG/M
3300028732\|Ga0302264_1017899	All Organisms → cellular organisms → Bacteria	1628	Open in IMG/M
3300028741\|Ga0302256_10033925	All Organisms → cellular organisms → Bacteria	1277	Open in IMG/M
3300028800\|Ga0265338_10879192	Not Available	611	Open in IMG/M
3300028800\|Ga0265338_10940374	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	587	Open in IMG/M
3300028865\|Ga0302291_10348128	Not Available	510	Open in IMG/M
3300028869\|Ga0302263_10150691	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	927	Open in IMG/M
3300029957\|Ga0265324_10217808	Not Available	648	Open in IMG/M
3300029984\|Ga0311332_10606292	All Organisms → cellular organisms → Bacteria	865	Open in IMG/M
3300029984\|Ga0311332_11007054	Not Available	669	Open in IMG/M
3300029990\|Ga0311336_10125374	All Organisms → cellular organisms → Bacteria	2052	Open in IMG/M
3300029995\|Ga0302210_10222256	Not Available	531	Open in IMG/M
3300030002\|Ga0311350_10448993	Not Available	1157	Open in IMG/M
3300030019\|Ga0311348_10143363	All Organisms → cellular organisms → Bacteria	1773	Open in IMG/M
3300030047\|Ga0302286_10180693	Not Available	1067	Open in IMG/M
3300030047\|Ga0302286_10410580	Not Available	683	Open in IMG/M
3300030114\|Ga0311333_10055891	Not Available	2842	Open in IMG/M
3300030114\|Ga0311333_10228042	All Organisms → cellular organisms → Bacteria	1458	Open in IMG/M
3300030114\|Ga0311333_10932062	Not Available	734	Open in IMG/M
3300030294\|Ga0311349_11346675	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	664	Open in IMG/M
3300030294\|Ga0311349_11729707	Not Available	578	Open in IMG/M
3300030294\|Ga0311349_11907949	Not Available	547	Open in IMG/M
3300030339\|Ga0311360_11009727	Not Available	657	Open in IMG/M
3300030838\|Ga0311335_10666991	Not Available	730	Open in IMG/M
3300030943\|Ga0311366_11424471	Not Available	595	Open in IMG/M
3300031232\|Ga0302323_100150771	All Organisms → cellular organisms → Bacteria	2307	Open in IMG/M
3300031232\|Ga0302323_101014523	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	922	Open in IMG/M
3300031232\|Ga0302323_101430657	Not Available	777	Open in IMG/M
3300031235\|Ga0265330_10333123	Not Available	641	Open in IMG/M
3300031238\|Ga0265332_10423692	Not Available	550	Open in IMG/M
3300031242\|Ga0265329_10125145	Not Available	826	Open in IMG/M
3300031344\|Ga0265316_10936432	Not Available	604	Open in IMG/M
3300031521\|Ga0311364_11246377	Not Available	738	Open in IMG/M
3300031521\|Ga0311364_11800467	Not Available	602	Open in IMG/M
3300031722\|Ga0311351_10382267	Not Available	1066	Open in IMG/M
3300031722\|Ga0311351_10425566	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1006	Open in IMG/M
3300031722\|Ga0311351_11552556	Not Available	510	Open in IMG/M
3300031726\|Ga0302321_101242049	Not Available	854	Open in IMG/M
3300031902\|Ga0302322_100708978	Not Available	1194	Open in IMG/M
3300031918\|Ga0311367_10163220	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2343	Open in IMG/M
3300031918\|Ga0311367_10860434	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	914	Open in IMG/M
3300031918\|Ga0311367_11174310	Not Available	763	Open in IMG/M
3300031918\|Ga0311367_11694136	Not Available	616	Open in IMG/M
3300032770\|Ga0335085_10331253	Not Available	1791	Open in IMG/M
3300032828\|Ga0335080_11895614	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	580	Open in IMG/M
3300032829\|Ga0335070_10504729	Not Available	1146	Open in IMG/M
3300032893\|Ga0335069_10943083	Not Available	962	Open in IMG/M
3300032897\|Ga0335071_10533878	Not Available	1125	Open in IMG/M
3300032897\|Ga0335071_10557312	All Organisms → cellular organisms → Bacteria	1098	Open in IMG/M
3300032955\|Ga0335076_10020158	All Organisms → cellular organisms → Bacteria	6693	Open in IMG/M
3300032955\|Ga0335076_10381347	All Organisms → cellular organisms → Bacteria	1295	Open in IMG/M
3300033004\|Ga0335084_12466065	Not Available	500	Open in IMG/M
3300033433\|Ga0326726_11667567	Not Available	621	Open in IMG/M
3300033486\|Ga0316624_10018953	All Organisms → cellular organisms → Bacteria	3814	Open in IMG/M
3300033489\|Ga0299912_10220717	Not Available	1621	Open in IMG/M
3300033743\|Ga0334844_028602	Not Available	1087	Open in IMG/M
3300033820\|Ga0334817_000901	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	7768	Open in IMG/M
3300033820\|Ga0334817_100515	Not Available	557	Open in IMG/M
3300033821\|Ga0334818_000144	All Organisms → cellular organisms → Bacteria	27433	Open in IMG/M
3300033825\|Ga0334843_000342	All Organisms → cellular organisms → Bacteria	7976	Open in IMG/M
3300033825\|Ga0334843_064402	Not Available	529	Open in IMG/M
3300033827\|Ga0334848_000078	All Organisms → cellular organisms → Bacteria	26810	Open in IMG/M
3300033827\|Ga0334848_098048	Not Available	518	Open in IMG/M
3300033891\|Ga0334811_143446	Not Available	593	Open in IMG/M
3300033891\|Ga0334811_181378	Not Available	513	Open in IMG/M
3300034158\|Ga0370507_0196804	Not Available	653	Open in IMG/M
3300034170\|Ga0370487_0351989	Not Available	504	Open in IMG/M
3300034195\|Ga0370501_0003466	All Organisms → cellular organisms → Bacteria	3970	Open in IMG/M
3300034195\|Ga0370501_0004281	Not Available	3644	Open in IMG/M
3300034195\|Ga0370501_0006535	All Organisms → cellular organisms → Bacteria	3057	Open in IMG/M
3300034195\|Ga0370501_0018083	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2028	Open in IMG/M
3300034195\|Ga0370501_0316732	Not Available	564	Open in IMG/M
3300034195\|Ga0370501_0337239	Not Available	547	Open in IMG/M
3300034195\|Ga0370501_0351690	Not Available	536	Open in IMG/M
3300034358\|Ga0370485_0065165	Not Available	983	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	89.63%
Host-Associated	Host-Associated	10.37%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	83.70%
Plants	Host-Associated → Plants	10.37%
Aquatic	Environmental → Aquatic	5.93%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	46.67%
Peat	Environmental → Terrestrial → Peat	37.04%
Rhizosphere	Host-Associated → Plants → Rhizosphere	10.37%
Freshwater	Environmental → Aquatic → Freshwater	5.19%
Marine	Environmental → Aquatic → Marine	0.74%

Habitat	Taxonomy	Distribution
Wetlands	Environmental → Terrestrial → Soil → Wetlands	42.22%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	37.04%
Soil	Host-Associated → Plants → Rhizosphere → Soil	10.37%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	4.44%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	2.96%
Lake	Environmental → Aquatic → Freshwater → Lake	1.48%
Lentic	Environmental → Aquatic → Freshwater → Lentic	0.74%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.74%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	37.04%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	27.41%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	14.81%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	10.37%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	3.70%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	1.48%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	1.48%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.48%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	0.74%
Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment	0.74%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.74%

Habitat	Taxonomy	Distribution
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	27.41%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	27.41%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	10.37%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	8.15%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	7.41%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	7.41%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	2.96%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	1.48%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	1.48%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	1.48%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	0.74%
Wetland	Environmental → Aquatic → Marine → Wetlands → Sediment → Wetland	0.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Soil	0.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.74%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	0.74%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.74%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2124908028	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Bog Site B3	Environmental	Open in IMG/M
3300001213	Combined assembly of wetland microbial communities from Twitchell Island in the Sacramento Delta (Jan 2013 JGI Velvet Assembly)	Environmental	Open in IMG/M
3300003369	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Incubations 002-22A	Environmental	Open in IMG/M
3300009519	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_150	Environmental	Open in IMG/M
3300009552	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_150	Environmental	Open in IMG/M
3300014490	Permafrost microbial communities from Stordalen Mire, Sweden - 611E1M metaG	Environmental	Open in IMG/M
3300014494	Permafrost microbial communities from Stordalen Mire, Sweden - 712E3D metaG	Environmental	Open in IMG/M
3300014496	Permafrost microbial communities from Stordalen Mire, Sweden - 711E1D metaG	Environmental	Open in IMG/M
3300014498	Permafrost microbial communities from Stordalen Mire, Sweden - 812E2M metaG	Environmental	Open in IMG/M
3300014502	Permafrost microbial communities from Stordalen Mire, Sweden - 612E3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014839	Permafrost microbial communities from Stordalen Mire, Sweden - 712E1D metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300017929	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_100	Environmental	Open in IMG/M
3300018005	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_150	Environmental	Open in IMG/M
3300019788	Permafrost microbial communities from Stordalen Mire, Sweden - 712E1D metaG (PacBio error correction)	Environmental	Open in IMG/M
3300023258	Peat soil microbial communities from Stordalen Mire, Sweden - 717 E1 30-34	Environmental	Open in IMG/M
3300023311	Combined Assembly of Gp0281739, Gp0281740, Gp0281741	Environmental	Open in IMG/M
3300025533	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-1 deep-072012 (SPAdes)	Environmental	Open in IMG/M
3300025888	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Incubations 011-21A (SPAdes)	Environmental	Open in IMG/M
3300027896	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies -HBP12 HB (SPAdes)	Environmental	Open in IMG/M
3300028556	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG	Host-Associated	Open in IMG/M
3300028573	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG	Host-Associated	Open in IMG/M
3300028649	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_E2_2	Environmental	Open in IMG/M
3300028652	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_E3_3	Environmental	Open in IMG/M
3300028653	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG	Host-Associated	Open in IMG/M
3300028654	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG	Host-Associated	Open in IMG/M
3300028666	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG	Host-Associated	Open in IMG/M
3300028674	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_E2_1	Environmental	Open in IMG/M
3300028732	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Fen_N3_4	Environmental	Open in IMG/M
3300028741	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_E3_4	Environmental	Open in IMG/M
3300028800	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG	Host-Associated	Open in IMG/M
3300028865	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_N1_4	Environmental	Open in IMG/M
3300028869	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Fen_N1_4	Environmental	Open in IMG/M
3300029957	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG	Host-Associated	Open in IMG/M
3300029984	I_Fen_E1 coassembly	Environmental	Open in IMG/M
3300029990	I_Fen_N2 coassembly	Environmental	Open in IMG/M
3300029995	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Fen_E3_2	Environmental	Open in IMG/M
3300030002	II_Fen_N1 coassembly	Environmental	Open in IMG/M
3300030019	II_Fen_E2 coassembly	Environmental	Open in IMG/M
3300030047	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_E2_3	Environmental	Open in IMG/M
3300030114	I_Fen_E2 coassembly	Environmental	Open in IMG/M
3300030294	II_Fen_E3 coassembly	Environmental	Open in IMG/M
3300030339	III_Bog_N1 coassembly	Environmental	Open in IMG/M
3300030838	I_Fen_N1 coassembly	Environmental	Open in IMG/M
3300030943	III_Fen_N2 coassembly	Environmental	Open in IMG/M
3300031232	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_3	Environmental	Open in IMG/M
3300031235	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG	Host-Associated	Open in IMG/M
3300031238	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG	Host-Associated	Open in IMG/M
3300031242	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG	Host-Associated	Open in IMG/M
3300031344	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG	Host-Associated	Open in IMG/M
3300031521	III_Fen_E2 coassembly	Environmental	Open in IMG/M
3300031722	II_Fen_N3 coassembly	Environmental	Open in IMG/M
3300031726	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_1	Environmental	Open in IMG/M
3300031902	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_2	Environmental	Open in IMG/M
3300031918	III_Fen_N3 coassembly	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032829	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M
3300032897	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.5	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M
3300033004	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M
3300033486	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_N3_C1_D5_A	Environmental	Open in IMG/M
3300033489	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT95D214	Environmental	Open in IMG/M
3300033743	Peat soil microbial communities from Stordalen Mire, Sweden - 714 E1 5-9	Environmental	Open in IMG/M
3300033820	Peat soil microbial communities from Stordalen Mire, Sweden - 713 E-2-D	Environmental	Open in IMG/M
3300033821	Peat soil microbial communities from Stordalen Mire, Sweden - 713 E-2-X0	Environmental	Open in IMG/M
3300033825	Peat soil microbial communities from Stordalen Mire, Sweden - 714 E1 1-5	Environmental	Open in IMG/M
3300033827	Peat soil microbial communities from Stordalen Mire, Sweden - 714 E2 5-9	Environmental	Open in IMG/M
3300033891	Peat soil microbial communities from Stordalen Mire, Sweden - 713 E-1-D	Environmental	Open in IMG/M
3300034158	Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_06D_18	Environmental	Open in IMG/M
3300034170	Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_03D_16	Environmental	Open in IMG/M
3300034195	Peat soil microbial communities from wetlands in Alaska, United States - Sheep_creek_fen_01D_17	Environmental	Open in IMG/M
3300034358	Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_01D_16	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
beta3_all_00489620	2124908028	Soil	MISAAESNSMEKQIAAETLAATMSPISVRSIQRRLERLLIDDRELLISLQCQLEQIRRELRLLNDERIVRALDGGEPSFRH
JGIcombinedJ13530_1025475442	3300001213	Wetland	MNPGPQLQTIEHRIASETLSAALSPLSMRSVQARLERLLIDDRELLISLQCQLEQIRRELRLLNDDRILRVLDAEPPLRH*
JGI24140J50213_100246212	3300003369	Arctic Peat Soil	MMPGTQQTTMEREVAAETLAAALSPLSVRSIQRRLERLLLDDRELLISLQCQLEQIRRELRLLNDERIVRALGSQDPPLSH*
Ga0116108_10181043	3300009519	Peatland	MERQVAAGTLAVAMSPRSMRSIQQRLERILIDDRELLISLQCQLEQIRRELRLLNDERIVHALDGGDPPIRH*
Ga0116138_100014429	3300009552	Peatland	MERQVAAETLAVPMSPRSMRSIQQRLERILIDDRELLISLQCQLEQIRRELRLLNDERIVHALDGGDPPIRH*
Ga0182010_100017313	3300014490	Fen	MMPAPQANHIERQIAAETLAAALSPLSVRAIQRRLERILIDDRELLISLQCQLEQIRRELRLLNDDRILRVLDGQDRPISN*
Ga0182010_100065603	3300014490	Fen	MIPRGLATQSMERQVAAETLAAALSPLSVRAIQQRLERILIDDRELLISLQCQLEQIRRELRLLNDDRIVRALDGGDQPIRH*
Ga0182010_100132323	3300014490	Fen	MISATESNSMERQIAAETLAATMSPLSVRSIQRRLERLLIDDRELLISLQCQLEQIRRELRLLNDDRIVRALDGGEPPFRH*
Ga0182010_100659572	3300014490	Fen	MERQVAAETLAAALSPLSVRSIQRRLERILLDDRELLISLQCQLEQIRRELRLLNDERIVCALDGGDRPIRH*
Ga0182010_102239582	3300014490	Fen	MMPASRQTTMERAVAAETLGAALGPHSVRGIQHRLERILIDDRELLISLQCQLEQIRRELRLLNDERIVRALDGAERPVSN*
Ga0182010_102919782	3300014490	Fen	MMAGGHPTTMERQVAAETLAAALSPLSVRAIQRRLERILLDDRELLISLQCQLEQIRRELRLLNDERIVTALGGSDPPISH*
Ga0182010_103532502	3300014490	Fen	MMPAPRSSGFEREVAAETLAAALSPLSVRAIQQRLERILIDDRELLISLQCQLEQIRRELRLLNDERIVRALDGVDRPISH*
Ga0182010_103919892	3300014490	Fen	MMPFPQQSKIEREVAAETLAAALSPLSVRAIQQRLERILIDDRELLISLQCQLEQIRRELRLLNDERIVRALSPGDHPISH*
Ga0182017_1000001786	3300014494	Fen	MPAPQQGSRMQQAVAAETLAAALSPLSVRAIQQRLERILLDDRELLISLQCQLEQIRRELRLLNDDRIVRVLDVQDRPISH*
Ga0182017_1000204213	3300014494	Fen	MMPAPRASTIEREVAAETLAAALSPLSVRAIQQRLERILIDDRELLISLQCQLEQIRRELRLLNDERIVRALDAGDHPIRN*
Ga0182017_100148352	3300014494	Fen	MMPFPQQSKIEREVAAETLAAALSPLSVRAIQQRLERILIDDRELLISLQCQLEQIRRELRLLNDERIVRALAPGDHPISH*
Ga0182017_100209702	3300014494	Fen	MISPGQPDALKRQVAAETLAASLSPISVRSIQQRLECLLIDDRELLISLQCQLEQIRREIRLLNDERIVNALGGEDTPLHH*
Ga0182017_100370422	3300014494	Fen	MMPIPSGNSIEREVAAETLAAALSPLSVRAIQQRLERLLIDDRELLISLQCQLEQIRRELRLLNDERIVRALDGQDHPIRN*
Ga0182017_102519612	3300014494	Fen	LVAAETLAAALSPLSVRSIQQRLERLLIDDRELLISLQCQLEQIRRELRLLNDQRIVVALGHEDAPLRH*
Ga0182011_100242313	3300014496	Fen	MIAADQPSAMERLVAAETLAAALSPLSVRSIQQRLERLLIDDRELLISLQCQLEQIRRELRLLNDQRIVVALGHEDAPLRH*
Ga0182011_110043912	3300014496	Fen	MMPAPRGSEIERDVAAETLAAALSPRSVRAIQQRLERILLDDRELLISLQCQLEQIRRELRLLNDDRIVRALD
Ga0182019_100035475	3300014498	Fen	MMPSPNGSSIERQVAAETLSAALSPLSVRAIQHRLERILLDDRELLISLQCQLEQIRRELRLLNDDRIVRALEDVERPISH*
Ga0182019_100375653	3300014498	Fen	MMPGPRGSSIERAVAAETLAAALSPLSVRSIQRRLEQILLDDRELLISLQCQLEQIRRELRLLNDDRIVRAIDNLDRPVSH*
Ga0182019_100593263	3300014498	Fen	MMPLPQSRSIEREVAAETLAAALSPLSVRAIQQRLERILIDDRELLISLQCQLEQIRRELRLLNDERIVRALDHRDFPISN*
Ga0182019_106412441	3300014498	Fen	AAETLAAAMSPLSVRGIQRRLERILIDDRELLISVQCQLEQIRRELRLLNDERIVRALDGVEPTIQN*
Ga0182019_106627291	3300014498	Fen	RLVAAETLAAALSPLSVRSIQQRLERLLIDDRELLISLQCQLEQIRRELRLLNDQRIVVALGHEDAPLRH*
Ga0182019_107068341	3300014498	Fen	MMPVPRSSGFEREVAAETLAAALSPLSVRAIQQRLERILIDDRELLISLQCQLEQIRRELRLLNDERIVRALDGVDRPISH*
Ga0182021_100093225	3300014502	Fen	MPASRQTTMERAVAAETLGAALGPHSVRGIQHRLERILIDDRELLISLQCQLEQIRRELRLLNDERIVRALDGAERPVSN*
Ga0182021_100403102	3300014502	Fen	MPAPQQGSRMQQAVAAETLAAALSPLSVRAIQQRLERMLLDDRELLISLQCQLEQIRRELRLLNDERIVRALDHRDFPISN*
Ga0182021_104180491	3300014502	Fen	RSMERRTTAETLTVSAHALPVASVQERLEKILIDDRELLISLRCQLDQIRRELRLLNDERIVRALDGEDPAIRH*
Ga0182021_108391772	3300014502	Fen	IPTDMPGTMERQVAAETLAAALSPLSVRSIQRRLERILIDDRELLISLQCQLEQIRRELRLLNDDRIVRALDGEDASYRH*
Ga0182021_114769742	3300014502	Fen	MSVPQRSAIEREVAAETLAAAMGPLSVRSIQKRLERILIDDRELLISLQCQLEQIRRELRLLNDDRIVRALDGRDLPVRN*
Ga0182021_122405352	3300014502	Fen	MMPLAPQPQMLSIEHRVAAETLAAALRPAPSRTIQQRLERLLIDDRELLISLQCQLEQIRREIRLLNDERIVHALAGRDPEIAN*
Ga0182021_125821681	3300014502	Fen	VISPTGSSSIERQIAAETMAATLSPLSIRSIQRRLERLLIDDRELLISLQCQLEQIRRELRLLNDERIVHALDGSEMPFRH*
Ga0182021_128462832	3300014502	Fen	MISATEPNSMERQIAAETLAATMSPLSVRSIQRRLERLLIDDRELLISLQCQLEQIRRELRLLNDDRIVRALDGGEPPFRH*
Ga0182021_137757311	3300014502	Fen	TSMMAGGHPTTMERQVAAETLAAALSPLSVRAIQRRLERILLDDRELLISLQCQLEQIRRELRLLNDERIVSALGGIDPPISH*
Ga0182027_1000245731	3300014839	Fen	MMQVPHPSTMEREVAAETLAAALSPLSVRAIQRRLERILLDDRELLISLQCQLEQIRRELRLLNDERVVRALDGGDHPIRH*
Ga0182027_100196886	3300014839	Fen	MMPGSRGSTIEREVAAETLAAALSPLSVRAIQQRLERILIDDRELLISLQCQLEQIRRELRLLNDERIVRVLDSQDHPIRH*
Ga0182027_100298607	3300014839	Fen	MMPAPHGSTIEREVAAETLAAALSPLSVRAIQHRLERILLDDRELLISLQCQLEQIRRELRLLNDDRIVRAIDGGDRPLRH*
Ga0182027_100361385	3300014839	Fen	MMPGPDRSKMEREVATEMLVAAMSPLSARSIQQRLERILIDDRELLISLQCQLEQIRRELRLMNDDRIVRVLSRSDRPISN*
Ga0182027_101168072	3300014839	Fen	MMPTQPGTTIERQVAAETIAASLSPLSVRSIQRRLERILIDDRELLISLQCQLEQIRREIRLLNDERIVRALDTGDHPISH*
Ga0187849_100041431	3300017929	Peatland	MMPDGHGSSMERQVAAGTLAVAMSPRSMRSIQQRLERILIDDRELLISLQCQLEQIRRELRLLNDERIVHALDGGDPPIRH
Ga0187878_100038531	3300018005	Peatland	MMPDGHGSSMERQVAAETLAVPMSPRSMRSIQQRLERILIDDRELLISLQCQLEQIRRELRLLNDERIVHALDGGDPPIRH
Ga0182028_12516042	3300019788	Fen	MISPGQPDALKRQVAAETLAASLSPISVRSIQQRLECLLIDDRELLISLQCQLEQIRREIRLLNDERIVNALGGEDTPLHH
Ga0224535_10373822	3300023258	Soil	MMPTPGGRTIEREVAAETLVAALSPISVRAIQQRLERILIDDRELLISLQCQLEQIRRELRLLNDERIVRALDSQDHPIRN
Ga0256681_106459981	3300023311	Freshwater	MMPAGHRSMERRTTAETLTVSAHALPVASVQERLEKILIDDRELLISLRCQLDQIRRELRLLNDERIVRALDGEDPAIRH
Ga0256681_120600593	3300023311	Freshwater	MIPGGHPTPMERQVAAETLAAALSPLSVRSIQRRLERILLDDRELLISLQCQLEQIRRELRLLNDERIVCALDGGDRPIRH
Ga0208584_10034893	3300025533	Arctic Peat Soil	MMPGPRQSTMEREVAAETLAATLSPLSVRAIQRRLERLLLDDRELLISVQCQLEQIRRELRLLNDDRIVRALDSQDPPLSH
Ga0209540_103438262	3300025888	Arctic Peat Soil	MMTAPQGNTIEREVAAETLAAALSPHSVRAIQQRLESILIDDRELLISLQCQLEQIRRELRLLNDERIVHALDGGDPPIRH
Ga0209540_105997871	3300025888	Arctic Peat Soil	MLHPTAACRTAQACGHGSSTERGVAAETPAAAMSPPSMKSIQRRLKRILIDDRELLISLQCQLEQIRRELRLLDDERMAHTPDGNDPPIRH
Ga0209777_1000046234	3300027896	Freshwater Lake Sediment	MMPGSTRDGLEREVAAEVLAAALSPLSVRSIQRRLERILLDDRELLISLQCQLEQIRRELRLLNDERIVRGLDGGDSSLRH
Ga0265337_10076632	3300028556	Rhizosphere	MEKQIAAETLAATMSPISVRSIQRRLERLLIDDRELLISLQCQLEQIRRELRLLNDERIVRALDGGEPSFRH
Ga0265337_11898862	3300028556	Rhizosphere	MITGGRDGTMARRVAAETLAAVLSPLSMRSVQQRLEKILIDDRELLISLQCQLEQIRRELRLLNDERIVHALDSRDHPIQN
Ga0265337_11986982	3300028556	Rhizosphere	SIERQIAAETMAATLSPLSIRSIQRRLERLLIDDRELLISLQCQLEQIRRELRLLNDERIVRALDGSELPFRH
Ga0265334_100473462	3300028573	Rhizosphere	MMSLPGGTTIEREVAAETLAAALSPLSVRAIQQRLERILLDDRELLISLQCQLEQIRREIRLLNDDRIVQSLDFRDHPLRH
Ga0302162_101215682	3300028649	Fen	MMPSPHGSSIERQVAAETLSAALSPLSVRAIQHRLERILLDDRELLISLQCQLEQIRRELRLLNDDRIVRALEDVERPISH
Ga0302166_100166982	3300028652	Fen	MMPGTQKTTMEREVAAETLAAALSPLSVRSIQRRLERLLLDDRELLISLQCQLEQIRRELRLLNDERIVRALGSQDPPLSH
Ga0265323_101051952	3300028653	Rhizosphere	MMPIPSGNSIEREVAAETLAAALSPLSVRAIQQRLERLLIDDRELLISLQCQLEQIRRELRLLNDERIVRALDGQDHPIRN
Ga0265322_101539332	3300028654	Rhizosphere	MMSLPGGTTIEREVAAETLAAALSPLSVRAIQQRLERILLDDRELLISLQCQLEQIRREIRLLNDDRIVRALDFQDHPLRH
Ga0265336_101168251	3300028666	Rhizosphere	MEKQIAAETLAATMSPISVRSIQRRLERLLIDDRELLISLQCQLEQIRRELRLLNDERIVRALDG
Ga0302161_101626662	3300028674	Fen	MMPGGHPTTMERQVAAETLAAALSPLSVRAIQRRLERILLDDRELLISLQCQLEQIRRELRLLNDERIVSALGGIDPPISH
Ga0302264_10178991	3300028732	Fen	HGSSIERQVAAETLSAALSPLSVRAIQHRLERILLDDRELLISLQCQLEQIRRELRLLNDDRIVRALEDVERPISH
Ga0302256_100339252	3300028741	Fen	MMPGGHPTTMERQVAAETLAAALSPLSVRAIQRRLERILLDDRELLISLQCQLEQIRRELRLLNDERIVTALGATDPPISH
Ga0265338_108791921	3300028800	Rhizosphere	GWRGTAMMSLPGGTTIEREVAAETLAAALSPLSVRAIQQRLERILLDDRELLISLQCQLEQIRREIRLLNDDRIVRALDFQDHPLRH
Ga0265338_109403742	3300028800	Rhizosphere	MMPAEREGAVERAVAAETLAASLSPLSVRAIQRRLERILIDDRELLISLQCQLEQIRRELRLLNDERIVHALDSRDHPIQN
Ga0302291_103481282	3300028865	Fen	MMAGGHPTTMERQVAAETLAAALSPLSVRAIQRRLERILLDDRELLISLQCQLEQIRRELRLLNDERIVTALGGSDPPISH
Ga0302263_101506913	3300028869	Fen	AAETLAAALSPLSVRAIQRRLERILLDDRELLISLQCQLEQIRRELRLLNDERIVTALGGSDPPISH
Ga0265324_102178082	3300029957	Rhizosphere	DRSNMEREVASEMLVAAMSPLSARSIQQRLERILINDRELLISLQCQLEQIRRELRLLNDDRIVRVLSRDDRPISN
Ga0311332_106062921	3300029984	Fen	MMPGPRGSSIERAVAAETLAAALSPLSVRSIQRRLEQILLDDRELLISLQCQLEQIRRELRLLNDDRIVRAIDNLDRPVSH
Ga0311332_110070542	3300029984	Fen	MMPVPQRNTFEREVAAETLAAALSPLSVRAIQQRLERILIDDRELLISLQCQLEQIRRELRLLNDERIVHALDSRDHPIQN
Ga0311336_101253742	3300029990	Fen	MMTAPQSNAIEREVAAETLAAALSPLSVRAIQQRLERILIDDRELLISLQCQLEQIRRELRLLNDDRIVRVLDGQDRPVAN
Ga0302210_102222561	3300029995	Fen	MIPTDMPGTMERQEAAETLAAALSPLSVRSIQRRLERILIDDRELLISLQCQLEQIRRELRLLNDDRIVRALDGEDASYRH
Ga0311350_104489933	3300030002	Fen	MIPTDMPGTMERQVAAETLAAALSPLSVRSIQRRLERILIDDRELLISLQCQLEQIRRELRLLNDDRIVRA
Ga0311348_101433633	3300030019	Fen	MMAGGHPTTMERQVAAETLAAALSPLSVRAIQRRLERILLDDRELLISLQCQLEQIRRELRLLNDERIVTALGGSDP
Ga0302286_101806932	3300030047	Fen	RQVAAETLSAALSPLSVRAIQHRLERILLDDRELLISLQCQLEQIRRELRLLNDDRIVRALEDVERPISH
Ga0302286_104105801	3300030047	Fen	MIPRGLATQSMERQVAAETLAAALSPLSVRAIQQRLERILIDDRELLISLQCQLEQIRRELRLLNDDRIVRALDGG
Ga0311333_100558913	3300030114	Fen	MIPTDMPGTMERQVAAETLAAALSPLSVRSIQRRLERILIDDRELLISLQCQLEQIRRELRLLNDDRIVRALDGEDASYRH
Ga0311333_102280422	3300030114	Fen	MISATESNSMERQIAAETLAATMSPLSVRSIQRRLERLLIDDRELLISLQCQLEQIRRELRLLNDDRIVRALDGGEPPFRH
Ga0311333_109320621	3300030114	Fen	VISPAGPTSIERQIAAETMAATLSPLSIRSIQRRLERLLIDDRELLISLQCQLEQIRRELRLLNDERIVRALD
Ga0311349_113466752	3300030294	Fen	AAETMAATLSPLSIRSIQRRLERLLIDDRELLISLQCQLEQIRRELRLLNDERIVRALDGSEMPFRH
Ga0311349_117297072	3300030294	Fen	MMSAPRGRVMEREVAAETLAAALSPLSARAIQQRLERILIDDRELLISLQCQLEQIRRELRLLNDDRIVRGLDGSDHPVRN
Ga0311349_119079491	3300030294	Fen	MIPRGLATQSMERQVAAETLAAALSPLSVRAIQQRLERILIDDRELLISLQCQLEQIRRELRLLNDDRIVR
Ga0311360_110097272	3300030339	Bog	MISATEPNSMERQIAAETLAATMSPLSVRSIQRRLERLLIDDRELLISLQCQLEQIRRELRLLNDDRIVRALDG
Ga0311335_106669912	3300030838	Fen	ETLAAALSPLSVRSIQRRLERILIDDRELLISLQCQLEQIRRELRLLNDDRIVRALDGEDASYRH
Ga0311366_114244711	3300030943	Fen	VISPTGSNSIERQIAAETMAATVSPLSIRSIQRRLERLLIDDRELLISLQCQLEQIRRELRLLNDERIVRALDGSEAPFRH
Ga0302323_1001507713	3300031232	Fen	MISATEPNSMERQIAAETLAATMSPLSVRSIQRRLERLLIDDRELLISLQCQLEQIRRELRLLNDDRIVRALDGGEPPFRH
Ga0302323_1010145231	3300031232	Fen	RVDRLAAVGRSGIVRRRGATVISPTGSNSIERQIAAETMAATLSPLSIRSIQRRLERLLIDDRELLISLQCQLEQIRRELRLLNDERIVRALDGSEMPFRH
Ga0302323_1014306571	3300031232	Fen	MIPGGRPTSMERQVAAETLAAALSPFSVRSIQRRLERILIDDRELLISLQCQLEQIRRELRLLNDERICTALDGGDPPIRH
Ga0265330_103331232	3300031235	Rhizosphere	MMPAQPGTTIERQVAAETLAASLSPLSVRSIQRRLERILIDDRELLISLQCQLEQIRREIRLLNDERIVRALDTGDHPISH
Ga0265332_104236921	3300031238	Rhizosphere	MMPRPDRSNMEREVASEMLVAAMSPLSARSIQQRLERILINDRELLISLQCQLEQIRRELRLLNDDRIVRVLSR
Ga0265329_101251452	3300031242	Rhizosphere	MMPRPDRSNMEREVASEMLVAAMSPLSARSIQQRLERILINDRELLISLQCQLEQIRRELRLLNDDRIVRVLSRDDRPISN
Ga0265316_109364322	3300031344	Rhizosphere	MISPGRPEAFERQVAAETLAASLSPISVRSIQQRLERLLIDDRELLISLQCQLEQIRREIRLLNDERIVNALGSDDSQLRH
Ga0311364_112463771	3300031521	Fen	MIPRGLATQSMERQVAAETLAAALSPLSVRAIQQRLERILIDDRELLISLQCQLEQIRRELRLLNDDRIVRALDGGDQPIRH
Ga0311364_118004672	3300031521	Fen	MMSGSQSRTIEREVAAETLASAMSSPLSARAIQQRLERILIDDRELLISLQCQLEQIRRELRLLNDDRIVRSLDGSDHPVRN
Ga0311351_103822671	3300031722	Fen	PSPHGSSIERQVAAETLSAALSPLSVRAIQHRLERILLDDRELLISLQCQLEQIRRELRLLNDDRIVRALEDVERPISH
Ga0311351_104255662	3300031722	Fen	MMPGTQQTTMEREVAAETLAAALSPLSVRSIQRRLERLLLDDRELLISLQCQLEQIRRELRLLNDERIVRALGSQDPPLSH
Ga0311351_115525562	3300031722	Fen	MMPASRGNSMEREVAAETLAASLSPLSARTIQHRLERILIDDRELLISLQCQLEQIRRELRLLNDDRIVRVLDGQDQPVSN
Ga0302321_1012420492	3300031726	Fen	PTDMPGTMERQVAAETLAAALSPLSVRSIQRRLERILIDDRELLISLQCQLEQIRRELRLLNDDRIVRALDGEDASYRH
Ga0302322_1007089781	3300031902	Fen	MMSAPRGRMIEREVAAETLAAALSPLSARAIQQRLERILIDDRELLISLQCQLEQIRRELRLLNDERIVRALDYQDHPIRN
Ga0311367_101632201	3300031918	Fen	ASRSGIVRGRGPTMISATEPNSMERQIAAETLAATMSPLSVRSIQRRLERLLIDDRELLISLQCQLEQIRRELRLLNDDRIVRALDGGEPPFRH
Ga0311367_108604342	3300031918	Fen	MMPGTQQTTIEREVAAETLAAALSPLSVRSIQRRLERLLLDDRELLISLQCQLEQIRRELRLLNDERIVRALGSQDPPLSH
Ga0311367_111743101	3300031918	Fen	MMTVPQGNALEREVAAETLAAALSPLSVRAIQQRLERILIDDRELLISLQCQLEQIRRELRILNDDRIVRVLDGQDRPVAN
Ga0311367_116941361	3300031918	Fen	FGRPSMIPGGRPTSMERQVAAETLAAALSPFSVRSIQRRLERILIDDRELLISLQCQLEQIRRELRLLNDERICTALDGGDPPIRH
Ga0335085_103312534	3300032770	Soil	MIPGSRPVSMERQVAAETLAAALSPISIRSGQRRLERILIDDRELLISLQCQLEQIRRELRLLNDERIVRGLGADEEPPLTH
Ga0335080_118956142	3300032828	Soil	QIAAETLAAAASPLSVRSIQQRLERILIDDRELLISLQCQLEQIRRELHLLNDDRIVRSLDGQDHPIRH
Ga0335070_105047292	3300032829	Soil	MNPGSRPTLVERQIAAETLAAARSSLSVRSIQRRLESLLLDDRELLISLQCQLDQIRRELRLLNDDRIVRAIEGEDRPLRH
Ga0335069_109430831	3300032893	Soil	MIPGGRPGTMEHRIATETIAAAMSSLSMRSVQQRLERILIDDRELLISLQCQLEQIRREIRLLNDERIVRSLGDEDSTIRH
Ga0335071_105338782	3300032897	Soil	MIPREVSMMERQVAAETLAAALSPLSVRSIQRRLERILIDDRELLISLQCQLEQIRRELRLLNDERIVRALDGDEPQIRH
Ga0335071_105573122	3300032897	Soil	MIPTPTPMEHLVATETLAAALSPLSARAVQQRLERLLIDDRELLISVQCQLEQIRRELRLLNDERITRALDFGDAPIRH
Ga0335076_100201584	3300032955	Soil	MMPAAERTRIEREIATETLAAALSPLSVRSIHQRLERILLDDRELLISLQCQLEQIRRELRLLNDDRIVRALSREDQPISH
Ga0335076_103813472	3300032955	Soil	MMPSPGNQTIARQIAAETLAAAASPLSVRSIQQRLERILIDDRELLISLQCQLEQIRRELHLLNDDRIVRSLDGQDHPIRH
Ga0335084_124660652	3300033004	Soil	MMPVVPHGSAIEREVAAETLAAALSPLSVRAIQQRLERILLDDRELLIALQCQLEQIRRELRLLNDDRIVRALDIQDPPLRH
Ga0326726_116675672	3300033433	Peat Soil	MIPGAHYSQMERQVAAETLAAALSPLSVRAIQRRLERLLIDDRELLISLQCQLEQIRRELRLLNDERIVHALDGGDPPIRH
Ga0316624_100189533	3300033486	Soil	MERQIAAETLAAAMSPLSMRSVQARLERILIDDRELLISLQCQLEQIRRELRLLNDDRIVRALDGEEAPIRH
Ga0299912_102207173	3300033489	Soil	MIAAGRPSSMERPPAPETLAAALRPPSAKAIKKRLERILIDDRELLISTQCQLEQIRRARRSPNDEGIVRAPDGVDPQIRH
Ga0334844_028602_619_864	3300033743	Soil	MMPAPRASTIEREVAAETLAAALSPLSVRAIQQRLERILIDDRELLISLQCQLEQIRRELRLLNDERIVRALDAGDHPIRN
Ga0334817_000901_2893_3138	3300033820	Soil	MMPAPQANHIERQIAAETLAAALSPLSVRAIQRRLERILIDDRELLISLQCQLEQIRRELRLLNDDRILRVLDGQDRPISN
Ga0334817_100515_226_471	3300033820	Soil	MMPFPQQSKIEREVAAETLAAALSPLSVRAIQQRLERILIDDRELLISLQCQLEQIRRELRLLNDERIVRALAPGDHPISH
Ga0334818_000144_12369_12614	3300033821	Soil	MMPAPHGSTIEREVAAETLAAALSPLSVRAIQHRLERILLDDRELLISLQCQLEQIRRELRLLNDDRIVRAIDGGDRPLRH
Ga0334843_000342_1611_1856	3300033825	Soil	MMPSPNGSSIERQVAAETLSAALSPLSVRAIQHRLERILLDDRELLISLQCQLEQIRRELRLLNDDRIVRALEDVERPISH
Ga0334843_064402_251_496	3300033825	Soil	MMPAEREGAIERAVAAETLAAALSPLSVRAIQRRLERILIDDRELLISLQCQLEQIRRELRLLNDERIVRALDAGDHPIRN
Ga0334848_000078_22895_23140	3300033827	Soil	MMTETATTAIDRQVAAETLSAALGPLPVRTIQARLERILLDDRELLISLQCQLEQIRRELRLLNDDRIVRALDDVERQISH
Ga0334848_098048_2_238	3300033827	Soil	MMPSPNGSSIERQVAAETLSAALSPLSVRAIQHRLERILLDDRELLISLQCQLEQIRRELRLLNDDRIVRALEDVERPI
Ga0334811_143446_2_223	3300033891	Soil	TIEREVAAETLAAALSPLSVRAIQQRLERILIDDRELLISLQCQLEQIRRELRLLNDERIVRALDAGDHPIRN
Ga0334811_181378_62_307	3300033891	Soil	MPAPQQGSRMQQAVAAETLAAALSPLSVRAIQQRLERILLDDRELLISLQCQLEQIRRELRLLNDDRIVRVLDVQDRPISH
Ga0370507_0196804_194_439	3300034158	Untreated Peat Soil	MIPADMPGTMERRVAAETLAAALSPLSVRSIQQRLERILIDDRELLISLQCQLEQIRRELRLLNDDRIVRALDGEDPAFRH
Ga0370487_0351989_215_460	3300034170	Untreated Peat Soil	MMPSPNGTSIERQVAAETLSAALSPLSVRAIQHRLERILLDDRELLISLQCQLEQIRRELRLLNDDRIVRALEDVERPISH
Ga0370501_0003466_142_387	3300034195	Untreated Peat Soil	MMPGPQGSSIERAVAAETLAAALSPLSVRSIQRRLERILLDDRELLISLQCQLEQIRRELRLLNDDRIVRAIDNVDRPVSN
Ga0370501_0004281_1261_1506	3300034195	Untreated Peat Soil	MMPVPARTTIEREVAAETLAAALSPLSVRAIQQRLERILLDDRELLISLQCQLEQIRREIRLLNDDRILQSLDYRDHPLRH
Ga0370501_0006535_2814_3056	3300034195	Untreated Peat Soil	MPGPQGSSIERAVAAETLAAALSPLSVRSIQRRLERILLDDRELLISLQCQLEQIRRELRLLNDDRIVRAIDNVDRPVSN
Ga0370501_0018083_508_726	3300034195	Untreated Peat Soil	MEREVAAETLAAALSPLSVRSIQRRLERLLLDDRELLISLQCQLEQIRRELRLLNDERIVRALGSQDPPLSH
Ga0370501_0316732_159_404	3300034195	Untreated Peat Soil	MISATESSSMERQIAAETLAATMSPLSVRSIQRRLERLLIDDRELLISLQCQLEQIRRELRLLNDDRIVRALDGGELPFRH
Ga0370501_0337239_303_545	3300034195	Untreated Peat Soil	MPASQANHMERQVAAETLAAALSPLSVRAIQQRLERILIDDRELLISLQCQLEQIRRELRLLNDDRIVRVLDGQDRPISN
Ga0370501_0351690_1_213	3300034195	Untreated Peat Soil	REVAAETLAAALSPLSVRAIQQRLERILIDDRELLISLQCQLEQIRRELRLLNDERIVRALDYQDHPIRN
Ga0370485_0065165_489_734	3300034358	Untreated Peat Soil	MMPVPQGNALEREVAAETLAAALSPLSVRAIQRRLERILIDDRELLISLQCQLEQIRRELRLLNDDRIVRVLDGQDRPISN

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F057831

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences